Metagenome / Metatranscriptome Family F063119

Basic Information
Family ID	F063119
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	50 residues
Representative Sequence	MQKPTPFDKPLEQSTGLKFADMSRVQKAVFVAKVVVCVATFGFVFPNVQSD
Number of Associated Samples	112
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	68.75 %
% of genes near scaffold ends (potentially truncated)	3.08 %
% of genes from short scaffolds (< 2000 bps)	9.23 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Unclassified (89.231 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (13.846 % of family members)
Environment Ontology (ENVO)	Unclassified (26.923 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.077 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.38% β-sheet: 0.00% Coil/Unstructured: 69.62%
Feature Viewer

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Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00072	Response_reg	14.73
PF13545	HTH_Crp_2	6.98
PF00118	Cpn60_TCP1	5.43
PF00487	FA_desaturase	3.88
PF07799	DUF1643	3.10
PF03401	TctC	2.33
PF02518	HATPase_c	2.33
PF02775	TPP_enzyme_C	1.55
PF00011	HSP20	1.55
PF05957	DUF883	1.55
PF00989	PAS	0.78
PF01145	Band_7	0.78
PF01979	Amidohydro_1	0.78
PF00903	Glyoxalase	0.78
PF04386	SspB	0.78
PF04909	Amidohydro_2	0.78
PF13560	HTH_31	0.78
PF14534	DUF4440	0.78
PF13442	Cytochrome_CBB3	0.78
PF01391	Collagen	0.78
PF01844	HNH	0.78
PF00381	PTS-HPr	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	5.43
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	3.88
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	3.88
COG4333	Uncharacterized conserved protein, DUF1643 domain	Function unknown [S]	3.10
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	2.33
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.55
COG4575	Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family	Translation, ribosomal structure and biogenesis [J]	1.55
COG1925	HPr or related phosphotransfer protein	Signal transduction mechanisms [T]	0.78
COG2969	Stringent starvation protein B, binds SsrA peptide	Posttranslational modification, protein turnover, chaperones [O]	0.78

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.23 %
All Organisms	root	All Organisms	10.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.23 %
cellular organisms	root	All Organisms → cellular organisms	10.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.23 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	10.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.23 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.23 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	2.31 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.23 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.31 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.23 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.31 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.23 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.31 %
unclassified Ramlibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter	0.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	89.23 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2.31 %
Ramlibacter sp. GTP1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. GTP1	0.77 %

Scaffold	Taxonomy	Length	IMG/M Link
3300002917\|JGI25616J43925_10002506	All Organisms → cellular organisms → Bacteria	7526	Open in IMG/M
3300004479\|Ga0062595_100334277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1044	Open in IMG/M
3300005187\|Ga0066675_11031474	All Organisms → cellular organisms → Bacteria → Proteobacteria	617	Open in IMG/M
3300005364\|Ga0070673_100307225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1398	Open in IMG/M
3300005526\|Ga0073909_10307661	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300005576\|Ga0066708_10048901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2359	Open in IMG/M
3300006903\|Ga0075426_10434818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	971	Open in IMG/M
3300009089\|Ga0099828_10778838	All Organisms → cellular organisms → Bacteria → Proteobacteria	857	Open in IMG/M
3300009090\|Ga0099827_10612095	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300009147\|Ga0114129_11352945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	880	Open in IMG/M
3300010399\|Ga0134127_10013733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6093	Open in IMG/M
3300011120\|Ga0150983_10042433	Not Available	676	Open in IMG/M
3300012096\|Ga0137389_10764417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. GTP1	830	Open in IMG/M
3300018482\|Ga0066669_12377649	Not Available	507	Open in IMG/M
3300025535\|Ga0207423_1018067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1142	Open in IMG/M
3300026320\|Ga0209131_1007825	All Organisms → cellular organisms → Bacteria	6732	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.77%
Host-Associated	Host-Associated	19.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.77%
Plants	Host-Associated → Plants	19.23%
Aquatic	Environmental → Aquatic	10.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.31%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.92%
Freshwater	Environmental → Aquatic → Freshwater	5.38%
Marine	Environmental → Aquatic → Marine	3.85%
Sediment	Environmental → Aquatic → Sediment	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.23%
Loam	Environmental → Terrestrial → Soil → Loam	10.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.46%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.62%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.54%
Lake	Environmental → Aquatic → Freshwater → Lake	0.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.77%
