Metagenome / Metatranscriptome Family F063108

Basic Information
Family ID	F063108
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	42 residues
Representative Sequence	MCWEIDYKFFAEQKKAQEARIKQEQRAGVIDQLLSDANKQ
Number of Associated Samples	107
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.62 %
% of genes near scaffold ends (potentially truncated)	95.38 %
% of genes from short scaffolds (< 2000 bps)	95.38 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Most Common Taxonomy
Group	Bacteria (83.846 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.000 % of family members)
Environment Ontology (ENVO)	Unclassified (40.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.538 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.94% β-sheet: 0.00% Coil/Unstructured: 47.06%
Feature Viewer

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Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF00753	Lactamase_B	6.15
PF00106	adh_short	2.31
PF04389	Peptidase_M28	2.31
PF01521	Fe-S_biosyn	2.31
PF01329	Pterin_4a	1.54
PF13460	NAD_binding_10	1.54
PF01266	DAO	1.54
PF00536	SAM_1	1.54
PF03401	TctC	0.77
PF00912	Transgly	0.77
PF04392	ABC_sub_bind	0.77
PF12071	DUF3551	0.77
PF01979	Amidohydro_1	0.77
PF01741	MscL	0.77
PF13602	ADH_zinc_N_2	0.77
PF00578	AhpC-TSA	0.77
PF07681	DoxX	0.77
PF02566	OsmC	0.77
PF02586	SRAP	0.77
PF00271	Helicase_C	0.77
PF02954	HTH_8	0.77
PF01048	PNP_UDP_1	0.77
PF07969	Amidohydro_3	0.77
PF00313	CSD	0.77
PF01027	Bax1-I	0.77
PF01653	DNA_ligase_aden	0.77
PF00166	Cpn10	0.77
PF07719	TPR_2	0.77
PF08240	ADH_N	0.77
PF07690	MFS_1	0.77
PF10056	DUF2293	0.77
PF09926	DUF2158	0.77
PF00171	Aldedh	0.77
PF03734	YkuD	0.77
PF00561	Abhydrolase_1	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	2.31
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	2.31
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	1.54
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.77
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.77
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	0.77
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.77
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.77
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.77
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.77
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.77
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.77
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.77
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.77
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.77
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.77
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.77
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.77
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.77
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.77
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.77
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.77
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.77
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.85 %
Unclassified	root	N/A	16.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.85 %
Unclassified	root	N/A	16.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.85 %
Unclassified	root	N/A	16.15 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	70.77 %
Unclassified	root	N/A	16.15 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	66.92 %
Unclassified	root	N/A	16.15 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.77 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.77 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	39.23 %
Unclassified	root	N/A	16.15 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.77 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	39.23 %
Unclassified	root	N/A	16.15 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.77 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	39.23 %
Unclassified	root	N/A	16.15 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.31 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.77 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	0.77 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	39.23 %
Unclassified	root	N/A	16.15 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.77 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.77 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.77 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	39.23 %
Unclassified	root	N/A	16.15 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.77 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	0.77 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	0.77 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.77 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_285672_length_971_cov_5.557158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1003	Open in IMG/M
2166559005\|cont_contig104899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300000443\|F12B_10417592	Not Available	1144	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10053747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	895	Open in IMG/M
3300000890\|JGI11643J12802_11882899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300002245\|JGIcombinedJ26739_100094516	All Organisms → cellular organisms → Bacteria	2793	Open in IMG/M
3300003659\|JGI25404J52841_10109086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300005176\|Ga0066679_10664660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	678	Open in IMG/M
3300005440\|Ga0070705_100626443	All Organisms → cellular organisms → Bacteria → Proteobacteria	836	Open in IMG/M
3300005713\|Ga0066905_101795253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	565	Open in IMG/M
3300005713\|Ga0066905_101909880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	549	Open in IMG/M
3300005764\|Ga0066903_100220110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	2876	Open in IMG/M
3300005764\|Ga0066903_103303824	All Organisms → cellular organisms → Bacteria → Proteobacteria	871	Open in IMG/M
3300006031\|Ga0066651_10089225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1532	Open in IMG/M
3300006052\|Ga0075029_101048141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300006163\|Ga0070715_10755583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300006172\|Ga0075018_10776703	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300006871\|Ga0075434_100549533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1174	Open in IMG/M
3300006953\|Ga0074063_13132759	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300006969\|Ga0075419_10966450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	618	Open in IMG/M
3300007076\|Ga0075435_101557862	Not Available	580	Open in IMG/M
3300009088\|Ga0099830_11436640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300009088\|Ga0099830_11510228	Not Available	559	Open in IMG/M
3300009089\|Ga0099828_11260359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300010046\|Ga0126384_12313647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300010359\|Ga0126376_11838726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300010360\|Ga0126372_11580173	Not Available	694	Open in IMG/M
3300010398\|Ga0126383_12161111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	643	Open in IMG/M
3300010398\|Ga0126383_13015710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300012180\|Ga0153974_1012550	Not Available	1800	Open in IMG/M
3300012350\|Ga0137372_10016541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	6979	Open in IMG/M
3300012354\|Ga0137366_10695949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	725	Open in IMG/M
3300012354\|Ga0137366_10767220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300012359\|Ga0137385_11294327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300012948\|Ga0126375_10082826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1842	Open in IMG/M
3300012971\|Ga0126369_10395853	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300012985\|Ga0164308_10864589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	794	Open in IMG/M
3300012988\|Ga0164306_11141540	Not Available	650	Open in IMG/M
3300014321\|Ga0075353_1091560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300016270\|Ga0182036_11305639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300016294\|Ga0182041_10044098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2969	Open in IMG/M
3300016294\|Ga0182041_10416933	Not Available	1146	Open in IMG/M
3300016294\|Ga0182041_12213105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300016319\|Ga0182033_11369985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300016357\|Ga0182032_10656991	Not Available	877	Open in IMG/M
3300016357\|Ga0182032_11552672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300016371\|Ga0182034_11543914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300016404\|Ga0182037_10478570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1040	Open in IMG/M
3300016422\|Ga0182039_10798731	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300016422\|Ga0182039_11342597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300016445\|Ga0182038_11137327	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300017822\|Ga0187802_10112643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1027	Open in IMG/M
3300017972\|Ga0187781_10909896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	641	Open in IMG/M
3300017995\|Ga0187816_10219879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300018007\|Ga0187805_10029581	All Organisms → cellular organisms → Bacteria	2429	Open in IMG/M
3300018090\|Ga0187770_10167768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1679	Open in IMG/M
3300020583\|Ga0210401_10860877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	766	Open in IMG/M
3300021168\|Ga0210406_10358476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1175	Open in IMG/M
3300021170\|Ga0210400_10626611	Not Available	886	Open in IMG/M
3300021178\|Ga0210408_10218851	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300021178\|Ga0210408_10838851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	718	Open in IMG/M
3300021405\|Ga0210387_10994658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300021478\|Ga0210402_10387136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1298	Open in IMG/M
3300021479\|Ga0210410_10460014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1138	Open in IMG/M
3300025906\|Ga0207699_10056640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2337	Open in IMG/M
3300025915\|Ga0207693_10277758	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1312	Open in IMG/M
3300025916\|Ga0207663_10827668	Not Available	738	Open in IMG/M
3300025916\|Ga0207663_11026165	Not Available	662	Open in IMG/M
3300025933\|Ga0207706_10442678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1125	Open in IMG/M
3300025939\|Ga0207665_11018913	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300026304\|Ga0209240_1285627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	510	Open in IMG/M
3300026490\|Ga0257153_1032270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1080	Open in IMG/M
3300026532\|Ga0209160_1275026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300027023\|Ga0207736_107273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	691	Open in IMG/M
3300027041\|Ga0209876_1023794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	512	Open in IMG/M
3300027575\|Ga0209525_1068689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	854	Open in IMG/M
3300027651\|Ga0209217_1030274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1697	Open in IMG/M
3300027654\|Ga0209799_1092450	All Organisms → cellular organisms → Bacteria → Proteobacteria	685	Open in IMG/M
3300027748\|Ga0209689_1347176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	568	Open in IMG/M
3300027894\|Ga0209068_10786826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300028047\|Ga0209526_10206105	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1360	Open in IMG/M
3300028047\|Ga0209526_10575364	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300028536\|Ga0137415_10445500	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300028718\|Ga0307307_10144990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	740	Open in IMG/M
3300028718\|Ga0307307_10217722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300028791\|Ga0307290_10279113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	612	Open in IMG/M
3300031092\|Ga0308204_10355110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300031544\|Ga0318534_10544058	Not Available	662	Open in IMG/M
3300031545\|Ga0318541_10845501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300031546\|Ga0318538_10476572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300031668\|Ga0318542_10279975	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300031681\|Ga0318572_10989006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300031764\|Ga0318535_10454467	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	570	Open in IMG/M
3300031764\|Ga0318535_10528373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300031765\|Ga0318554_10539014	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300031782\|Ga0318552_10130622	Not Available	1255	Open in IMG/M
3300031792\|Ga0318529_10255050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	816	Open in IMG/M
3300031798\|Ga0318523_10186451	Not Available	1035	Open in IMG/M
3300031821\|Ga0318567_10300146	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300031821\|Ga0318567_10550666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300031833\|Ga0310917_10144677	Not Available	1564	Open in IMG/M
3300031845\|Ga0318511_10415285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	617	Open in IMG/M
3300031846\|Ga0318512_10084023	Not Available	1476	Open in IMG/M
3300031890\|Ga0306925_10360791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1560	Open in IMG/M
3300031890\|Ga0306925_10365615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1548	Open in IMG/M
3300031890\|Ga0306925_11572872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300031893\|Ga0318536_10493955	Not Available	615	Open in IMG/M
3300031894\|Ga0318522_10227654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	707	Open in IMG/M
3300031896\|Ga0318551_10694757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300031897\|Ga0318520_10563515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300031910\|Ga0306923_10646671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1182	Open in IMG/M
3300031910\|Ga0306923_10680532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1147	Open in IMG/M
3300031910\|Ga0306923_12535077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300031942\|Ga0310916_10334820	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300031942\|Ga0310916_10856283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300031954\|Ga0306926_10313747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1940	Open in IMG/M
3300031954\|Ga0306926_11210131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	887	Open in IMG/M
3300031954\|Ga0306926_12291039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300031959\|Ga0318530_10237074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	751	Open in IMG/M
3300031959\|Ga0318530_10247826	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300032039\|Ga0318559_10257098	Not Available	808	Open in IMG/M
3300032041\|Ga0318549_10342856	Not Available	673	Open in IMG/M
3300032052\|Ga0318506_10057584	Not Available	1585	Open in IMG/M
3300032067\|Ga0318524_10328604	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300032091\|Ga0318577_10116072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1262	Open in IMG/M
3300032160\|Ga0311301_11333597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	903	Open in IMG/M
3300032261\|Ga0306920_101918910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	832	Open in IMG/M
3300033290\|Ga0318519_10300806	Not Available	939	Open in IMG/M
3300033433\|Ga0326726_12197154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300033887\|Ga0334790_058352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1399	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.62%
Host-Associated	Host-Associated	4.62%
Engineered	Engineered	0.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.00%
Aquatic	Environmental → Aquatic	4.62%
Plants	Host-Associated → Plants	3.85%
Fungi	Host-Associated → Fungi	0.77%
Modeled	Engineered → Modeled	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.08%
Freshwater	Environmental → Aquatic → Freshwater	2.31%
Sediment	Environmental → Aquatic → Sediment	2.31%
Peat	Environmental → Terrestrial → Peat	1.54%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.77%
Mycelium	Host-Associated → Fungi → Mycelium	0.77%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.77%
Loam	Environmental → Terrestrial → Soil → Loam	14.62%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.54%
Sand	Environmental → Terrestrial → Soil → Sand	0.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.77%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.77%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.69%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.38%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.31%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.31%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.31%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.54%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.77%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.77%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.77%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.31%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.77%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.77%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.77%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.77%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.77%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.77%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.77%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.77%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027023	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 1 (SPAdes)	Environmental	Open in IMG/M
3300027041	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033887	Peat soil microbial communities from Stordalen Mire, Sweden - 713 P-1-X1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063108

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_02693680	2140918013	Soil	MEDPMCWEIDYKFFAELEKARETRKQEQRAGVIDSLLNEANKQSGQD
cont_0898.00006270	2166559005	Simulated	MEDLMCWEIDYKLFAEQTKAQETRIKKEQHADVIDRLLNEA
F12B_104175921	3300000443	Soil	WEIDYKFFAELEKARETRTKQEQRAGVIDSLLNEANKQSDK
AF_2010_repII_A001DRAFT_100537471	3300000793	Forest Soil	MCWEIDYKFFAEQKKAKEIEQQRRAGVIDQLLNDAAKQ
JGI11643J12802_118828991	3300000890	Soil	MCWEIDYKFFAEQKKAQDARIKQEKRAGVIDGLLNQANEQGE
JGIcombinedJ26739_1000945161	3300002245	Forest Soil	MCWEIDYKFFAEQKKAHEARIKQQQRAGVLDQLLSEANKQADDTQT
JGI25404J52841_101090863	3300003659	Tabebuia Heterophylla Rhizosphere	MEDPMCWEIDYKFFAELEKARESRTKQEQRAGVIDSLLNEVNKQSEKT
Ga0066679_106646602	3300005176	Soil	MCWEIDYKLFAEQKKAQEIRIDQERRAGVIDQLLNEANKQGE
Ga0070705_1006264431	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MEDSMCWEIDYKFFAEQRKAQEARIKQEQRAGVINQLLNEANQQGGTL*
Ga0066905_1017952531	3300005713	Tropical Forest Soil	MCWEVDYKFLAELEKARETRIKQERRAGVIDNLLNEVNQQSDKTN
Ga0066905_1019098801	3300005713	Tropical Forest Soil	MCWEINYKFLAELEKARETRIKQERRAGVIDNLLNEVNQQSDKTN
Ga0066903_1002201104	3300005764	Tropical Forest Soil	MCWEIDYKLFAELEKARETKIKQEQPAVVIDKLLNEATKQSDKT
Ga0066903_1033038241	3300005764	Tropical Forest Soil	MCWERDYKFFAEQKKAQESRIRGEQRSGVIHQLLNEANKQGEST
Ga0066651_100892252	3300006031	Soil	MCWEIDYKFFAEQQKKAQEARIKQEQRAGVIDRLLTEANEQ
Ga0075029_1010481412	3300006052	Watersheds	MCWEMDYRFFTEQKKAQETRIKEEQRAGVIDKLLSEANKQS
Ga0070715_107555832	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MCWEMDHRFFAEQKKAQETRIKEEQRAGVIDKLLSEAHKQS*
Ga0075018_107767031	3300006172	Watersheds	MCYEIDYEIFAAQRKAQEARIKQEQRAGVIDQLLNEANKQ
Ga0075434_1005495333	3300006871	Populus Rhizosphere	MCWEIDYKFFAEQKAQEARIKQEQRAGVIDQLRNEAHQQGDIPQVEEP
Ga0074063_131327591	3300006953	Soil	MCWEIDYKFFAEQKKAQDARIKQEKRAGVIDGLLNQANEQGEK
Ga0075419_109664502	3300006969	Populus Rhizosphere	MCWEIDYKLFADQTKAQETRIKKEQRADVIHRLLNEA
Ga0075435_1015578621	3300007076	Populus Rhizosphere	MCWEIDYKFFAEQKKAQEARTKQQERAGVIDRLLNEAHQQG
Ga0099830_114366402	3300009088	Vadose Zone Soil	MCYEIDYSIFASQKKAQEARIKQEQRAGVIDQLLSDAN
Ga0099830_115102281	3300009088	Vadose Zone Soil	MCWEIDYKLFAEQKKAQESRIEQERRAGVIDQLLNEANKQGERSNV
Ga0099828_112603591	3300009089	Vadose Zone Soil	MEDSMCYEIDYQIFAAQKKAQEARTKQERRAGVIDQLIKDAKLMT*
Ga0126384_123136472	3300010046	Tropical Forest Soil	MEDLMCWEMDYKLFDELKKAEEARIKQEQRGEVITKLLNEANKQS
Ga0126376_118387262	3300010359	Tropical Forest Soil	MEDIMCWEIDYKFFAEQKKAKEIEQQRRAGVIDQLQKEAQKQDDKSNV
Ga0126372_115801732	3300010360	Tropical Forest Soil	MCWEIDYKFFAEQKKAHEARTKQEQRAGVIDRLLN
Ga0126383_121611111	3300010398	Tropical Forest Soil	MCWERDYKFFAEQKKAQETRIKQERRAGVIDRLLNEANRQ
Ga0126383_130157101	3300010398	Tropical Forest Soil	MEDIMCWEIDYKFFAEQKKAKEIEQQRRAGVIDQLLNDAAKQGDKQGDKQ
Ga0153974_10125503	3300012180	Attine Ant Fungus Gardens	MEDSMCWEIDYKFFAEQRKAQETRIKQEQRAGVINQLLNEANQQGEK
Ga0137372_100165418	3300012350	Vadose Zone Soil	MEDTMCWEIDYKFFAEQKKAKEIEQQRRAGVIDQLLNEAQKQDD
Ga0137366_106959492	3300012354	Vadose Zone Soil	MEDTMCWEIDYKFFAEQKKAKEIEQQRRAGVIAQLLNEAQ
Ga0137366_107672201	3300012354	Vadose Zone Soil	MCWEIDYKFFAEQKKAQERRITQQRRADLVDQLLNDANQQGKE
Ga0137385_112943271	3300012359	Vadose Zone Soil	MCHEIDYIFFAEQQKAREARIKQEQRAGVINKLLNEATRAEQAT
Ga0126375_100828261	3300012948	Tropical Forest Soil	MCWEVDYKFFAEQQKKAQDARIKQEQRAGVIDRLLNEANKQGEKTEV
Ga0126369_103958532	3300012971	Tropical Forest Soil	MCWEIDYKFFAEQKQAQDARIKQEQRAGVIDRLLNQANEPGE
Ga0164308_108645891	3300012985	Soil	MEDPMCWEIDYKFFAELEKARETRTKQEQRAGVIDSLLNEAN
Ga0164306_111415402	3300012988	Soil	MCWEMDYRFFAEQKKAQETRIKEEQRAGVIDKLLSEANK
Ga0075353_10915601	3300014321	Natural And Restored Wetlands	MEDSMCWEVDYKFFAELEKARETRKQEQRAGVIDSL
Ga0182036_113056392	3300016270	Soil	MCWQIDYRFFADQKKAQEARIKREQRAGVIDQLLNEANKQGEKT
Ga0182041_100440988	3300016294	Soil	MCWEMDYKLFDELKKAQEARIKQEQRGEVITKLLNEANKQSEKTDVAE
Ga0182041_104169332	3300016294	Soil	MCCEIDYKLFAELEKARETKVKQEQRAGVIDHLLHEANKQ
Ga0182041_122131051	3300016294	Soil	MCWETDYQFFAEQKKAQEARIKQEQRAGAIDQLLKDANKHGEKTN
Ga0182033_113699852	3300016319	Soil	MCWEMDYKPFDELKKAQEARIKQEQRGEVITKLLNEANK
Ga0182032_106569911	3300016357	Soil	MCWEIDYKFFAEQKKAQQTRIEQERRAGVIHQLLNEANKQGEPSN
Ga0182032_115526722	3300016357	Soil	MCWQIDYRFFADQKKAQEARIKREQRAGVIDQLLNEANKQGEKTN
Ga0182034_115439142	3300016371	Soil	MCWQIDYRFFADQKKAQEARIKREQRAGVIDQLLNEANK
Ga0182037_104785702	3300016404	Soil	MCWEMDYKLFDELKKAQEARIKQEKRGEVIIKLLN
Ga0182039_107987312	3300016422	Soil	MCWEIDYKFFAEQKKAQDTRINQEKRAGVIDRLLNQVKEQGQKTHV
Ga0182039_113425971	3300016422	Soil	MCWEIDYKFFAEQQKAQEARIKQEQRSGVINQLLSDATKQ
Ga0182038_111373272	3300016445	Soil	MCWEIDYKFFAEQKKAQDARIKQEKRAGVIDGLLN
Ga0187802_101126433	3300017822	Freshwater Sediment	MCWEMDYRFFAEQKKAQETRIKEEQRAGVIDKLLSEANRQSESTDAT
Ga0187781_109098963	3300017972	Tropical Peatland	MCWEMDYQFFTEHKKAQETQIKQQQRAGVIDKLLNEANKQAE
Ga0187816_102198791	3300017995	Freshwater Sediment	MCWEMDYKLFAELRKEQEARTKQEQRGEVITKLLNEANKQSEKTH
Ga0187805_100295814	3300018007	Freshwater Sediment	MCWEMDYKLFAEQKKAQETRVKQEHRAGVIDKLLNGANK
Ga0187770_101677684	3300018090	Tropical Peatland	MCWELDYKLFAQQQKAQDARIEQERRRDGVVAKLLDDANKQSEKA
Ga0210401_108608771	3300020583	Soil	MCYEIDYEIFAAQRKAQEARIKQEQRAGVIDQLLNEANKQGDDTKTEG
Ga0210406_103584763	3300021168	Soil	MCWEIDYKFFAEQKKAQEARTKQQERAGVIDRLLNEAHQQGDTP
Ga0210400_106266112	3300021170	Soil	MCWEIDYKFFAEQKKAQEARTKQQERAGVIDRLLN
Ga0210408_102188512	3300021178	Soil	MCWEIDYKSFAEQKKAQDARIKQEQRAGVIDGLLNQANEPG
Ga0210408_108388512	3300021178	Soil	MCWEIDYKFLAEHKKAQETRIKQEQRVGIIDQLLNEAN
Ga0210387_109946581	3300021405	Soil	MCYEIDYEIFAAQRKAQEARIKQEQRAGVIDQLLNEANKQGDDT
Ga0210402_103871363	3300021478	Soil	MCWEIDYKFFAEQKKAQEARTKQEQRTGVIDRLLNEAHQQGDTPRVE
Ga0210410_104600141	3300021479	Soil	MCYEIDYQIFAAQRKAQEARIKQEQRAGVIDQLLNEANKQ
Ga0207699_100566401	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MCWEIDYKFFAEQKKAQEARTKQQERAGVIDRLLNEAHQQGDTPQV
Ga0207693_102777582	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MCWEMDYEFFAEQKKAQEARIKQEQRAGVIDQLLNDANKQDQ
Ga0207663_108276682	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MCWEIDYKFFAEQKKAQEARTKQEQRTGVIDRLLNEAHQQGDTPRVEAP
Ga0207663_110261651	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MCWEMDYKFLAEREKAQEARAKQEQRAGVIDQLLNDANKQ
Ga0207706_104426782	3300025933	Corn Rhizosphere	MCWEMDYRFFTEQKKAQETRIKEEQRAGVIDKLLSEASKQRESA
Ga0207665_110189131	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MCREIDYKFFAEQRKAQETRIKQEQRAGVINQLLNEANQQGGTL
Ga0209240_12856271	3300026304	Grasslands Soil	MCWEIDYKFWTEQKRAQETRIKQEQRAGVIDQLLTEANKPAE
Ga0257153_10322701	3300026490	Soil	MCWEIDYKFFEQQKKAQEARIKQEQRAGVIDRLLTEANEQG
Ga0209160_12750262	3300026532	Soil	MCWEIDYKFFAEQKKAKEIEQQRRAGVIDQLLNEAQKQDDKV
Ga0207736_1072732	3300027023	Tropical Forest Soil	MCWEMDYRFFAEQKKAQEKQEQRNEVISKLLNEANKPGEKTNVEE
Ga0209876_10237941	3300027041	Groundwater Sand	MCWEMDYKFFAEQKKAQEARIKQEQRAGVIENLLREANKQGDK
Ga0209525_10686891	3300027575	Forest Soil	MCWEIDYRFFAEQKKAQEARIKQERRAGVIDQLLDDANKQGDDTKTEG
Ga0209217_10302741	3300027651	Forest Soil	MCYEIDYEIFAAQRKAQEARIKQEQRAGVIDQLLNEA
Ga0209799_10924501	3300027654	Tropical Forest Soil	MCWEIDYKFFAEQKQAQDARIKQEQRAGVIDRLLNQANEPG
Ga0209689_13471761	3300027748	Soil	MCWEIDYKFFAEQQKKAQEARVKQEQRAGIIDRLLTEANEQG
Ga0209068_107868261	3300027894	Watersheds	MCYEIDYQIFAAQKKAQEARIKQEQRAGVIDQLLNEANKQS
Ga0209526_102061052	3300028047	Forest Soil	MCYEIDYQIFAAQRKAQEARIKQEQRAGVIDQLLNEANKQG
Ga0209526_105753643	3300028047	Forest Soil	MCYEIDYEIFAAQRKAQEARIKQEQRAGVIDQLLNEANKQG
Ga0137415_104455002	3300028536	Vadose Zone Soil	MCWEIDYKFFEQQKKAQEARIKQEQRAGVIDQQLQRPVAVLHP
Ga0307307_101449902	3300028718	Soil	MCWEIDYKLFAEQTKAQETRIKKEQRADVIHRLLNDANKQ
Ga0307307_102177221	3300028718	Soil	MCWEIDYKFFAEQKKAQEARTKQEQRTGVIDRLLNEAHQQGDTPQVE
Ga0307290_102791132	3300028791	Soil	MEDFMCWEIDYKFFAEREKARETRTKQEQRAGVIGGLLNEANKQSDKT
Ga0308204_103551101	3300031092	Soil	MCWEIDYKFSAEQKEAQDARIKQEQRAGVIDRLLNRSQ
Ga0318534_105440581	3300031544	Soil	MCWEMDYKLFDELKKAQEARIKQEQRGEVITKLLNEANK
Ga0318541_108455012	3300031545	Soil	MCWEIDYKFFAEQKKAQQTRIEQERRAGVIHQLLNEANKQG
Ga0318538_104765722	3300031546	Soil	MCWEMDYKLFDELKKAQEARIKQEQRGEVITKLLN
Ga0318542_102799752	3300031668	Soil	MCWEIDYKFFAEQKKAQDARIKQEQRAGVIDRLLNQANEQG
Ga0318572_109890062	3300031681	Soil	MCYEIDYLFFAEQQKAQEARKKQEQRAGVINKLLDEAT
Ga0318535_104544671	3300031764	Soil	MCWEIDYKFFAEQKKAQQTRIEQERRAGVIHQLLNEAN
Ga0318535_105283731	3300031764	Soil	MCWELDYKFFAEQKKAQETRIEQERRAGVIHHLLNEANK
Ga0318554_105390141	3300031765	Soil	MCWEIDYKFFAEQKKAQDARIKQEQRAGVIDRLLNQAND
Ga0318552_101306224	3300031782	Soil	MCWEIDYKFFAEQKKAKEIEQQRRAGVIDQLLNDAAK
Ga0318529_102550502	3300031792	Soil	MCWERDYKFFAEQKKAQETQIKQARRAGLIDRLLNEANR
Ga0318523_101864513	3300031798	Soil	MCWEMDYKLFDELKKAQEARIKQEQRGEVITKLLNEANKQS
Ga0318567_103001461	3300031821	Soil	MCWEIDYKFFAEQKKAQDARIKQEQRAGVIDRLLNQANE
Ga0318567_105506661	3300031821	Soil	MCWEIDYKFFAEQKKAQEARIKQEQRAGVIDQLLSDANKQ
Ga0310917_101446771	3300031833	Soil	MCWEIDYKFFAEQQKKAQDARIKQEQRAGVIDRLLNDANQQSEKPDV
Ga0318511_104152852	3300031845	Soil	MCWEIDYKFFAEQKKAQQTRIEQERRAGVIHQLLNEANKQGE
Ga0318512_100840234	3300031846	Soil	MEELMCWEMDYKLFDELKKAQEARIKQEQRGEVITKLLNEANKQ
Ga0306925_103607911	3300031890	Soil	MCWEMDDKLFDELKKAQEARIKQEQRGEVITKLLNEANKQ
Ga0306925_103656151	3300031890	Soil	MCWERDYKFFAEQKKAQETQIKQARRAGRIDRLLNEAN
Ga0306925_115728721	3300031890	Soil	MCWEIDYKFFAEQKKAQQTRIEQERRAGVIHQLLNEANKQ
Ga0318536_104939551	3300031893	Soil	MCWEMDYKLFDELKKAQEARIKQEQRGEVITKLLNEANKQSEK
Ga0318522_102276541	3300031894	Soil	MCWERDYKFFAEQKKAQETRIKQERRAGVIDRLLNEANRQGEN
Ga0318551_106947572	3300031896	Soil	MCWERDYKFFAEQKKAQETRIKQERRAGVIDRLLNEANRQGENTAE
Ga0318520_105635151	3300031897	Soil	MCWEMDYKLFSELRKEQEARTRQEQRGEVITKLLSEANKQSEKTNAE
Ga0306923_106466711	3300031910	Soil	MCWERDYKFFAEQKKAQETQIKQARRAGRIDRLLNEANRQGEK
Ga0306923_106805321	3300031910	Soil	MCWEMDDKLFDELKKAQEARIKQEQRGEVITKLLNE
Ga0306923_125350772	3300031910	Soil	MCWEIDYKFFAEQQKAQEARIKQEQRSGVINQLLSDATKQGEKT
Ga0310916_103348202	3300031942	Soil	MCWEIDYKFFAEQKKAQDARIKQEQRAGVIDRLLNQ
Ga0310916_108562832	3300031942	Soil	FGAVPSRMEDIMCWEMDYEFVAAQKKAQEARIKQEQRAGVIDHLLNDANKHG
Ga0306926_103137471	3300031954	Soil	MCWEMDYKLFSELRKEQEARTRQEQRGEVITKLLSEANKQSE
Ga0306926_112101311	3300031954	Soil	MCYEIDYLFFAEQQKAQEARKKQEQRAGVINKLLDEATNQAEQPKVEAA
Ga0306926_122910391	3300031954	Soil	MCWEIDYQFFAEQKKAQEARIKQEQRAGVIDQLLNDANKH
Ga0318530_102370742	3300031959	Soil	MCWERDYKFFAEQKKAQETRIKQERRAGVIDRLLNEANR
Ga0318530_102478261	3300031959	Soil	MCWEIDYKFFAEQKKAQDARIKQEQRAGVIDRLLNQANDQG
Ga0318559_102570983	3300032039	Soil	MCWEMDYKLFDELKKAQEARIKKEQRGEVITNLLN
Ga0318549_103428561	3300032041	Soil	MCWEMDYKLFDELKKAQEARIKQEQRGEAITKLLNEANKQ
Ga0318506_100575841	3300032052	Soil	MCWEIDYKFFAEQKKAQQTRIEQERRAGVIHQLLNE
Ga0318524_103286041	3300032067	Soil	MCWEIDYKFFAEQKKAQDARIKQEQRAGVIDRLLN
Ga0318577_101160723	3300032091	Soil	MCWERDYKFFAEQKKAQETQIKQARRAGLIDRLLNEANRQGEKTAEET
Ga0311301_113335973	3300032160	Peatlands Soil	MCWEMDYNFFAEQKKAQETRNKQEQRAGVIDDLLRQAN
Ga0306920_1019189102	3300032261	Soil	MCWEMDYKLFDELKKAQEARIKQEQRGEVITKLLSEANKQSEKTDVA
Ga0318519_103008061	3300033290	Soil	MCYEIDYLFFAEQQKAQEARKKQEQRAGVINKLLDEATNQAEQPKVEAAP
Ga0326726_121971542	3300033433	Peat Soil	MCWEMDYKFFAEQKKAQEARIKQEQRAGIIENLLREANKQGDKTNV
Ga0334790_058352_279_413	3300033887	Soil	MEDLMCWEMDYKLFAEQKKAQEIQVKQEQRAGVIDKLLNGAMLN

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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