NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F063148

Metagenome / Metatranscriptome Family F063148

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F063148
Family Type Metagenome / Metatranscriptome
Number of Sequences 130
Average Sequence Length 59 residues
Representative Sequence MQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHIGWRYFLEK
Number of Associated Samples 121
Number of Associated Scaffolds 130

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.50 %
% of genes near scaffold ends (potentially truncated) 92.31 %
% of genes from short scaffolds (< 2000 bps) 91.54 %
Associated GOLD sequencing projects 114
AlphaFold2 3D model prediction Yes
3D model pTM-score0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (91.538 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil
(28.462 % of family members)
Environment Ontology (ENVO) Unclassified
(34.615 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(71.538 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.73%    β-sheet: 26.14%    Coil/Unstructured: 51.14%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.70
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 130 Family Scaffolds
PF00313CSD 93.85
PF00076RRM_1 1.54
PF00474SSF 0.77
PF04851ResIII 0.77


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.54 %
UnclassifiedrootN/A8.46 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001137|JGI12637J13337_1016480All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300001593|JGI12635J15846_10212796All Organisms → cellular organisms → Bacteria → Acidobacteria1268Open in IMG/M
3300002245|JGIcombinedJ26739_100857259All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300002671|Ga0005481J37269_100957All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300002681|Ga0005471J37259_101280All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300002867|Ga0006816J43186_101335All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300004101|Ga0058896_1028723All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300004103|Ga0058903_1031546All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300004104|Ga0058891_1005949All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300004136|Ga0058889_1037127All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300004139|Ga0058897_11128569All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300004467|Ga0068978_1009450All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300004470|Ga0068967_1329371All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300004471|Ga0068965_1016244All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300004471|Ga0068965_1329264All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300004472|Ga0068974_1011000All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300004473|Ga0068919_1046462All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300004474|Ga0068968_1016846All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300004474|Ga0068968_1507900All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300004476|Ga0068966_1090598All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300004489|Ga0068929_1119155All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300004506|Ga0068973_1141415All Organisms → cellular organisms → Bacteria569Open in IMG/M
3300004604|Ga0068943_1314483All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300004610|Ga0068927_1042103All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300004611|Ga0068925_1010508All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300004612|Ga0068961_1021993All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300004613|Ga0068937_1022814All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300004614|Ga0068956_1018641All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300004631|Ga0058899_10193624All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300004963|Ga0072323_1162099All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300005172|Ga0066683_10681877All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300005553|Ga0066695_10197863All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300005555|Ga0066692_10725219All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300005712|Ga0070764_10446540All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300006031|Ga0066651_10119563All Organisms → cellular organisms → Bacteria1351Open in IMG/M
3300009090|Ga0099827_11827016All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300009520|Ga0116214_1165452All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300010095|Ga0127475_1045609All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300010127|Ga0127489_1121714All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300010379|Ga0136449_104238767All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300011031|Ga0138543_142225All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300011039|Ga0138593_158676All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300011041|Ga0138591_108466All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300011047|Ga0138553_168819All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300011051|Ga0138540_108270All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300011059|Ga0138597_1081744All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300011067|Ga0138594_1122171All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300011068|Ga0138599_1072715All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300011078|Ga0138565_1095790All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300011080|Ga0138568_1180221All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300011084|Ga0138562_1194390All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300011085|Ga0138581_1045612All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300011085|Ga0138581_1203651All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300011088|Ga0138576_1177666All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300011120|Ga0150983_13351854All Organisms → cellular organisms → Bacteria → Acidobacteria606Open in IMG/M
3300011305|Ga0138532_1004281All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300012208|Ga0137376_11661639All Organisms → cellular organisms → Bacteria → Acidobacteria530Open in IMG/M
3300012285|Ga0137370_10562922All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300012388|Ga0134031_1228889All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300012407|Ga0134050_1328158All Organisms → cellular organisms → Bacteria → Acidobacteria558Open in IMG/M
3300012469|Ga0150984_105927274All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300012975|Ga0134110_10149303All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300016698|Ga0181503_1287434All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300017822|Ga0187802_10085699All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1177Open in IMG/M
3300017924|Ga0187820_1236712All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300017928|Ga0187806_1229598All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300017932|Ga0187814_10096037All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1093Open in IMG/M
3300017933|Ga0187801_10015856All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2516Open in IMG/M
3300017999|Ga0187767_10171963All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300018001|Ga0187815_10200483All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300018006|Ga0187804_10567740All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300018012|Ga0187810_10264709All Organisms → cellular organisms → Bacteria707Open in IMG/M
3300019182|Ga0184598_133650All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300019187|Ga0184584_118914All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300019189|Ga0184585_118263All Organisms → cellular organisms → Bacteria560Open in IMG/M
3300019190|Ga0184600_142224All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300019251|Ga0187795_1203573All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300019258|Ga0181504_1365621All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300019273|Ga0187794_1368535All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300019278|Ga0187800_1025479All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300019284|Ga0187797_1734900All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300019865|Ga0193748_1010871All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300020580|Ga0210403_10822018All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300022505|Ga0242647_1027401All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300022510|Ga0242652_1037663All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300022531|Ga0242660_1164079All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300022531|Ga0242660_1226384All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300022532|Ga0242655_10180088All Organisms → cellular organisms → Bacteria636Open in IMG/M
3300022532|Ga0242655_10209521All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300022712|Ga0242653_1086170All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300022712|Ga0242653_1103628All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300022716|Ga0242673_1093198All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300022716|Ga0242673_1103368All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300022716|Ga0242673_1104300All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300022717|Ga0242661_1125349All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300023662|Ga0247545_103297All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300025625|Ga0208219_1083752All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300027634|Ga0209905_1038968Not Available727Open in IMG/M
3300027674|Ga0209118_1119343All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300027696|Ga0208696_1040044All Organisms → cellular organisms → Bacteria → Acidobacteria1670Open in IMG/M
3300027889|Ga0209380_10607010All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300029636|Ga0222749_10655725All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300029701|Ga0222748_1090264All Organisms → cellular organisms → Bacteria583Open in IMG/M
3300030528|Ga0210277_10916804All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300030623|Ga0265392_1226153All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300030629|Ga0210268_1231009All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300030840|Ga0074020_11034488All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300030862|Ga0265753_1119877All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300030882|Ga0265764_113237All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300030913|Ga0265759_107891All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300030950|Ga0074034_11233096All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300031023|Ga0073998_10072043All Organisms → cellular organisms → Bacteria → Acidobacteria557Open in IMG/M
3300031043|Ga0265779_108170All Organisms → cellular organisms → Bacteria609Open in IMG/M
3300031057|Ga0170834_113990256All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300031081|Ga0308185_1046644All Organisms → cellular organisms → Bacteria → Acidobacteria552Open in IMG/M
3300031231|Ga0170824_104420752All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300032028|Ga0316052_113721All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300032119|Ga0316051_1021845All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300034447|Ga0370544_10202All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300034681|Ga0370546_091249All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium519Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil28.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil19.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.54%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil10.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment6.15%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.62%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.85%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.08%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland3.08%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.54%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.54%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.54%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.77%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.77%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.77%
Thawing PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost0.77%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog0.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.77%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.77%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001137Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002671Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF130 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300002681Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF120 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300002867Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 17 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300004101Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004103Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF242 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004104Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004136Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF214 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004139Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004467Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 75 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004470Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004471Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004472Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004473Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004474Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004476Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004489Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 14 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004506Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 70 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004604Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 31 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004610Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 12 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004611Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 10 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004612Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004613Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 25 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004614Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 48 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004963Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 20 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009520Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaGEnvironmentalOpen in IMG/M
3300010095Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010127Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011031Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 24 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011039Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 20 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011041Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 17 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011047Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 34 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011051Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 21 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011059Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 44 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011067Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 41 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011068Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 67 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011078Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011080Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011084Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 47 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011085Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011088Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011305Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 10 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012388Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012410Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300016698Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017924Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5EnvironmentalOpen in IMG/M
3300017928Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1EnvironmentalOpen in IMG/M
3300017932Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017999Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MGEnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018012Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5EnvironmentalOpen in IMG/M
3300019182Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019187Soil microbial communities from Bohemian Forest, Czech Republic ? CSU2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019189Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019190Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019251Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019258Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019273Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019278Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019284Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019865Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300022505Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022510Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022532Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022712Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022716Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023662Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025625Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300027634Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812S1MEnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027696Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030528Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030623Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE043SO (Eukaryote Community Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300030629Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030840Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - LB 8 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030855Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030862Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030882Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030913Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030950Metatranscriptome of forest soil microbial communities from Dalarna County, Sweden - Site 2 - Mineral N3 (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031022Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031023Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031043Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031081Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031788Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2EnvironmentalOpen in IMG/M
3300032028Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032119Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300034447Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034681Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12637J13337_101648013300001137Forest SoilMHDESKASFAVIRHNVRTYESGGVMIVIKGRTTAESALVQFERSQTSE
JGI12635J15846_1021279613300001593Forest SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEVVLKQFEQSQTSEDRHIGWRYFLEKTDLKA
JGIcombinedJ26739_10085725923300002245Forest SoilMQSESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHIGWR
Ga0005481J37269_10095723300002671Forest SoilMHAESKGSFAVIRYNLRTYESGGVMAVIKGKESAESVLKQFEQSQTSDDRHIGW
Ga0005471J37259_10128033300002681Forest SoilMQPESKGSFAVIRYNLRTYESGGVMAVIKGRETAESILKQFEQSQTSEDRHIGWRYFLEKTDLKV
Ga0006816J43186_10133523300002867Peatlands SoilMQSEAKSSFAVIRYNLRTYESGGVMAVIKGKESAEAILKQFEQSQSSEDRHIG
Ga0058896_102872313300004101Forest SoilMQPESKGSFAVIRYNLRTYESGGVMAVIKGRETAESILKQFEQSQTSEDRHI
Ga0058903_103154613300004103Forest SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEVVLKQFEQSQTSEDRHIGWRYF
Ga0058891_100594913300004104Forest SoilMQLESKGSFAVIRYNLRTYESGGVMAVIRGKESAEVVLKQFEQSQTSDDRHIGWRYFLEKTDLKAGMD
Ga0058889_103712723300004136Forest SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRENAESILKQFEQSQTSEDRHIGWRYFL
Ga0058897_1112856923300004139Forest SoilMPGESKASFAVIRYNLRTYESGGVMAVIRGRETAESILKQFEQSQSSEDRHVGWRYFLEKTDLRPGMDP
Ga0068978_100945023300004467Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSDDRHIGWRYFLEKTDLKAGMDP
Ga0068967_132937123300004470Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEGVLKQFEQSQTSEDRHIGWRY
Ga0068965_101624413300004471Peatlands SoilMSGDSKGSFAVIRYNLRTYESGGVMAVIRGRETAESILKQFEQSQSSDDRHIGWRYFLEK
Ga0068965_132926413300004471Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSDDRHIGWRYFLEK
Ga0068974_101100013300004472Peatlands SoilMQTESKGSFAVIRYNLRTYESGGVMAVIKGRETAEAILKQFEQSQTSED
Ga0068919_104646223300004473Peatlands SoilMQSEAKSSFAVIRYNLRTYESGGVMAVIKGKESAEAILKQFEQSQSSEDRHIGWRYFLE
Ga0068968_101684623300004474Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSDDRHIGWRYFLEKTDL
Ga0068968_150790023300004474Peatlands SoilMSGDSKGSFAVIRYNLRTYESGGVMAVIRGRETAESILKQFEQSQSSDDRHIGWRYFLEKTDL
Ga0068966_109059823300004476Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSDDRHIGWRYFL
Ga0068929_111915523300004489Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEGVLKQFEQSQTSEDRHIG
Ga0068973_114141513300004506Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIRGKESAEAVLKQFEQSQTSDDRHIGWRYFP
Ga0068943_131448323300004604Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHIGWRYFLEKTDLKAGMDP
Ga0068927_104210323300004610Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAETVLKQFEQSQTSEDRHIGWRYFLEKTDLK
Ga0068925_101050823300004611Peatlands SoilMQSEAKSSFAVIRYNLRTYESGGVMAVIKGKESAEAILKQFEQSQSSED
Ga0068961_102199313300004612Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSEDRHIGW
Ga0068937_102281413300004613Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAETVLKQFEQSQTSEDRHIGCRYFLEKTD
Ga0068956_101864123300004614Peatlands SoilMQSEAKSSFAVIRYNLRTYESGGVMAVIKGKESAEAILKQFEQSQSSEDRHT
Ga0058899_1019362423300004631Forest SoilMQAESKSSFAVIRYNLRTYESGGVMAVIKGRENAESILKQFEQSQTSDDRHIGWRYFLEKTDL
Ga0072323_116209923300004963Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAETVLKQFEQSQTSEDRHIGWRYF
Ga0066683_1068187733300005172SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAEITLKTLEGQQSSEDRHEGWRYFLEKTDLK
Ga0065715_1079915423300005293Miscanthus RhizosphereVPLTRDESKASYAIIRHNVRTYESGGVVLVVKGRDNAEARVKHFETGQSSEDRHAGWRYFVEKSDLKAGMDPAEATNLRQMK
Ga0066701_1019691433300005552SoilVSLTRDESKASFAIIRHNIRTYESGGVVAVIKGRDNAKLEVEHFEAGQNAEDRHAGWRYFLEKTHLKAGMDPEEA
Ga0066695_1019786343300005553SoilVQYLGCFRMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAEMTLKSLEGQQSSEDRHEGWRYFLEKTDLK
Ga0066692_1072521933300005555SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAEMTLKSLEGQQSSEDRHEGW
Ga0070764_1044654013300005712SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHIGWRYF
Ga0066651_1011956343300006031SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKANAETTLKSLEVQQSSEDRHEGWRYFLEKTDL
Ga0099827_1143135823300009090Vadose Zone SoilVPLTRDESKASFAIIRHNIRTYESGGVVAVIKGRDNAKLEVEHFEAGQGTEDRHAGWRYFLEKTHLKAGMN
Ga0099827_1182701613300009090Vadose Zone SoilMRNESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAETTLKSLEGQQSSEDRHEGWR
Ga0116214_116545223300009520Peatlands SoilMSGDSKGSFAVIRYNLRTYESGGVMAVIRGRETAESILKQFEQSQSSDDRHIGW
Ga0127475_104560913300010095Grasslands SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAEMTLKSLEGQQSSED
Ga0127489_112171413300010127Grasslands SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAETTLKSLEGQQSSEDRHEGWRYFLEKTDLKA
Ga0136449_10423876723300010379Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSDDRHIGWRYFLE
Ga0138543_14222513300011031Peatlands SoilMESSDMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEPVLKQFEQSQTSDDRHIGWRYFL
Ga0138593_15867623300011039Peatlands SoilMESSDMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAETVLKQFEQSQTSEDRHIGWRYFLEKTD
Ga0138591_10846613300011041Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEGVLKQFEQSQTSEDRHIGWRYFLE
Ga0138553_16881913300011047Peatlands SoilMQSEAKSSFAFIRYNLRTYESGGVMAVIKGKESAEAILKQFEQSQSSEDRHI
Ga0138540_10827023300011051Peatlands SoilMQSEAKSSFAVIRYNLRTYESGGVMAVIKGKESAEAILKQFEQSQSSEERHIGWRYFLEK
Ga0138597_108174413300011059Peatlands SoilMQSEAKSSFAVIRYNLRTYESGGVMAVIKGKESAEAILKQFEQSQSSEDRHIGWRYFLEKTDLKA
Ga0138594_112217113300011067Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSDDRHIGWRYFLEKTD
Ga0138599_107271523300011068Peatlands SoilMQTESKGSFAVIRYNLRTYESGGVMAVIKGRETAEAILKQFEQSQSSEDRHIGWRYFLEK
Ga0138565_109579013300011078Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSLTSEDRHIGWRYFLEKTD
Ga0138568_118022123300011080Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHIGWRYFLEK
Ga0138562_119439013300011084Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAETVLKKFEQSQTS
Ga0138581_104561213300011085Peatlands SoilMQTESKGSFAVIRYNLRTYESGGVMAVIKGRETAEAILKQFEQSQTSEDRHIGWRYFL
Ga0138581_120365123300011085Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHIVWRYFLEK
Ga0138576_117766623300011088Peatlands SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSDDRHIGWRYFLEKTDLKT
Ga0150983_1335185423300011120Forest SoilMEFFRMQPESKGSFAVIRYNLRTYESGGVMAVIKGRETAESILKQFEQSQTSEDRHIGWRYFLEKTDLKVGM
Ga0138532_100428123300011305Peatlands SoilMQSEAKSSFAVIRYNLRTYESGGVMAVIKGKESAEAILKQFEQSQSSEDRHI
Ga0137376_1166163923300012208Vadose Zone SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKANAETTLKSLEVQQSSEDRHEGWRYFLEKTDLKAG
Ga0137370_1056292233300012285Vadose Zone SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAETTLKSLEGQQSSEDRHEGWRYFLEKTE
Ga0134031_122888923300012388Grasslands SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAEMTLKSLEGQQSSEDRHEGWRYF
Ga0134050_132815823300012407Grasslands SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAEMTLKSLEGQQSSEDRHEGWRYFLEKTD
Ga0134060_122134223300012410Grasslands SoilVPLTRDESKASYAIIRHNVRTYESGGVVLVVKGRENAEARVKHFETGQSSEDRHAGWRYFVEKSDLKA
Ga0150984_10592727433300012469Avena Fatua RhizosphereMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKANAETTLKSLEVQQSSEDRHEGWRYFL
Ga0134110_1014930313300012975Grasslands SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKANAETTLKSLEVQQSSEDRHEGWRYFLEKTD
Ga0181534_1006005413300014168BogLKDDSKACFAIIRHNVRTYESGGVVAVVKGRMEAEVALKQYEVGQNGDEKHAGWRYFLEKSDLKAGIDPDR
Ga0181503_128743423300016698PeatlandMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHIGWRYFLEKTD
Ga0187802_1008569933300017822Freshwater SedimentMSGDSKGSFAVIRYNLRTYESGGVMAVIRGRETAEAILKQFEQSQSSDDRHIGWRYFLE
Ga0187820_123671223300017924Freshwater SedimentMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAETVLKQFEQSQTSEDRHIGWRY
Ga0187806_122959823300017928Freshwater SedimentMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAETVLKQFEQSQTSEDR
Ga0187814_1009603733300017932Freshwater SedimentMLTMQGEAKSSFALVRYNARTYDSGGVMAVIKGREEAEAVQKQFERSQDSLDRDAGWRYFLEK
Ga0187801_1001585613300017933Freshwater SedimentMLTMQGEAKSSFALVRYNARTYDSGGVMAVIKGREEAEAVQKQFERSQDSLDRDAG
Ga0187767_1017196313300017999Tropical PeatlandMQTETKASFAVVRYNARTYESGGVMIVIRGRESAEATLKQFERSQSSEERNA
Ga0187815_1020048323300018001Freshwater SedimentMQGEAKSSFALVRYNARTYDSGGVMAVIKGREEAEAVQKQFERSQDSLDRDAG
Ga0187804_1056774013300018006Freshwater SedimentMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSDDRHIGW
Ga0187810_1026470923300018012Freshwater SedimentMSGDSKGSFAVIRYNLRTYESGGVMAVIRGRDSAEAILKQFEQSQNSDDLHLGGRHLLENPGLKAG
Ga0184598_13365013300019182SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTS
Ga0184584_11891413300019187SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSDDRHIG
Ga0184585_11826323300019189SoilMQAESKGSFAIIRYNLRTYESGGVMAVIKGKESAEAVVKQFEQSQTSEDR
Ga0184600_14222423300019190SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSEDRHIGWRYFLEK
Ga0187795_120357323300019251PeatlandMQTETKASFAVVRYNARTYESGGVMIVIRGRESAEATLKQFERSQSSEERNAGWRYFLEKTN
Ga0181504_136562133300019258PeatlandMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHIGWRYFLEKTDLKAGMD
Ga0187794_136853523300019273PeatlandMRTESKGSFAVIRYNFRTYESGGVMAVIRGKESAETVLKQFEQSQSSDDRHTGWRYFL
Ga0187800_102547913300019278PeatlandMQGEAKSSFALVRYNARTYDSGGVMAVIKGREEAEAVLKQFERTQDSLDRDAGWRYFLEKTDLKA
Ga0187797_173490013300019284PeatlandMQGEAKSSFALVRYNARTYDSGGVMAVIKGREEAESVLKQFERSQDSLDRDAGWRYFLEK
Ga0193748_101087123300019865SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAEMTLKSLEGQQSSEDRHEG
Ga0210403_1082201823300020580SoilMQPESKGSFAVIRYNLRTYESGGVMAVIKGRETAESILKQFEQSQTSEDRHIGWR
Ga0210406_1061894313300021168SoilMQDESKVSFAVIRHNVRTYESGGVVAVIKGRTPAETVLSQQERSQSSEDRHPGWRYFLEKTDLRAGMDP
Ga0242647_102740113300022505SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSEDRHIGWRYFLEKTDLKAGM
Ga0242652_103766313300022510SoilMQPESKGSFAVIRYNLRTYESGGVMAVIKGRETAESILKQFEQSQTSEDRHIGWRYFL
Ga0242660_116407913300022531SoilMQDESKASFAVIRHNVRTYESGGVMIVIKGRTTAESALGQFERSQTSEDRHAGWRYFLEK
Ga0242660_122638423300022531SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSDDRHIGWRYFLEKTDLKA
Ga0242655_1018008813300022532SoilMLAESKGSFAVIRYNLRTYESGGVMAVIKGRENAESILKQFEQSQTSEDRHIGWRYFLE
Ga0242655_1020952113300022532SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHIGWRYFLEKTDLKA
Ga0242653_108617013300022712SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHI
Ga0242653_110362813300022712SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSEDRHIG
Ga0242673_109319823300022716SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHIGW
Ga0242673_110336823300022716SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHIGWRYFLEKTDLK
Ga0242673_110430013300022716SoilMQPESKGSFAVIRYNLRTYESGGVMAVIKGRETAESILKQFEQSQTSED
Ga0242661_112534913300022717SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSEDRHIGWRYFLEKTDLK
Ga0247545_10329723300023662SoilMQPESKGSFAVIRYNLRTYESGGVMAVIKGKESAESVLKQFEQSQTSEDR
Ga0208219_108375213300025625Arctic Peat SoilMQDDSKASFALIRHNVRTYESGGVMAVIKGRVNAESSVGQFERSQTSEDRHAGWRYFLEKTDLKVG
Ga0209905_103896833300027634Thawing PermafrostMCIRDRSKGSFAVIRYNLRTYESGGVMAVIKGRETAEAILKQFEQSQTSEDRHIGWRYFL
Ga0209118_111934313300027674Forest SoilMHDESKASFAVIRHNVRTYESGGVMIVIKGRTTAESALVQFERSQTSEDRHAGWRYF
Ga0208696_104004413300027696Peatlands SoilMQSEAKSSFAVIRYNLRTYESGGVMAVIKGKESAEAILKQFEQSQSSEDRHIGWRYFLEK
Ga0209380_1060701013300027889SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAESVLKQFEQSQTSEDRHIGWRYFLEKTDLKAGMDPA
Ga0222749_1065572523300029636SoilMPLESKGSFAVIRYNLRTYQSGGVMAVIKGKESAEVVLKQFEQSQTSEDR
Ga0222748_109026423300029701SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHIGWRYFLE
Ga0210277_1091680423300030528SoilMQAESKGSFAIIRYNLRTYESGGVMAVIKGKESAEAVVKQFEQSQTSEDRHIGWRYFL
Ga0265392_122615313300030623SoilMQAESKGSFAIIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSDD
Ga0210268_123100923300030629SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRENAESVLKQFEQSQTSEDRHIGWRYFLEKTDLKVGMD
Ga0074020_1103448813300030840SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAEAVLKQFEQSQTSEDRHIGWRYFLEKTKKKRKKETEE
Ga0075374_1008732013300030855SoilMQDESKASFAVIRHNVRTYESGGVMIVIKGRTTAESALSQFERSQTSEDRHAGWRYFLEKTDLKAGM
Ga0265753_111987713300030862SoilMPVEAKSSFAVIRYNLRTYESGGVMAVIKGRETAESILKQFEQSQTSEDRHIGWRYFLEK
Ga0265764_11323713300030882SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGKESAESVLKQFEQSQTSEDRHI
Ga0265759_10789123300030913SoilMQPESKGSFAVIRYNLRTYESGGVMAVIKGRETAESILKQFEQSQTSEDRHIGWRYFLEK
Ga0074034_1123309623300030950SoilMQPESKGSFAVIRYNLRTYESGGVMAVIKGKESAEVVLKQFEQSQTSEDRHIGWRYFL
Ga0073994_1216914033300030991SoilMQDDSKACFAIIRHNVRTYESGGVVAVIKGRTVAENILNQQEKGQGSEDRHAGWRYFLEKTDLRPGMDPT
Ga0138301_118179813300031022SoilMQDDSKACFAIIRHNVRTYESGGVVAVIKGRTTAENILSQQEKGQGSEDRHAGWRYFLEKTDLKPGMDPVEA
Ga0073998_1007204323300031023SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAEMTLKSLEGQQSSEDRHEGWRYFLEK
Ga0265779_10817013300031043SoilMQAESKGSFAIIRYNLRTYESGGVMAVIKGKESAEAVVKQFEQSQTSEDRHIGWRYFLEKTDLKAGMDP
Ga0170834_11399025613300031057Forest SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSEDRQM
Ga0308185_104664413300031081SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAEMTLKSLEGQQSSEDRHEGWRYFLEKTDLKAGMD
Ga0170824_10442075223300031231Forest SoilMRAESKGSFAVIRHNIRTYESGGVMAVIRGKDSAETVLKQFEQSQTSED
Ga0302319_1125438713300031788BogLKDDSKACFAIIRHNVRTYESGGVVAVVKGRMEAEVALKQYEVGQNGDEKHAGWRYFLEKSDLKAGIDP
Ga0316052_11372133300032028SoilMQAESKGSFAVIRYNLRTYESGGVMAVIKGRESAEAVLKQFEQSQTSE
Ga0316051_102184533300032119SoilMQPESKGSFAVIRYNLRTYESGGVMAVIKGKESAESVLKQFEQSQTSEDRHIGWRYFLEKTD
Ga0370544_10202_542_6913300034447SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAETTLKTLEVQQSSEDR
Ga0370546_091249_3_1643300034681SoilMRDESKGSFAVIRYNLRTYVSGGVVAIIKGKSNAETTLKSLEGQQSSEDRHEGW

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.