Sand	Environmental → Terrestrial → Soil → Sand	0.77%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.38%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.62%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.08%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.54%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.77%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.85%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.31%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.54%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.54%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.77%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.77%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.77%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.77%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.77%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004009	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300015164	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300024182	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025535	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_100635185	3300001686	Soil	VPTPSPFDKQLSQSTGLKFADMTQGQKCIFVAKLIVCIATFGFVFPNVQND*
C688J18823_101510461	3300001686	Soil	SPFDKQLSQSTGLKFADMTQGQKCIFVAKLIVCIATFGFVFPNVQND*
C688J18823_110489831	3300001686	Soil	SPYDKPLSHATGLKFGDMTQVQKWIFVAKLIVCIATFGFVFPNVQND*
C688J35102_1184194652	3300002568	Soil	VPTPSPYDKPLSHATGLKFGDMTQVQKWIFVAKLIVCIATFGFVFPNVQND*
JGI25614J43888_100093632	3300002906	Grasslands Soil	MQTKFDKPIEVSHGKLFADMTRTQKVVFVAKVVVCVATFGFAFPNVQND*
JGI25613J43889_101343922	3300002907	Grasslands Soil	MQAKFDKPIEVSHGKLFADMTRTQKVVFVAKVVVCVATFGFAFPNVQND*
JGI25616J43925_100025068	3300002917	Grasslands Soil	MQAKFDKPIEVSRGKKFADMTRTQKAVFVAKVVVCVATFGFAFPNVQND*
Ga0055437_102395892	3300004009	Natural And Restored Wetlands	MPKPTPFDKQIAHDFGTRFADMTRAQKWIFVTKVVICVATFGFAFPNVQSE*
Ga0055439_100525271	3300004019	Natural And Restored Wetlands	MPKPTPFDKQIAHDFGTRFADMTRAQKWIFVTKVVICVATFGFAF
Ga0055432_100345732	3300004022	Natural And Restored Wetlands	VPTLTPFHKPLEHSTGRKFADMSGRQKSVFVAKVLMCIATFGFVFPNVQND*
Ga0063356_1002275163	3300004463	Arabidopsis Thaliana Rhizosphere	MSRNTPFDKPPEVSGGMKFADMTPGQKLVFVAKLLVCIATFGYVFPNVQSE*
Ga0063356_1041833991	3300004463	Arabidopsis Thaliana Rhizosphere	VPNNSPFDKPLEHSTGLKFAQMTRMQKYVFVAKLMACIATFG
Ga0063356_1046252292	3300004463	Arabidopsis Thaliana Rhizosphere	MGQPTAFRAPLEQTSSGLKFAEMTRTQKAVFVAKLLTCIATFGFAFPNVQHD*
Ga0062595_1003342771	3300004479	Soil	FDKPLEQSTGRKYAQMTRRQKWIFLAKLVVCIGTFGFAFPNVQHD*
Ga0062591_1016267993	3300004643	Soil	PIEQSTGRKFAQMTRTQKWTFVVKVAVCVATFGFVFPNVQHD*
Ga0062594_1001113792	3300005093	Soil	VKKPSPFDKPLEQSTGRKYAQMTRRQKWIFLAKLVVCIGTFGFAFPNVQHD*
Ga0062594_1018922591	3300005093	Soil	VPNNSPFDKPLEHSTGLKFAQMTRMQKYVFVAKLMACIATFGFAFPNVQNS*
Ga0066674_102296782	3300005166	Soil	MQTKFVKTTEVSRGKKFADMTRRQKIVFVAKVVACVATFGFAFPNVQND*
Ga0066679_108692661	3300005176	Soil	MKESPMEPTPFNKPLESSMGMKFADMTRTQKWTFVAKLLVCIATFGFVFPNVQKE*
Ga0066690_100903322	3300005177	Soil	MSACEADTAHGRKFADMTRVQKIVFVAKVVACVATFGFAFRNVQND*
Ga0066688_101095082	3300005178	Soil	VRDVRLRSKADTAHGRKFADMTRVQKIVFVAKVVACVATFGFAFRNVQND*
Ga0066688_102158543	3300005178	Soil	MEKPSPFQKPLEQDRGMKFAAMTQTQKCVFVAKVVVCVATFGFAFPNVQND*
Ga0066675_102367092	3300005187	Soil	MQTKFDKPIEVSHGQKSANMTRAQKIVFVAKVVACVATFGFAFPNVQND*
Ga0066675_110314742	3300005187	Soil	MAQPAPFKTPLEQDRGMKFADMTGRQKWIFVAKVLVCVATAGFVFPNVQND*
Ga0068869_1015230042	3300005334	Miscanthus Rhizosphere	LTVKKPSPFDKPLEQSTGRKYAQMTRRQKWIFLAKLVVCIGTFGFAFPNVQHD*
Ga0070671_1010429822	3300005355	Switchgrass Rhizosphere	VKKPSPFDKPLEQSTGRKYAQMTRRQKWIFLAKLVICIGTFGFAFPNVQHD*
Ga0070673_1003072255	3300005364	Switchgrass Rhizosphere	PSPFDKPIEQSTGRKFAQMTRTQKWTFVVKVAVCVATFGFVFPNVQHD*
Ga0070714_1004090963	3300005435	Agricultural Soil	MKEPTPFVKPLEQSLGMKFADMSASQKSIWVAKLIVCIGTFGFVFPNVQND*
Ga0070705_1000828821	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPSSPPYQKLVMETKFDKPIEVSRGLKFADMTRLQKAVFVTKVVVCVATFGFVFPNVQND
Ga0070694_1000316472	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	METKFDKPIEVSRGLKFADMTRLQKAVFVTKVVVCVATFGFVFPNVQND*
Ga0066681_103327912	3300005451	Soil	MKESPMEPTPFNKPLESSMGMKFADMTRTQKWTFVAKLLICIATFGFAFPNVQKE*
Ga0070707_1016810162	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKEPTPFVKPLEQSSGRKFADMTASQKSIWLAKLIVCIGTFGFVFPNAQND*
Ga0073909_103076612	3300005526	Surface Soil	MSDPTPFQKPLEHSMGTKFSDMSGAQKAVFVLKLIACIGTFGFAFPNIQSD*
Ga0070696_1000120039	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VPTNSPFDKPLEHSTGLKFAQMTRMQKYVFVAKLMACIATFGFAFPNVQSS*
Ga0066670_103477322	3300005560	Soil	MKDRPMEPTPFNKPLESSMGMKFADMTRLQKWTFVAKLLICIATFGFAFPNVQKE*
Ga0066705_100790914	3300005569	Soil	MQTKFDKQIEVTHGKKFADMTRLQKVTFVAKVVACVATFGFAFPNVQND*
Ga0066702_109013043	3300005575	Soil	MKDRPMEPTPFNKPLESSMGMKFADMTRTQKWTFVAKLLICIATFGFAFPNVQKE*
Ga0066708_100489015	3300005576	Soil	PFNKPLESSMGMKFADMTRLQKWTFVAKLLICIATFGFAFPNVQKE*
Ga0066708_100612192	3300005576	Soil	MQTKFDKPIEVSHGKKSADMTRAQKIVFVAKVVSCVATFGFAFPNVQND*
Ga0066708_106121122	3300005576	Soil	MEKPTAFHKPLEQMSGAKFADMTRTQKCVFVTKLVISIATFGFAFPNVQHD*
Ga0068857_1012875372	3300005577	Corn Rhizosphere	VKKPSPFDKPLEQSTGRKYAQMTRRQKWIFLAKLVVCIGTFGFAFPNVQH
Ga0066651_103304923	3300006031	Soil	METKFDKPIDVARGKTFADMTQAQKVIFVAKVVVCVATFGFAFPNVQND*
Ga0070715_102927401	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VKKPSPFDKPLEQSTGRKYAQMTRQQKWIFVAKLVVCIATFGFVFPNVQHD*
Ga0070716_1008636013	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKEPTPFVKPLEQSSGRKFADMTASQKSIWLAKLIVCMGTFGFVFPNVQND*
Ga0079222_122942671	3300006755	Agricultural Soil	MKEPTRFVKPLEQSAGRKFADMTASEKVIWVAKLIVCIGTFGFVCPNVQND*
Ga0066658_102986282	3300006794	Soil	MNDRPMEPTPFNKPLESSMGMKFADMTRLQKWTFVAKLLICIATFGFAFPNVQKE*
Ga0079221_111833692	3300006804	Agricultural Soil	MKEPTPFVKPLEQSSGRKFADMTASQKCIWVAKLIVCIATFGFAFPNVQSD*
Ga0075430_1005362112	3300006846	Populus Rhizosphere	VPTPTPFQKPLEYSTGLKFADMSRQQKSVFVAKLLVCIATFGFVFPNVQND*
Ga0075433_105082623	3300006852	Populus Rhizosphere	MDKRTPTPFEKQIEYPSGRKFADMTRQQKLIFVVKVVACVCTFGFAFPNVQND*
Ga0075434_1010269953	3300006871	Populus Rhizosphere	MKEPSPFDKPLERSTGRKYADMTPMQKAVFVAKVLACVATFGFAFPNVQSD*
Ga0075434_1012014862	3300006871	Populus Rhizosphere	MQESTPFKKAPEYSTGMKFAEMSRKQKYVFVAKLMICIATFGFVFPNVQSS*
Ga0079217_102520322	3300006876	Agricultural Soil	MDAPTPFKAPLEQQATGLKFAEMTGTQKAVFVAKLVACIATFGFAFPNVQHD*
Ga0079215_106498111	3300006894	Agricultural Soil	LQTPSPFGKPLEYPAGVKFADMTGTQKCVFAAELVACIATFGFAFPNVQHD*
Ga0075426_100178974	3300006903	Populus Rhizosphere	MKEPTPFVKPLEQSSGRKFADMTGSEKVIWVAKLIVCIGTFGFVFPNVQND*
Ga0075426_104348184	3300006903	Populus Rhizosphere	MSQQPTPFQKVLEEDHGMRFADMTRTQKWIFVAKVVVCVSTFGFAFPNVQND*
Ga0075424_1007798323	3300006904	Populus Rhizosphere	MKEPSPFDKPLERSTGRKYADMTPMQKAVFVAKVVACVATFGFAFPNVQSD*
Ga0075424_1018211363	3300006904	Populus Rhizosphere	FDKPLAQSTGRKFAEMTRGQKFIFVMKLVVCIATFGFVFPNVQHD*
Ga0075436_1005299012	3300006914	Populus Rhizosphere	MKEPTPFVKPLEQSSGRKFADMTAGQKCIWVAKLIVCIATFGFAFPNVQSD*
Ga0079218_138653221	3300007004	Agricultural Soil	MPIPSHFDEPLKHSTGLKFADMTRTQKCVFGVKLVVCIATFGFAFPNVQND*
Ga0099791_105601472	3300007255	Vadose Zone Soil	MQAKFDKVVEVSRGRKFADMTRLQKVVFVAKVVVCVATFGFAFPNVQND*
Ga0099791_106561911	3300007255	Vadose Zone Soil	MQTKFDKQIEVSHGQKFADMTRLQKVVFVAKVVVCVATFGFAFP
Ga0099794_104028682	3300007265	Vadose Zone Soil	MQKSSPFEKAPKYSTGLKFAQMTRSQKFVFVAKLVACIATFGIAFPNVQSD*
Ga0066710_1033621712	3300009012	Grasslands Soil	METKFVKTNEVSRGKKFTDMTRGQKIVFVAKVVACVATFGFAFPNVQND
Ga0105095_104532392	3300009053	Freshwater Sediment	MDAPTPFKAPLEQQATGLKFAEMNRTQKAVFVAKLMACIAPFGFAFPNVQHD*
Ga0105106_100516456	3300009078	Freshwater Sediment	MDAPTPFKAPLEQQATGLKFAQMNRTQKAVFVAKLMACIAPFGFAFPNVQHD*
Ga0099828_107788382	3300009089	Vadose Zone Soil	MSTEKPTPFHKPLEQSTGTKFADMTRTQKWIFVAKVVVCVATGGFVFPNVQND*
Ga0099827_106120953	3300009090	Vadose Zone Soil	METPSPFQKPIEQKRGMKFADMTRTQKCVFVAKVVVCVATFGFALPNVQND*
Ga0066709_1000774273	3300009137	Grasslands Soil	MMEKPSPFQKPLEQDRGMKFAAMTQTQKCVFVAKVVVCVATFGFAFPNVQND*
Ga0114129_113529452	3300009147	Populus Rhizosphere	MEKKSSPFDKPLALDLGTKFADMTRAQKWIFVAKLIACIGTFGFAFPNVQSS*
Ga0105094_1000096411	3300009153	Freshwater Sediment	MDAPTPFKAPLEQQATGLKFAEMNRTQKAVFVAKLMACIAPFGFAFPNVLHD*
Ga0105237_105166941	3300009545	Corn Rhizosphere	VKKPSPFDKPLEQSTGRKYAQMTRRQKWIFLAKLVVCIGTFGFA
Ga0134111_103676682	3300010329	Grasslands Soil	MMEKHSPFQKPLEQDRGMKFAAMTQTQKCVFVAKVVVCVATFGFAFPNVQND*
Ga0134127_100137339	3300010399	Terrestrial Soil	VPNNSPFDKPLEHSTGLKFAQMTRMQKYVFVAKLVACIATFGFAFPNVQNS*
Ga0150983_100424331	3300011120	Forest Soil	RQAGPEGVTLMDKPTPTPFQKVHEQDRGRKFGDMTRAQKWIFVAKVVVCVATFGFAFPNVQND*
Ga0137391_110148752	3300011270	Vadose Zone Soil	METPSPFQKPIEQKRGMKFADMTQTQKCVFVAKVVVCVATFGFAFPNVQND*
Ga0137389_107644171	3300012096	Vadose Zone Soil	MSTEKPTPFHKPLEQSTGTKFADMTRKQKCIFVAKVVVCVATGGFMFPNVQSD*
Ga0137399_103355951	3300012203	Vadose Zone Soil	MQTKFDKPIEVSHGKKFADMTRAQNIVFVAKVVASVATFGFAFPNVQND
Ga0137399_108808113	3300012203	Vadose Zone Soil	MQTKFDKPIHVTHGQKFADMTRLQKVVFVAKVVACVATFGFAFPNVQND*
Ga0137371_113018302	3300012356	Vadose Zone Soil	METPSPFQKPIEQNRGMKFAYMTQTQKCVSVAKVVVCVATFGFAFPNVQND*
Ga0150984_1132153112	3300012469	Avena Fatua Rhizosphere	MSEPTPFIKPLESVTGRKFADMTPVQKVVFVCKIIICVATFGFAFPNAQSD*
Ga0150984_1170180792	3300012469	Avena Fatua Rhizosphere	VQTPSPFDKPLSQSIGLSFADMTQRQKCFFLVKLIVCIATFGFVFPNVQND*
Ga0137397_102329371	3300012685	Vadose Zone Soil	MQTKFDKQIEVSHGQKFADMTRMQKVIFVAKVVVCVATFGFAFPNVQND*
Ga0137394_101012212	3300012922	Vadose Zone Soil	MQTKFDKVTEVSRGKKFADMTRAQKVVFVAKVVVCVATFGFAFPNVQND*
Ga0137419_105430292	3300012925	Vadose Zone Soil	MQTKFDKPIEVSHGKKFADMTRAQNIVFVAKVVASVATFGFAFPNVQND*
Ga0137416_101199552	3300012927	Vadose Zone Soil	MQTKFDHPMQASHGKKFAELTRAENIVFVAKVVASVATFGFAFPNVQND*
Ga0137410_102328642	3300012944	Vadose Zone Soil	MQTQCEKQIEVSHGQKFADMTRMQKVIFVAKVVVCVATFGFAFPNVQND*
Ga0137410_107739932	3300012944	Vadose Zone Soil	MQAKFDKPVEVSHGKLFADMTRTQKVVFVAKVVVCVATFGFAFPNVQND*
Ga0164307_101158175	3300012987	Soil	FDKPIEQSTGRKFAQMTRTQKWSFVVKVAVCVATFGFVFPNVQHD*
Ga0167652_10322823	3300015164	Glacier Forefield Soil	MQTKFDKQIEVTHGKKFADMTRVEKIVFVVKVVVCVITFGFAFPNVQND*
Ga0132258_1021874911	3300015371	Arabidopsis Rhizosphere	METKFDKPIEVSRGLKFADMTRLQKAVFVTKVVLCVATFGFVFPNVQND*
Ga0132257_1036933041	3300015373	Arabidopsis Rhizosphere	METKFDKPIEVSRGLKFADMTRLQKAVFVTKVVLCVATFG
Ga0066667_102624072	3300018433	Grasslands Soil	MQTKFDKPIEVSHGKKSADMTRAQKIVFVAKVVSCVATFGFAFPNVQND
Ga0066669_123776492	3300018482	Grasslands Soil	MERSTPYQKPFEQKRGMKFAEMTRRQKWVFAAKVVVCVATFGFAFPNVQND
Ga0180115_12834402	3300019257	Groundwater Sediment	VPAPTPFHKPLEYSTGLKFADMTRRQKSVFVAKVLVCIATFGFVFPNVQSE
Ga0196964_104118712	3300020202	Soil	VPTPTPFMEPLKYSGGLKFADMTFRQKCIFAAKLVVCIGTFGFAFPNVQND
Ga0247669_10016298	3300024182	Soil	MAEPTPFLKPLEQSMGTKFSDMSGWQKAAFVGKVIVCIATFGFAFPNVQSD
Ga0247688_10122591	3300024186	Soil	PFLKPLEQSMGTKFSDMSGWQKAAFVGKVIVCIATFGFAFPNVQSD
Ga0247665_10268122	3300024219	Soil	MAEPTPFLKPLERSMGTKFSDMTGWQKTAFVCKVIVCIATFGFAFPNVQSD
Ga0247680_10124093	3300024246	Soil	VKKPSPFDKPLEQSTGRKYAQMTRRQKWIFLAKLVVCIGTF
Ga0247666_10801983	3300024323	Soil	TPFLKPLEQSMGTKFSDMSGWQKAAFVGKVIVCIATFGFAFPNVQSD
Ga0207423_10180673	3300025535	Natural And Restored Wetlands	VPTLTPFHKPLEHSTGRKFADMSGRQKSVFVAKVLMCIATFGFVFPNVQND
Ga0210108_11084981	3300025560	Natural And Restored Wetlands	MPKPTPFDKQIAHDFGTRFADMTRAQKWIFVTKVVICVATFGFAFPNVQSE
Ga0207646_107372411	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKEPTPFVKPLEQSSGRKFADMTASQKCIWVAKLIVCIATFGFAFPNVQSD
Ga0207665_100660294	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKEPTPFVKPLEQSSGRKFADMTASQKSIWLAKLIVCMGTFGFVFPNVQND
Ga0207651_111660391	3300025960	Switchgrass Rhizosphere	VKTPSPFDKPIEQSTGRKFAQMTRTQKWTFVVKVAVCVATFGFVFPNVQHD
Ga0207677_122541222	3300026023	Miscanthus Rhizosphere	VKKPSPFDKPLEQSTGRKYAQMTRRQKWIFLAKLVVCI
Ga0207703_103617624	3300026035	Switchgrass Rhizosphere	VKKPSPFDKPLEQSTGRKYAQMTRRQKWIFLAKLVVCIGTFGFAFP
Ga0209234_10291882	3300026295	Grasslands Soil	MEKPTAFHKPLEQKSGAKFADMTRTQKCVFVTKLVVSIATFGFAFPNVQHD
Ga0209234_12288111	3300026295	Grasslands Soil	SLYKEFTMQTKFVKTTEVSRGKKFTDMTRGQKIVFVAKVVACVATFGFAFPNVQND
Ga0209234_12288112	3300026295	Grasslands Soil	MQTKFDKPIEVSHGKKSADMTRAQKIVFVAKVVSSVATFAFPNVQND
Ga0209240_11031272	3300026304	Grasslands Soil	MQTKFDKPIEVSHGKLFADMTRTQKVVFVAKVVVCVATFGFAFPNVQND
Ga0209131_100782511	3300026320	Grasslands Soil	MQAKFDKPIEVSHGKLFADMTRTQKVVFVAKVVVCVATFGFAFPNVQND
Ga0209807_11652222	3300026530	Soil	MQTKFDKQIEVTHGKKFADMTRLQKVTFVAKVVACVATFGFAFPNVQND
Ga0209056_101906191	3300026538	Soil	MEKPSPFQKPLEQDRGMKFAAMTQTQKCVFVAKVVVCVATFGFAFPNVQND
Ga0208185_10734531	3300027533	Soil	VPAPTPFHKPLEYSTGLKFSDMSRRQKSVFVAKVLVCIATFGFVFPNVQSE
Ga0209286_10156713	3300027713	Freshwater Sediment	MDAPTPFKAPLEQQATGLKFAEMNRTQKAVFVAKLMACIAPFGFAFPNVLHD
Ga0209703_10556821	3300027723	Freshwater Sediment	MDAPTPFKAPLEQQATGLKFAEMNRTQKAVFVAKLMACIAPFGFAFPNVQHD
Ga0209486_102458164	3300027886	Agricultural Soil	LQTPSPFDKPLEHSTSLKFVDMTRTQKCVFVAKLVACIATFGFAFPNVQND
Ga0137415_104375482	3300028536	Vadose Zone Soil	MQTKFDHPMQASHGKKFAELTRAENIVFVAKVVASVATFGFAFPNVQND
Ga0307503_104854291	3300028802	Soil	MEESTPFIKPPEHSMGKKFSDMTRWQKAAFVGKVIVCVATFGYAFPNVQSD
Ga0307497_104628292	3300031226	Soil	METKFDKPVEVSHGKKFADMTRPQKVVFVAKVMVCVATFGFAFPNVQND
Ga0307469_116710752	3300031720	Hardwood Forest Soil	METKFDKPPEVPHGKKFAGMTRAQKVGFVTKVVVCVATFGFAFPNVQND
Ga0307468_1003790302	3300031740	Hardwood Forest Soil	VPTTPTPFQKPLEYSTGRKFADMSGRQKSVFVAKLLVCIATFGYVFPNVQND
Ga0307473_106733782	3300031820	Hardwood Forest Soil	VPAPTPEFTPFLKPLEQSTGHKFADMSGRQKSVFVAMVLLCIATFGFVFPNVQND
Ga0310885_103993861	3300031943	Soil	VNTPSPFDKPLEQSTGRKFAQMTPTQKWIFVVKLAVCIATFGFVFPNVQHD
Ga0310899_106704412	3300032017	Soil	TLTTFHKPLEHSTGRKFADMSGRQKSVFVAKVLMCIATFGFVFPNVQND
Ga0315281_102396023	3300032163	Sediment	MEEPSGFQKAPTYSTGMKFADMTRTQKIVFVAKVVVCVCTFGFVFPNVQSD
Ga0307470_109969612	3300032174	Hardwood Forest Soil	MEEPSRFDKAPEYSRGMKFEEMTGMQKVIFVAKVVVCVATFGFVFPNVQ
Ga0307471_1015703503	3300032180	Hardwood Forest Soil	MQKPTPFDKPLEQSTGLKFADMSRVQKAVFVAKVVVCVATFGFVFPNVQSD
Ga0247829_102522342	3300033550	Soil	MDAPTPFKAPLEQQATGLKFAQMNRTQKAVFVAKLVACIATFGFAFPNVQHD

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063119

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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