Metagenome / Metatranscriptome Family F063107

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063107
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	64 residues
Representative Sequence	MVAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF
Number of Associated Samples	117
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.38 %
% of genes near scaffold ends (potentially truncated)	23.08 %
% of genes from short scaffolds (< 2000 bps)	96.92 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.923 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.077 % of family members)
Environment Ontology (ENVO)	Unclassified (34.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (55.385 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.23% β-sheet: 0.00% Coil/Unstructured: 96.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF01548	DEDD_Tnp_IS110	50.00
PF02371	Transposase_20	13.08
PF01297	ZnuA	0.77
PF13551	HTH_29	0.77
PF13586	DDE_Tnp_1_2	0.77
PF13340	DUF4096	0.77
PF12697	Abhydrolase_6	0.77
PF01527	HTH_Tnp_1	0.77
PF00872	Transposase_mut	0.77
PF03625	DUF302	0.77
PF01726	LexA_DNA_bind	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	63.08
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.77
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.92 %
Unclassified	root	N/A	13.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.92 %
Unclassified	root	N/A	13.08 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.92 %
Unclassified	root	N/A	13.08 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.92 %
Unclassified	root	N/A	13.08 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	45.38 %
Unclassified	root	N/A	13.08 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	12.31 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.77 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	40.00 %
Unclassified	root	N/A	13.08 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	12.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.54 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.77 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.77 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.77 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.77 %

Name	Rank	Taxonomy	Distribution
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	36.15 %
Unclassified	root	N/A	13.08 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	12.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.77 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.77 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.77 %
Halothiobacillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Halothiobacillaceae	0.77 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.77 %

Name	Rank	Taxonomy	Distribution
Skermanella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella	36.15 %
Unclassified	root	N/A	13.08 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	12.31 %
unclassified Halothiobacillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Halothiobacillaceae → unclassified Halothiobacillaceae	0.77 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.77 %
Jannaschia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia	0.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Skermanella mucosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	36.15 %
Unclassified	root	N/A	13.08 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	12.31 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	0.77 %
Halothiobacillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Halothiobacillaceae → unclassified Halothiobacillaceae → Halothiobacillaceae bacterium	0.77 %
Jannaschia seosinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia → Jannaschia seosinensis	0.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Skermanella mucosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	36.15 %
Unclassified	root	N/A	13.08 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	12.31 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.77 %
Halothiobacillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Halothiobacillaceae → unclassified Halothiobacillaceae → Halothiobacillaceae bacterium	0.77 %
Jannaschia seosinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia → Jannaschia seosinensis	0.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Skermanella mucosa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	36.15 %
Unclassified	root	N/A	13.08 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	12.31 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	0.77 %
Halothiobacillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Halothiobacillaceae → unclassified Halothiobacillaceae → Halothiobacillaceae bacterium	0.77 %
Jannaschia seosinensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia → Jannaschia seosinensis	0.77 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.77 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001305\|C688J14111_10032649	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1552	Open in IMG/M
3300001475\|JGI12361J15250_1000688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1603	Open in IMG/M
3300002568\|C688J35102_118259106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	543	Open in IMG/M
3300002568\|C688J35102_119063030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	633	Open in IMG/M
3300003368\|JGI26340J50214_10056355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	1074	Open in IMG/M
3300004480\|Ga0062592_101958206	Not Available	578	Open in IMG/M
3300004633\|Ga0066395_10245689	All Organisms → cellular organisms → Bacteria	958	Open in IMG/M
3300005174\|Ga0066680_10769221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	583	Open in IMG/M
3300005293\|Ga0065715_10154080	All Organisms → cellular organisms → Bacteria → Proteobacteria	1686	Open in IMG/M
3300005329\|Ga0070683_101410107	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300005331\|Ga0070670_100532711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	1047	Open in IMG/M
3300005331\|Ga0070670_101293025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	668	Open in IMG/M
3300005335\|Ga0070666_10509697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	873	Open in IMG/M
3300005337\|Ga0070682_101859496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	527	Open in IMG/M
3300005338\|Ga0068868_101192839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	704	Open in IMG/M
3300005338\|Ga0068868_101225799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	694	Open in IMG/M
3300005339\|Ga0070660_100448967	Not Available	1070	Open in IMG/M
3300005344\|Ga0070661_100699832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	826	Open in IMG/M
3300005366\|Ga0070659_101567872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	588	Open in IMG/M
3300005437\|Ga0070710_10508595	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300005438\|Ga0070701_10554084	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005444\|Ga0070694_100985548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	699	Open in IMG/M
3300005456\|Ga0070678_101724869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	590	Open in IMG/M
3300005507\|Ga0074259_10321868	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005534\|Ga0070735_10140737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1500	Open in IMG/M
3300005546\|Ga0070696_101213604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	638	Open in IMG/M
3300005578\|Ga0068854_100684980	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300005618\|Ga0068864_100396101	All Organisms → cellular organisms → Bacteria → Proteobacteria	1311	Open in IMG/M
3300005718\|Ga0068866_10269269	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300005764\|Ga0066903_106963331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Halothiobacillaceae → unclassified Halothiobacillaceae → Halothiobacillaceae bacterium	587	Open in IMG/M
3300005834\|Ga0068851_10273683	All Organisms → cellular organisms → Bacteria → Proteobacteria	964	Open in IMG/M
3300005843\|Ga0068860_100368341	Not Available	1416	Open in IMG/M
3300006028\|Ga0070717_12167745	Not Available	500	Open in IMG/M
3300006052\|Ga0075029_100117527	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1610	Open in IMG/M
3300006163\|Ga0070715_10759817	Not Available	585	Open in IMG/M
3300006237\|Ga0097621_101609593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	617	Open in IMG/M
3300006358\|Ga0068871_101377207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	665	Open in IMG/M
3300006806\|Ga0079220_10540720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300006806\|Ga0079220_11294879	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300006871\|Ga0075434_101141743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	792	Open in IMG/M
3300006954\|Ga0079219_10187376	Not Available	1156	Open in IMG/M
3300006954\|Ga0079219_12039862	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300007004\|Ga0079218_13960093	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300009011\|Ga0105251_10273424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	763	Open in IMG/M
3300009011\|Ga0105251_10381639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	646	Open in IMG/M
3300009092\|Ga0105250_10057921	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1555	Open in IMG/M
3300009137\|Ga0066709_103497876	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300009156\|Ga0111538_12481227	Not Available	650	Open in IMG/M
3300009156\|Ga0111538_13215273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	569	Open in IMG/M
3300009545\|Ga0105237_11824286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	616	Open in IMG/M
3300009551\|Ga0105238_10940373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	884	Open in IMG/M
3300009840\|Ga0126313_10723020	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300010036\|Ga0126305_11258786	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300010038\|Ga0126315_10089669	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300010039\|Ga0126309_10316342	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300010044\|Ga0126310_10360582	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300010044\|Ga0126310_11591168	Not Available	539	Open in IMG/M
3300010044\|Ga0126310_11632754	Not Available	533	Open in IMG/M
3300010048\|Ga0126373_10813865	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	996	Open in IMG/M
3300010166\|Ga0126306_11292123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	602	Open in IMG/M
3300010371\|Ga0134125_10687497	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1129	Open in IMG/M
3300010379\|Ga0136449_100977399	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300010396\|Ga0134126_10825890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Jannaschia → Jannaschia seosinensis	1046	Open in IMG/M
3300010398\|Ga0126383_10840066	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300010403\|Ga0134123_11424334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	734	Open in IMG/M
3300012212\|Ga0150985_111070683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	626	Open in IMG/M
3300012212\|Ga0150985_119254945	Not Available	888	Open in IMG/M
3300012469\|Ga0150984_114977236	Not Available	520	Open in IMG/M
3300012473\|Ga0157340_1007575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	707	Open in IMG/M
3300012487\|Ga0157321_1029122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	553	Open in IMG/M
3300012511\|Ga0157332_1008742	All Organisms → cellular organisms → Bacteria → Proteobacteria	969	Open in IMG/M
3300012896\|Ga0157303_10027148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	1023	Open in IMG/M
3300012903\|Ga0157289_10256659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	598	Open in IMG/M
3300012910\|Ga0157308_10209908	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300012958\|Ga0164299_10094416	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1538	Open in IMG/M
3300012958\|Ga0164299_11327106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300012986\|Ga0164304_10403534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	972	Open in IMG/M
3300013096\|Ga0157307_1047164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	796	Open in IMG/M
3300013296\|Ga0157374_10147922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	2282	Open in IMG/M
3300013297\|Ga0157378_12372294	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300013306\|Ga0163162_12589397	Not Available	584	Open in IMG/M
3300014487\|Ga0182000_10260295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	701	Open in IMG/M
3300014745\|Ga0157377_11505011	Not Available	535	Open in IMG/M
3300014968\|Ga0157379_11849184	Not Available	594	Open in IMG/M
3300015201\|Ga0173478_10183777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	862	Open in IMG/M
3300015265\|Ga0182005_1275953	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300015373\|Ga0132257_102349784	Not Available	691	Open in IMG/M
3300017936\|Ga0187821_10327876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	613	Open in IMG/M
3300018465\|Ga0190269_10857270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	663	Open in IMG/M
3300018466\|Ga0190268_10341486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	926	Open in IMG/M
3300018466\|Ga0190268_11666079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	566	Open in IMG/M
3300018476\|Ga0190274_11008912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	907	Open in IMG/M
3300019377\|Ga0190264_11406465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300019767\|Ga0190267_11191158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	557	Open in IMG/M
3300021184\|Ga0196959_10121358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	618	Open in IMG/M
3300021560\|Ga0126371_12147053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	673	Open in IMG/M
3300024430\|Ga0196962_10190788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	658	Open in IMG/M
3300025315\|Ga0207697_10424951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	590	Open in IMG/M
3300025321\|Ga0207656_10196027	All Organisms → cellular organisms → Bacteria → Proteobacteria	974	Open in IMG/M
3300025909\|Ga0207705_10354607	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1130	Open in IMG/M
3300025914\|Ga0207671_10175287	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1666	Open in IMG/M
3300025916\|Ga0207663_10931672	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300025920\|Ga0207649_10341621	All Organisms → cellular organisms → Bacteria → Proteobacteria	1105	Open in IMG/M
3300025923\|Ga0207681_10139132	All Organisms → cellular organisms → Bacteria → Proteobacteria	1806	Open in IMG/M
3300025925\|Ga0207650_10856879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	771	Open in IMG/M
3300025926\|Ga0207659_10178137	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1682	Open in IMG/M
3300025927\|Ga0207687_11241182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	641	Open in IMG/M
3300025931\|Ga0207644_11801534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	512	Open in IMG/M
3300025939\|Ga0207665_10884044	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300025942\|Ga0207689_10970259	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300025949\|Ga0207667_10993395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	827	Open in IMG/M
3300026067\|Ga0207678_10109433	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	2357	Open in IMG/M
3300026075\|Ga0207708_10498445	All Organisms → cellular organisms → Bacteria	1020	Open in IMG/M
3300026089\|Ga0207648_10610490	All Organisms → cellular organisms → Bacteria → Proteobacteria	1006	Open in IMG/M
3300026116\|Ga0207674_10453203	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300027750\|Ga0209461_10189522	Not Available	519	Open in IMG/M
3300027765\|Ga0209073_10373348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	580	Open in IMG/M
3300027809\|Ga0209574_10044955	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1106	Open in IMG/M
3300027812\|Ga0209656_10042812	All Organisms → cellular organisms → Bacteria → Proteobacteria	2608	Open in IMG/M
3300028380\|Ga0268265_10797048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	920	Open in IMG/M
3300028578\|Ga0272482_10055056	Not Available	1059	Open in IMG/M
3300028744\|Ga0307318_10080971	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1089	Open in IMG/M
3300030515\|Ga0268254_10015698	All Organisms → cellular organisms → Bacteria → Proteobacteria	2266	Open in IMG/M
3300031058\|Ga0308189_10079679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	991	Open in IMG/M
3300031754\|Ga0307475_10441125	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1046	Open in IMG/M
3300032001\|Ga0306922_10329376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1639	Open in IMG/M
3300032068\|Ga0318553_10354279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	768	Open in IMG/M
3300034779\|Ga0334945_020365	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1061	Open in IMG/M
3300034779\|Ga0334945_084151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	581	Open in IMG/M
3300034820\|Ga0373959_0065953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Skermanella → Skermanella mucosa	810	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.38%
Host-Associated	Host-Associated	44.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.31%
Plants	Host-Associated → Plants	44.62%
Aquatic	Environmental → Aquatic	3.08%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.69%
Freshwater	Environmental → Aquatic → Freshwater	2.31%
Roots	Host-Associated → Plants → Roots	1.54%
Phylloplane	Host-Associated → Plants → Phylloplane	1.54%
Sediment	Environmental → Aquatic → Sediment	0.77%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.69%
Loam	Environmental → Terrestrial → Soil → Loam	13.08%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.31%
Sand	Environmental → Terrestrial → Soil → Sand	1.54%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.54%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.77%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.77%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.08%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.54%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.54%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.54%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.54%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.54%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.77%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.92%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	6.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.31%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.54%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.54%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.54%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.54%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.54%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.54%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.54%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.77%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.77%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.77%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001475	Forest soil microbial communities from Browns Valley, California, USA, that are Nitrogen fertilized - NN102	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005507	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012473	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610	Host-Associated	Open in IMG/M
3300012487	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510	Host-Associated	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021184	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028578	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT160D0	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300030515	Agave microbial communities from Guanajuato, Mexico - Or.Sf.rz (v2)	Host-Associated	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300034779	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 41SMS	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J14111_100326492	3300001305	Soil	SSQAARGRAPLWLKMMAAQAGLSEPWIGDRVEAGSFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLXPTCGVTVAF*
JGI12361J15250_10006882	3300001475	Soil	MVAARAGLSEFPIGDRVEADTFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDPTCGVTVAF*
C688J35102_1182591062	3300002568	Soil	MMAARAALSEPGIGDRVEAEAFWVAYDPDKQSGPRCIEVLFFVALGNGEHAWQCLDPTCGVTVAF*
C688J35102_1190630301	3300002568	Soil	MKMVAAPAGLSEPWIGDRVEADQFWVAFDPNKQSGPRCMEVLFFVAPGNGEHVWQCLELTCGVTVAF*
JGI26340J50214_100563552	3300003368	Bog Forest Soil	MAAARAVLAEPLDGDRVEADISAVASDPDKQSGPRCIEVPFFVAPGNGEHAWQCLDRTCGVAVVL*
Ga0062592_1019582061	3300004480	Soil	MVVRAGLSEPGIGDRVEAGSFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLE
Ga0066395_102456892	3300004633	Tropical Forest Soil	MVWRREPVCRSLATGDRGEADKSAVVRNPEWQSGPRCIEVPFFVALGNGEHAWQCLERTCSVTVAF*
Ga0066680_107692211	3300005174	Soil	MVAARAGLSEFPIGDCVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0065715_101540801	3300005293	Miscanthus Rhizosphere	GLSEPGTGDRVEAEAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDLTCGVTVAF*
Ga0070683_1014101072	3300005329	Corn Rhizosphere	MIENGGGVGRFAEPGTGDRVEAEAFWVAFDPDKQSGPRCVEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0070670_1005327112	3300005331	Switchgrass Rhizosphere	MVAAQAGLSELPIGDRVEAEAFWVASDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDLTCGVTVAF*
Ga0070670_1012930251	3300005331	Switchgrass Rhizosphere	LWLKMMAARAGLSEPGIGDRVEAGSFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0070666_105096971	3300005335	Switchgrass Rhizosphere	MMAARAGLSEPWLGDRVEAGSFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0070682_1018594961	3300005337	Corn Rhizosphere	GLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0068868_1011928392	3300005338	Miscanthus Rhizosphere	AARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0068868_1012257991	3300005338	Miscanthus Rhizosphere	MVAARAGLSEFPIGDRVEADTFWVAVDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDLTCGVTVAF*
Ga0070660_1004489671	3300005339	Corn Rhizosphere	MVAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIKVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0070661_1006998322	3300005344	Corn Rhizosphere	MMAARAALSEPGIGDRVEAEAFWVAYDPDKQSGPRCIEVLFFVALGNGEHVWQCLELTCGVTVAF*
Ga0070659_1015678722	3300005366	Corn Rhizosphere	MMAARAGLSEPGIGDRVEAGSFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAS*
Ga0070710_105085953	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAARAGLPEPWIGDRVEADQFWVAFDPDKQSGPRCVEVLFFVAPGNGEHLWQCLELTCGVTVAF*
Ga0070701_105540842	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LSEPGTGDRVEAEAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDLTCGVTVAF*
Ga0070694_1009855481	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LSEPGTGDRVEAEAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0070678_1017248692	3300005456	Miscanthus Rhizosphere	MIENGGGVGGLSEPGTGDRVEAEAFWVAFDPDKQSGPRCVEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0074259_103218681	3300005507	Arabidopsis Rhizosphere	LSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHLWQCLELTCGVTVAF*
Ga0070735_101407372	3300005534	Surface Soil	MVAARAVLAGLSTDDRVEADISAVVSDPDKQSGPRCIEVPFFVAPGNGEHAWQCLDRTCGVAVVL*
Ga0070696_1012136041	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MMATRAGLSEPGIGDRVEAGSFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0068854_1006849802	3300005578	Corn Rhizosphere	MRAVQAGLSEPGIGDRVEADQFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0068864_1003961012	3300005618	Switchgrass Rhizosphere	MMAARAGLSEPGIGDRVEAGSFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0068866_102692691	3300005718	Miscanthus Rhizosphere	MVAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVA
Ga0066903_1069633311	3300005764	Tropical Forest Soil	MKMVAARAGLSQPHDGDRVEAERSSVASDPVKESGPRCAEVPFFVAPGNREHAWQYLIVPAASRSP
Ga0068851_102736832	3300005834	Corn Rhizosphere	MAARAALSEPGIGDRVEAEAFWVAYDPDKQSGPRCIEVLFFVALGNGEHAWQCLDPTCGVTVAF*
Ga0068860_1003683412	3300005843	Switchgrass Rhizosphere	MMAARAGLSEPGIGDRVEAGSFWVAFDPDKQSGPRRTEVLFFVAPGNGEHLWQCLELTCGVTVAF*
Ga0070717_121677452	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MVAAQAGLSEPWIGDCVEADQFWVACDPDKQSGPRCREALFFVAPEDEEHLWQCLELTCGVTVAF*
Ga0075029_1001175272	3300006052	Watersheds	MVATRAELSEPAAGDRVEADISAVARDPDKQSGPRCVEVPFFVAPGNGEHAWQCLERTCSVTVAF*
Ga0070715_107598172	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MVAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAS*
Ga0097621_1016095932	3300006237	Miscanthus Rhizosphere	GLSEFPIGDRVEADAFWVAFDPDKQSGPRCIKVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0068871_1013772071	3300006358	Miscanthus Rhizosphere	MVAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDPTCGVAVAF*
Ga0079220_105407201	3300006806	Agricultural Soil	MKMVAARVGLSEPPIGDRVEADAFWVTFDPDKQSGSRCIEVLFFVAPGLCRPGNGEHVWQCLEL
Ga0079220_112948792	3300006806	Agricultural Soil	MVAAQAGLSELPIGDRVEAEAFWVASDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTIASEEGRRGCKHSSS
Ga0075434_1011417432	3300006871	Populus Rhizosphere	MVAAQAGLSELPIGDRVEAEAFWVASDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0079219_101873762	3300006954	Agricultural Soil	MKMVAARVGLSEPPIGDRVEADAFWVAFDPDKQSGPRCLEVLFFVAPGNGEHVWQCLDLTCGVTVAF*
Ga0079219_120398621	3300006954	Agricultural Soil	MVAPPVGLSEPWIGDRVEADTFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDPTCGVTVAF*
Ga0079218_139600932	3300007004	Agricultural Soil	LSEPGIGDRVEADTFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDPTCGVTVAF*
Ga0105251_102734241	3300009011	Switchgrass Rhizosphere	MVAAQAGLSELPIGDRVEAEAFWVASDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELT
Ga0105251_103816392	3300009011	Switchgrass Rhizosphere	MVAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0105250_100579211	3300009092	Switchgrass Rhizosphere	MMAARAALSEPGIGDRVEAEAFWVAYDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDLTCGVTVAF*
Ga0066709_1034978762	3300009137	Grasslands Soil	MVAAPAGLSEPPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDPTCGVTVAF*
Ga0111538_124812271	3300009156	Populus Rhizosphere	MVAAWGGLSEPGTGDRVEAEAFWVAFDPDKQSGPRCVEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0111538_132152731	3300009156	Populus Rhizosphere	MVAARAGLSEFSIGDRVEADTFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0105237_118242861	3300009545	Corn Rhizosphere	ARAALSEPGIGDRVEAEAFWVAYDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0105238_109403732	3300009551	Corn Rhizosphere	MMEARAGLSEPGIGDRVEADTFWVAFDPDKQSGPRCVEVLFFVAPGNGEHLWQCLELTCGVTVAF*
Ga0126313_107230202	3300009840	Serpentine Soil	MVAAQAGLSEPGIGDRVEADQFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDPTCGVTVAF*
Ga0126305_112587862	3300010036	Serpentine Soil	VTDQIGDRVEAGKFWVAFDPNKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0126315_100896692	3300010038	Serpentine Soil	MVAAQAGLSEPGIGDRVEADQFWVAYDPDKQSGPRCLEVLFFVAPGNGERVWQCLDPTCGVTVAF*
Ga0126309_103163421	3300010039	Serpentine Soil	MVALQAGLSEPWIGDRVEAGKFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0126310_103605823	3300010044	Serpentine Soil	MVAARAGLSEFPIGDRVEADTFWVAFDPDKQSGPRCIEVLFFVAPGNGEHAWQCLDPTCGVTVAF*
Ga0126310_115911682	3300010044	Serpentine Soil	MKMVAAQAGLSEPWIGDRVEAGKFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLEL
Ga0126310_116327542	3300010044	Serpentine Soil	MKMMAARAGLSQPWIGDRVEADQFWVAYDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDLTCGVTVAF*
Ga0126373_108138652	3300010048	Tropical Forest Soil	KMVAVRAGLSEPHDGDRVEAEPSPVVSDPAQESGPRCLEVPFFIAPGNGEHVWQCLERTCSVTIAA*
Ga0126306_112921231	3300010166	Serpentine Soil	MVAARAGLSEPGIGDRVEADTFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDPTCGVTVAF*
Ga0134125_106874972	3300010371	Terrestrial Soil	MVAAEGGLSEPGTGDRVEAEAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLEPTCGVTVAF*
Ga0136449_1009773993	3300010379	Peatlands Soil	MKMVAARAVFAELSTDDRVEADISAVASDPDKQSVPRCIQVPFFVAPGNGEHAWQCLERTCSVTVAF*
Ga0134126_108258901	3300010396	Terrestrial Soil	MVAAPAGLSEFPIGDRVEADTFWVAFDPDKQSGPRCLEVLFFVAPGNGEHVWQCLDFTCGVT
Ga0126383_108400662	3300010398	Tropical Forest Soil	MQIAVQTGMIEASTGDRVEADYLLVAGDPDVQSGPRRVEVPRFVASGNGEHVWQCLERTCGVTVAPKP*
Ga0134123_114243342	3300010403	Terrestrial Soil	MMAARAALSEPGIGDRVEAEAFWVAYDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0150985_1110706832	3300012212	Avena Fatua Rhizosphere	MVAARAGLSELRIGDRVEADTFWVAFDPDKQSGPRCMEVLFFVAPGNGEHVWQCLDPTCGVTVAF*
Ga0150985_1192549451	3300012212	Avena Fatua Rhizosphere	MMAAQAGLSEPGIGDRVEAGTFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVT
Ga0150984_1149772361	3300012469	Avena Fatua Rhizosphere	MKMVASQAGLSEPWIGDRVEAGKFWVAFDPDKQSGARCIEVLFFVAPGNGEHVWQCLELTCGVTIAF*
Ga0157340_10075752	3300012473	Arabidopsis Rhizosphere	LSELPIGDRVEAEAFWVASDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDPTCGVTVAF*
Ga0157321_10291222	3300012487	Arabidopsis Rhizosphere	MMAVPAGLSEPRVGDRVEAGSFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0157332_10087422	3300012511	Soil	MVAARAGLSEFAIGDGVGADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAS*
Ga0157303_100271481	3300012896	Soil	MVAARAGLSEPGIGDRVEAGSFWVAFDPDKQSGPRCTEVLFFVALGNGEQVWQCLELTCGVTVAF*
Ga0157289_102566592	3300012903	Soil	MVAARAGLSEFPIGDCVEADAFWVAFDPDKQSGPRCIKVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0157308_102099082	3300012910	Soil	MVAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNREHVWQCLELTCGVTVAF*
Ga0164299_100944161	3300012958	Soil	LSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0164299_113271061	3300012958	Soil	MVAAQAGLSELPIGDRVEAEAFWVASDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCG
Ga0164304_104035342	3300012986	Soil	MVAARAGLSEPGIGDRVEAGSFWVAFDPDKQSGPRCVEVLFFVAPENGEHVWQCLELTCGVTVAF*
Ga0157307_10471641	3300013096	Soil	MIAARAGLSEPGIGDRVEAGSFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0157374_101479222	3300013296	Miscanthus Rhizosphere	MVAARAGLSEFPIGDRVEADAFWVAVDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0157378_123722942	3300013297	Miscanthus Rhizosphere	MVAAQAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAS*
Ga0163162_125893971	3300013306	Switchgrass Rhizosphere	MVAARAGLSEPWLGDRVEAGSFWVAFDPDKQSGPRRTEVLFFVALGNGEQVWQCLELT
Ga0182000_102602951	3300014487	Soil	MKMVAARVGLSEPPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGDGEHVWQCLELTCGVTVAF*
Ga0157377_115050111	3300014745	Miscanthus Rhizosphere	MVAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELT
Ga0157379_118491841	3300014968	Switchgrass Rhizosphere	MVVARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0173478_101837772	3300015201	Soil	LSEPGTGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDLTCGVTVAF*
Ga0182005_12759533	3300015265	Rhizosphere	MVAARADLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF*
Ga0132257_1023497842	3300015373	Arabidopsis Rhizosphere	MVAARAGLSEFPIGDCVEADAFWVAFDPDKQSGPRCIKVLFFVAPGNGEHVWQCLDLTCGVTVAF*
Ga0187821_103278762	3300017936	Freshwater Sediment	ACRSLATGDRVEADISAVASDPDKQSGPRCIEVPSFVALGNGEHAWQCLERTCSVTVAF
Ga0190269_108572702	3300018465	Soil	MVAARTGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLEPTCGVTVAF
Ga0190268_103414862	3300018466	Soil	MVAAQTGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLEPTCGVTVAF
Ga0190268_116660792	3300018466	Soil	KMVAAQTGLSEFPIGDRVEADAFWVAFDPDKQSGPRCLEVLFFVAPGHGEHVWQCLDPTCGVTVAF
Ga0190274_110089121	3300018476	Soil	MMAARAGLSEPGIGDRVEAGSFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDLTCGVTVAF
Ga0190264_114064651	3300019377	Soil	LSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPRNGEHVWQCLEPTCGVTVAF
Ga0190267_111911582	3300019767	Soil	MVAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0196959_101213581	3300021184	Soil	MKMVAAQTGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDPICGVTVAF
Ga0126371_121470532	3300021560	Tropical Forest Soil	MQIVWRRAPVCRSLATGDCGPAAKSALARYPEQPSGPRCIEVPFFVALGNGEHAWQCLERTCSVTVAF
Ga0196962_101907882	3300024430	Soil	MKMVAARVGLSEPPIGDRVEADAFWVAFDPDKQSGPRCIKVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0207697_104249511	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	LSEPGTGDRVEAEAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDLTCGVTVAF
Ga0207656_101960272	3300025321	Corn Rhizosphere	MMAARAALSEPGIGDRVEAEAFWVAYDPDKQSGPRCIEVLFFVALGNGEHAWQCLDPTCGVTVAF
Ga0207705_103546072	3300025909	Corn Rhizosphere	MVAARAGLSEPGIGDRVEAGSFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDLTCGVTVAF
Ga0207671_101752872	3300025914	Corn Rhizosphere	MVAAWGGLSEPGTGDRVEAEAFWVAFDPDKQSGPRCVEVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0207663_109316722	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MMAAQAGLSEPWIGDRVEADQFWVACDPDKQSGPRCREALFFVAPEDEEHLWQCLELTCGVTVAF
Ga0207649_103416212	3300025920	Corn Rhizosphere	MMAARAALSEPGIGDRVEAEAFWVAYDPDKQSGPRCIEVLFFVAPGNGEHLWQCLELTCGVTVAF
Ga0207681_101391322	3300025923	Switchgrass Rhizosphere	MMAARAALSEPGIGDRVEAEAFWVAYDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0207650_108568791	3300025925	Switchgrass Rhizosphere	MMAARAGLSEPGIGDRVEAGSFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0207659_101781373	3300025926	Miscanthus Rhizosphere	MVAAQAGLSELPIGDRVEAEAFWVASDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0207687_112411821	3300025927	Miscanthus Rhizosphere	MKMVAARAGLSEPWIGDRVEAGSFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0207644_118015341	3300025931	Switchgrass Rhizosphere	GDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0207665_108840442	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MVAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDPTCGVTVAF
Ga0207689_109702592	3300025942	Miscanthus Rhizosphere	MVAAGAGLSEFAIGDGVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAS
Ga0207667_109933951	3300025949	Corn Rhizosphere	MVAARAGLSEPWLGDRVEADQFWVAFDPDKQSGPRCIEVLFFVALGNGEHAWQCLDPTCGVTVAF
Ga0207678_101094332	3300026067	Corn Rhizosphere	MVAAQAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0207708_104984452	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MVAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIKVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0207648_106104902	3300026089	Miscanthus Rhizosphere	MVAAQAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDLTCGVTVAF
Ga0207674_104532032	3300026116	Corn Rhizosphere	MVAAWGGLFEPGTGDRVEAEAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDLTCGVTVAF
Ga0209461_101895222	3300027750	Agave	MVAAQAGLSEPGTGDRVEAEAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHAWQCLDPTCGVTVAF
Ga0209073_103733481	3300027765	Agricultural Soil	MKMVAARVGLSEPPIGDRVEADAFWVAFDPDKQSGPRCLEVLFFVAPGNGEHVWQCLDPICGATVAF
Ga0209574_100449552	3300027809	Agave	LSEPGTGDRVEAEAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0209656_100428121	3300027812	Bog Forest Soil	RRGPFWPSLSTDDRVEADISAVASDPDKQSGPRCIEVPFFVAPGNGEHAWQCLDRTCGVAVVL
Ga0268265_107970482	3300028380	Switchgrass Rhizosphere	MKMVAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0272482_100550562	3300028578	Soil	MVAAQTGLSEFPIGDRVEADAFWVAFDPDKQSGPRCLEVLFFVAPGNGEHVWQCLEPTCGVTVAF
Ga0307318_100809711	3300028744	Soil	EPGIGDRVEADAFWVAYDPDKQSGPRCIEVLFFVALGNGEHAWQCLDPTCGVTVAF
Ga0268254_100156983	3300030515	Agave	LSELPLGDRVEAEAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0308189_100796792	3300031058	Soil	MMAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAF
Ga0307475_104411251	3300031754	Hardwood Forest Soil	CRSLAAGDRVEADISAVARDPDKQSGPRCVEVPFFVAPGNGEHAWQCLERTCSVTVAF
Ga0306922_103293761	3300032001	Soil	MMEPSTGDRVEADYLLAVSDPDVQSGPRRVEVPRFVASGNGEHVWQCLERTCGVTVAHLPEEGEDAVD
Ga0318553_103542791	3300032068	Soil	VKMGVAARADLSESWQRAAVLRLTDSAVVRDPDKQSGPRCIEVPFFVALGNGEHAWQCLVRTCSVTVAF
Ga0334945_020365_761_958	3300034779	Sub-Biocrust Soil	MVATRAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLQLTCGVTVAF
Ga0334945_084151_60_263	3300034779	Sub-Biocrust Soil	MKMVAARVGLSEPWIGDRVEADTFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLDPTCGVTVAF
Ga0373959_0065953_60_257	3300034820	Rhizosphere Soil	MVAARAGLSEFPIGDRVEADAFWVAFDPDKQSGPRCIEVLFFVAPGNGEHVWQCLELTCGVTVAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063107

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences