Metagenome / Metatranscriptome Family F063137

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063137
Family Type	Metagenome / Metatranscriptome
Number of Sequences	130
Average Sequence Length	74 residues
Representative Sequence	MIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAEGCFMNHGVRLDTVAYRAD
Number of Associated Samples	92
Number of Associated Scaffolds	130

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.62 %
% of genes near scaffold ends (potentially truncated)	30.00 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.308 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (25.385 % of family members)
Environment Ontology (ENVO)	Unclassified (42.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.923 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.36% β-sheet: 0.00% Coil/Unstructured: 63.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 130 Family Scaffolds
PF04392	ABC_sub_bind	23.08
PF03795	YCII	3.08
PF03734	YkuD	2.31
PF10282	Lactonase	1.54
PF03401	TctC	0.77
PF01548	DEDD_Tnp_IS110	0.77
PF03171	2OG-FeII_Oxy	0.77
PF13340	DUF4096	0.77
PF04226	Transgly_assoc	0.77
PF00043	GST_C	0.77
PF13437	HlyD_3	0.77
PF02518	HATPase_c	0.77
PF14534	DUF4440	0.77
PF13185	GAF_2	0.77
PF00355	Rieske	0.77
PF00753	Lactamase_B	0.77

COG ID	Name	Functional Category	% Frequency in 130 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	23.08
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.08
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	2.31
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	2.31
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.77
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.77
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.77
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.77
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.77

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.31 %
Unclassified	root	N/A	17.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.31 %
Unclassified	root	N/A	17.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.31 %
Unclassified	root	N/A	17.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	70.00 %
Unclassified	root	N/A	17.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	62.31 %
Unclassified	root	N/A	17.69 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	35.38 %
Unclassified	root	N/A	17.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	34.62 %
Unclassified	root	N/A	17.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.92 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	34.62 %
Unclassified	root	N/A	17.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.38 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	34.62 %
Unclassified	root	N/A	17.69 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.77 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.77 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.77 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.77 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	34.62 %
Unclassified	root	N/A	17.69 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.77 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.77 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.77 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.77 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2035918004\|FACENC_F56XM5W01EDQG4	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
2088090014\|GPIPI_17034980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2059	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1056056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1076549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10160389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	538	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10051841	All Organisms → cellular organisms → Bacteria → Proteobacteria	915	Open in IMG/M
3300000955\|JGI1027J12803_101663406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	750	Open in IMG/M
3300005093\|Ga0062594_102138810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	603	Open in IMG/M
3300005163\|Ga0066823_10050171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	752	Open in IMG/M
3300005332\|Ga0066388_101738543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1106	Open in IMG/M
3300005332\|Ga0066388_102553857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	929	Open in IMG/M
3300005332\|Ga0066388_102722757	Not Available	902	Open in IMG/M
3300005332\|Ga0066388_102749303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	898	Open in IMG/M
3300005332\|Ga0066388_104379129	Not Available	719	Open in IMG/M
3300005332\|Ga0066388_104571022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	704	Open in IMG/M
3300005332\|Ga0066388_105403378	Not Available	648	Open in IMG/M
3300005332\|Ga0066388_106097078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M
3300005332\|Ga0066388_106674340	Not Available	581	Open in IMG/M
3300005363\|Ga0008090_10112070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	965	Open in IMG/M
3300005363\|Ga0008090_10241972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1842	Open in IMG/M
3300005434\|Ga0070709_10130751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1714	Open in IMG/M
3300005435\|Ga0070714_100129839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2251	Open in IMG/M
3300005444\|Ga0070694_100825878	Not Available	761	Open in IMG/M
3300005445\|Ga0070708_100141069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2235	Open in IMG/M
3300005467\|Ga0070706_100028243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5164	Open in IMG/M
3300005467\|Ga0070706_100725258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	921	Open in IMG/M
3300005471\|Ga0070698_100270320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1631	Open in IMG/M
3300005536\|Ga0070697_100356784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1263	Open in IMG/M
3300005718\|Ga0068866_10415390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	871	Open in IMG/M
3300005764\|Ga0066903_101065205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1486	Open in IMG/M
3300005764\|Ga0066903_101553632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1252	Open in IMG/M
3300005764\|Ga0066903_102187115	Not Available	1066	Open in IMG/M
3300005764\|Ga0066903_107533281	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005764\|Ga0066903_109061766	Not Available	503	Open in IMG/M
3300006028\|Ga0070717_10272490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1499	Open in IMG/M
3300006163\|Ga0070715_10012461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3096	Open in IMG/M
3300006175\|Ga0070712_101312342	Not Available	631	Open in IMG/M
3300006845\|Ga0075421_101803615	Not Available	658	Open in IMG/M
3300006854\|Ga0075425_100342787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1720	Open in IMG/M
3300006904\|Ga0075424_100725929	Not Available	1061	Open in IMG/M
3300009147\|Ga0114129_11082386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1005	Open in IMG/M
3300009162\|Ga0075423_12525261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300009553\|Ga0105249_11015266	Not Available	898	Open in IMG/M
3300009792\|Ga0126374_11052721	Not Available	642	Open in IMG/M
3300010043\|Ga0126380_10718126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	806	Open in IMG/M
3300010046\|Ga0126384_10435788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1115	Open in IMG/M
3300010046\|Ga0126384_11157744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	711	Open in IMG/M
3300010046\|Ga0126384_11676304	All Organisms → cellular organisms → Bacteria → Proteobacteria	600	Open in IMG/M
3300010047\|Ga0126382_10087067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1974	Open in IMG/M
3300010048\|Ga0126373_10278726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1658	Open in IMG/M
3300010048\|Ga0126373_10332459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1526	Open in IMG/M
3300010048\|Ga0126373_11163619	All Organisms → cellular organisms → Bacteria → Proteobacteria	837	Open in IMG/M
3300010358\|Ga0126370_10289165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1293	Open in IMG/M
3300010358\|Ga0126370_11211286	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300010359\|Ga0126376_10532249	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300010359\|Ga0126376_12700151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300010360\|Ga0126372_11259665	All Organisms → cellular organisms → Bacteria → Proteobacteria	766	Open in IMG/M
3300010360\|Ga0126372_12604465	Not Available	557	Open in IMG/M
3300010361\|Ga0126378_11275159	Not Available	830	Open in IMG/M
3300010361\|Ga0126378_12436569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300010362\|Ga0126377_10774851	All Organisms → cellular organisms → Bacteria → Proteobacteria	1016	Open in IMG/M
3300010366\|Ga0126379_10369127	All Organisms → cellular organisms → Bacteria → Proteobacteria	1472	Open in IMG/M
3300010366\|Ga0126379_12454670	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300010366\|Ga0126379_13865854	Not Available	502	Open in IMG/M
3300010371\|Ga0134125_11808437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300010376\|Ga0126381_101244295	Not Available	1076	Open in IMG/M
3300010398\|Ga0126383_10614294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1159	Open in IMG/M
3300010398\|Ga0126383_12012327	Not Available	665	Open in IMG/M
3300010398\|Ga0126383_12531057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	597	Open in IMG/M
3300010868\|Ga0124844_1239476	Not Available	643	Open in IMG/M
3300011269\|Ga0137392_10775638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	792	Open in IMG/M
3300011271\|Ga0137393_10524583	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300012361\|Ga0137360_11662572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300012363\|Ga0137390_10560565	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300012923\|Ga0137359_10637819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	932	Open in IMG/M
3300012948\|Ga0126375_10613441	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300012948\|Ga0126375_11233094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300012955\|Ga0164298_10479699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300012958\|Ga0164299_10009097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3598	Open in IMG/M
3300012960\|Ga0164301_10128819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1510	Open in IMG/M
3300012971\|Ga0126369_11956015	Not Available	674	Open in IMG/M
3300012971\|Ga0126369_13499270	Not Available	514	Open in IMG/M
3300012971\|Ga0126369_13595909	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300012984\|Ga0164309_10312128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1138	Open in IMG/M
3300013307\|Ga0157372_13273186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300016319\|Ga0182033_11306534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300016341\|Ga0182035_10562747	All Organisms → cellular organisms → Bacteria → Proteobacteria	981	Open in IMG/M
3300016341\|Ga0182035_11614727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300016371\|Ga0182034_11117530	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300016371\|Ga0182034_11284630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300016404\|Ga0182037_11611534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300016422\|Ga0182039_10358322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1227	Open in IMG/M
3300021178\|Ga0210408_10064947	All Organisms → cellular organisms → Bacteria	2851	Open in IMG/M
3300021560\|Ga0126371_10426134	All Organisms → cellular organisms → Bacteria	1471	Open in IMG/M
3300021560\|Ga0126371_10690929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1169	Open in IMG/M
3300021560\|Ga0126371_13340722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300025905\|Ga0207685_10022815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2121	Open in IMG/M
3300025910\|Ga0207684_10242589	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300025910\|Ga0207684_10833461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	778	Open in IMG/M
3300025922\|Ga0207646_10247722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1609	Open in IMG/M
3300025929\|Ga0207664_11684821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300031543\|Ga0318516_10226207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1081	Open in IMG/M
3300031543\|Ga0318516_10850445	Not Available	514	Open in IMG/M
3300031545\|Ga0318541_10060917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1960	Open in IMG/M
3300031545\|Ga0318541_10117645	Not Available	1440	Open in IMG/M
3300031545\|Ga0318541_10233461	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300031549\|Ga0318571_10464922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300031561\|Ga0318528_10114610	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300031573\|Ga0310915_10891540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300031668\|Ga0318542_10600559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300031680\|Ga0318574_10665773	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300031720\|Ga0307469_10285936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1350	Open in IMG/M
3300031747\|Ga0318502_10697830	Not Available	613	Open in IMG/M
3300031765\|Ga0318554_10263141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	982	Open in IMG/M
3300031780\|Ga0318508_1152472	All Organisms → cellular organisms → Bacteria → Proteobacteria	656	Open in IMG/M
3300031792\|Ga0318529_10551382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300031795\|Ga0318557_10265818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	786	Open in IMG/M
3300031798\|Ga0318523_10490926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	608	Open in IMG/M
3300031819\|Ga0318568_10381617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	878	Open in IMG/M
3300031833\|Ga0310917_10129717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1648	Open in IMG/M
3300031833\|Ga0310917_10314108	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300031890\|Ga0306925_10053020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4231	Open in IMG/M
3300031910\|Ga0306923_10429430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1501	Open in IMG/M
3300031945\|Ga0310913_10492398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	870	Open in IMG/M
3300031946\|Ga0310910_10978918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300032009\|Ga0318563_10204205	All Organisms → cellular organisms → Bacteria → Proteobacteria	1066	Open in IMG/M
3300032044\|Ga0318558_10040499	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	2019	Open in IMG/M
3300032055\|Ga0318575_10432697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300032091\|Ga0318577_10098652	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300033289\|Ga0310914_11757568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.85%
Host-Associated	Host-Associated	6.15%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.85%
Plants	Host-Associated → Plants	6.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.00%
Loam	Environmental → Terrestrial → Soil → Loam	23.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.77%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.54%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.77%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	25.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.08%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.54%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.77%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.77%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.77%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2035918004	Soil microbial communities from sample at FACE Site 2 North Carolina CO2-	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACENCA_3023180	2035918004	Soil	AEGRENMIADRAYSPNSLSFMDRRASLFYFAAAVPAVGFVHGPADVNRLNEAMLESYAEGCFMNHGVRLDTVAYRAD
GPIPI_01921400	2088090014	Soil	MLFRANGRENMIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLEGHAEGCFMNHGVRLDTVAYRAD
AP72_2010_repI_A01DRAFT_10560562	3300000579	Forest Soil	MIADRAYSPGFFASTDRGASLLYFTAAVPAIGFVHGPADVNPLNEAMLESYAESRFMNQRARLDTVAS*
AF_2010_repII_A01DRAFT_10765491	3300000580	Forest Soil	MLFRAEGRENMIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG*
AF_2010_repII_A1DRAFT_101603891	3300000597	Forest Soil	RFAPRTWLALGGTVQSRKAQTSTIMLFRAEGRENMIADRAYSPGSLPFMDRRASLFYFAAAVPAVGFVHGRADVNPLNEAMLESYAESCFMNHRARLDTVAYRAD*
AF_2010_repII_A001DRAFT_100518412	3300000793	Forest Soil	MLFRTGGRENMIADRAYSPGFFASTDRGASLLYFTAAVPAIGFVHGPADVNPLNEAMLESYAESRFTNQWARLDTVAS*
JGI1027J12803_1016634061	3300000955	Soil	ALGGIVESRHRPSPIMLFRANGRENMIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLEGHAEGCFMNHGVRLDTVAYRAD*
Ga0062594_1021388101	3300005093	Soil	MIADRAYSPNSFSLMARRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAEGCFMNH
Ga0066823_100501711	3300005163	Soil	MLFRAEGRENMIADRAYSPGSLPFMHRRASLFYFAAALPAVGFVHGSADVNPLNEAMLESYAESCFMNYGARLDTVAYRAG*
Ga0066388_1017385432	3300005332	Tropical Forest Soil	MLFRAEGRENMIADRAYSPGSLPFMDRRASLFYFAAAVPAVGFVHGRADVNPLNEAMLESYAESCFMNHRARLDTVAYRAD*
Ga0066388_1025538571	3300005332	Tropical Forest Soil	MTADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGAADVNPLNEAMLESYAESCFMNHGARPDTVACRAG*
Ga0066388_1027227572	3300005332	Tropical Forest Soil	MTTDRAYSPGFFASTDRGASLLYFTAAVPAIGFVHGPGDVNSFNEAMLESYAESRFTNHRARLDTVAS*
Ga0066388_1027493032	3300005332	Tropical Forest Soil	MLFRAEGSENMIADRAYSPGSLAFMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAESCFMNRGARLDTVAHRAG*
Ga0066388_1043791291	3300005332	Tropical Forest Soil	MIADRAYSPGFFASTDRGASLLYFTAAVPAIGFVHGPGDVNPLNEAMLERYAASRFMTHRARLDTVAS*
Ga0066388_1045710222	3300005332	Tropical Forest Soil	MIADRAYSPGFFASTDRGASLLCFTAAVPAIGFVHGPADVNPLNEAMLESYAESRFMNQRAR
Ga0066388_1054033781	3300005332	Tropical Forest Soil	MIADRAYSPGFFAHTDRGASLRYFTAAVPAIGFVHGPGDVNPLNEAMLKSPPESRFLNHLAKLDTVAS*
Ga0066388_1060970781	3300005332	Tropical Forest Soil	MLFRAEGRENMIADRARPPGSLPFMDRRATLFYFAAAVPAVGFVHGPADVNPLDEAMFEGYAESCFMNYGAEDRRGRSQRG*
Ga0066388_1066743401	3300005332	Tropical Forest Soil	MIADRTYSPGFFASTDPGASLLYFAAAVPAIGFVHGPGDVNPLNEAMLDSYAESRVMHHQARLDTVAS*
Ga0008090_101120702	3300005363	Tropical Rainforest Soil	MIADRAYSPGFFASTDRGASLLYFTAAVPAIGFVHGPADVNPLNEAMLESYAESRFTNQWARLDTVAS*
Ga0008090_102419723	3300005363	Tropical Rainforest Soil	MIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG*
Ga0070709_101307513	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLEGHAEGCFMNHGVRLDTVAYRAD*
Ga0070714_1001298393	3300005435	Agricultural Soil	MIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEATLEGHAEGCFMNHGVRLDTVAYRAD*
Ga0070694_1008258781	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAEGCFMNRGVRLDTVAYRAD
Ga0070708_1001410692	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIADRAYSPNSLSFMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAEGCFMNHGVRLDMVAYWAD*
Ga0070706_1000282436	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MIADRAYSPGSFSFMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAEGCFMNHGVRLDMVAYWAD*
Ga0070706_1007252582	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MLFRAEGRENMIADRAYSPNSLSFMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAEGCFMNRGVRLDTVAYRAD*
Ga0070698_1002703201	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MIADRAYSPNSLSFMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAEGCFMNRGVRLDTVAYRAD*
Ga0070697_1003567841	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MLFRAEGRENMIADRAYSPNSLSFMDRRASLFYFAATVPAVGFVHGPADVNPLNEAMLESYAEGCFMNRGVRLDTVAYRAD*
Ga0068866_104153902	3300005718	Miscanthus Rhizosphere	MLFRANGRENMIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEATLEGHAEGCFMNHGVRLDTVAYRAD*
Ga0066903_1010652051	3300005764	Tropical Forest Soil	HRPSTIMLFRTGGRENMIADRAYSPGFFASTDRGASLLYFTAAVPAIGFVHGPADVNPLNEAMLESYAENRFMNQRARLDTVAS*
Ga0066903_1015536322	3300005764	Tropical Forest Soil	MTADRAYSPGFFAHTDRGVSLRYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESRFMNHRARLDTVAS*
Ga0066903_1021871152	3300005764	Tropical Forest Soil	MIADRAYSPGSLPFMDRRASLFYFAAAVPTVGFVHGPADVNPLNEAMLESYAKRCFIPGSRLDMAVQAPTK*
Ga0066903_1075332812	3300005764	Tropical Forest Soil	MTTDRAYSPGFFASNDRGASLLYFTAAVPAIGFVHGPGDVNSLTEAMLESYAERRFTNRGARFDTVAS*
Ga0066903_1090617661	3300005764	Tropical Forest Soil	MTADRAYSPGFFASTDRGASLLYFTAAVPAIGFVHGPGDVNSLTEAMLESCAESRFTNRRARLDTVAS*
Ga0070717_102724902	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLFRANGRENMIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADMNPLSEAMLEGHAEGCFMSHGVRLDAVAYRAD*
Ga0070715_100124612	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPSPIMLFRANGRENMIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEATLEGHAEGCFMNHGVRLDTVAYRAD*
Ga0070712_1013123421	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIVNRAYSPGFSASADRGASLLYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESRFMNHRARLDTVAS*
Ga0075421_1018036151	3300006845	Populus Rhizosphere	RAYSPGFSASTDRGTSLLYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESRFMNHRARLDTVSP*
Ga0075425_1003427871	3300006854	Populus Rhizosphere	MLFRTGGRENMIVNRAYSPGFSASTDRGTSLLYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESRFMNHRARLDTVSP*
Ga0075424_1007259291	3300006904	Populus Rhizosphere	MIVNRAYSPGFSASTDRGTSLLYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESRFMNHRARLDTVSP*
Ga0114129_110823861	3300009147	Populus Rhizosphere	MLFRANGRENMIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLEGHAEGCFMNHGVRLDTVAYRAD*
Ga0075423_125252611	3300009162	Populus Rhizosphere	MLFRAEGRENMIADRAYSPNSLSFMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLEGHAEGCFMNHGVRLDTVAYRAD*
Ga0105249_110152661	3300009553	Switchgrass Rhizosphere	MLFRANGRENMIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEATLEGHAEGCFMNHGV
Ga0126374_110527212	3300009792	Tropical Forest Soil	MTADRAYSPGFFASTDRGASLLYFTAAVPVIGFVHRPGDVNSFNEAMLESYAESRFTNHRARLDTVAS*
Ga0126380_107181261	3300010043	Tropical Forest Soil	MLFRTGGRENMIADRAYSPGFFASTDRGASLLYFTAAVPAIGFVHGPADVNPLNEAMLESYAESRFMNQRARLDTVAS*
Ga0126384_104357882	3300010046	Tropical Forest Soil	MLFRAEGRENMIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTRSCFMNHGVRLDTVAYRAG*
Ga0126384_111577442	3300010046	Tropical Forest Soil	MIADHAYSPGSLAFMDRRASLFYFAAAVPAVGFVHGPADVNPFNEAMLESYAQSCFMNYGPRIDTVACQRG*
Ga0126384_116763042	3300010046	Tropical Forest Soil	YSPGFFASTDRGASLLYFTAAVPAIGFVHGPGDVNSFNEAMLESYAESRFTNHRARLDTVAS*
Ga0126382_100870673	3300010047	Tropical Forest Soil	MLFRAEGRENMIADRAYSPGSLPFIDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLQSYAESCFMNHGARLDTVAYRAG*
Ga0126373_102787263	3300010048	Tropical Forest Soil	LFRAGGRENMIADRPYSPGFFASTDRGASLLYFAAAVPAIGFVHGPGDVNPLNEAMLDSYAESRVMHHQARLDTVAS*
Ga0126373_103324592	3300010048	Tropical Forest Soil	MTADRAYSLGFFASTDRGASLLYFTAAVPAVGFVHGPGDVNSFNEAMLESYAESRFTNHRARLDTVAS*
Ga0126373_111636191	3300010048	Tropical Forest Soil	MLFRTGGRENMIADRAYSPGFFASTDRGASLLYFASAVPAIGFVHGPADVNPLNEAMLESCAESRFTNQWARLDTVAS*
Ga0126370_102891651	3300010358	Tropical Forest Soil	MLFRAEGRENMIADRAYLPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG*
Ga0126370_112112861	3300010358	Tropical Forest Soil	MTADRAYSLGFFASTDRGASLLYFTAAVPAIGFVHGPGDVNAFNDAMLESYAESRFTNHRARLDTVAS*
Ga0126376_105322491	3300010359	Tropical Forest Soil	MLFRAEGRENMIADRAYLPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAVLETTQSCFMNHGVRLDTVAYRAG*
Ga0126376_127001511	3300010359	Tropical Forest Soil	MIADRAYSPGFFASTDRGASLLYFTAAVPAIGFVHGPGDLNPLNEAMLERYAASRFMTHRARLDTVAS*
Ga0126372_112596652	3300010360	Tropical Forest Soil	MIADRAYSPGFFATTDRGASLLYFTAAVPAIGFVHGPGDVNPLNEAMLERYAENRFMTHRARLDTVAC*
Ga0126372_126044651	3300010360	Tropical Forest Soil	MIADRAYSPGFFASTDRGESLLYFTAAVPAIGFVHGPGDVNPLNEAMLDSYAESRVMHHRARLDTVAS*
Ga0126378_112751591	3300010361	Tropical Forest Soil	MLFRTGGRENMIADRAYSPGFFASTDRGESLLYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESRFMNHRARLDTVAS*
Ga0126378_124365692	3300010361	Tropical Forest Soil	MTADHAYSPGFFASTDRGASLLYFTAAVPAIGFVHGPGDVNPLNEAMLERYAASRFMTHRARLDTVAS*
Ga0126377_107748511	3300010362	Tropical Forest Soil	MLFRAEGRENMIADRAYSPRSLAFMDRRASLFYFAAAVPAVGFVHGPADVNPFNEAMLESYAQSCFMNY
Ga0126379_103691271	3300010366	Tropical Forest Soil	MLFRAEGRENMIADRAYLPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTRSCFMNHGVRLDTVAYRAG*
Ga0126379_124546701	3300010366	Tropical Forest Soil	MIADRAYSPGFFASTDRGESLLYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESRFMNHRARLDTVAS*
Ga0126379_138658541	3300010366	Tropical Forest Soil	MIADRTYSPGFFASTDRGASLLYFAAAVPAIGFVHGPGDVNPLNEAMLDSYAESRFKHHRARLDTVA
Ga0134125_118084372	3300010371	Terrestrial Soil	MLFRANGRENMIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGAADVNPLNEAMFESYAENCLMNHRARLDTVAYRTD*
Ga0126381_1012442951	3300010376	Tropical Forest Soil	MIADRTYSPGFFASTDRGASLLYFASAVPAIGFVHGPGDVNPLNEAMLDSYAESRFKHHRARLDTVAS*
Ga0126383_106142942	3300010398	Tropical Forest Soil	LNNRLFRAEGRENMIADHAYSPGSLAFMDRRASLFYFAAAVPAVGFVHGPADVNPFNEAMLESYAQSCFMNYGPRIDTVACQRG*
Ga0126383_120123272	3300010398	Tropical Forest Soil	MIADRAYSPGFFASTDRGASLLYFTAAVPAIGFVHGPGDVNPLNEAMLERYAASRFMTHGARLDTVAS*
Ga0126383_125310571	3300010398	Tropical Forest Soil	MIADRAYSPGSLPFMDRRASLFYFAAAVPTVGFVHGPADVNPLNEAMLASYAESCLMNHGSRLDTVPYRAG*
Ga0124844_12394761	3300010868	Tropical Forest Soil	MTADRAYSLGFFASTDRGASLLYFTAAVPAIGFVHGPGDVNSFNEAMLESYAESRFTNHRARLDTVAS*
Ga0137392_107756382	3300011269	Vadose Zone Soil	MLFRAEGRGNMVADRAYSPGSLAFMNRRASLFYFAAAVPAVGFVHGPADVNPLNEGMLESHAEGWFMNHGPRIDKVAYRTG*
Ga0137393_105245832	3300011271	Vadose Zone Soil	MLFRAEGRGNMVADRASSPGSLAFMDRRASLFYFAAAVPTVGFVHGPADVNPLNEGMLESHAEGWFMNHGPRIDKVAYRTG*
Ga0137360_116625721	3300012361	Vadose Zone Soil	MLFRAEGRENMIADRAYSPNSLSFMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAEGCFMNHG
Ga0137390_105605652	3300012363	Vadose Zone Soil	MLFRAEGRGNMVADRAYSPGSLAFMDRRASLFYFAAAVPTVGFVHGPADVNPLNEGMLESHAEGWFMNHGPRIDKVAYRTG*
Ga0137359_106378191	3300012923	Vadose Zone Soil	MLFRAEGRENMVADRAYSPGSLAFMDRRASLFYFAAAVPTVGFVHGPADVNPLDEGDARKLRGGRLLNYGPRIDTVAYLRLA*
Ga0126375_106134412	3300012948	Tropical Forest Soil	YSPGSLPFMDRRASLFYFAAAVPAVGFVHGRADVNPLNEAMLESYAESCFMNHRARLDTVAYRAD*
Ga0126375_112330941	3300012948	Tropical Forest Soil	MIADRAYSPGFFASTDRGASLLYFTAAMPAIGFVHGPGDVNPLNEAMLERYAASRFMTHRARLDTVAS*
Ga0164298_104796992	3300012955	Soil	MLFRANGTENMIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADMNPLSEAMLEGHAEGCFMSHGFRLDTVAYLAD*
Ga0164299_100090974	3300012958	Soil	MLFRANGTENMIADRAYSPGALAFMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLEGHAEGCFMNHGVRLDTVAYRAD*
Ga0164301_101288192	3300012960	Soil	AYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLEGHAEGCFMSHGVRLDAVAYRAD*
Ga0126369_119560151	3300012971	Tropical Forest Soil	MTADRAYSPGFFASTDRGASLLYFTAAVPAIGFVHGPGDVNSFNEAMLESYAESRFTNHRARLDTVAS*
Ga0126369_134992702	3300012971	Tropical Forest Soil	MTADRAYSPGFFAHTDRGASLRYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESRFMNHRARLDTVAS*
Ga0126369_135959091	3300012971	Tropical Forest Soil	RAYSLGFFASTDRGASLLYFTAAVPAIGFVHGPGDVNAFNDAMLESYAESRFTNHRARLDTVAS*
Ga0164309_103121281	3300012984	Soil	MLFRANGRENMIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLEGHAEGCFMSHGVRLDTVAYRAD*
Ga0157372_132731861	3300013307	Corn Rhizosphere	SPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLEGHAEGCFMNHGVRLDTVAYRAD*
Ga0182033_113065341	3300016319	Soil	MVADRAYWPGSLPFMDRRASLFYFAAAVPAVGFVHGAADVNPLNEAMLESYAESRFTNQRARLDTVAYRAS
Ga0182035_105627471	3300016341	Soil	SPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG
Ga0182035_116147271	3300016341	Soil	MLLRAEGSENMIADRAYSPGLLLFMDRRASLFYFAAAVPAVGFVHGAADVNPLNEAMLESYAENCFMNHRARLDTVAYRTD
Ga0182034_111175302	3300016371	Soil	MIADRAYSPGFFTSTDRGASLLYFTAAVPATGFVHGPGDVNPLNEAMLESCAESRFMNHRARLDTVAYRTD
Ga0182034_112846302	3300016371	Soil	RSAAQCSLGRHTSTIMLFRAEGRENMIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAENCFMNHRARLDTVAYRTD
Ga0182037_116115341	3300016404	Soil	MSADRAYSPGSLSFMDRRASLFYFAAAVPTVGFVHGPADVNTLNEAMLESYAESCLMNHRARP
Ga0182039_103583222	3300016422	Soil	MIADCAHSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG
Ga0210408_100649471	3300021178	Soil	MIADRAYSPGSLAFMDRRASLFYFAAAVPAVGFVHGSADVNPFNEAMVESHAEGWFMNHGPRIDTVACRRGKP
Ga0126371_104261342	3300021560	Tropical Forest Soil	MIADRAYSPGFFASTDRGESLLYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESRFMNHRARLDTVAS
Ga0126371_106909292	3300021560	Tropical Forest Soil	MTADRAYSLGFFASTDRGASLLYFTAAVPAIGFVHGPGDVNSFNEAMLESYAESRFTNHRARLDTVAS
Ga0126371_133407222	3300021560	Tropical Forest Soil	MIADRAYSPGFFASTDRGASLLYFTAAVPAIGFVHGPADVNPLNEAMLESYAESRFTNQWARLDTVDS
Ga0207685_100228151	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	SPIKLFRANGRENMIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEATLEGHAEGCFMNHGVRLDTVAYRAD
Ga0207684_102425892	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLFRAEGRENMIADRAYSPGSFSFMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAEGCFMNHGVRLDMVAYWAD
Ga0207684_108334611	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLFRAEGRENMIADRAYSPNSLSFMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAEGCFMNRGVRLDTVAYRAD
Ga0207646_102477222	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIADRAYSPNSLSFMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAEGCFMNRGVRLDTVAYRAD
Ga0207664_116848211	3300025929	Agricultural Soil	PSPIKLFRANGRENMIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEATLEGHAEGCFMNHGVRLDTVAYRAD
Ga0318516_102262072	3300031543	Soil	MIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG
Ga0318516_108504451	3300031543	Soil	MIADRAYSPGFFASADRGASLLYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESPFMNHRARLDTVAS
Ga0318541_100609174	3300031545	Soil	MSADRAYSPGSLSFMDRRASLFYFAAAVPTVGFVHGPADVNTLNEAMLESYAESCLMNHRARPDTVAYRTG
Ga0318541_101176452	3300031545	Soil	MLFRAEGRENMIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG
Ga0318541_102334612	3300031545	Soil	MIADRAYSPGFFTSTDRGASLLYFTAAVPAIGFVHGPGDVNPLNEAMLESCAESRFMNHRARLDTVAS
Ga0318571_104649221	3300031549	Soil	CSLGRHTSTIMLFRAEGRENMIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG
Ga0318528_101146102	3300031561	Soil	MIADRAYSPGFFASADRGASLLYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESPFMNHRSRLDTVAS
Ga0310915_108915402	3300031573	Soil	RENMIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG
Ga0318542_106005592	3300031668	Soil	MVADRAYWPGSLPFMDRRASLFYFAAAVPAVGFVHGAADVNPLNEAMLESYAENCFMNHRARLDTVAYRTD
Ga0318574_106657731	3300031680	Soil	GFFASADRGASLLYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESPFMNHRSRLDTVAS
Ga0307469_102859362	3300031720	Hardwood Forest Soil	MIADRAYSPNSFSLMDRRASLFYFAAAVPAVGFVHGPADVNPLNEAMLESYAEGCFMNHGVRLDTVAYRAD
Ga0318502_106978302	3300031747	Soil	MIADRAYSPGFFTSTDRGASLLYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESPFMNHRSRLDTVAS
Ga0318554_102631411	3300031765	Soil	AAQCSLGRHTSTIMLFRAEGRENMIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG
Ga0318508_11524722	3300031780	Soil	VSGRRERENMIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG
Ga0318529_105513822	3300031792	Soil	AYSPGSLSFMDRRASLFYFAAAVPTVGFVHGPADVNTLNEAMLESYAESCLMNHRARPDTVAYRTG
Ga0318557_102658182	3300031795	Soil	SRSAAQCSLGRHTSTIMLFRAEGRENMIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG
Ga0318523_104909262	3300031798	Soil	GLPQGLTSRSAAQCSLGRHTSTIMLFRAEGRENMIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG
Ga0318568_103816172	3300031819	Soil	MIADRAYSPGFFTSTDRGASLLYFTAAVPATGFVHGPGDVNPLNEAMLESCAESRFMNHRARLDTVAS
Ga0310917_101297173	3300031833	Soil	MIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGARLDTVAYRAGWP
Ga0310917_103141083	3300031833	Soil	MIADRAYSPGFFTSTDRGASLLYFTAAVPAIGFVHGPGDVNPLNEAMLESCAESRFMNHRARLDT
Ga0306925_100530202	3300031890	Soil	MPFRAGGRENMIADRAYSPGFFTSTDRGASLLYFTAAVPAIGFVHGPGDVNPLNEAMLESCAESRFMNHRARLDTVAS
Ga0306923_104294302	3300031910	Soil	MVADRAYWPGSLSFMDRRASLFYFAAAVPAVGFVHGAADVNPLNEAMLESYAENCFMNHRARLDTVAYRTD
Ga0310913_104923981	3300031945	Soil	PGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG
Ga0310910_109789181	3300031946	Soil	GRHTSTIMLFRAEGRENMIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGAADVNPLNEAMLESYAENCFMNHRARLDTVAYRTD
Ga0318563_102042052	3300032009	Soil	MSADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAG
Ga0318558_100404994	3300032044	Soil	FASADRGASLLYFTAAVPAIGFVHGPGDVNPLNEAMLESYAESPFMNHRARLDTVAS
Ga0318575_104326971	3300032055	Soil	MLFRAEGRENMIADRAYSPGSLSFMDRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMNHGVRLDTVAYRAGLPRCSLPYR
Ga0318577_100986521	3300032091	Soil	MMLFRAEGRENVIADRAYSPGSRSFMGRRASLFYFAAAVPAVGFVHGPADVSPLNEAMLETTQSCFMN
Ga0310914_117575681	3300033289	Soil	MLFQAEGRENMVADRAYWPGSLPFMDRRASLFYFAAAVPAVGFVHGAADVNPLNEAMLESYAENCFMNHRARRDTVAYRAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063137

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences