Metagenome / Metatranscriptome Family F063499

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063499
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	87 residues
Representative Sequence	VPVAWTVKDSKGELLPRFIAGSPREVGRKVVRNRYDAFRLEVSPSYRELFDRDLKSVLAREEWQIVPVKRRTRRRRRNDAQLEFKLN
Number of Associated Samples	75
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.22 %
% of genes near scaffold ends (potentially truncated)	34.88 %
% of genes from short scaffolds (< 2000 bps)	79.07 %
Associated GOLD sequencing projects	70
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.419 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (25.581 % of family members)
Environment Ontology (ENVO)	Unclassified (45.736 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.163 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.83% β-sheet: 14.78% Coil/Unstructured: 57.39%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF06568	DUF1127	21.71
PF00583	Acetyltransf_1	3.10
PF16124	RecQ_Zn_bind	2.33
PF07045	DUF1330	2.33
PF00582	Usp	1.55
PF12695	Abhydrolase_5	1.55
PF00355	Rieske	1.55
PF08592	Anthrone_oxy	1.55
PF13424	TPR_12	1.55
PF03401	TctC	0.78
PF13561	adh_short_C2	0.78
PF00196	GerE	0.78
PF06314	ADC	0.78
PF00496	SBP_bac_5	0.78
PF13410	GST_C_2	0.78
PF14542	Acetyltransf_CG	0.78
PF01609	DDE_Tnp_1	0.78
PF13659	Obsolete Pfam Family	0.78
PF07687	M20_dimer	0.78
PF09996	DUF2237	0.78
PF13683	rve_3	0.78
PF13531	SBP_bac_11	0.78
PF06108	DUF952	0.78
PF13185	GAF_2	0.78
PF03061	4HBT	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	21.71
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	2.33
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.78
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.78
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.78
COG3502	Uncharacterized conserved protein, DUF952 family	Function unknown [S]	0.78
COG4689	Acetoacetate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.78
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.78
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.42 %
Unclassified	root	N/A	25.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.42 %
Unclassified	root	N/A	25.58 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.42 %
Unclassified	root	N/A	25.58 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	26.36 %
Unclassified	root	N/A	25.58 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.58 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20.16 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.63 %
Candidatus Muproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.58 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.63 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.63 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.55 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.78 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.78 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.78 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.63 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.65 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	3.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.78 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.63 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.88 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.10 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.63 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.10 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
unclassified Caulobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.63 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3.10 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	2.33 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.55 %
Caulobacter sp. Root655	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. Root655	0.78 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Candidatus Muproteobacteria bacterium RBG_16_62_13	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101299696	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300000955\|JGI1027J12803_100421695	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300004633\|Ga0066395_10158562	Not Available	1153	Open in IMG/M
3300005093\|Ga0062594_100802753	All Organisms → cellular organisms → Bacteria	870	Open in IMG/M
3300005332\|Ga0066388_100798521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter → unclassified Caulobacter → Caulobacter sp. Root655	1537	Open in IMG/M
3300005332\|Ga0066388_101747834	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300005332\|Ga0066388_103141133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300005332\|Ga0066388_103954121	Not Available	756	Open in IMG/M
3300005332\|Ga0066388_104826894	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005332\|Ga0066388_105183437	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300005332\|Ga0066388_105546806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300005332\|Ga0066388_105648115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	633	Open in IMG/M
3300005366\|Ga0070659_101529022	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005545\|Ga0070695_100043115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2868	Open in IMG/M
3300005713\|Ga0066905_100289172	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300005713\|Ga0066905_100392577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1123	Open in IMG/M
3300005713\|Ga0066905_100518641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	994	Open in IMG/M
3300005764\|Ga0066903_100152426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3325	Open in IMG/M
3300005764\|Ga0066903_101022782	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1513	Open in IMG/M
3300005764\|Ga0066903_102716738	Not Available	960	Open in IMG/M
3300005764\|Ga0066903_103997473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	791	Open in IMG/M
3300005764\|Ga0066903_107875940	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005764\|Ga0066903_108918882	Not Available	508	Open in IMG/M
3300005937\|Ga0081455_10303646	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300005983\|Ga0081540_1000228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58657	Open in IMG/M
3300005983\|Ga0081540_1001882	All Organisms → cellular organisms → Bacteria	17570	Open in IMG/M
3300006800\|Ga0066660_10404076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1128	Open in IMG/M
3300006844\|Ga0075428_100031380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5875	Open in IMG/M
3300006844\|Ga0075428_100136988	All Organisms → cellular organisms → Bacteria	2662	Open in IMG/M
3300006844\|Ga0075428_100137686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2654	Open in IMG/M
3300006845\|Ga0075421_100186460	All Organisms → cellular organisms → Bacteria → Proteobacteria	2576	Open in IMG/M
3300006845\|Ga0075421_100193877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2519	Open in IMG/M
3300006846\|Ga0075430_101710361	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006847\|Ga0075431_100619727	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300006847\|Ga0075431_102099345	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300006852\|Ga0075433_10597041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	969	Open in IMG/M
3300006853\|Ga0075420_100019124	All Organisms → cellular organisms → Bacteria → Proteobacteria	6140	Open in IMG/M
3300006853\|Ga0075420_100232903	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300006854\|Ga0075425_100009948	All Organisms → cellular organisms → Bacteria	10130	Open in IMG/M
3300006871\|Ga0075434_101421945	Not Available	703	Open in IMG/M
3300006880\|Ga0075429_100049108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3669	Open in IMG/M
3300006954\|Ga0079219_10692299	Not Available	772	Open in IMG/M
3300006969\|Ga0075419_10053639	All Organisms → cellular organisms → Bacteria → Proteobacteria	2537	Open in IMG/M
3300006969\|Ga0075419_10202682	All Organisms → cellular organisms → Bacteria → Proteobacteria	1314	Open in IMG/M
3300009012\|Ga0066710_101755975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	940	Open in IMG/M
3300009094\|Ga0111539_10077354	All Organisms → cellular organisms → Bacteria	3916	Open in IMG/M
3300009094\|Ga0111539_10312419	Not Available	1829	Open in IMG/M
3300009094\|Ga0111539_10808509	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300009094\|Ga0111539_11157396	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300009100\|Ga0075418_10421229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1429	Open in IMG/M
3300009100\|Ga0075418_11003117	Not Available	904	Open in IMG/M
3300009100\|Ga0075418_12133061	Not Available	611	Open in IMG/M
3300009100\|Ga0075418_13037076	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300009100\|Ga0075418_13161795	Not Available	501	Open in IMG/M
3300009137\|Ga0066709_102362188	Not Available	725	Open in IMG/M
3300009156\|Ga0111538_10218739	Not Available	2414	Open in IMG/M
3300009156\|Ga0111538_11059320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1026	Open in IMG/M
3300009156\|Ga0111538_12520331	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300009176\|Ga0105242_12224630	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300009792\|Ga0126374_10260406	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300010043\|Ga0126380_11606131	Not Available	580	Open in IMG/M
3300010046\|Ga0126384_10524479	Not Available	1025	Open in IMG/M
3300010046\|Ga0126384_11577985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300010047\|Ga0126382_10184084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1469	Open in IMG/M
3300010047\|Ga0126382_10317312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1178	Open in IMG/M
3300010047\|Ga0126382_10723189	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300010047\|Ga0126382_11125830	Not Available	698	Open in IMG/M
3300010048\|Ga0126373_12290806	Not Available	601	Open in IMG/M
3300010359\|Ga0126376_10045086	All Organisms → cellular organisms → Bacteria	3086	Open in IMG/M
3300010359\|Ga0126376_10853026	Not Available	895	Open in IMG/M
3300010359\|Ga0126376_10856441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300010360\|Ga0126372_11560417	Not Available	698	Open in IMG/M
3300010361\|Ga0126378_10054695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Candidatus Muproteobacteria → Candidatus Muproteobacteria bacterium RBG_16_62_13	3742	Open in IMG/M
3300010361\|Ga0126378_11473579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300010361\|Ga0126378_11982074	Not Available	663	Open in IMG/M
3300010362\|Ga0126377_10109305	All Organisms → cellular organisms → Bacteria → Proteobacteria	2536	Open in IMG/M
3300010362\|Ga0126377_10274112	Not Available	1653	Open in IMG/M
3300010362\|Ga0126377_10853521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300010362\|Ga0126377_11117058	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300010362\|Ga0126377_13089605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300010362\|Ga0126377_13105593	Not Available	536	Open in IMG/M
3300010366\|Ga0126379_10136454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2259	Open in IMG/M
3300010366\|Ga0126379_11036723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300010366\|Ga0126379_11470205	Not Available	787	Open in IMG/M
3300010376\|Ga0126381_102311546	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300010398\|Ga0126383_10058528	All Organisms → cellular organisms → Bacteria	3252	Open in IMG/M
3300011420\|Ga0137314_1104827	Not Available	694	Open in IMG/M
3300012362\|Ga0137361_11070920	Not Available	727	Open in IMG/M
3300012898\|Ga0157293_10029301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1095	Open in IMG/M
3300012922\|Ga0137394_11552401	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300012948\|Ga0126375_10345329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1053	Open in IMG/M
3300012948\|Ga0126375_11755002	Not Available	540	Open in IMG/M
3300012971\|Ga0126369_10785092	Not Available	1034	Open in IMG/M
3300012971\|Ga0126369_13091582	Not Available	545	Open in IMG/M
3300015258\|Ga0180093_1036185	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300015371\|Ga0132258_11935362	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300015372\|Ga0132256_100084177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3053	Open in IMG/M
3300015374\|Ga0132255_100097380	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3984	Open in IMG/M
3300016319\|Ga0182033_10502665	Not Available	1042	Open in IMG/M
3300016422\|Ga0182039_11690686	Not Available	579	Open in IMG/M
3300018058\|Ga0187766_10783786	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300018482\|Ga0066669_11405496	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300020580\|Ga0210403_11423463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300021478\|Ga0210402_10016633	All Organisms → cellular organisms → Bacteria → Proteobacteria	6305	Open in IMG/M
3300022712\|Ga0242653_1020597	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300025929\|Ga0207664_10494595	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300025934\|Ga0207686_11054777	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300026075\|Ga0207708_10504982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1014	Open in IMG/M
3300026118\|Ga0207675_100198068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	1928	Open in IMG/M
3300027880\|Ga0209481_10237543	Not Available	916	Open in IMG/M
3300027909\|Ga0209382_10172800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2491	Open in IMG/M
3300027909\|Ga0209382_10174436	All Organisms → cellular organisms → Bacteria → Proteobacteria	2477	Open in IMG/M
3300027909\|Ga0209382_10362140	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300027909\|Ga0209382_11274138	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300031184\|Ga0307499_10069501	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300031720\|Ga0307469_10105973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1990	Open in IMG/M
3300031740\|Ga0307468_100011220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3524	Open in IMG/M
3300031740\|Ga0307468_100037834	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300031740\|Ga0307468_100536643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	938	Open in IMG/M
3300031833\|Ga0310917_10421618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300031908\|Ga0310900_10817307	Not Available	755	Open in IMG/M
3300031912\|Ga0306921_11797981	Not Available	659	Open in IMG/M
3300031959\|Ga0318530_10322617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300032180\|Ga0307471_101057244	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300032180\|Ga0307471_101243304	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300032180\|Ga0307471_102801900	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300032205\|Ga0307472_101189354	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300032261\|Ga0306920_101454877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	980	Open in IMG/M
3300032828\|Ga0335080_11438131	Not Available	684	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.67%
Host-Associated	Host-Associated	33.33%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.12%
Plants	Host-Associated → Plants	33.33%
Aquatic	Environmental → Aquatic	1.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.65%
Sediment	Environmental → Aquatic → Sediment	1.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	27.13%
Loam	Environmental → Terrestrial → Soil → Loam	16.28%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.55%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	27.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.55%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	25.58%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	24.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.95%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.33%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.33%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.33%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1012996962	3300000364	Soil	MFECGARAVPVAWTVKDKKGELLTRFLAGSPREVARKIVGSRYDAFRLEVSPSYREVFDRDLKTVLAREDWQIVPLKRHTRRRRPNDAQLELKLN*
JGI1027J12803_1004216952	3300000955	Soil	VPVAWTVKDKKGELLTRFLAGSPREVARKIVGSRYDAFRLEVSPSYREVFDRDLKTVLAREDWQIVPLKRHTRRRRPNDAQLELKLN*
Ga0066395_101585623	3300004633	Tropical Forest Soil	VPLAWTVKDSKGELLPRFIAGTPREVARKVVRNRYDPFRLEVSPSYRELFDRDLKSVLAREEWRIVPAKHRAQSRRRNDGQLEFKLN*
Ga0062594_1008027532	3300005093	Soil	VTVAWTVKDSKGELLPGFVAGSRREVGRKIVRNRYDAFRLEVSPSYRELFDRDLEMVLARERWRIVPIKRRTGAHRSNDPARFS*
Ga0066388_1007985214	3300005332	Tropical Forest Soil	VPVAWTVKDSKGELLPRFIAGTPREVARKVVHNRYDAFRLEVSPSYRELFDRDLKSVLAREDWRIVPVKHRAQRRRRNDAQLEFKLN*
Ga0066388_1017478342	3300005332	Tropical Forest Soil	VPVAWTVEDSKGDALPGFVADSPREVGRKVVGNRYDAFRLEVSASYRELFDRDLRAALAREHWRIVPINRVPRTRRRKGEQLEFKLN*
Ga0066388_1031411331	3300005332	Tropical Forest Soil	VPVAWTVKDSKGELLPAFIAGSPREVGRKIAGVRYDAFRLEVSPSYRELFDRDLKSVLQREGWQIVPVKRRTRARRRNGP
Ga0066388_1039541213	3300005332	Tropical Forest Soil	VPVTWGIKDSDGELLARFIAGSPREVGRKVVSNRYDAFRLEVSRSYRELFDRDLKGVLAREQWQIVPIKRGIRRRRRSDAQLELKLN*
Ga0066388_1048268942	3300005332	Tropical Forest Soil	VPGAWTVKDSKGELLPRFIAGTPREVARKVVRNRYDAFRLEVSPSYRELFDRDLKSVLAREEWRIVPVKRRTRRRRRNDAQLEFKLN*
Ga0066388_1051834372	3300005332	Tropical Forest Soil	VCRDRRVKDSKGDLLPRFIADSPRGVGRKIVRNHYDAFRLEVSPSYREVFDRDLKTVLAREHWRIVPIKRHGRACRRNEEQLELKLN*
Ga0066388_1055468062	3300005332	Tropical Forest Soil	MRIVHAWTVIDKNGEPLPRFIAGSPREVGRKVVSNRYDPLRLEVSSSYRERFDRDLQGVLAREEWQIVPIKNRARRRRRSTEQFELKLN*
Ga0066388_1056481151	3300005332	Tropical Forest Soil	MVLPVRSGAGVVTVAWTVKDSKGELIPGFVAGSRREVGRKIVRNRYDAFRLEVSPSYRALFDRDLEMVLAREGWRIVPIKRRTGARRSND
Ga0070659_1015290221	3300005366	Corn Rhizosphere	LPTFADDTISGAEGPIILPISSGAGVVTVAWTVKDSKGELLPGFVAGSRREVGSKIVRNRYDAFRLEVSPSYRELFDRDLEMVLARERWRIVPIKRRTGARRSNDPARFS*
Ga0070695_1000431156	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VTVAWTVKDSKGELLPGFVAGSRREVGRKIVRNRYDAFRLEVSPSYRELFDRDLEMVLARERWRIVPIKRRTGARRSNDPARFS*
Ga0066905_1002891723	3300005713	Tropical Forest Soil	VSVAWTVKDGKGELLPRFIAGTPREVARKVVRNRYDAFRLEVSPSYRELFDRDLKSVLAREEWRIVPVKRLTRRRRRNDAQLEFKLN*
Ga0066905_1003925773	3300005713	Tropical Forest Soil	KDSDGELLPRFIAGSPREVGRKVVRNRYDAFRLEVSRSYRELFDRDLKGVLAREQWQIVPIKRGIRRRRRSGAQLELKLN*
Ga0066905_1005186412	3300005713	Tropical Forest Soil	VPVAWTVKDSKGELLPGFIAGSPREVGRKIAGARYDAFRLEVSPSYREVFDRDLKSVLQREGWQIVPIKRRTRARRRNPAQLELKLN*
Ga0066903_1001524263	3300005764	Tropical Forest Soil	VPVTWTVKDSDGELLPRFIAGSPREVGRKVVRNRYDAFRLEVSRSYRELFDRDLKGVLAREQWQIFPIKRGIRRRRRSGAQLELKLN*
Ga0066903_1010227824	3300005764	Tropical Forest Soil	VPVAWTVKDSKGELLPRFIAGTPREVARKVVRNRYDAFRLEVSPSYREQFDRDLKSVLAREEWRIVRVKRRTRRRRRNDAQLEFKLN*
Ga0066903_1027167383	3300005764	Tropical Forest Soil	VPVAWTVKDSKGELLPRFIAGTPREVARKVVRNRYDLFRLEVSPSYRELFDRDLKSVLAREEWRIVPVKRRTRRRRRNDAQLEFKLN*
Ga0066903_1039974733	3300005764	Tropical Forest Soil	VSAWTVIDRNGELLPHFIAGSPREVGRKVVRNRYDAFRLEVSTSYRKLFDRDVQSVLAREAWRIVPIKRRAPRRR
Ga0066903_1078759402	3300005764	Tropical Forest Soil	WTVKDSKGELLPRFIAGTPREVARKVVRNRYDAFRLEVSPSYRELFDRDLKSVLAREEWRIVPVKRRTRRRRRNDAQLEFKLN*
Ga0066903_1089188822	3300005764	Tropical Forest Soil	VTVAWTVKDSKGDLLPRFIADSPRGVGRKIVRNRYDAFRLEVSPSYREVFDRDLNTVLARERWRIVPIKRHGRACRRNQKQLELKLN*
Ga0081455_103036462	3300005937	Tabebuia Heterophylla Rhizosphere	VPVAWTVKDSKGELVPGLIAGSPREVGRKIARTRYDAFRLEVSPSYRELFDRELKSVLQREGWQIVPLKRRTRAPRPA*
Ga0081540_100022811	3300005983	Tabebuia Heterophylla Rhizosphere	VPVAWTVKNSKGELLPAFIAGSPREVGRKIARGHYDAFRLEVSRSYRELFDRDLNSVLQREGWQIVPVKRQTRVRPRHSAQLALRLN*
Ga0081540_10018824	3300005983	Tabebuia Heterophylla Rhizosphere	VPIVWTVRDSKGELLPRFIAGSPREVARKIVTTRYDAFRLEVSASYREQFDRDLKTVLARHDWQIVPLKCRTRARTGATRASLNSTRP*
Ga0066660_104040763	3300006800	Soil	MSLECGAFAVTVAWTVKDSKGELLPRFIAGSPRVARKILRARYDAFRLEVSPSYRELFDRDLNNVLEREDWQIVPLKRRARTRRRNDAQLEFK
Ga0075428_1000313805	3300006844	Populus Rhizosphere	VTVAWTVKDSKGVLLPRFIAGSPRDVGRKIVRNRYDAFRLEVSPSYRELFDRDLKTVLAREDWRIVPIKRQGRAHLRNEKQLELKLN*
Ga0075428_1001369883	3300006844	Populus Rhizosphere	VPAWTIIDRNGEPLTRFIAGSPREVGRKVVRKPYDAFRLEVSPSYRELFDRDLQSALAHEEWQIVPIKRQARRGRRSAEQLEFKLN*
Ga0075428_1001376865	3300006844	Populus Rhizosphere	VPVAWTVKDSNGELLPGFIAGSPREVGRKIARARYDAFRLEVSPSYRELFDRDLESVLQREGWQIVPIKRRTRARRRNTAQLELKLN*
Ga0075421_1001864604	3300006845	Populus Rhizosphere	VTVAWAVRDSKGDLLPRLIAGSPREVARKIVRNRYDAFRLEVSPSYRELFDRDLKTVLAQENWKIVPIKRHGRARRRNEKQLELKLN*
Ga0075421_1001938774	3300006845	Populus Rhizosphere	VPIAWTVKDSKGVLLPRFIAGTPREVARKIVRGRYDAFRLEVSPCYRELFDRDLKNVLEREDWEIVPLKPRARSRHRSDTQLELKLH*
Ga0075430_1017103611	3300006846	Populus Rhizosphere	AWTVKDSKGVLLPRFIAGTPREVARKIVRGRYDAFRLEVSPCYRELFDRDLKNVLEREDWEIVPLKPRARSRHRSDTQLELKLH*
Ga0075431_1006197271	3300006847	Populus Rhizosphere	VTVAWAVKDSKGDLLPRFIAGSPREVGRKIVRNRYDAFRLEVSPSYRELFDRDLKTVLAQENWRIVPIKRHGRARRRNEKQLELKLN*
Ga0075431_1020993451	3300006847	Populus Rhizosphere	MSQRLECGAFAVTVAWTIKDSKGELLPRFIAASPREVARKILPARYDAFRLEVSPSYRELFDCDLKNVLEREDWQIVPLKRRTRTRRRNDAQLEFKLH*
Ga0075433_105970412	3300006852	Populus Rhizosphere	TWTVKDSKGELLPGFVAGSRREVGRKIVRNRYDAFRLEVSPSYRELFDRDLEMVLAREGWRIVPIKHRAEARRRNDPARIS*
Ga0075420_1000191241	3300006853	Populus Rhizosphere	PRGWMSQRVKCGARVVTVAWAVRDSKGDLLPRLIAGSPREVARKIVRNRYDAFRLEVSPSYRELFDRDLKTVLAQENWKIVPIKRHGRARRRNEKQLELKLN*
Ga0075420_1002329034	3300006853	Populus Rhizosphere	IAWTVKDSKGVLLPRFIAGTPREVARKIVRGRYDAFRLEVSPCYRELFDRDLKNVLEREDWEIVPLKPRARSRHRSDTQLELKLH*
Ga0075425_1000099489	3300006854	Populus Rhizosphere	VVQAWTIIDGTGELLPGFIAVSPREVGRKVVKNRYDAFRLEVSPSYRELFDRDLRTVLAREDWRIAPIKRPSRKRQQ*
Ga0075434_1014219451	3300006871	Populus Rhizosphere	VPVTWGIKDSDGELLARFIAGSPREVGRKVVSHRYDAFRLEVSRSYRELFDRDLKGVLAREQWQIVPIKPGIPVTTRHCHGRSKFQRRRRSDEQLEIKLN*
Ga0075429_1000491082	3300006880	Populus Rhizosphere	MSQRVKGGACVVTVAWTVKDSKGVLLPRFIAGSPRDVGRKIVRNRYDAFRLEVSPSYRELFDRDLKTVLAREDWRIVPIKRQGRAHLRNEKQLELKLN*
Ga0079219_106922991	3300006954	Agricultural Soil	WGIKDSGGELLARFIAGSPREVGRKVVSHRYDAFRLEVSRSYRELFDRDLKGVLAREQWQIVPIKPGIPVTTRHCHGRSKFQRRRRSDEQLEIKLN*
Ga0075419_100536391	3300006969	Populus Rhizosphere	AWTIIDRNGEPLTRFIAGSPRDVGRKIVRNRYDAFRLEVSPSYRELFDRDLKTVLAREDWRIVPIKRQGRAHLRNEKQLELKLN*
Ga0075419_102026821	3300006969	Populus Rhizosphere	KCGACVVTVAWAVKDSKGHLLPRFIAGSPREVGRKIVRNRYDAFRLAVSPSYRELFDRDLKTVLAQENWKIVPIKRHGRARRRNEKQLELKLN*
Ga0066710_1017559751	3300009012	Grasslands Soil	MSLGLECGAFAVTVAWTIQDSKGELLPRFIAGSPREVARKILPARYDAFRLEVSPSYRELFDRDLKNVLEREDWQIVPLKRRTRTRRRGDAQLELKLH
Ga0111539_100773542	3300009094	Populus Rhizosphere	LERRSQGLRVASQARPSCEPLPRFIAGSPREVGRKVVSNRYDPFRLEVSPSYRELFDRDLKSALAREDWRIVRIKRRTRTRRHSTEQLELKLKLN*
Ga0111539_103124193	3300009094	Populus Rhizosphere	VHAWTVINKNGESLPRFIAGSPREVGRKVVSNRYDPFRLEVSSSYRERFDHDLMGVLAREEWRIVPIKRRAGRSRRTTEQLELKLN*
Ga0111539_108085091	3300009094	Populus Rhizosphere	IAASPREVGRKVVGNCYDAFRLEVSPSYRELFDRDLQGILAREDCRIVPIKHCARRRGRSTKQLKLKLN*
Ga0111539_111573963	3300009094	Populus Rhizosphere	MLPVRSGAGVVTVTWTVKDSKGELLPGFVAGSRREVGRKIVRNRYDAFRLEVSPSYRELFDRDLEMVLAREGWRIVPIKHRAEARRRNDPARIS*
Ga0075418_104212291	3300009100	Populus Rhizosphere	VSNVERAVPIAWTVKDSKGVLLPRFIAGTPREVARKIVRGRYDAFRLEVSPCYRELFDRDLKNVLEREDWEIVPLKPR
Ga0075418_110031171	3300009100	Populus Rhizosphere	VRIVPAWTIIDRNGEPLTRFIAGSPREVGRKVVRKPYDAFRLEVSPSYRELFDRDLQSALAHEEWQIVPIKRQARRGRRSAEQLEFKLN*
Ga0075418_121330612	3300009100	Populus Rhizosphere	VNAWTVIDKNGESLPRFIAGSPREVGRKIVSNRYDPFRLEVSPSYRELFDRDLKSALAREDWRIVRIKRRTRTRRHSTEQLELKLKLH*
Ga0075418_130370761	3300009100	Populus Rhizosphere	MSQRLECGAFAVTVAWTIKDSKGELLPRFIAASPREVARKILPARYDAFRLEVSPSYRELFDRDLKNVLEREDWQIVPLKRCARTRRRN
Ga0075418_131617951	3300009100	Populus Rhizosphere	VHAWTVIDKSGEPLPRFIAGSPREVGRKVVSNHYDAFRLEVSPSYRELFERDLKSALAREEWQIAPINRRPRRRRPRDQEQLELSLN*
Ga0066709_1023621881	3300009137	Grasslands Soil	VIAAGVGLHHKDSKGELLPRFIAGSPREVARKTLPARHDAFRLEVSPSYREHFDRDLKSVLEREDWQIVPIKRRARTRRRNDAQLELELKLKLKLKLH*
Ga0111538_102187392	3300009156	Populus Rhizosphere	VRVVHAWTVINKNGESLPRFIAGSPREVGRKVVSNRYDPFRLEVSSSYRERFDHDLMGVLAREEWRIVPIKRRAGRSRRTTEQLELKLN*
Ga0111538_110593201	3300009156	Populus Rhizosphere	VNAWTVIDKNGEPLPRFIAGSPREVGRKVVSNRYDPFRLEVSPSYRELFDRDLKSALAREDWRIVRIKRRTRTRRHSTEQLELKLKLH*
Ga0111538_125203313	3300009156	Populus Rhizosphere	VPLAWTVKDSKGELLPSFIAGSPLEVARKIVRPRYDAFRLEVSPSYRELFDRDLKAALAREDWRIVPLKRRTRKRRRNDAQLELKLN*
Ga0105242_122246301	3300009176	Miscanthus Rhizosphere	LPRFIAGSPREVARQIVTTRYDAFRLEVSASYREQFDRDLKTVLARHDWQIVPSSVAPERTGATKSSLNSMRP*
Ga0126374_102604063	3300009792	Tropical Forest Soil	LPRFIAGTPREVARKVVRNRYDAFRLEVSPSYRELFDRDLKSVLAREEWRIVPVKRRTRRRRRNDAQLEFKLN*
Ga0126380_116061311	3300010043	Tropical Forest Soil	IAGSPREVGRKVVSNRYDAFRLEVSRSYRELFDRDLKGVLAREQWQIVPIKRGIRRRRRSGAQLELKLN*
Ga0126384_105244791	3300010046	Tropical Forest Soil	MSQPVKRGACVVTVAWTVKDSKGDLLPRFIADSPRGVGRKIVRNHYDAFRLEVSRSYREVFDRDLKTVLAREHWRIVPIKRHGRACRRNEEQLELKLN*
Ga0126384_115779851	3300010046	Tropical Forest Soil	VPVAWTVKDSKGELLPRFIAGSPREVGRKVVRNRYDAFRLEVSPSYRELFDRDLKSVLAREEWQIVPVKRRTRRRRRNDAQLEFKLN*
Ga0126382_101840842	3300010047	Tropical Forest Soil	MERTVPVAWTVKDSKGELLPGFIAGSPREVGRKIAGARYDAFRLEVSPSYRELFDRDLKSVLQREGWQIVPVKRRIRARRRNPAQLELKLN*
Ga0126382_103173122	3300010047	Tropical Forest Soil	MERAVPVTWTVKDSNGKLLPRFIGGSPREVGRKVVRNRYDAFRLEVSPSYRDLFDRDLKSVLTREEWRIVPLKRRTRKRRASDAQLELKLN*
Ga0126382_107231893	3300010047	Tropical Forest Soil	VSVAWTVKDGKGELLPRFIAGTPREVARKVVRNRYDAFRLEVSPSYRELFDRDLKSVLAREEWRIVPVKRRTRRRRRNDAQLEFKLN*
Ga0126382_111258301	3300010047	Tropical Forest Soil	VTVTWTVKNSDGELLPRFIAGSPREVGRKVVRNRYDAFRLEVSRSYRELFDRDLKGVLAREQWQIVPVKRGIRRRRRNDAQLELKLH*
Ga0126373_122908061	3300010048	Tropical Forest Soil	LPRFITGTPREVARKVVRNHYDPFRLEVSPSYRELFDRDLKSVLAREEWRIVPVNRGAQRRRRNDAQLEFKLN*
Ga0126376_100450868	3300010359	Tropical Forest Soil	AGTPREVARKVVRNRYDPFRLEVSPSYRELFDRDLKSVLAREEWRIVPVKHRAQSRRRNDGQLEFKLN*
Ga0126376_108530262	3300010359	Tropical Forest Soil	MSQPVKRGACVVTVAWTVKDSKGDLLPRFIADSPRGVGRKIVRNRYDAFRLEVSPSYREVFDRDLNTVLARERWRIVPIKRHGRACRRNQKQLELKLN*
Ga0126376_108564411	3300010359	Tropical Forest Soil	IAGSPREVGLKVVRNRYDAFRLEVSPSYRELFDRDLKSVLAREEWQIVPVKRRTRRRRRNDAQLEFKLN*
Ga0126372_115604171	3300010360	Tropical Forest Soil	SKGELLPRFIAGTPREVARKVVRNRYDPFRLEVSPSYRELFDRDLKSVLAREEWRIVPVKHRAQRRPRNDGQLEFKLN*
Ga0126378_100546954	3300010361	Tropical Forest Soil	VPVAWTIKDSKGELLPRFIAGTPREVARKVVRNRYDPFRLEVSPSYRELFDRDLKSILAREEWRIVPVKHRAQSRRRNDGQLEFKLN*
Ga0126378_114735792	3300010361	Tropical Forest Soil	TVKDSKGELLPRFIASSPREVGRKVVRNRYDAFRLEVSPSYRELFDRDLKSVLAREEWQIVPVKRRTRRRRRNDAQLEFKLN*
Ga0126378_119820741	3300010361	Tropical Forest Soil	LPRFIAGTPREVARKVVRNRYDAFRLEVSPSYRELFDRDLKSVLAREEWRIVPVNRGAQRRRRNDAQLELKLN*
Ga0126377_101093052	3300010362	Tropical Forest Soil	MTQYDGSSDQTLKVECGACAVPVAWTVKDSKGEVLPGFSGGSPREVGRKVARTRYDAFRLEVSPSYRELFDRELKSVLEREGWQIVPLKRRTRVPRPA*
Ga0126377_102741123	3300010362	Tropical Forest Soil	VPVTWGIKDSDGELLLRFIAGSPQEVGRKVVSNRYDAFRREVSRSYRELFDRDLKGVFAREQWQIVPIKRGIRRRRRSDGQLELKLN*
Ga0126377_108535211	3300010362	Tropical Forest Soil	MSKSGARVVPVAWTVEDSKGDPLPGFVADSPREVGRKVVGNRYDAFRLEVSASYRELFDRDLRAALAREHWRIVPINRVPRTRRRKGEQLEFKLN*
Ga0126377_111170583	3300010362	Tropical Forest Soil	MELYGARAVPIVWTVRDGKGELLPHFIAGSPREVARKIVTSRYDAFRLEVSASYREQFDRDLKTVLARHDWQIVPLKRRT
Ga0126377_130896051	3300010362	Tropical Forest Soil	MERTVPVAWTVKDSKGELLPGFIAGSPREVGRKIAGVRYDAFRLEVSPSYRELFDRDLKSVLQREGWQIVPVKCRTRARQRNPAQLELKLN*
Ga0126377_131055932	3300010362	Tropical Forest Soil	LPRFIAGTPREVARKVVRNRYDPFRLEVSPSYRELFDRDLKSILAREEWRIVPVKHRAQSRRRNDGQLEFKLN*
Ga0126379_101364541	3300010366	Tropical Forest Soil	MSQPVKRGACVVTVAWTVKDSKGDLLPRFIADSPRGVGRKIVRNRYDAFRLEVSPSYREVFDRDLNTVLARERWRIVPIKRHGRAC
Ga0126379_110367231	3300010366	Tropical Forest Soil	VELELECEAVPRRQAFGWPVTSGGRAVPVAWTVKDSKGELLPRFIAGSPREVGRKVVRNRYDAFRLEVSPSYRELFDRDLKSVLAREEWQIVPVKRRTRRRRRNDAQLEFKLN*
Ga0126379_114702051	3300010366	Tropical Forest Soil	LPRFIAGTPREVARKVVRNRYDAFRLEVSPSYRELFDRDLKSVLAREEWRIVPAKHRAQSRRRNDGQLEFKLN*
Ga0126381_1023115462	3300010376	Tropical Forest Soil	VWTVKDSKGELLPRFIAGTPREVARKVVRNRYDAFRLEVSPSYRELFDRDLKSILAREEWRIVPVKHRAQSRRRNDGQLEFKLN*
Ga0126383_100585287	3300010398	Tropical Forest Soil	KGELLPRFIAGTPREVARKVVRNRYDPFRLEVSPSYRELFDRDLKSILAREEWRIVPVKHRAQSRRRNDGQLEFKLN*
Ga0137314_11048272	3300011420	Soil	VTAWTVIDSNGELLARFIAGSPREVGRKVVRNRYDPFRLEVSPSYRELFDRDLKSALAREDWQIVPLKRRTQKRRPNKDQLELTLN*
Ga0137361_110709201	3300012362	Vadose Zone Soil	MLAWTVIDRNGELLPRFIAGSPREVGRKVVRNRYDAFRLEVSPSYRESFDRDLGSMLAREHWRIVPIKRRPRRRRRSAEQLELKLN*
Ga0157293_100293011	3300012898	Soil	MSEIIPTRSPGFIAGSRREVAQKIVPARYDAFRLEVSPSYREMFDRDLKTVLAREDWQIVPLKRRTRARPRNHAQLEFKLN*
Ga0137394_115524012	3300012922	Vadose Zone Soil	VERVAVPVAWTVKDSKGELLPRFIGGAPHEVARKIVRARYDAFRLEVSASYRELFDRDLKTVLAREEWQIVPLKRPTRG
Ga0126375_103453291	3300012948	Tropical Forest Soil	VPVAWTVKDSKGELLTRFIAGSPREVGRKVVPNRYDAFRLEVSPSYRELFDRDLKSVLAREEWQIVPVKRRRRRNDAQLEFKLN*
Ga0126375_117550021	3300012948	Tropical Forest Soil	VPVTWGIKDSDGELLARFIAGSPREVARKVVSNRYDAFRLEVSRSYRELFDRDLKGVLAREQWQIVPIKPGIPVTTPHCHGRSKFQRRRRSDGQLELKLN*
Ga0126369_107850921	3300012971	Tropical Forest Soil	VPVAWTVKDSKGELLPRFIASSPREVGRKVVRNRYDAFRLEVSPSYREVFDCDLKSVLAREEWQIVPVKRRTRRRRRNDAQLEFKLN*
Ga0126369_130915821	3300012971	Tropical Forest Soil	LPRLIAGTPREVARKVVRNRYDAFRLVVSPSYRELFDRDLKSVIARKEWRIVPVKRGAQRRRRNDAQFEFKLN*
Ga0180093_10361851	3300015258	Soil	CGVRVVTAWTVIDSNGELLARFIAGSPREVGRKVVRNRYDPFRLEVSPSYRELFDRDLKSALAREDWQIVPLKRRTQKRRPNKDQLELTLN*
Ga0132258_119353622	3300015371	Arabidopsis Rhizosphere	MRVEQGARAVSAAWTVKDGNGDLLPHLMAGSRLEVARKIVSTRYDAFRLQVSSSYREIFDRDLKNVLQREHWQIVPLNGRTRTRRRNCAQLEFKLN*
Ga0132256_1000841774	3300015372	Arabidopsis Rhizosphere	MINVPPNESGARAVPLAWTVKDSKGELLPHFSAGSPRDVARKIVRSPYDAFRLEVSPSYRELFDRDLKAVLAREDWRIVPLRHRRNRKRRRNASQLELKLN*
Ga0132255_1000973803	3300015374	Arabidopsis Rhizosphere	MINVPPNESGARAVPLAWTVKDSKGELLPHFSAGSPRDVARKIVQSPYDAFRLEVSPSYRELFDRDLKAVLAREDWRIVPLRHRRNRKRRRNASQLELKLN*
Ga0182033_105026653	3300016319	Soil	VPVAWTVKDSKGELLPRFIAGTPREVARKVVRNRYDPFRLEVSPSYRELFDRDLKSVLAREEWRIVPVARRRRRNDGQLEFKLN
Ga0182039_116906861	3300016422	Soil	LTVTWTVKDSKGDLLPRFIADSPRGVGRKIVRNRYDAFRLEVSPSYREVFDRDLKTVLAREHWRIVPIKRHGRACRRNEEQLELKLNL
Ga0187766_107837861	3300018058	Tropical Peatland	MCLPVSCGARVVTVAWTVKNSKGDLLPRFIAGSPREVGQKIVSNRYDAFRLEVSPSYRELFDRDLKTVLAREDWRIVPIKRRARAHRRRDAQLEFKLN
Ga0066669_114054962	3300018482	Grasslands Soil	MSLGLECGAFAVTVAWTIQDSKGELLPRFIAGSPREVARKILPARYDAFRLEVSPSYRELFDRDLKNVLEREDWQIVPLKRRTRTRRRNDAQLELKLH
Ga0210403_114234631	3300020580	Soil	LPGFIAVSPREVGRKVVRNRYDAFRLEVSPSYRELFDRDLRTVLAREDWRIVPIKRPTRKRQHDQGGDA
Ga0210402_100166333	3300021478	Soil	LKYGVGVVQAWTIIDGKGELLPGFIAVSPREVGRKVVRNRYDAFRLEVSPSYRELFDRDLRTVLAREDWRIVPIKRPSRKRQHDQGGDA
Ga0242653_10205972	3300022712	Soil	VQAWTIIDGKGELLPGFIAVSPREVGRKVVRNRYDAFRLEVSPSYRELFDRDLRTVLAREDWRIVPIKRPSRKRQHDQGGDA
Ga0207664_104945951	3300025929	Agricultural Soil	AWTIIDGKGELLPGFIAVSPREVGRKVVRNRYDAFRLEVSPSYRELFDRDLRTVLAREDWRIVPIKRPTRKRQHDQGGDA
Ga0207686_110547772	3300025934	Miscanthus Rhizosphere	VPIVWTVRDSKGELLPRFIAGSPREVARQIVTTRYDAFRLEVSASYREQFDRDLKTVLARHDWQIVPSSVAPERTGATKSSLNSMRP
Ga0207708_105049821	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	SGAGVVTVAWTVKDSKGELLPGFVAGSRREVGRKIVRNRYDAFRLEVSPSYRELFDRDLEMVLARERWRIVPIKRRTGAHRSNDPARFS
Ga0207675_1001980682	3300026118	Switchgrass Rhizosphere	VTVAWTVKDSKGELLPGFVAGSRREVGRKIVRNRYDAFRLEVSPSYRELFDRDLEMVLARERWRIVPIKRRTGAHRSNDPARFS
Ga0209481_102375432	3300027880	Populus Rhizosphere	LPRFIAGSPRDVGRKIVRNRYDAFRLEVSPSYRELFDRDLKTVLAREDWRIVPIKRQGRAHLRNEKQLELKLN
Ga0209382_101728004	3300027909	Populus Rhizosphere	VPIAWTVKDSKGVLLPRFIAGTPREVARKIVRGRYDAFRLEVSPCYRELFDRDLKNVLEREDWEIVPLKPRARSRHRSDTQLELKLH
Ga0209382_101744363	3300027909	Populus Rhizosphere	VTVAWTVKDSKGVLLPRFIAGSPRDVGRKIVRNRYDAFRLEVSPSYRELFDRDLKTVLAREDWRIVPIKRQGRAHLRNEKQLELKLN
Ga0209382_103621401	3300027909	Populus Rhizosphere	GWMSQRVKCGARVVTVAWAVRDSKGDLLPRLIAGSPREVARKIVRNRYDAFRLEVSPSYRELFDRDLKTVLAQENWKIVPIKRHGRARRRNEKQLELKLN
Ga0209382_112741382	3300027909	Populus Rhizosphere	VTVAWAVKDSKGDLLPRFIAGSPREVGRKIVRNRYDAFRLEVSPSYRELFDRDLKTVLAQENWRIVPIKRHGRARRRNEKQLE
Ga0307499_100695013	3300031184	Soil	MINVPPNESGARAVPLAWTVKDSKGELLPHFSAGSPRDVGRKIVQPRYDAFRLEVSPSYRELFDRDLKAVLAREDWRIVPLRRRNRKRRRKAGQLELKLN
Ga0307469_101059734	3300031720	Hardwood Forest Soil	VPLAWTVKDSKGELLPSFIAGSPLEVARKIVRTRYDAFRLEVSPSYRELFDRDLKAVLAREDWRIVPLKRRTRKRRRNDAQLELELELELELKLN
Ga0307468_1000112203	3300031740	Hardwood Forest Soil	VTVAWTVKDSKGELLPGFVAGSRREVGRKIVRNRYDAFRLEVSPSYRELFDRDLEMVLARERWRIVPIKRRTGARRSNDPARFS
Ga0307468_1000378344	3300031740	Hardwood Forest Soil	VPLAWTVKDSKGELLPSFIAGSPLEVARKIVRTRYDAFRLEVSPSYRELFDRDLKAALAREDWRIVPLKRRTRKRRRNDAQLELELELELKLN
Ga0307468_1005366431	3300031740	Hardwood Forest Soil	VPVAWTVKNSNGALLPGFIAGSPLEVGRKIARARYDAFRLEVSPSYRQLFDRDLKSVLQREGWQIVPIKRRTRARRRNTAQLELKLN
Ga0310917_104216181	3300031833	Soil	FIAGSPREVGRKVVPNRYDAFRLEVSPSYRELFDRDLKSVLAREEWQIVPVKRRRRCNDAQLEFMLN
Ga0310900_108173072	3300031908	Soil	VHAWTVINKNGESLPRFIAGSPREVGRKVVSNRYDPFRLEVSSSYRERFDHDLMGVLAREEWRIVPIKRRAGRSRRTTEQLELKLN
Ga0306921_117979811	3300031912	Soil	LTVTWTVKDSKGDLLPRFIADSPRGVGRKIVRNRYDAFRLEVSPSYREVFDRDLKTVLAREHWRIVPIKRHGRACRRNEEQLELKLNLRASEYVP
Ga0318530_103226172	3300031959	Soil	KGELLPRFIAGSPREVGRKVVPNRYDAFRLEVSPSYRELFDRDLKSVLAREEWQIVPVKRRRRCNDAQLEFMLN
Ga0307471_1010572441	3300032180	Hardwood Forest Soil	VTVAWTVKDSKGELLPGFVAGSRREVGRKIVRNRYDAFRLEVSPSYRELFDRDLEMVLARERWRIVPIKRRSGARRSNDPARFS
Ga0307471_1012433041	3300032180	Hardwood Forest Soil	VPLAWTVKDSKGELLPSFIAGSPLEVARKIVRTRYDAFRLEVSPSYRELFDRDLKAALAREDWRIVPLKRRTRKRRRNDAQLELELELKLN
Ga0307471_1028019002	3300032180	Hardwood Forest Soil	VPIVWTVRDSKGELLPRFIAGSPREVARQIVTTRYDAFRLEVSASYREQFDRDLKTVLARHDWQIVPLKRRTRAHRRNEGQ
Ga0307472_1011893542	3300032205	Hardwood Forest Soil	VTVAWTVKDSKGELLPGFVAGSRREVGRKIVRNRYDAFRLEVSPSYRELFDRDLEMVLARERWRIVPIKRRTGAHRSND
Ga0306920_1014548773	3300032261	Soil	VPVAWIVKDSKGELLPRFIADTPREVARKVVRNRYDPFRLEVSPSYRELFDRDLKSVLAREEWRIVPVKHCAQRRRRNDGQLEFKLN
Ga0335080_114381312	3300032828	Soil	MLLNVGARAVPAAWTVEDGNGDLLPRFIASSPREVGRKVVRNRYEAFRLQVSPSYRELFDRDLQSVLAREQWRIVPIKRRTRARRRKAEQL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063499

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences