Metagenome Family F063447

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F063447
Family Type	Metagenome
Number of Sequences	129
Average Sequence Length	84 residues
Representative Sequence	MERKLAEQIVALVNAHVDQLISSLEPVEAEISAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDEDSEPTEAAEPRTSRN
Number of Associated Samples	91
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.95 %
% of genes near scaffold ends (potentially truncated)	29.46 %
% of genes from short scaffolds (< 2000 bps)	86.05 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (72.093 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (30.233 % of family members)
Environment Ontology (ENVO)	Unclassified (29.457 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.186 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.10% β-sheet: 0.00% Coil/Unstructured: 46.90%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.65
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF01380	SIS	34.88
PF04055	Radical_SAM	3.88
PF00144	Beta-lactamase	3.88
PF00331	Glyco_hydro_10	3.88
PF13522	GATase_6	2.33
PF06282	DUF1036	1.55
PF01938	TRAM	1.55
PF00563	EAL	1.55
PF13414	TPR_11	1.55
PF03466	LysR_substrate	1.55
PF13088	BNR_2	0.78
PF13418	Kelch_4	0.78
PF04851	ResIII	0.78
PF13432	TPR_16	0.78
PF11006	DUF2845	0.78
PF12158	DUF3592	0.78
PF07715	Plug	0.78
PF04616	Glyco_hydro_43	0.78
PF00430	ATP-synt_B	0.78
PF13673	Acetyltransf_10	0.78
PF00701	DHDPS	0.78
PF13417	GST_N_3	0.78
PF08241	Methyltransf_11	0.78
PF01568	Molydop_binding	0.78
PF00857	Isochorismatase	0.78
PF02018	CBM_4_9	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	3.88
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	3.88
COG2367	Beta-lactamase class A	Defense mechanisms [V]	3.88
COG3693	Endo-1,4-beta-xylanase, GH35 family	Carbohydrate transport and metabolism [G]	3.88
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	1.55
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	1.55
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	1.55
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	1.55
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	1.55
COG5480	Uncharacterized membrane protein	Function unknown [S]	1.55
COG0711	FoF1-type ATP synthase, membrane subunit b or b'	Energy production and conversion [C]	0.78
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.78
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.09 %
Unclassified	root	N/A	27.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.09 %
Unclassified	root	N/A	27.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.09 %
Unclassified	root	N/A	27.91 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	45.74 %
Unclassified	root	N/A	27.91 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	11.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.10 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.78 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.33 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.55 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.33 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	0.78 %
Burkholderiales genera incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
Xylophilus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Xylophilus	0.78 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.33 %
Xylophilus ampelinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Xylophilus → Xylophilus ampelinus	0.78 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.91 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	2.33 %
Bradyrhizobium sp. CCBAU 051011	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	0.78 %
Xylophilus ampelinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Xylophilus → Xylophilus ampelinus	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
uncultured Armatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	0.78 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_100334671	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300003267\|soilL1_10070632	All Organisms → cellular organisms → Bacteria → Proteobacteria	1481	Open in IMG/M
3300004153\|Ga0063455_100810630	Not Available	650	Open in IMG/M
3300004463\|Ga0063356_100335974	All Organisms → cellular organisms → Bacteria → Proteobacteria	1899	Open in IMG/M
3300004463\|Ga0063356_104663302	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300004643\|Ga0062591_102530112	Not Available	540	Open in IMG/M
3300005093\|Ga0062594_101244274	All Organisms → cellular organisms → Bacteria → Proteobacteria	742	Open in IMG/M
3300005290\|Ga0065712_10387465	All Organisms → cellular organisms → Bacteria → Proteobacteria	745	Open in IMG/M
3300005293\|Ga0065715_11037115	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005331\|Ga0070670_100361476	All Organisms → cellular organisms → Bacteria → Proteobacteria	1276	Open in IMG/M
3300005339\|Ga0070660_100769234	All Organisms → cellular organisms → Bacteria → Proteobacteria	809	Open in IMG/M
3300005340\|Ga0070689_100718219	Not Available	874	Open in IMG/M
3300005341\|Ga0070691_10219469	All Organisms → cellular organisms → Bacteria → Proteobacteria	1007	Open in IMG/M
3300005343\|Ga0070687_100413494	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300005347\|Ga0070668_101801386	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005354\|Ga0070675_101425211	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300005367\|Ga0070667_100678961	All Organisms → cellular organisms → Bacteria → Proteobacteria	952	Open in IMG/M
3300005439\|Ga0070711_100912446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	750	Open in IMG/M
3300005455\|Ga0070663_100294614	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300005466\|Ga0070685_10390456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	961	Open in IMG/M
3300005548\|Ga0070665_101039695	All Organisms → cellular organisms → Bacteria → Proteobacteria	831	Open in IMG/M
3300005836\|Ga0074470_10714222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	3761	Open in IMG/M
3300006844\|Ga0075428_100686534	All Organisms → cellular organisms → Bacteria → Proteobacteria	1091	Open in IMG/M
3300006894\|Ga0079215_10480737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	767	Open in IMG/M
3300006954\|Ga0079219_10889488	All Organisms → cellular organisms → Bacteria → Proteobacteria	718	Open in IMG/M
3300007004\|Ga0079218_10209959	All Organisms → cellular organisms → Bacteria → Proteobacteria	1495	Open in IMG/M
3300007004\|Ga0079218_11270772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	771	Open in IMG/M
3300007004\|Ga0079218_11308597	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300007004\|Ga0079218_11353993	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300009553\|Ga0105249_12873071	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300010399\|Ga0134127_12943368	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300010400\|Ga0134122_11370690	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300011442\|Ga0137437_1256020	Not Available	604	Open in IMG/M
3300012212\|Ga0150985_107067389	Not Available	544	Open in IMG/M
3300012469\|Ga0150984_108826322	Not Available	663	Open in IMG/M
3300012883\|Ga0157281_1011391	Not Available	997	Open in IMG/M
3300012943\|Ga0164241_10093111	All Organisms → cellular organisms → Bacteria → Proteobacteria	2167	Open in IMG/M
3300012943\|Ga0164241_10145281	All Organisms → cellular organisms → Bacteria → Proteobacteria	1698	Open in IMG/M
3300012943\|Ga0164241_10314569	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1120	Open in IMG/M
3300012943\|Ga0164241_10468888	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300012944\|Ga0137410_10159089	Not Available	1726	Open in IMG/M
3300013308\|Ga0157375_12375551	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300014326\|Ga0157380_10385443	Not Available	1324	Open in IMG/M
3300014745\|Ga0157377_10809159	All Organisms → cellular organisms → Bacteria → Proteobacteria	692	Open in IMG/M
3300015200\|Ga0173480_10148412	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300015371\|Ga0132258_12507926	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300017965\|Ga0190266_10951056	Not Available	570	Open in IMG/M
3300018422\|Ga0190265_10395630	All Organisms → cellular organisms → Bacteria	1479	Open in IMG/M
3300018465\|Ga0190269_10459804	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300018469\|Ga0190270_10238677	Not Available	1571	Open in IMG/M
3300018469\|Ga0190270_12192227	Not Available	613	Open in IMG/M
3300018476\|Ga0190274_10005239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7786	Open in IMG/M
3300018476\|Ga0190274_10011919	All Organisms → cellular organisms → Bacteria → Proteobacteria	5433	Open in IMG/M
3300018476\|Ga0190274_10154635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1943	Open in IMG/M
3300018476\|Ga0190274_10766744	Not Available	1018	Open in IMG/M
3300018476\|Ga0190274_12463849	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300018476\|Ga0190274_12507565	Not Available	613	Open in IMG/M
3300018481\|Ga0190271_10114737	All Organisms → cellular organisms → Bacteria → Proteobacteria	2519	Open in IMG/M
3300018481\|Ga0190271_10188456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2039	Open in IMG/M
3300018481\|Ga0190271_10457325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1381	Open in IMG/M
3300019361\|Ga0173482_10121024	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300019377\|Ga0190264_12357836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	501	Open in IMG/M
3300020027\|Ga0193752_1012699	All Organisms → cellular organisms → Bacteria → Proteobacteria	4314	Open in IMG/M
3300020027\|Ga0193752_1091440	All Organisms → cellular organisms → Bacteria → Proteobacteria	1256	Open in IMG/M
3300021078\|Ga0210381_10279729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300022549\|Ga0212091_10052512	All Organisms → cellular organisms → Bacteria → Proteobacteria	1481	Open in IMG/M
3300022915\|Ga0247790_10023839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1326	Open in IMG/M
3300022917\|Ga0247777_1024260	All Organisms → cellular organisms → Bacteria → Proteobacteria	2246	Open in IMG/M
3300022917\|Ga0247777_1053204	Not Available	1429	Open in IMG/M
3300023070\|Ga0247755_1052176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 051011	839	Open in IMG/M
3300023079\|Ga0247758_1013297	All Organisms → cellular organisms → Bacteria → Proteobacteria	2207	Open in IMG/M
3300023169\|Ga0247762_1012726	Not Available	2344	Open in IMG/M
3300023272\|Ga0247760_1113900	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300023275\|Ga0247776_10228393	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300025918\|Ga0207662_10155112	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1459	Open in IMG/M
3300025919\|Ga0207657_10197265	All Organisms → cellular organisms → Bacteria → Proteobacteria	1621	Open in IMG/M
3300025926\|Ga0207659_11144115	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300025928\|Ga0207700_11472101	Not Available	604	Open in IMG/M
3300025930\|Ga0207701_11439161	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300025931\|Ga0207644_10126569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → environmental samples → uncultured Armatimonadetes bacterium	1951	Open in IMG/M
3300025932\|Ga0207690_11785388	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300025933\|Ga0207706_10276114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1466	Open in IMG/M
3300025936\|Ga0207670_10178684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1597	Open in IMG/M
3300025936\|Ga0207670_11430095	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300025942\|Ga0207689_10941988	Not Available	729	Open in IMG/M
3300025942\|Ga0207689_11657224	Not Available	531	Open in IMG/M
3300025945\|Ga0207679_10468815	Not Available	1119	Open in IMG/M
3300026023\|Ga0207677_11447264	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300026067\|Ga0207678_11354549	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300026067\|Ga0207678_11724094	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300027886\|Ga0209486_10906977	All Organisms → cellular organisms → Bacteria → Proteobacteria	585	Open in IMG/M
3300027886\|Ga0209486_10926272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Xylophilus → Xylophilus ampelinus	580	Open in IMG/M
3300027886\|Ga0209486_10998460	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300027886\|Ga0209486_11047833	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300028379\|Ga0268266_10937536	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300028592\|Ga0247822_10482142	Not Available	979	Open in IMG/M
3300031184\|Ga0307499_10266834	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300031456\|Ga0307513_10041704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5062	Open in IMG/M
3300031548\|Ga0307408_100051413	All Organisms → cellular organisms → Bacteria → Proteobacteria	2968	Open in IMG/M
3300031548\|Ga0307408_100383649	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300031548\|Ga0307408_101642433	Not Available	611	Open in IMG/M
3300031562\|Ga0310886_10218800	Not Available	1049	Open in IMG/M
3300031731\|Ga0307405_10203431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1440	Open in IMG/M
3300031740\|Ga0307468_101060933	Not Available	718	Open in IMG/M
3300031824\|Ga0307413_10330347	Not Available	1168	Open in IMG/M
3300031824\|Ga0307413_10755349	Not Available	813	Open in IMG/M
3300031892\|Ga0310893_10062224	Not Available	1275	Open in IMG/M
3300031903\|Ga0307407_11298541	Not Available	571	Open in IMG/M
3300031908\|Ga0310900_10085875	All Organisms → cellular organisms → Bacteria → Proteobacteria	1975	Open in IMG/M
3300031938\|Ga0308175_102400804	Not Available	591	Open in IMG/M
3300031996\|Ga0308176_12118100	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300032005\|Ga0307411_10120252	Not Available	1898	Open in IMG/M
3300032013\|Ga0310906_10871984	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300032075\|Ga0310890_10205545	Not Available	1354	Open in IMG/M
3300032126\|Ga0307415_102015667	Not Available	562	Open in IMG/M
3300032144\|Ga0315910_10035672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3641	Open in IMG/M
3300032144\|Ga0315910_10058243	All Organisms → cellular organisms → Bacteria → Proteobacteria	2810	Open in IMG/M
3300032144\|Ga0315910_10077428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2427	Open in IMG/M
3300032144\|Ga0315910_10144721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1766	Open in IMG/M
3300032144\|Ga0315910_10157162	All Organisms → cellular organisms → Bacteria → Proteobacteria	1694	Open in IMG/M
3300032144\|Ga0315910_10547349	All Organisms → cellular organisms → Bacteria → Proteobacteria	895	Open in IMG/M
3300032144\|Ga0315910_11305166	Not Available	566	Open in IMG/M
3300032144\|Ga0315910_11579919	Not Available	511	Open in IMG/M
3300032157\|Ga0315912_10001742	All Organisms → cellular organisms → Bacteria → Proteobacteria	25454	Open in IMG/M
3300032157\|Ga0315912_10004038	All Organisms → cellular organisms → Bacteria → Proteobacteria	14130	Open in IMG/M
3300032157\|Ga0315912_10005929	All Organisms → cellular organisms → Bacteria → Proteobacteria	11087	Open in IMG/M
3300032157\|Ga0315912_10204998	Not Available	1548	Open in IMG/M
3300032157\|Ga0315912_10710317	Not Available	800	Open in IMG/M
3300032157\|Ga0315912_11415051	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.22%
Host-Associated	Host-Associated	31.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.12%
Plants	Host-Associated → Plants	31.78%
Aquatic	Environmental → Aquatic	3.10%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.98%
Plant Litter	Environmental → Terrestrial → Plant Litter	5.43%
Freshwater	Environmental → Aquatic → Freshwater	1.55%
Sediment	Environmental → Aquatic → Sediment	1.55%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.18%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.85%
Loam	Environmental → Terrestrial → Soil → Loam	7.75%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	5.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.18%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.20%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	5.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	30.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	7.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.20%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	5.43%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.33%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.55%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.78%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.78%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.78%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022549	Cold Creek_combined assembly	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300022917	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L154-409C-5	Environmental	Open in IMG/M
3300023070	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L096-311B-4	Environmental	Open in IMG/M
3300023079	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L156-409C-4	Environmental	Open in IMG/M
3300023169	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L081-202R-4	Environmental	Open in IMG/M
3300023272	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L171-409R-4	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031456	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM	Host-Associated	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1003346711	3300000956	Soil	MERKLAEQIVAMVNAHVDQLISSLEPVEAQISAEEFAGYKRGVARVLSAYDAEIIDRVAREYPDLKPSDEDSPPPEASEPRTSRN*
soilL1_100706321	3300003267	Sugarcane Root And Bulk Soil	MDRKIAEQIVALVDAHIDQLISSLGPVEAQIPPDEFAAYKRAIARVINSYDLEVIGLIAREHPDLKPADEDSDLPAAEAQPPRFSRN*
Ga0063455_1008106302	3300004153	Soil	MDRKLAEQIVALVNAHVDQLISSLGPVEAEIPAEEFAGYKRAVARVISAYDAEIIDLVGREYPDLKPSDDDSELPEAAEPKTSRN*
Ga0063356_1003359742	3300004463	Arabidopsis Thaliana Rhizosphere	MERKLAEQIVALVNAHVDQLISSLEPVEAEISAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDEDSEPTEAAEPRTSRN*
Ga0063356_1046633021	3300004463	Arabidopsis Thaliana Rhizosphere	MERKLAEQIVALVNGHIDQLLSSLTPVQAQLSAEEFAAYKRGIARVIASYDSEIIDRVAREYPDLKPDDDDPDPPVAESVPPRSSRN*
Ga0062591_1025301121	3300004643	Soil	MERKLAEQIVALVNGHIDQLLSSLTPVQAQLSAEEFAAYKRGIARVIASYDSEIIDRVAREYPDLKPDDDDSDPPVAESAPPRSSRN*
Ga0062594_1012442741	3300005093	Soil	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPADEDASPPAEESVPPRPSRN*
Ga0065712_103874652	3300005290	Miscanthus Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEP
Ga0065715_110371151	3300005293	Miscanthus Rhizosphere	AEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPAEDDTGPAAPEQLPPRSSRN*
Ga0070670_1003614762	3300005331	Switchgrass Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVEAQVSPDEFAAYKRGVARVINTYDLEIIDRVAREYPDLKPADEDANPPAEESVPPRSSRN*
Ga0070660_1007692342	3300005339	Corn Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPADEDASPPAEESVPPRSSRN*
Ga0070689_1007182192	3300005340	Switchgrass Rhizosphere	MERKLAEQIVALVNGHIDQLLSSLTPVQAQLSAEEFAAYKRGIARVIASYDSEIIDRVAREYPDLKPDDDDPDP
Ga0070691_102194691	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLPPRSSRN*
Ga0070687_1004134941	3300005343	Switchgrass Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLP
Ga0070668_1018013861	3300005347	Switchgrass Rhizosphere	GTELMERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLPPRSSRN*
Ga0070675_1014252111	3300005354	Miscanthus Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDT
Ga0070667_1006789612	3300005367	Switchgrass Rhizosphere	MDRKLAEQIVALVNAHVDQLISSLQPVEEQMSPEEFALYKRAVARVINTYDVEIIDRVAREYPDLKPADDDADLPSADVTPPSSSRN*
Ga0070711_1009124462	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGTLMDRKLAEQIVALVDAHIDQLISSLEPVEANVAAGEFAEYKRGVARVIASYDAEIIDRVAREYPDLKPGDEDSGSPEASEPRTTRN*
Ga0070663_1002946142	3300005455	Corn Rhizosphere	MDRKLAEQIVALVNAHVDQLISSLAPVEAEISPEEFAAFKRGIARVINAYDVEIIDRVTREYPDLKPADDDPEPSAPETEPPRSSRN*
Ga0070685_103904562	3300005466	Switchgrass Rhizosphere	LAEQIVALVNAHVDQLISSLQPVEEQMSPEEFALYKRAVARVINTYDVEIIDRVAREYPDLKPADDDADLPSADVTPPSSSRN*
Ga0070665_1010396952	3300005548	Switchgrass Rhizosphere	MERKMAEQIVELVNAHIDQLISSLAPVEAGLSPEEFAAYKRGVAKVIGVYDAEIIDRVTREYPDLKPADDDADPAEKDPPKFSRN*
Ga0074470_107142222	3300005836	Sediment (Intertidal)	MERKMAEQIVALVNGCIDQLISSLAPVEAGTSDADFAAYKRGVARVIAAFDVEIVDRIAHEHPDLRPDEDDAEPSAPEAVPPRSSRN*
Ga0075428_1006865342	3300006844	Populus Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLEPVEAQIPPEEFAAYKRAVARVINSYDQEIIERIARKYPDLKPADEDSDPPTADPVPPRSSQN*
Ga0079215_104807372	3300006894	Agricultural Soil	MERKLAEQIVALVNAHVDQLISSLAPVEAEVSAEEFAGYKRGIARVISAYDAEIIERVAREYPDLKPSDDDPEPPGAEEPRKSRN*
Ga0079219_108894882	3300006954	Agricultural Soil	MDRKIAEQIVALVNAHIDQLISSLDPVAAQFSTEEFAAYKRGVARVISAYDAEIIERVAREFPDLKPADDDTEPAAPEQPPPRSSRN*
Ga0079218_102099592	3300007004	Agricultural Soil	MERKLAEQIVALVNAHVDQLISSLEPVAAEISAEEFAGYKRGVARVLSAYDAEIIDRVAREYPDLKPSDEDSPPPEASEPRTSRN*
Ga0079218_112707722	3300007004	Agricultural Soil	MERKLAEQIVALVNAHIDQLISSLEPVEAALSAEEFASYKRGIARVISTYDTEIIDRVAREYPDLKPSEEDPEPQAIAEPRISRN*
Ga0079218_113085971	3300007004	Agricultural Soil	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPDEFAGYKRGIARVINAYDAEIIERVAREHPDLRPTDDDSDPPAP
Ga0079218_113539932	3300007004	Agricultural Soil	MERKLAERIVALVNGHIDQLISSLAPVEAEISAEEFAGYKRGVARVINAYDAEIIERVAKDYPDLKPGDDDSNPADTAKPGPSHN*
Ga0105249_128730711	3300009553	Switchgrass Rhizosphere	MERKLAEQIVAFVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLPPRSSRN*
Ga0134127_129433682	3300010399	Terrestrial Soil	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTE
Ga0134122_113706902	3300010400	Terrestrial Soil	MDRKLAEQIVALVNAHVDQLISSLQPVEEQMSPEEFALYKRAVARVINTYDVEIIDRVAREYPDRKPADDDADLP
Ga0137437_12560201	3300011442	Soil	KLAEQIIALVNAHVDQLISSLEPIEAEISAEEFAGYKRGVARVISAYDVEIIDRVAREHPDLKPSDEDSGPSDTIEPRPSRN*
Ga0150985_1070673892	3300012212	Avena Fatua Rhizosphere	MDRKLAEQIVALVNSHVDQLISSLAPVEAEISPEEFAAFKRGIARVINAYDVEIIERVSREFPDLKPADDDPEPTPAESAPPRSTRN*
Ga0150984_1088263223	3300012469	Avena Fatua Rhizosphere	MDRKLAEQIVALVNSHVDQLISSLAPVEAEISPEEFATFKRGIARVINAYDVEIIERVTREFPDLKPADDDPEPTPAESAPPRSTRN*
Ga0157281_10113911	3300012883	Soil	MDRKLAEQIVALVNAHVDQLISSLQPVEEQMSPEEFALYKRAVARVINTYDVEILDRVAREYPDLKPADDDADLPSADVTPPSSSRN*
Ga0164241_100931112	3300012943	Soil	MERKLAGQIVALVNAHIDQLISSLEPVEREVSAKEFAAYKRGVARVISAYDTEIIERVAREYPDLKPSDDDEASEPEAPPTTRN*
Ga0164241_101452812	3300012943	Soil	MDRNLAEQIVALVNGCVDQLIATLDPVESSTTPEEFAAYKRGVARVINAFDLEIVDRLAREHPHLKPDEDDEPGDDTQGPHSTN*
Ga0164241_103145691	3300012943	Soil	MERKLAGQIVALVNAHIDQLIASLEPVEREVSAKEFAAYKRGVARVISAYDTEIIDRVAREYPDLRPSDDDEAAEPEVPPTTRN*
Ga0164241_104688882	3300012943	Soil	MERKLAEQIIALVNAHVDQLISSLNPVEAEMSAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDDDSEPPESAETPGARRN*
Ga0137410_101590892	3300012944	Vadose Zone Soil	MGTHLMERKLAEQIVALVNAHVDQLISSLKPVETEISAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDEDSETPEAAEPRKSQN*
Ga0157375_123755512	3300013308	Miscanthus Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVTREFPDLKPADDDTE
Ga0157380_103854432	3300014326	Switchgrass Rhizosphere	MERKLAEQIVALVNAHIDQLIASLEPVEAEISAEEFAGYKRGVVRVINAYDVEIIDRVAREYPDLKPSDEEPAATGAAEPQTSRN*
Ga0157377_108091592	3300014745	Miscanthus Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVEAQVSPDEFAAYKRGVARVINTYDLEIIDRVAREYPDLKPADEDASPPAEESVPPRSSRN*
Ga0173480_101484122	3300015200	Soil	MDRKLAEQIVALVNSHIDQLISSLEPVEGHMSPEEFAAYKRGVARVISAYDAEIINRIASEYPDLKPADDDADPPAVESVPPRSSRN*
Ga0132258_125079262	3300015371	Arabidopsis Rhizosphere	MDRKLAEQIVALVNSHIDQLISSLEPVEKHLSPEEFAAYKRGVARVIAAYDAEIVNRIALEYPDLKPAEDDGEADPPEAVPPRSSQN*
Ga0190266_109510562	3300017965	Soil	LERKIAEQIVALVNAHVDQLISSLGPVEAEISAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDEDSEPTEAAEPRTSRN
Ga0190265_103956302	3300018422	Soil	MDRKLAEQIVALVNAHVDQLISSLAPVEAEIPPEEFAGYKRGVARVIGAYDTEIIERVTREYPDLKPGEDDADASDMAEPRPSRN
Ga0190269_104598041	3300018465	Soil	MERKLAEQIVALVNSHVDQLISSLEPVAQAMTDEEFAGYKRGVARVISAYDNEIIDRVTREYPDLRPGDDDLEPATSAEPAGMRRN
Ga0190270_102386773	3300018469	Soil	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPEEFAVYKRGIARVITAYDVEIIDRIAREFPDLKPGDDDSDLPAPESMVTSKTRN
Ga0190270_121922272	3300018469	Soil	GPDLMERKLAEQIVALVNAHIDQLISSLEPVEAEMTADEFAGYKRGVARVISAYDVEIIDRVAREYPDLKPSDEDSGPSDTAEPHPSRN
Ga0190274_100052395	3300018476	Soil	MERKLAEQIVALVNAHIDQLISSLEPVEAEMSAEEFAGYKRGIARVISAYDTEIIDRVAREYPDLKPSDEDSGPSDTAEPHPSRN
Ga0190274_100119192	3300018476	Soil	MERKLAEQIVALVNAHIDQLISSLEPVEAEMSAEEFAGYKRGVARVINTYDVEIIDRVAREYPDLKPSDEDSGPSDTAEPHRSHN
Ga0190274_101546352	3300018476	Soil	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPDEFAGYKRGIARVINSYDVEIIERVAREYPDLKPSDDDADPTSPEPAGPRISRN
Ga0190274_107667442	3300018476	Soil	MDRKLAEQIVALVNSHIDQLISSLAPVEAEIPPEEFAGYKRGIARVITAYDVEIIDRVAREHPDLKPSDDDADPTSPEPAGPRISHN
Ga0190274_124638491	3300018476	Soil	MDRKLAEQIVALVNAHVDQLISSLDPVEAEISAEEFAGYKRGVARVISAYDAEIIDRVTREYPDLKPSDDDTEPPEATEPHASRN
Ga0190274_125075652	3300018476	Soil	MDRKLAEEIVALVNGCIDQLISSLPPVEEHASPEDFAAYKRGVARVITAFDTEIVDRIAREHPDLRPEEEESEPPEAETLPPHSSRN
Ga0190271_101147372	3300018481	Soil	MDRKLAEQIVALVNAHVDQLISSLEPVQAEISGEEFAAYKRGVARVISAYDAEIIDRVAREYPDLKPGDDDAVPSETPEPLPSRN
Ga0190271_101884562	3300018481	Soil	MDRKLAEQIVALVNAHIDQLISSLEPVEAEMTADEFAGYKRGVARVISAYDMEIIDRVTREYPDLKPSDEDSGPSDTAEPHPSRN
Ga0190271_104573252	3300018481	Soil	MERKLAEQIVALVNAHIDQLISSLEPVEAEMSADEFAGYKRGVARVISAYDVEIIDRVTREYPDLKPSDEDSGPSDTAEPHPSRN
Ga0173482_101210242	3300019361	Soil	MDRKLAEQIVALVNSHIDQLISSLEPVEGHMSPEEFAAYKRGVARVISAYDAEIIDRIASEYPDLKPADDDADPPAVESVPPRSSRN
Ga0190264_123578361	3300019377	Soil	LPHWGQSPFAKKVPDLMERKLAEQIVALVNSHIDQLISSLAPVEAEISPDEFAGYKRGIARVITAYDVEIIERVAREHPDLKPSDDDSDSTPAEPAAPRISRN
Ga0193752_10126992	3300020027	Soil	MAEQIVALVNGCIDQLISTLEPVEAAVSAEEFAGYKRGVAKVITAFDIELIDRVTQDHPDLRPVDDDAEHPGTAQTETPKPSRN
Ga0193752_10914402	3300020027	Soil	MAEQIVTFVNGCIDQLIATLPPVEAETSPEEFAGYKRGVARVINAFDVEIIERIAREYPDLKPADDESDPADTQSPPPQSSRN
Ga0210381_102797292	3300021078	Groundwater Sediment	MERKLAEEIVALVNGCIDQLISSLAPVEEHASPEEFAAYKRGVARVITAFDTEIVDRIAREHPDLRPEDDESEPPEAEILPPRSTRN
Ga0212091_100525122	3300022549	Groundwater	MERKTAEQIVALANSCIDQLLSSLGPVEQSVSPEEFAAYKRGVAKVLNAIDVEIIERVAHDFPDLKTDDDSDHSGEPESPKSSHN
Ga0247790_100238392	3300022915	Soil	MDRKIAEQIVALVNAHIDQLISSLGPVEAQVSPDEFAAYKRGVARVINTYDLEIIDRVAREYPDLKPADEDANPPAEESVPPRSSRN
Ga0247777_10242602	3300022917	Plant Litter	MDRKLAEQIVALVNAHVDQLISSLQPVEEQMSPEEFALYKRAVARVINTYDVEIIDRVAREYPDLKPADDDADLPSADVTPPSSSRN
Ga0247777_10532041	3300022917	Plant Litter	HLMERKLAEEIVALVNGCIDQLISSLAPVEQHASPEDFAAYKRGVARVITACDTEIIQRVARDHPDLLPADEEADPPIEEPDIPKSQRN
Ga0247755_10521762	3300023070	Plant Litter	MDRKLAEQIVALANGCIDQLIVSLDPVERVASAEEFAAYKRGVAKVISAFDQEIIERIAREYPDLNPDDDADSVAAEAAPD
Ga0247758_10132972	3300023079	Plant Litter	MDRKLAEQIVALANGCIDQLIVSLDPVERVASAEEFAAYKRGVAKVISAFDQEIIERIAREYPDLNPDDDADSVAAEAPDPAKISRN
Ga0247762_10127263	3300023169	Plant Litter	MERKLAEEIVALVNGCIDQLISSLAPVEQHASPEDFAAYKRGVARVITACDTEIIQRVARDHPDLLPADEDADPPVEEPDIPKSQRN
Ga0247760_11139001	3300023272	Plant Litter	MERKLAEEIVALVNGCIDQLISSLAPVEQHASPEDFAAYKRGVARVITACDTEIIQRVARDHPDLLPADED
Ga0247776_102283931	3300023275	Plant Litter	MERKLAEEIVALVNGCIDQLISSLAPVEQHASPEDFAAYKRGVARVITACDTEIIQRVARDHPDLLPADEDADPPVEEPDIPK
Ga0207662_101551122	3300025918	Switchgrass Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLPPRSSRN
Ga0207657_101972653	3300025919	Corn Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPADEDASPPAEESVPPRSSRN
Ga0207659_111441151	3300025926	Miscanthus Rhizosphere	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPERLPP
Ga0207700_114721011	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MGTLMDRKLAEQIVALVDAHIDQLISSLEPVEANVAAGEFAEYKRGVARVIASYDAEIIDRVAREYPDLKPGDEDSGSPEA
Ga0207701_114391612	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPAD
Ga0207644_101265692	3300025931	Switchgrass Rhizosphere	MDRKLAEQIVALVNAHVDQLISSLAPVEAEISPEEFAAFKRGIARVINAYDVEIIDRVTREYPDLKPADDDPEPSAPETEPPRSSRN
Ga0207690_117853881	3300025932	Corn Rhizosphere	MDRKLAEQIVALVNAHVDQLISSLAPVEAEISPEEFAAFKRGIARVINAYDVEIIDRVTREYPDLKPAD
Ga0207706_102761141	3300025933	Corn Rhizosphere	LAEQFVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLPPRSSRN
Ga0207670_101786841	3300025936	Switchgrass Rhizosphere	LMERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAAPEQLPPRSSRN
Ga0207670_114300952	3300025936	Switchgrass Rhizosphere	MERKLAEQIVALVNGHIDQLLSSLTPVQAQLSAEEFAAYKRGIARVIASYDSEIIDRVAREYPDLKPDDDDPDPPVA
Ga0207689_109419881	3300025942	Miscanthus Rhizosphere	MERKMAEQIVALVNGCIDQLISTLGPVEAAVSEEEFAGYKRGIAKVITAFDIELIDRVTRDHPDLRPADEDP
Ga0207689_116572242	3300025942	Miscanthus Rhizosphere	TMERKMAEQIVALVNGCIDQLISTLGPVEAAVSEEEFAGYKRGIAKVITAFDIELIDRVTRDHPDLRPADEDPENPEESESEVPKSSRN
Ga0207679_104688151	3300025945	Corn Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPADEDANPPAEESVP
Ga0207677_114472642	3300026023	Miscanthus Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPADE
Ga0207678_113545491	3300026067	Corn Rhizosphere	MERKLAEQIVELVNAHVDQLISSLEPIEAEMTAEEFAGYKRGVARVIGAYDTEIIDRVTREFPDLKPTEDDAEPSDSAVPHPSRN
Ga0207678_117240942	3300026067	Corn Rhizosphere	MDRKIAEQIVALVNAHIDQLISSLGPVETQVSPDEFAAYKRGIARVINTYDLEIIDRVAREYPDLKPADEDASPPAEESVPPRPSRN
Ga0209486_109069771	3300027886	Agricultural Soil	MVNAHVDQLISSLEPVEAQISAEEFAGYKRGVARVLSAYDAEIIDRVAREYPDLKPSDEDSPPPEASEPRTSRN
Ga0209486_109262722	3300027886	Agricultural Soil	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPEEFAGYKRGIARVITAYDVEIIERVAREHPDLKPSDDDSESTPAEPAAPRISRN
Ga0209486_109984601	3300027886	Agricultural Soil	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPDEFAGYKRGIARVINAYDAEIIERVAREHPDLRPTD
Ga0209486_110478331	3300027886	Agricultural Soil	MERKLAERIVALVNGHIDQLISSLAPVEAEISAEEFAGYKRGVARVINAYDAEIIERVAKDYPDLKPGDDDSNPADTAKPGPSHN
Ga0268266_109375362	3300028379	Switchgrass Rhizosphere	MERKMAEQIVELVNAHIDQLISSLAPVEAGLSPEEFAAYKRGVAKVIGVYDAEIIDRVTREYPDLKPADDDADPAEKDPPKFSRN
Ga0247822_104821421	3300028592	Soil	MERKLAEQIVALVNAHIDQLIASLEPVEAEISAEEFAGYKRGIARVIGAYDTEIIERVTREFPDLRPSDEDPGPQEGAEPPRARRN
Ga0307499_102668342	3300031184	Soil	MDRKLAEQIVALVNAHVDQLISSLEPVEAEISAEEFAGYKRGIARVISAYDTEIIDRVAREYPDLKPSDEDSEPTEAAEPRTSRN
Ga0307513_100417049	3300031456	Ectomycorrhiza	MERKMAEQIVALVNGCIDQLISTLGPVEAAVSDEEFAGYKRGVAKVITAFDIELIERVTRDHPDLRPADDDAENPAQSDPDVPKSSRN
Ga0307408_1000514132	3300031548	Rhizosphere	MERKMAEQIVAFVNGCVDQLIATLPAVEAGVPPAEFADYKRGVARVIKAFDTEILERISREHPDLVPDEDESEPAMEPNPPPGSPN
Ga0307408_1003836492	3300031548	Rhizosphere	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPEEFAGYKRGIARVITAYDVEIIERVAREHPDLKPSDDDSESTPAEPSAPRISRN
Ga0307408_1016424332	3300031548	Rhizosphere	QIVELVNAHVDQLISSLDPVEAAISAEEFAGYKRAVARVINAYDTEIIDRVTREYPDLKPGDDDSEPPEPAEPRTSRN
Ga0310886_102188001	3300031562	Soil	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADD
Ga0307405_102034312	3300031731	Rhizosphere	MGSDPICQQKVPDPMERKLAEQIVALVNSHIDQLISSLAPVEAEISPEEFAGYKRGIARVITAYDVEIIERVAREHPDLKPSDDDSESTPAEPSAPRISRN
Ga0307468_1010609332	3300031740	Hardwood Forest Soil	MERKLAEQIVALVNAHVDQLISSLEPVEAEMSPEEFAGYKRGVVRVISAYDAEIIDRVAREYPDLKPSDDDAEPPETAEPRTSRN
Ga0307413_103303472	3300031824	Rhizosphere	MERKLAEQIVALVNAHIDQLIASLEPVEAGMSNEEFAGYKRGVARVISAYDAEIIDRVTREHPDLKPGDEDSEPSPSAEPRTTRN
Ga0307413_107553492	3300031824	Rhizosphere	MERKLAEQIVALVNTHIDQLISSLEPVKAGMSAEEFAGYKRGVARVISAYDAEIIDRVTREFPDLKPGDDDSDPPEAAEPRISRN
Ga0310893_100622241	3300031892	Soil	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVAREFPDLKPADDDTEPAALEQLPPRSSRN
Ga0307407_112985411	3300031903	Rhizosphere	VSLINSQIDQLISTLEPVEAAVSAEEFAGYKRGIARVITAFDAEVIERVTREHPDLRPDDDDTDTPGDDPAGPRRSHN
Ga0310900_100858752	3300031908	Soil	MERKLAEQIVALVNAHIDQLISSLGPVEAELSPEEFAAYKRGVAKVIGAYDAEIIERVTREFPDLKPADDDTEPAAPEQLPPRSSRN
Ga0308175_1024008042	3300031938	Soil	HVDQLIASLEPVRKEVSAAEFAEYKRGVARVISAYDAEIIDRVAREYPDLKPADDDVEPPEGSEPGTRRN
Ga0308176_121181001	3300031996	Soil	HIDQLISSLEPVEANVSAGEFAEYKRGVARVIASYDAEIIDRVAREHPDLKPGDEDSGSPEAPEPRTTRN
Ga0307411_101202522	3300032005	Rhizosphere	MERKLAEQIVALVNAHIDQLIASLEPVEAGMSNEEFAGYKRGVARVISAYDAEIIDRVTREHPDLKPGDEDSEPSPSAE
Ga0310906_108719842	3300032013	Soil	MERKLAEQIVALVNSHIDQLISSLAPVEAEISPDEFAGYKRGVARVITAYDLEIIDRVAREFPDLKPSDDDSDPASADPTGPRISRN
Ga0310890_102055452	3300032075	Soil	MERKLAEQIVALVNAHVDQLISSLEPVQAEISAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDEDSPPPEASEPRSSRN
Ga0307415_1020156672	3300032126	Rhizosphere	MERKLAEQIVALVNAHIDQLISSLAPVEAELSPEEFAGYKRGVARVISAYDTEIMERVTRDFPDLKPEDDDPGPAGQADPRHSRN
Ga0315910_100356724	3300032144	Soil	MDRKLAEQIVALVNAHIDQLISSLEPVEAQISAEEFAAYKRGVARVINAYDVEIVDRIAREYPDLRPADEDAELPAAESIPPQSSRN
Ga0315910_100582432	3300032144	Soil	MDRKLAEQIVALVNAHIDQLISSLQPVEAHLSPEEFAAYKRGVARVISAYDAEIIDRVAREYPDLKPADEDSDPVTPDPVPPRSSRN
Ga0315910_100774282	3300032144	Soil	MDRKLAERIVALVDAHIDQLISSLEPVEAQISAEEFAAYKRGVARVINAYDLEIVDRIAREHPDLRPADEDAELPAAESVPPRSSRN
Ga0315910_101447212	3300032144	Soil	MERKLAEQIVALVNAHIDQLISSLEPVKAGMSAEEFAGYKRGIARVISAYDAEILDRVTREYPDLKPSDDDDAPATVEPRITRN
Ga0315910_101571622	3300032144	Soil	MERKLAEQIVALVNAHVDQLISSLEPVEAEISAEEFAGYKRGVARVISAYDAEIIDRVAREYPDLKPSDEDSEPTEAAEPRTSRN
Ga0315910_105473492	3300032144	Soil	MERKLAEQIVALVNAHVDQLISTLEPVEGEISAEEFAGYKRGVARVIAAYDTEIIDRVAREYPDLKPSDEDAGPPETAEPRTSRN
Ga0315910_113051661	3300032144	Soil	RKLAEQIVALVNSHIDQLISSLEPVKAGMSAEEFAGYKRGIARVISAYDAEIIDRVTLEYPDLKPGDDEDAPAAAEPRITRN
Ga0315910_115799192	3300032144	Soil	MERKLAEQIVALVNAHIDQLIASLEPVEAEISAEEFAGYKRGIARVIGAYDTEIIERVTREFPDLRPSDEDPGPQEGAEPRGARHN
Ga0315912_100017426	3300032157	Soil	MERKLAEQIVALVNAHVDQLISSLEPVKAAISAEEFASYKRGVARVISAYDAEIIDRVAREFPDLKPGDDDEEAPAAAEPRTTRN
Ga0315912_100040386	3300032157	Soil	MDRKLAEQIVALVNAHIDQLISSLGPVEAEISAEEFAAYKRGVARVISAYDAEIIDRVAREFPDLKPSDEDSEPPEAAKPRTSHN
Ga0315912_1000592914	3300032157	Soil	MDRKLAEQIAALVNAHIDQLISSLEPVEAQVTPEEFAAYKRGVARVINNYDVGIIELLAREYPDLAPAEDDADPAAGSVPPRSSQN
Ga0315912_102049981	3300032157	Soil	MDRKLAEQIVALVNAHVDQLISSLEPVEAGMTAEEFAGYKRGVARLISAYDAEIIDRVTQEFPDLKPSDEDSDTPEPAETRATRN
Ga0315912_107103171	3300032157	Soil	MDRKLAEQIVALVNSHIDQLISSLEPVKAGMSAEEFAGYKRGIARVISAYDAEIIDRVTLEYPDLKPGDDEDAPAAAEPRITRN
Ga0315912_114150511	3300032157	Soil	MERKLAEQIVALVNAHIDQLISSLEPVKAGMSAEEFAGYKRGIARVISAYDAEIIDRVTSEFPDLKPSDDEDAPATAEPRITRN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F063447

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences