Metagenome / Metatranscriptome Family F063498

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063498
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	94 residues
Representative Sequence	SPRMLHRFAADALNDSKPDTALKFVDRALSLMSTQKVTDFTLYQNLVELRVQILLVLGRNSEALASLEEAREQLPNNPTIAKWIERLRK
Number of Associated Samples	108
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.55 %
% of genes near scaffold ends (potentially truncated)	98.45 %
% of genes from short scaffolds (< 2000 bps)	96.90 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.86

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.225 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.729 % of family members)
Environment Ontology (ENVO)	Unclassified (32.558 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.961 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.54% β-sheet: 0.00% Coil/Unstructured: 38.46%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.86
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.86
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.118.7.1: 14-3-3 protein	d3mhra1	3mhr	0.86
a.118.7.1: 14-3-3 protein	d3efza1	3efz	0.85
a.118.8.1: TPR-like	d1w3ba_	1w3b	0.83
a.118.8.1: TPR-like	d1elwa_	1elw	0.82
a.118.8.1: TPR-like	d1wm5a2	1wm5	0.82

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF13519	VWA_2	8.53
PF11236	DUF3037	0.78
PF01061	ABC2_membrane	0.78
PF07927	HicA_toxin	0.78
PF01433	Peptidase_M1	0.78
PF13428	TPR_14	0.78
PF00082	Peptidase_S8	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.78
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	82.17 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	3.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	82.17 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	3.10 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	82.17 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3.10 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	82.17 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	2.33 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	82.17 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	2.33 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	82.17 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	2.33 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	82.17 %
Rhodonellum	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Rhodonellum	0.78 %
uncultured Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	82.17 %
Rhodonellum psychrophilum	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Rhodonellum → Rhodonellum psychrophilum	0.78 %
uncultured Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_106243663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300002896\|JGI24802J43972_1003407	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300002907\|JGI25613J43889_10154415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300004081\|Ga0063454_100000512	All Organisms → cellular organisms → Bacteria	5461	Open in IMG/M
3300004479\|Ga0062595_101602104	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300004479\|Ga0062595_102519519	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005171\|Ga0066677_10674215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300005177\|Ga0066690_10451462	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005179\|Ga0066684_10468136	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300005186\|Ga0066676_10831121	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300005293\|Ga0065715_10489885	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	789	Open in IMG/M
3300005340\|Ga0070689_101978539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300005343\|Ga0070687_101430030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300005345\|Ga0070692_11157755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300005406\|Ga0070703_10321552	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005445\|Ga0070708_100838489	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005468\|Ga0070707_102347647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300005471\|Ga0070698_100289699	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300005471\|Ga0070698_100484112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1174	Open in IMG/M
3300005536\|Ga0070697_100741931	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300005536\|Ga0070697_100986603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	748	Open in IMG/M
3300005559\|Ga0066700_11050293	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300005561\|Ga0066699_10918861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300005561\|Ga0066699_11269413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300005575\|Ga0066702_10404314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300005577\|Ga0068857_100125084	All Organisms → cellular organisms → Bacteria	2317	Open in IMG/M
3300005598\|Ga0066706_11272058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300005618\|Ga0068864_100793428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300005840\|Ga0068870_10310134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300005840\|Ga0068870_11335114	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae → Rhodonellum → Rhodonellum psychrophilum	523	Open in IMG/M
3300005897\|Ga0075281_1055878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300005903\|Ga0075279_10077533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300006028\|Ga0070717_10546224	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300006028\|Ga0070717_11350379	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	648	Open in IMG/M
3300006046\|Ga0066652_100656565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	995	Open in IMG/M
3300006800\|Ga0066660_11380969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300006806\|Ga0079220_12065257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300006844\|Ga0075428_100956987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300006871\|Ga0075434_100949976	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	874	Open in IMG/M
3300006876\|Ga0079217_11208184	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300006894\|Ga0079215_10287133	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300006903\|Ga0075426_10993604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300009038\|Ga0099829_10111799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2139	Open in IMG/M
3300009038\|Ga0099829_10403083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300009088\|Ga0099830_11154739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300009089\|Ga0099828_11489231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300009137\|Ga0066709_102678112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300009137\|Ga0066709_103797217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300009162\|Ga0075423_11807054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300009176\|Ga0105242_11872418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300009176\|Ga0105242_13196815	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300009177\|Ga0105248_11547101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300009177\|Ga0105248_12115249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300009651\|Ga0105859_1283895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300010045\|Ga0126311_11656024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300010303\|Ga0134082_10561895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300010335\|Ga0134063_10420152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300010337\|Ga0134062_10292536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300010401\|Ga0134121_12351709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300011119\|Ga0105246_10413761	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1123	Open in IMG/M
3300012189\|Ga0137388_12039881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300012203\|Ga0137399_11611468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300012204\|Ga0137374_10653260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300012204\|Ga0137374_10792089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300012207\|Ga0137381_10731580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300012208\|Ga0137376_10189400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1778	Open in IMG/M
3300012208\|Ga0137376_10221152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1640	Open in IMG/M
3300012350\|Ga0137372_10891782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300012358\|Ga0137368_10576321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300012359\|Ga0137385_11446402	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300012361\|Ga0137360_10771103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300012530\|Ga0136635_10331514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300012532\|Ga0137373_10098125	All Organisms → cellular organisms → Bacteria	2569	Open in IMG/M
3300012913\|Ga0157298_10247526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300012918\|Ga0137396_11131509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012929\|Ga0137404_11818276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300012944\|Ga0137410_11252727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300012975\|Ga0134110_10246829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300013306\|Ga0163162_13124753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300013306\|Ga0163162_13130349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300013503\|Ga0120127_10125058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300013772\|Ga0120158_10362069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300018089\|Ga0187774_11470776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300018422\|Ga0190265_12424956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300018431\|Ga0066655_10901397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	605	Open in IMG/M
3300018431\|Ga0066655_11056548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300018431\|Ga0066655_11157778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300018466\|Ga0190268_11163809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300018466\|Ga0190268_12351069	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300018468\|Ga0066662_12948476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300018468\|Ga0066662_12950298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300018482\|Ga0066669_11521030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300018482\|Ga0066669_11773808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300020010\|Ga0193749_1063089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300020181\|Ga0196958_10053978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1249	Open in IMG/M
3300021339\|Ga0193706_1022160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1962	Open in IMG/M
3300021362\|Ga0213882_10514997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300021363\|Ga0193699_10197298	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	835	Open in IMG/M
3300021953\|Ga0213880_10153668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300022756\|Ga0222622_10749210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300022892\|Ga0247753_1036465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300023268\|Ga0247765_1148392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300025907\|Ga0207645_10901139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300025918\|Ga0207662_10417934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300025922\|Ga0207646_10553038	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1035	Open in IMG/M
3300025922\|Ga0207646_10646557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	947	Open in IMG/M
3300025927\|Ga0207687_10637558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	901	Open in IMG/M
3300025930\|Ga0207701_10191432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1801	Open in IMG/M
3300025989\|Ga0207998_1023960	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300026088\|Ga0207641_11791288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300026320\|Ga0209131_1283813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300026542\|Ga0209805_1203072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300026542\|Ga0209805_1377731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300027605\|Ga0209329_1145308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300027843\|Ga0209798_10069341	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → environmental samples → uncultured Gemmatimonadaceae bacterium	1819	Open in IMG/M
3300028146\|Ga0247682_1041786	Not Available	822	Open in IMG/M
3300028381\|Ga0268264_11829945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300028744\|Ga0307318_10084197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1068	Open in IMG/M
3300029636\|Ga0222749_10455334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	686	Open in IMG/M
3300031740\|Ga0307468_100616203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	890	Open in IMG/M
3300031740\|Ga0307468_102014427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300031824\|Ga0307413_11599409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300031944\|Ga0310884_10509910	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300032205\|Ga0307472_101651945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300033004\|Ga0335084_10852817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300033814\|Ga0364930_0173582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300034132\|Ga0334915_012641	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300034134\|Ga0334928_114494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300034146\|Ga0334964_025024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.72%
Host-Associated	Host-Associated	16.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.40%
Plants	Host-Associated → Plants	16.28%
Aquatic	Environmental → Aquatic	2.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.98%
Freshwater	Environmental → Aquatic → Freshwater	1.55%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	1.55%
Sediment	Environmental → Aquatic → Sediment	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.78%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.36%
Loam	Environmental → Terrestrial → Soil → Loam	13.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.53%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.65%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	1.55%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	1.55%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.78%
Ice	Environmental → Aquatic → Freshwater → Ice	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Sand	Environmental → Terrestrial → Soil → Sand	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.36%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	19.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.53%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.20%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.65%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.88%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.55%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	1.55%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	1.55%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.78%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.08%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.30%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.53%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.20%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.10%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.33%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.33%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.33%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.55%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	1.55%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.55%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.78%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.78%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002896	Soil microbial communities from Manhattan, Kansas, USA - Sample 300um Nextera	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005897	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_103	Environmental	Open in IMG/M
3300005903	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_303	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009651	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-063	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012530	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025989	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_303 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034132	Biocrust microbial communities from Mojave Desert, California, United States - 11HMC	Environmental	Open in IMG/M
3300034134	Biocrust microbial communities from Mojave Desert, California, United States - 24HNC	Environmental	Open in IMG/M
3300034146	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 60SNS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1062436631	3300000956	Soil	PRMLHRFAADALNDSKPEVALKFVSRALSLMVGQDITDFTLYQSLVELRVQILLVLGRDDDALASAEEAKEKLPNNPAIARWIEKLQKNRPRGEA*
JGI24802J43972_10034071	3300002896	Soil	AKSFLGDSPRMLHRFAADALNDSKPEVXXKFVSRALSLMSAQNMTDFTLYQSLVELRVQILLVLGRDDDALASAEEAREKLPNNPTVAKWIERLKKNRPRGEA*
JGI25613J43889_101544151	3300002907	Grasslands Soil	RMLHRFAADALNDSKPEVALKFVNRALSLMGNQKVTDFTLYQALVELRVQVLLVLGREIDALSSLEEAREQMPNNPTIAKWIEKLTRVK*
Ga0063454_1000005121	3300004081	Soil	ETIVREALEQFVDAKSFLGDSPRMLHRFAADALNESKPEVALKFANRALSLLGHQQITDFALFQAIVELRVQIFLILGRENDALASLEEAREVLPNNPSIAKWIEKLMRTRPRGEA*
Ga0062595_1016021042	3300004479	Soil	LGDSPRMLHRFAADALNDSKPEVALKFVDRATSLLELQTLTDFTLYQSLVELRVQILLVLGREADALLSLEAAREKLPNNPTIARWIERLNKQRPRGEA*
Ga0062595_1025195191	3300004479	Soil	DAKSFLGDSPRMLHRFAADALNDSKPDTALKFVDRALSLLTAQQMTDFALYQALIELRVQVLLVLDRTRDAVATLEEAKEQLPNNPTIARWLEKLTKT*
Ga0066677_106742151	3300005171	Soil	FLGDSPRMLHRFAADALNDSKPETALKFVDRALSLMVNQKLTDFNLFQNLIELRVQILLVLGRAADALAALEEAQQTLPNNPSIAKWIERLQKQRTS*
Ga0066690_104514621	3300005177	Soil	GDSPRMLHRFAADALNDSKPETALKFVDRALLLMSNQKITDFSLYQNFIELRVQILLVLGREEEALSSLEEAKELLPNSPTIARWIDRLNKQRPVPG*
Ga0066684_104681362	3300005179	Soil	RFAADALNDSKPEVALKFVNRGLSLLPTQDATDFHLYQNLIELRVQILLVLDRTAEALTALEEAREMLPNNPTIAKWIARLTKK*
Ga0066676_108311211	3300005186	Soil	FLGDSPRMLHRFAADALNDSKPETALKFADRALSLMSSQKVTDFSLYQNLIELRVQTLLVLGRDSEALGSLEEAKELLPNNPTIARWIDKLKKQRA*
Ga0065715_104898852	3300005293	Miscanthus Rhizosphere	EALLHFVDAKSFLGDSPRMLHRFAADALNDSKPEVALKFVSRGLSLLANQSTTDFTLYQALTELRVQILLILGREDDALVTLEEAREKLPNNPSIAKWIAKLEKKKIEN*
Ga0070689_1019785392	3300005340	Switchgrass Rhizosphere	AKSFLGDSPRMLHRFAADALNDSKPEVALKFVTRAASLLSQQTITDFALYQALMELRVQVLLVMGREDDALASLEEAREKLPNNPTIAKWIEKLRKNKPRGEA*
Ga0070687_1014300301	3300005343	Switchgrass Rhizosphere	ALKFVSRGLSLLATQDMTDFALYQALVELRVQILLVLGRDDDALASLEEAREKLPNNPTVAKWIEKLKKNKPRGEA*
Ga0070692_111577552	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	EALEQFVDAKSFLGDSPRMLHRFAADALNESKPEVALKFANRALSLLANQTITDFALYQAIIELRVQIFLILGRDADALKSLEDAREVLPNNPSIAKWIEKLMRTRPRGEA*
Ga0070703_103215521	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	QFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFVDRSLSLMSNQKVTDFALYQNLIELRVQILLVLGRDAEALGSLEEAKELLPNNPTIARWIEKLKKQRA*
Ga0070708_1008384892	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLHRFAADALNDSKPETALKFVDRSLSLMSNQKVTDFALYQNLIELRVQILLVLGRDAEALGSLEEAKELLPNNPTIARWIEKLKKQRA*
Ga0070707_1023476472	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LREALLQFVDAKSFLGDSPRMAHRFAADALNDSKPETALKFIDRALSLMSTQKVTDFTLYQSLIELRVQVLMVMGREAEALASLEEAKELMPNNPSITKWIEKLKKVNR*
Ga0070698_1002896992	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GDSPRMLHRFAADALNDSKPETALKFVDRALLLMSNQKITDFALFQSLIELRVQILLVLGREDEALRSLEEAKEILPNSPTISRWIERLNKPRSQ*
Ga0070698_1004841122	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	ADALNDSKPETALKFVDRALSLMSNQKVTDFTLYQSLIELRVQILLVLDRGEEALNSLEEAKELMPNNPSIAKWIDRLKKPRSQ*
Ga0070697_1007419311	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VVREALLQFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFVDRALSLMSNQKVTDFTLYQSLIELRVQILLVLDRGEEALNSLEEAKELMPNNPSIAKWIDRLKKPRSQ*
Ga0070697_1009866032	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KPETALKFVDRALSLMVNQKLTDFNLFQNLIELRVQILLVLGREADALAALEEAQQTLPNNPSIAKWIERLQKQRTS*
Ga0066700_110502931	3300005559	Soil	ALNESKPEVALKFVHRALSLMANQRVTDFTLYQSLVELRVQILLVLGREPDAMAALEEAREMLPNNPAIAKWIERLNRGRA*
Ga0066699_109188612	3300005561	Soil	TVLREALSQFVDAKSFLGDSPRMLHRFAADALNDSKPDTALKFVDRALSLLSTQKVTDFTLYQNLVELRVQILLVLGRNSDALASLEEAREQLPNNPNIAKWIERLRK*
Ga0066699_112694131	3300005561	Soil	ALLQFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFVDRALLLMSNQKITDFALFQNLIELRVQILLVFGREEEALRSLGEAKEVLPNNPTIARWIDRLNKPRSQ*
Ga0066702_104043141	3300005575	Soil	NDSKPEVALKFVNRGLSLLPAQDATDFHLYQNLVELRVQILLVLDRTAEALAGLEEARERLPNNPTIAKWISRLNKKSEG*
Ga0068857_1001250841	3300005577	Corn Rhizosphere	PRMLHRFAADALNDSKSETALKFVDRALSLMSTQKVTDFTLYQNLVELRVQILLVLGRNADALSALEEAREHLPNNPSIAKWIERLRK*
Ga0066706_112720582	3300005598	Soil	DSPRMLHRFAADALNDSKPETALKFVDRALSLMVNQKLTDFNLFQNLIELRVQILLVLGRAADALAALEEAQQTLPNNPSIAKWIERLQKQRTS*
Ga0068864_1007934282	3300005618	Switchgrass Rhizosphere	PEVALKFSDRALSLLSMQTLTDFSLYQAIVELRVQILLVLGRESDALTALEEAREKLPNNPTIAKWIERLNKVKPKGEA*
Ga0068870_103101341	3300005840	Miscanthus Rhizosphere	GDSPRMLHRFAADALNESKPEVALKFANRALSLLANQQITDFTLYQAIIELRVQVFLVLGREADALASLEEAREVLPNNPSIAKWIEKLKRTRPRGEA*
Ga0068870_113351141	3300005840	Miscanthus Rhizosphere	VREALSHFVDAKSFLGDSPRMLHRFAADALNDSKPEVALKFVNRGLSLLPTQDATDFHLYQNLVELRVQILLVLDRTAEALASLEEARETLPNNPTIAKWIARLKRVKGETLSS*
Ga0075281_10558781	3300005897	Rice Paddy Soil	ETVLREALLQFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFVDRALLLMSNQKVTDFTLYQNLIELRVQVLLVLGRQNDAISSLEEAREVLPNNPSIARWMERLKKS*
Ga0075279_100775331	3300005903	Rice Paddy Soil	LNDSKPETALKFVDRALLLMSNQKVTDFTLYQNLIELRVQVLLVLGRQNDAISSLEEAREVLPNNPSIARWMERLKKS*
Ga0070717_105462241	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DSKPEVALKFVDRALSLLSRQKVTDFALYQSLIELRVQILLILGRDQDAIAVLEEAREMLPNNPGIARWLEKLKR*
Ga0070717_113503793	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ALKFVNRALSLMTGQQVTDFALYQALVELRVQILLILDRQTDALATLEEAKEALPNNPTIAKWIEKLKKQGS*
Ga0066652_1006565651	3300006046	Soil	DSPRMLHRFAADALNESKPEVALKFANRALSLLNNQHVTDFALYQAVIELRVQVFLVLGRENDALASLEEAREILPNNPSIAKWIEKLMRTRPRGEA*
Ga0066660_113809691	3300006800	Soil	MLHRFAADALNDSKPETALKFIHRALSLMANQKVTDFTLYQALIELRVQILLVLGREEEALSSLEEARDLMPNNPTIARWIERLNKQRSPA*
Ga0079220_120652572	3300006806	Agricultural Soil	HRFAADALNDSKPDTALKFVDRALSLLSTQKVTDFTLYQNLVELRVRILLVLGRNSDALASLEEAREQLPNNPTIAKWIERLRK*
Ga0075428_1009569872	3300006844	Populus Rhizosphere	HRFAADALNDSKPEVALKFVSRGLSLLANQSTTDFTLYQALTELRVQILLILGREGDALVTLEEAREKLPNNPSIAKWIAKLTKGN*
Ga0075434_1009499762	3300006871	Populus Rhizosphere	VREALHQFVDAKSFLGDSPRMLHRFAADALNDSKPEVALKFVTRAVSLLSQQKVTDFALYQALVELRVQILLVMGRDDDALASLEEAREQMPNNPTIAKWIEKLGKNKPHGEA*
Ga0079217_112081842	3300006876	Agricultural Soil	LHRFGADAMNDSKPETALRFVNRALSLLSGSEITDFTLYQALVELRVQVLLILGRETEAITALEEARERLPNNPTIAKWLEKLKKTEV*
Ga0079215_102871331	3300006894	Agricultural Soil	RLLHRFGADAMNDSKPETALRFVNRALSLLSGSEITDFTLYQALVELRVQVLLILGRETEAITALEEARERLPNNPTIAKWLEKLKKTEV*
Ga0075426_109936042	3300006903	Populus Rhizosphere	DLETVLREAVSQFVDAKSFLGDSPRMLQRFAADALNDSKPETALKFVDRALLLMSSQKVTDFALYQQFVELRVQILLVLGRENDAMVALEEAKELLPNNPTIARWMDKLKKAKA*
Ga0099829_101117991	3300009038	Vadose Zone Soil	TVVREALLQFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFVDRALSLMSNQKVTDFTLYQSLIELRVQILLVEDRGEEALNSLEEAKELMPNNPSIAKWIDRLKKQRSQ*
Ga0099829_104030831	3300009038	Vadose Zone Soil	KSFLGDSPRMLHRFAADALNDSKPETALKFVDRALSLMVNQKLTDFNLFQNLIELRVQILLVLGREADALAALEEAQQTLPNNPSIAKWIERLQKQRSS*
Ga0099830_111547391	3300009088	Vadose Zone Soil	DSPRMLHRFAADALNDSKPETALKFLNRALSLMAGSQVTDFTLYQLLVELRVQVLLVLDRQAEAVATLEEAKEALPNNPSIAKWLEKLKKP*
Ga0099828_114892312	3300009089	Vadose Zone Soil	ALLQFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFVDRALSLMVNQKLTDFNLFQNLIELRVQILLVLGREADALAALEEAQQTLPNNPSIARWIERLQKQRTS*
Ga0066709_1026781121	3300009137	Grasslands Soil	DAKSFLGDSPRMLHRFAADALNDSKPEVALKFVNRGLSLLPTQDATDFHLYQNLVELRVQILLVLDRTAEALTSLEEARELLPNNPTIAKWISRLRKK*
Ga0066709_1037972172	3300009137	Grasslands Soil	SQFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFIDRALSLMSTQKVTDFSLYQSLIELRVQVLMVMGREPEALASLEEAKELMPNNPSITKWIEKLKRQKVNG*
Ga0075423_118070541	3300009162	Populus Rhizosphere	LNQFVDAKSFLGDSPRMLHRFAADALNDSKPDTALKFVDRALSLMSTQKVTDFTLYQNLVELRVQILLVLGRNSEALISLEEAREQLPNNPTIAKWIERLRK*
Ga0105242_118724182	3300009176	Miscanthus Rhizosphere	RALSLLANQHITDFALYQAIVELRVQIFLILGREDDALASLEEAREVLPNNPSIAKWIEKLKRTKPRGQA*
Ga0105242_131968151	3300009176	Miscanthus Rhizosphere	VALKFVDRATSLLDLAPLTDFTLFQSLIELRVQILLVLGREAEALRSLEEAREKLPNNPTIARWIERLNKVKPRGEA*
Ga0105248_115471012	3300009177	Switchgrass Rhizosphere	REAISHFVDAKSFLGDSPRMLHRFAADALNDSKPEVALKFVNRGMSLLPTQEMTDFHLYQSLVELRVQILLVLDRTAEALAGLEEARELLPNNPTIAKWIARLKKK*
Ga0105248_121152491	3300009177	Switchgrass Rhizosphere	ADALNDSKPEVALKFVHRALSLMANQRVTDFTLYQSLVELRVQILLVLEREPEAMAALLEARDLLPNNPAIARWIERLTKNGVLSPGS*
Ga0105859_12838952	3300009651	Permafrost Soil	MLLRFAADALNDSKPETSLKFVDRALSLLTAQQMTDFALYQALIELRVQVLLVLDRKRDAIATLEEAKEQLPNNPTIARWLEKLTKP*
Ga0126311_116560242	3300010045	Serpentine Soil	KSFLGDSPRMLHRFAADALNDSKPEVALKFATRGLSLLANHNMTDFTLYQSLVELRVQILLVLGREDDALAALEEAHEKMPNNPTFTKWIEKLGRMKPRGEA*
Ga0134082_105618952	3300010303	Grasslands Soil	DQETVVREALVQFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFVDRALSLMVNQKLTDLNLFQNLIELRVQILLVLGRAADALAALEEAQQTLPNNPSIAKWIERLQKQRTS*
Ga0134063_104201522	3300010335	Grasslands Soil	AKSFLGDSPRMLHRFAADALNESKPEVALKFVHRALSLMANQRVTDFTLYQSLVELRVQILLVLGRESDAMAALEEAREMLPNNPAIAKWIERLNRGRA*
Ga0134062_102925362	3300010337	Grasslands Soil	LGDSPRMLHRFAADALNESKPEVALKFVHRALSLMANQRVTDFTLYQSLVELRVQILLVLGRESDAMAALEEAREMLPNNPAIAKWIERLNRGRA*
Ga0134121_123517092	3300010401	Terrestrial Soil	FLGDSPRMLHRFAADALNDSKPEVALKFVNRGLSLLPTQDMTDFHLYQNLVELRVQILLVLDRTAEALAGLEEARELLPNNPTIAKWIARLKKK*
Ga0105246_104137611	3300011119	Miscanthus Rhizosphere	DSPRMLHRFAADALNDSKPEVALKFVNRGLSLLPTQDMTDFHLYQSLVELRVQILLVLDRPAEALGGLEEARELLPNNPTIAKWIARLRKK*
Ga0137388_120398812	3300012189	Vadose Zone Soil	SPRMLHRFAADALNESKPEVALKFLDRAMSLISHQKMIDFTLYQSIVELRVQVLLVLARDADALATLEEAREKLPNSPSIAKWIDRLNKAKK*
Ga0137399_116114681	3300012203	Vadose Zone Soil	NDSKPETALKFIDRALSLMSNQKVTDFTLYQSLIELRVQVLMVMGREPEALASLEEAKELMPNSPTITKWIEKLKKQRS*
Ga0137374_106532601	3300012204	Vadose Zone Soil	PRMLHRFAADALNDSKPETALKFVNRALSLMSGQQVTDFALYQLLVELRVQVLLVLDRQADAVATLEEAKEALPNNPSIAKWLEKLKKA*
Ga0137374_107920892	3300012204	Vadose Zone Soil	QFVDAKSFLGDSPRMLHRFAADALNDSKPEVALKFVHRALSLMANQRMTDFTLYQNLVELRVQILLVLERETEALAALEEAREILPNNPTIAKWMERLTKTKS*
Ga0137381_107315801	3300012207	Vadose Zone Soil	VLREALSQFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFIDRALSLMSNQKVTDFSLYQNLIELRVQVLMVMGREPEALASLEEAKELMPNSPTISRWIERLKKQKA*
Ga0137376_101894003	3300012208	Vadose Zone Soil	AADALNDSKPETALKFIDRALSLMSTQKVTDFSLYQNLIELRVQVLMVMGREAEALTSLEEAKELMPNNPSITKWIEKLKRQKVNG*
Ga0137376_102211523	3300012208	Vadose Zone Soil	VREALVQFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFVDRSLLLMSNQKLTDFALFQNLIELRVQILLVLGREDEALRSLEEAKEVLPNSPTIARWIERLNKQRSQ*
Ga0137372_108917822	3300012350	Vadose Zone Soil	VDAKSFLGDSPRMLHRFAADALNDSKPETALKFTDRALLLMSKQKITDFALYQNLVELRVQILMVLGRQEEALSSLEEAKELLPNNPTIARWIDRLTKQRSP*
Ga0137368_105763212	3300012358	Vadose Zone Soil	KFVHRALSLMANQRVTDFTLYQSLVELRVQILLVLDREPEAMAALEEAREMLPNNPAIAKWIERLNRGRA*
Ga0137385_114464022	3300012359	Vadose Zone Soil	SKPDTALKFVDRALSLMSTQKVTDFTLYQNLVELRVQILLVLGRASEALASLEEAREQLPNNPTIAKWIERLRK*
Ga0137360_107711031	3300012361	Vadose Zone Soil	RMLHRFAADALNDSKPDVALKFIHRALSLMSNQKLTDFTLYQSLVELRVQVLLVLGRDVDALSSLEEAREHMPNNPTIARWIERLSKARAAVKSEG*
Ga0136635_103315142	3300012530	Polar Desert Sand	LGDSPRLLHRFAADALNESKPETALKFVDRALSLVSHHQMADLSLYQNLIELRVQILMVMNRNGEAIRTLEDARERLPNSPTILKWLEKLRGRKV*
Ga0137373_100981251	3300012532	Vadose Zone Soil	DSPRMLHRFAADALNESKPEVALKFVHRALSLMANQRVTDFTLYQSLVELRVQILLVLDREPEAMAALEEAREMLPNNPAIAKWIERLNRGRA*
Ga0157298_102475261	3300012913	Soil	FLGDSPRMLHRFAADALNDSKPEVALKFVNRAVSLLSQQKITDFALYQALVELRVQILLVMGREDEALVSLEEAREHLPNNPTVAKWIEKLKKNKPRGEA*
Ga0137396_111315091	3300012918	Vadose Zone Soil	DTALKFVDRALSLMSVQKVTDFTLYQNLVELRVQILLVLGREDDALTALEEAREKLPNNPSITKWIEKVRKTRSRGQA*
Ga0137404_118182761	3300012929	Vadose Zone Soil	PRMLHRFAADALNDSKPEVALKFVNRALGLLSNQHLTDFTLYQALVELRVQILMVLGREADALTSLEEAREQMPNNPTIAKWIERLSKPKKGNA*
Ga0137410_112527272	3300012944	Vadose Zone Soil	SPRMLHRFAADALNDSKPDTALKFVDRALSLMSTQKVTDFTLYQNLVELRVQILLVLGRNSEALASLEEAREQLPNNPTIAKWIERLRK*
Ga0134110_102468291	3300012975	Grasslands Soil	PRMLHRFAADALNESKPEVALKFVHRALSLMANQRVTDFTLYQSLVELRVQILLVLGRESDAMAALEEAREMLPNNPAIAKWIERLNRGRA*
Ga0163162_131247531	3300013306	Switchgrass Rhizosphere	QFVDAKSFLGDSPRMLHRFAADALNDSKPDTALKFVDRALSLMSTQKVTDFTLYQNLVELRVQILLVLGRHSDALASLEEAREQLPNNPTIAKWIERLRK*
Ga0163162_131303492	3300013306	Switchgrass Rhizosphere	LGDSPRMLHRFAADALNDSQPETALKFVDRALSLMSNQKLTDFSLYQMLVELRVQVLLVLGRGDDALASLEEAREHLPNNPSIARWIEKLRKPR*
Ga0120127_101250581	3300013503	Permafrost	LNDSKPETSLKFVDRALSLLTAQQMTDFALYQAVIELRVQVLLVLDRKRDAIATLEEAKEQLPNNPTIARWLEKLTKP*
Ga0120158_103620691	3300013772	Permafrost	MLHRFAADALNDSKPDTSLKFVDRALSLLTAQQMTDFALYQALIELRVQVLLVLDRTRDAVATLEEAKEQLP
Ga0187774_114707761	3300018089	Tropical Peatland	SFLGDSPKMLHRFAADALNDSKPETALKFVDRAMLLMSNQKITDFVLFQSLIELRVQILLVLGREDEALRSLEEAKEILPNNPSIARWMERLNKQKA
Ga0190265_124249562	3300018422	Soil	SKPEVALKFVSRALSLMVGQDITDFTLYQSLVELRVQVLLVLGRDDDALASAEEAKEKLPNNPAIARWIEKLKKNRPRGEA
Ga0066655_109013971	3300018431	Grasslands Soil	FLGDSPRMLHRFAADALNDSKPDVALKFVDRAVSLLNAQQMTDFTLYQALVELRVQILLILGRESDALMTLEEAREKMPNNPTIAKWIEKVRKSQPKGVA
Ga0066655_110565481	3300018431	Grasslands Soil	AKSFLGDSPRMLHRFAADALNDSKPETALKFVDRALSLMVNQKLTDFNLFQNLIELRVQILLVLGRAADALAALEEAQQTLPNNPSIAKWIERLQKQRTS
Ga0066655_111577782	3300018431	Grasslands Soil	VVREALQQFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFTDRALSIMSTQKITDFTLYQSLIELRVQILLVIGREEEALSSLEEAKELLPNNPTISRWIDRLKKQRSQ
Ga0190268_111638092	3300018466	Soil	FLGDSPRMLHRFAADALNDSKPEVALKFVSRALSLLGNQNTTDFTLYQALTELRVQILLILGRDDDARAALEEAHEKLPNNPNIAKWIAKLEKNRPRGEA
Ga0190268_123510691	3300018466	Soil	DALNDSKPEVALKFVNRALSLLGGQQMTDFALYQSLIELRVQILLVMGRENDALISLEEARERMPNNPTIAKWIEKLRKAKPRGEA
Ga0066662_129484762	3300018468	Grasslands Soil	VALKFVTLGLPLLPAQDATDFHLYQNLVELRVQILLVLDRTAEALAGLEEAREMLPNNPTIAKWIARLTKK
Ga0066662_129502981	3300018468	Grasslands Soil	LLQFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFVDRALLLMSNQKITDFALFQNLIELRVQILLVFGREEEALRSLGEAKEVLPNNPTIARWIDRLNKPRSQ
Ga0066669_115210302	3300018482	Grasslands Soil	MIRDGWFPDQETVLREALSQFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFIDRALSLMSNQKVTDFSLYQNLIELRVQVLMVMGREAEALASLEEAKELLPNNPTITR
Ga0066669_117738081	3300018482	Grasslands Soil	KPEVALKLVDRALSLMSTHMLTDFPLYQALVELRVQILLVVGRESDALRSLEEAREKLPNNPTIAKWIDKLNKHRPRGEA
Ga0193749_10630892	3300020010	Soil	EEAVVREALLQFVDAKSFLGDSPRMLHRFAADALNDSKPEVALKFVDRALSLLTAQQMTDFQLYQALVELRVQILLVLGHEADALTTLEEAREKMPNNPTIAKWIEKVRKHQPKGVA
Ga0196958_100539782	3300020181	Soil	PEVALKFVSRALSMLSHQQMTDFTLYQALVELRVQVLLVLGREDDALACAEEAREKMPNNPTIAKWIEKLQKSRPRGEA
Ga0193706_10221603	3300021339	Soil	SFLGDSPRMLHRFAADALNDSKPEVALRFVSRALSLLSNGEMTDFTLYQSLVELRMQVLMVMGREDEALASAEEAREKMPNNPMIARWIERLNRSRPKGEA
Ga0213882_105149971	3300021362	Exposed Rock	FAADALNDSKPEVALKFVDRAVSLMSGEAMSDLALYQSLIELRVQILLILDREAEALSTLEEARERLPNNPSVLKWIEKIQRKRPAAVDG
Ga0193699_101972982	3300021363	Soil	DTPRMLHRFAADALNDSKPEVALKFVNRALSFLPTKELTDFTLYQNLIELRVQILLVLDRTSDALTTLEEAREMLPNNPTIAKWIERLKKKRPAASG
Ga0213880_101536681	3300021953	Exposed Rock	LSQFVHARSFLGDSPRMLHRFAADALNDSKPEVALKFVDRAVSLMSGEAMSDLALYQSLIELRVQILLILDREAEALSTLEEARERLPNNPSVLKWIEKIQRKRPAAVDG
Ga0222622_107492102	3300022756	Groundwater Sediment	PRMLHRFAADALNDSKSETALKFVDRALSLMSTQKVTDFTLYQNLVELRVQILLVLGRNADALSALEEAREHLPNNPTIAKWIERLRK
Ga0247753_10364652	3300022892	Soil	IVREALESFVEAKSFLGDSPRMLHRFAADALNESKPEVALKFANRALSLLANQHITDFALYQAIVELRVQIFLILGRESDALASLEEAREVLPNNPSIAKWIEKLKRTRPRGEA
Ga0247765_11483922	3300023268	Plant Litter	NESKPEVALKFLDRALSLILRQKMTDFTLYQSLIELRVQVLLVLGRDADALASVEAAREHLPNNPSIAKWIDRLKKKQ
Ga0207645_109011392	3300025907	Miscanthus Rhizosphere	DALNDSKPDVALKFVNRATSLLTQNKVTDFALYQALVELRVQVLLVMGREDDALTSLEEAREQLPNNPTIAKWIEKLKKNKPRGEA
Ga0207662_104179342	3300025918	Switchgrass Rhizosphere	DALNDSKPEVALKFVHRALSLMANQRVTDFTLYQSLVELRVQILLVLEREPEAMAALLEARDLLPNNPAIARWIERLTKNGVLSPGS
Ga0207646_105530382	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FAADALNDSKPETALKFVDRALLLMSNQKITDFALFQNLIELRVQILLVLGREDEALRSLGEAKEILPNNPSISRWIDRLNKPRSQ
Ga0207646_106465572	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VIAVVRMQGRQAQMAGQRMEQRMLHRFAADALNDSKPETALKFTDRALSLMSTQKITDFALYQNLIELRVQILMVLGRDDEALSSLEEAKELLPNNPTISRWIDKLRKQRP
Ga0207687_106375581	3300025927	Miscanthus Rhizosphere	PEVALKFSDRALSLLSMQTLTDFSLYQAIVELRVQILLVLGRESDALTALEEAREKLPNNPTIAKWIERLNKVKPKGEA
Ga0207701_101914321	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	KSFLGDSPRMLHRFAADALNDSKPEVALKFVSRALSLMSGQDVTDFTLYQALVELRVQILLVLGREADALASAEEAKENLPNNPAIARWIERLKGKLKIPTS
Ga0207998_10239602	3300025989	Rice Paddy Soil	LNDSKPETALKFVDRALLLMSNQKVTDFTLYQNLIELRVQVLLVLGRQNDAISSLEEAREVLPNNPSIARWMERLKKS
Ga0207641_117912881	3300026088	Switchgrass Rhizosphere	VDAKSFLGDSPRMLHRFAADALNDSKPDVALKFVTRAMSLMSQQKVTDFALYQAVIELRVQVFLVLGRENDALASLEEAREILPNNPSIAKWIEKLMRTRPRGEA
Ga0209131_12838131	3300026320	Grasslands Soil	MLPRFAADALNDSKPEVALKFVNRGLSLLPTQDMTDFHLYQNLVELRVQILLVLDRTAEALTALEEARELLPNNPTIAKWITRLKRVKSEG
Ga0209805_12030721	3300026542	Soil	LHRFAADALNDSKPETALKFVDRALSLMSNQNVTDFSLYQSLIELRVQILLVLGRDSEALNSLEEARELLPNNPSSARWIERLKKQKVNS
Ga0209805_13777311	3300026542	Soil	SFLGDSPRMLHRFAADALNDSKPEVALKFVNRALSLLASETLTDFTLYQALVELRVQILLVLGRESDALASLEEAREKLPNNPTIARWIEKLNKSKPRGEA
Ga0209329_11453081	3300027605	Forest Soil	FVGQRPMPYRTRLPFQRNLLSQFVDAKSFLGDSPRMLHRFAADALNDSKPETALKFIDRALSLMSTQKVTDFSLYQNLIELRVQVLMVMGREPEALASLEEAKELMPNNPSITKWIEKLKRQKVNS
Ga0209798_100693411	3300027843	Wetland Sediment	LRFGQPRHEIQNVRLERLARLKHRFAADALNESKPETALKFADRALSLSAKNKVTDFTLHQALVELRVQILLVLGREVEALTSLEEAREQFPNSPTIARWIEKLRKSR
Ga0247682_10417861	3300028146	Soil	HRFAADALNDSKPEVALKFVNRALSLLPTQTMTDFHLYQSLVELRVQILLVLDRNDEALTGLEEARELLPNNPTIAKWIARLKKK
Ga0268264_118299451	3300028381	Switchgrass Rhizosphere	MLHRFAADALNESKPEVALKFANRALSLLANQHITDFALYQAIVELRVQIFLILGRESDALASLEEAREVLPNNPSIAKWIEKLKRTRPRGEA
Ga0307318_100841972	3300028744	Soil	VREALLHFVDAKSFLGDSPRMLHRFAADALNDSKPEVALKFVSRALSLTNGQNMTDFPLYQALVELRLQILMVLGRDGDALASAEEAREKLPNNPAIARWIEKLNKSRPHGEA
Ga0222749_104553343	3300029636	Soil	VREALSHFVDAKSFLGDSPRMLHRFAADALNESKPEIALKFVNRALSLLPTQTMTDFHLYQSLVELRVQILLVLDRNEEALTGLEEARELLPNNPTIAKWIARLKKK
Ga0307468_1006162031	3300031740	Hardwood Forest Soil	EVALKFVTRAASLLSQQTITDFALYQALMELRVQILLVMGREDDALVSLEEAREQLPNNPTVAKWIEKLRKNRPRGDA
Ga0307468_1020144272	3300031740	Hardwood Forest Soil	ETVLREALNQFVDAKSFLGDSPRMLHRFAADALNDSKPDTALKFVDRALSLMSTQKVTDFTLYQNLVELRVQILLVLGRNTDALASLEEAREHLPNNPTIAKWIERLRK
Ga0307413_115994092	3300031824	Rhizosphere	ALNASKPETALKFVNRAISLIGENVTDFALYQSLVELRVQVLLVLDRGDDALATLEEARDKMPNNPTIAKWIERLKK
Ga0310884_105099102	3300031944	Soil	VREALHQFVDAKSFLGDSPRMLHRFAADALNDSKPEVALKFVTRAISLLSQQKVTDFSLYQALVELRVQVLLVMGREDDALASLEEAREDLPNNPTIAKWIEKLGKNRPRGEA
Ga0307472_1016519451	3300032205	Hardwood Forest Soil	NDSKPEVALKFVNRGLSLLPKQDATDFHLYENLVELKVQILLVLDRTSDALAALEEARETLPNNPTIAKWIARLQKK
Ga0335084_108528172	3300033004	Soil	ALVQFVDAKSFLGDSPKMLHRFAADALNDSKPETALKFVDRALLLMSNQKISDFVLFQSLIELRVQILLILGREDEALRSLEEAKEILPNNPSIARWMERFKKQKV
Ga0364930_0173582_1_210	3300033814	Sediment	LKFVNRAMSLMDGRDATDFTLYQSLVELRVQVLLVLDRQPEAITTLEEARERLPNNPTISKWLEKLNKP
Ga0334915_012641_1297_1566	3300034132	Hypolithic Biocrust	RFAADALNDSKPEVALKFVDRALSLLATQTMTDLNLYQALVELRVQILLVLGREADALTSLEEARQHLPNNPTIAKWIEKLRKTRPAEA
Ga0334928_114494_1_255	3300034134	Hypolithic Biocrust	LNDSKPEVALKFVSRALSLMVGQDITDFTLYQSLVELRVQILLVLGRDDDALASVEEAKEKLPNNPAIARWIEKLKKNRPRGEA
Ga0334964_025024_3_233	3300034146	Sub-Biocrust Soil	ALKFVHRALSLLSNQNTTDFTLYQSLTELRVQILLILGRDADAMVALEEAREKLPNSPNIATWIAKLEKNRPRGEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063498

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences