Metagenome / Metatranscriptome Family F063667

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063667
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	59 residues
Representative Sequence	LLEFLGQMRYRAEAVTAFLACLELIRLGVVRAFQARAFAEIHASRTDVVFTSDQIRDTYSE
Number of Associated Samples	117
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.94 %
% of genes near scaffold ends (potentially truncated)	96.12 %
% of genes from short scaffolds (< 2000 bps)	92.25 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.674 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (10.853 % of family members)
Environment Ontology (ENVO)	Unclassified (31.783 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.612 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.46% β-sheet: 8.99% Coil/Unstructured: 59.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF04079	SMC_ScpB	84.50
PF01479	S4	3.88
PF02224	Cytidylate_kin	2.33
PF02616	SMC_ScpA	1.55
PF00575	S1	0.78
PF00849	PseudoU_synth_2	0.78
PF00375	SDF	0.78
PF00156	Pribosyltran	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG1386	Chromosome segregation and condensation protein ScpB	Transcription [K]	84.50
COG0283	Cytidylate kinase	Nucleotide transport and metabolism [F]	2.33
COG1354	Chromatin segregation and condensation protein Rec8/ScpA/Scc1, kleisin family	Replication, recombination and repair [L]	1.55
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.78
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.67 %
Unclassified	root	N/A	2.33 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.67 %
Unclassified	root	N/A	2.33 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.55 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	51.94 %
Thermoanaerobaculia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia	5.43 %
Unclassified	root	N/A	2.33 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.94 %
Thermoanaerobaculales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales	5.43 %
Unclassified	root	N/A	2.33 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Chloracidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium	0.78 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.94 %
Thermoanaerobaculaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae	5.43 %
Unclassified	root	N/A	2.33 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %
Chloracidobacterium thermophilum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	0.78 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.94 %
Thermoanaerobaculum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum	5.43 %
Unclassified	root	N/A	2.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Chloracidobacterium thermophilum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	0.78 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	51.94 %
Thermoanaerobaculum aquaticum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	5.43 %
Unclassified	root	N/A	2.33 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Chloracidobacterium thermophilum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	0.78 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.78 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y02GKR4K	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
2189573004\|GZGWRS401DPK11	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
2209111007\|2215156333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300001976\|JGI24752J21851_1055464	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300003861\|Ga0031654_10089805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300004022\|Ga0055432_10158199	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300004156\|Ga0062589_100080013	All Organisms → cellular organisms → Bacteria	1989	Open in IMG/M
3300004156\|Ga0062589_101164465	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300004463\|Ga0063356_104480841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300004633\|Ga0066395_10230067	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	985	Open in IMG/M
3300005328\|Ga0070676_10326967	All Organisms → cellular organisms → Bacteria → Acidobacteria	1047	Open in IMG/M
3300005330\|Ga0070690_100345305	All Organisms → cellular organisms → Bacteria	1079	Open in IMG/M
3300005332\|Ga0066388_107506119	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005332\|Ga0066388_107699243	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300005343\|Ga0070687_100246142	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	1108	Open in IMG/M
3300005356\|Ga0070674_101267380	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300005363\|Ga0008090_13692678	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300005363\|Ga0008090_14621010	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300005364\|Ga0070673_101952881	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300005440\|Ga0070705_100659208	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300005440\|Ga0070705_101509153	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300005441\|Ga0070700_101977125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300005446\|Ga0066686_11026550	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005457\|Ga0070662_101785623	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005468\|Ga0070707_100611670	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300005471\|Ga0070698_102234620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	501	Open in IMG/M
3300005518\|Ga0070699_100767660	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300005518\|Ga0070699_101066584	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300005518\|Ga0070699_101868404	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005536\|Ga0070697_100069532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	2884	Open in IMG/M
3300005539\|Ga0068853_102235602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300005545\|Ga0070695_101688910	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005547\|Ga0070693_101320890	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300005553\|Ga0066695_10363351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	905	Open in IMG/M
3300005564\|Ga0070664_100488350	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300005568\|Ga0066703_10191469	All Organisms → cellular organisms → Bacteria → Acidobacteria	1239	Open in IMG/M
3300005577\|Ga0068857_101009794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300005719\|Ga0068861_100173349	All Organisms → cellular organisms → Bacteria → Acidobacteria	1789	Open in IMG/M
3300005841\|Ga0068863_102506939	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300005944\|Ga0066788_10062884	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300005993\|Ga0080027_10128626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	963	Open in IMG/M
3300006581\|Ga0074048_12321693	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300006852\|Ga0075433_11633062	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300006854\|Ga0075425_101472993	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300006871\|Ga0075434_102180454	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300006903\|Ga0075426_10930573	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009143\|Ga0099792_10595310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300009148\|Ga0105243_12671903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300009153\|Ga0105094_10813135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300009156\|Ga0111538_11570197	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	829	Open in IMG/M
3300009162\|Ga0075423_10899409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300009792\|Ga0126374_10691806	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300010043\|Ga0126380_12244620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300010046\|Ga0126384_11963047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300010048\|Ga0126373_13307386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300010360\|Ga0126372_11023462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300010366\|Ga0126379_12273710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300010366\|Ga0126379_13140741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300010398\|Ga0126383_13335538	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300010400\|Ga0134122_10114220	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300010403\|Ga0134123_12811902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300011444\|Ga0137463_1166403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300012210\|Ga0137378_11616121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300012211\|Ga0137377_11861736	Not Available	520	Open in IMG/M
3300012350\|Ga0137372_10482744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300012354\|Ga0137366_10225850	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300012360\|Ga0137375_10123395	All Organisms → cellular organisms → Bacteria	2583	Open in IMG/M
3300012360\|Ga0137375_10151505	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300012904\|Ga0157282_10164868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300012955\|Ga0164298_11541771	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300013102\|Ga0157371_11609440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300013306\|Ga0163162_11441954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300014325\|Ga0163163_11544495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300015371\|Ga0132258_10488369	All Organisms → cellular organisms → Bacteria → Acidobacteria	3077	Open in IMG/M
3300015371\|Ga0132258_12021584	All Organisms → cellular organisms → Bacteria → Acidobacteria	1449	Open in IMG/M
3300015374\|Ga0132255_101724118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300016294\|Ga0182041_11333041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300016387\|Ga0182040_11237231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300017792\|Ga0163161_10174176	All Organisms → cellular organisms → Bacteria → Acidobacteria	1647	Open in IMG/M
3300017959\|Ga0187779_10406159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300017961\|Ga0187778_10396237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	905	Open in IMG/M
3300018060\|Ga0187765_10698729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300018061\|Ga0184619_10420919	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	600	Open in IMG/M
3300018422\|Ga0190265_10320091	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	1628	Open in IMG/M
3300019874\|Ga0193744_1012951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1534	Open in IMG/M
3300021080\|Ga0210382_10487048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300021081\|Ga0210379_10046144	All Organisms → cellular organisms → Bacteria	1723	Open in IMG/M
3300021560\|Ga0126371_12249096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300025289\|Ga0209002_10650385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300025904\|Ga0207647_10127120	All Organisms → cellular organisms → Bacteria → Acidobacteria	1500	Open in IMG/M
3300025910\|Ga0207684_10240132	All Organisms → cellular organisms → Bacteria → Acidobacteria → Thermoanaerobaculia → Thermoanaerobaculales → Thermoanaerobaculaceae → Thermoanaerobaculum → Thermoanaerobaculum aquaticum	1563	Open in IMG/M
3300025922\|Ga0207646_10471791	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300025923\|Ga0207681_10647963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300025923\|Ga0207681_10900585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300025931\|Ga0207644_10508142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	995	Open in IMG/M
3300025932\|Ga0207690_10551336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300025933\|Ga0207706_11317952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300025936\|Ga0207670_10082104	All Organisms → cellular organisms → Bacteria	2258	Open in IMG/M
3300025937\|Ga0207669_10705016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300025939\|Ga0207665_10673706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300025942\|Ga0207689_10962338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300026089\|Ga0207648_12038000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300026095\|Ga0207676_10028873	All Organisms → cellular organisms → Bacteria → Acidobacteria	4149	Open in IMG/M
3300026095\|Ga0207676_11350751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300026281\|Ga0209863_10199617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300027722\|Ga0209819_10044139	All Organisms → cellular organisms → Bacteria → Acidobacteria	1525	Open in IMG/M
3300027886\|Ga0209486_11287041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300028380\|Ga0268265_12151115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300031239\|Ga0265328_10046464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Chloracidobacterium → Chloracidobacterium thermophilum	1596	Open in IMG/M
3300031681\|Ga0318572_10601471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300031720\|Ga0307469_10563639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300031720\|Ga0307469_11151440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300031740\|Ga0307468_101321319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300031744\|Ga0306918_10929471	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300031770\|Ga0318521_10413226	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300031954\|Ga0306926_12755305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300032000\|Ga0310903_10469834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300032067\|Ga0318524_10590179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300032076\|Ga0306924_11290829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300032143\|Ga0315292_11663964	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300032205\|Ga0307472_101318022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300032770\|Ga0335085_12559333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300032954\|Ga0335083_10159838	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300033407\|Ga0214472_11203344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300033408\|Ga0316605_12121913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300033433\|Ga0326726_11265202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300034417\|Ga0364941_113096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.22%
Host-Associated	Host-Associated	31.01%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.24%
Plants	Host-Associated → Plants	31.01%
Aquatic	Environmental → Aquatic	6.98%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.73%
Freshwater	Environmental → Aquatic → Freshwater	4.65%
Sediment	Environmental → Aquatic → Sediment	1.55%
Marine	Environmental → Aquatic → Marine	0.78%
Peat	Environmental → Terrestrial → Peat	0.78%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.78%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%
Roots	Host-Associated → Plants → Roots	0.78%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.43%
Loam	Environmental → Terrestrial → Soil → Loam	15.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.30%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.20%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.10%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.55%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.78%
Lake	Environmental → Aquatic → Freshwater → Lake	0.78%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.10%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.33%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.33%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.55%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.55%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.78%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.10%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.10%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.33%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.33%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.33%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.33%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.33%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.33%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.55%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.55%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	1.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.55%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.55%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.78%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.78%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%
Speleothem And Rock Wall Surfaces	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Speleothem And Rock Wall Surfaces	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
2209111007	Cave microbial community (Dry rock wall)	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009153	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019874	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025289	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031239	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG	Host-Associated	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_00530710	2170459021	Switchgrass, Maize And Mischanthus Litter	TAFLATLERIRLGRRAGVPAAAFGESHVTRTDIPFSAADVRDTYA
FG2_08617530	2189573004	Grass Soil	MIELLERLDAARTMPLLEFLGQMRYRAEAVTAFLACLELIRLGVVRAFQIRAFAEIHASRTDLPFTAQQIRDNTRITGHERS
2214248059	2209111007	Speleothem And Rock Wall Surfaces	GRLEEGKSLPLLEFLGSMRYRAEAVTAFLAALELIRLGVVRVFQARPFGEIYAARTKAPFLEEQVRDDYR
JGI24752J21851_10554641	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	KRTMPLLEFLGQMRYRAEAVTAFLACLELIRLGVVRAFQARAFAEIHASRTDVVFTSDQIRDTYSE*
Ga0031654_100898051	3300003861	Freshwater Lake Sediment	MIELLERLDAARTMSLLEFLGQMRYRAEAVTTFLACLELIRLGVVRAFQPRPFAEIHATRTDLPFTI
Ga0055432_101581991	3300004022	Natural And Restored Wetlands	RAEAVTAFLATLELIRLGVVTVYQSSAFAEIHVSRTEAPFSLDSIRDTYR*
Ga0062589_1000800133	3300004156	Soil	ELIRLGVVRAFQARAFAEIHASRTDIVFTPEQIRDTYSE*
Ga0062589_1011644651	3300004156	Soil	AEAVTAFLATLELIRLGVARAFQRSAFGEIHVTRTDVAFSAADVRDTYA*
Ga0063356_1044808411	3300004463	Arabidopsis Thaliana Rhizosphere	ELIRLGVVRAFQARAFAEIHASRTDVVFTPEQIRDTYSE*
Ga0066395_102300672	3300004633	Tropical Forest Soil	LGAMRYRAEAVTAFLAALELVRLGVIRVFQGGPFAEIHATRTDVPFSAEQVRDTYR*
Ga0070676_103269671	3300005328	Miscanthus Rhizosphere	QFRAEAVTAFLATLELIRLGVARAFQKSAFGEIHVTRTDVPFSAADVRDTYA*
Ga0070690_1003453051	3300005330	Switchgrass Rhizosphere	MRYRAEAVTAFLACLELIRLGVVRAFQARAFAEIHASRTDVVFTSDQIRDTYSE*
Ga0066388_1075061192	3300005332	Tropical Forest Soil	FSVRDKMLELLARLDEKRTMPLLEFLGQMSYRAEAVTAFLACLELIRLGVVRAFQTRPFAEIHATRTDVVFSADQIRDTYSE*
Ga0066388_1076992432	3300005332	Tropical Forest Soil	MPLLEFLGQMRYRAEAVTAFLACLELIRLGVVRAFQIRAFAEIHASRTDLPFTAQQIRDNYSE*
Ga0068868_1023158252	3300005338	Miscanthus Rhizosphere	TLELIRLGVARAFQKSAFGEIHVTRTDVPFSAADVRDTYA*
Ga0070687_1002461421	3300005343	Switchgrass Rhizosphere	AMPLLDFLGKMQYRAEAVTAFLACLELVRLQVVRVYQPRAFSEIHASRTELPFTADQIRDTYSE*
Ga0070674_1012673802	3300005356	Miscanthus Rhizosphere	DEKRTMPLLEFLGQMRYRAEAVTTFLACLELIRLGVVRAFQARPFAEIHASRTETAFSADQIRDNYAD*
Ga0008090_136926782	3300005363	Tropical Rainforest Soil	KMFQLVERLEKSGQDLPLLEFLGEMTYRAEAVTAFLATLELIRLGVVRAFQAAAFKEIHIRRTETPFVAEQVRDTYR*
Ga0008090_146210102	3300005363	Tropical Rainforest Soil	MRYRAEAVTAFLACLELIRLGVVRAFQIRPFAEIHATRTDVPFTAQQIRDNYSE*
Ga0070673_1019528812	3300005364	Switchgrass Rhizosphere	FLGQMHYRAEAVTAFLACLELIRLGVIRAFQIRPFAEIHASRTDLVFTPDQIRDTYRE*
Ga0070705_1006592082	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	FLGKMQYRAEAVTAFLACLELVRLQVVRVYQPRAFSEIHASRTELPFTADQIRDTYSE*
Ga0070705_1015091531	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RLDERRTLPLLDFFGEMQFRAEAVTAFLATLELIRLGVARAFQKSAFGEIHVTRTDVPFSAADVRDTYA*
Ga0070700_1019771252	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LATLELIRLGVARAFQKSAFGEIHVTRTDVPFSAADVRDTYA*
Ga0066686_110265502	3300005446	Soil	EWLGTMSYRAEAVTAFLATLELVRLGVARALQLAPFGEIYAERTEVPFSAEQVRDTYR*
Ga0070662_1017856232	3300005457	Corn Rhizosphere	RTLPLLDFFGEMQFRAEAVTAFLATLELIRLGVARAFQKSAFGEIHVTRTDVPFSAADVRDTYA*
Ga0070707_1006116701	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRYRAEAVTAFLACLELIRLGVIRVFQSHAFAEIHVRRTELPFVSEQIRDNYGD*
Ga0070698_1022346201	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	PLLELLGQFAYRAEAVTAFLATLELIRLGVVKAFQAAPFEEIHVRRTEVAFSKEQVRDTYR*
Ga0070699_1007676602	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	FAYRAEAVTAFLATLELIRLGVVKAFQAAPFEEIHVRRTEVAFSKEQVRDTYR*
Ga0070699_1010665842	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VTAFLACLELIRLGVIRVFQSHAFAEIHVRRTELPFVSEQIRDNYGD*
Ga0070699_1018684042	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LEFWGAMRYRAEAVTAFLATLELIRLGAVRVFQAAALAEIHATRTEVPFFPDQVRDTYR*
Ga0070697_1000695321	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	YRAEAVTAFLATLELIRLGVVRIFQPVPFAEIHATRTDVPFSTEQVRDTYR*
Ga0068853_1022356021	3300005539	Corn Rhizosphere	EAVTAFLACLELIRLGVIRAFQIRPFAEIHASRTDLVFTPDQIRDTYRE*
Ga0070695_1016889101	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	KRTLPLLDFLGEMQFRAEAVTAFLAILELIRLGVARAFQRSAFGEIHVTRTDVAFSAADVRDTYA*
Ga0070693_1013208902	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LLEFLGQMHYRAEAVTAFLACLELIRLGVIRAFQIRPFAEIHASRTDLVFTPDQIRDTYRE*
Ga0066695_103633511	3300005553	Soil	IRLGVARAFQRAAFGEIHVTRTDVSFAAADVRDTYR*
Ga0070664_1004883501	3300005564	Corn Rhizosphere	YRAEAVTAFLACLELVRLQVVRVYQPRAFSEIHASRTELPFTADQIRDTYSE*
Ga0066703_101914693	3300005568	Soil	EMQFRAEAVTAFLAVLELIRLGVARAFQRAAFGEIHVTRTDISFAAADVRDTYR*
Ga0068857_1010097941	3300005577	Corn Rhizosphere	FLACLELIRLGVIRAFQIRPFAEIHASRTDLVFSPDQIRDTYRE*
Ga0068861_1001733491	3300005719	Switchgrass Rhizosphere	AFLATLELIRLGVARAFQKSAFGEIHVTRTDVPFSAADVRDTYA*
Ga0068863_1025069391	3300005841	Switchgrass Rhizosphere	ARLQASGGTMPLLAFLGEMAYRAEAVTAFLATLELVRLGVLTAFQPSAFAEIHVSRTPAPFDLEQVKDTYR*
Ga0066788_100628842	3300005944	Soil	VERLEKSGTMPLLEFWGAMRFRAEAVTAFLATLELIRLGVVRAFQAAPFAEIHATRTDVAFSPDQVRDTYR*
Ga0080027_101286262	3300005993	Prmafrost Soil	PLLDFLGRMTYRAEAVTTFLACLELIRLGVVRAFQARPFAEIHASRTDLPFTVQQIRDNYSE*
Ga0074048_123216932	3300006581	Soil	DRTLPLLEFLGTMHYRAEAVTAFLAALELIRLGVVRVFQPAPFAEIHATRTDVAFSAEQVRDTYR*
Ga0075433_116330622	3300006852	Populus Rhizosphere	EFEFRAEAVTSFLAFLELIRLGVARAFQKVAFGEIHVTRTDVVFTAADVRDTYR*
Ga0075425_1014729931	3300006854	Populus Rhizosphere	AEAVTAFLAALELIRLGVVTVFQRAAFGEILVSRTEMEFSVDEVKDTYR*
Ga0075434_1021804541	3300006871	Populus Rhizosphere	LLEFLGQMRYRAEAVTAFLACLELIRLGVVRAFQARAFAEIHASRTDVVFTSDQIRDTYSE*
Ga0075426_109305731	3300006903	Populus Rhizosphere	EAVTAFLACLELIRLGVVSAFQSRPFAEVHVRRTELPFLAEQIRDNYRD*
Ga0099792_105953101	3300009143	Vadose Zone Soil	AEAVTAFLATLELIRLGVVRVFQTAPFAEIHATRTDVPFSTEQVRDTYR*
Ga0105243_126719031	3300009148	Miscanthus Rhizosphere	KTLPLLEFLGAMQYRAEAVTAFLATLELIRLGVVRVFQTAPFAEIHATRTDVPFSTEQVRDTYR*
Ga0105094_108131351	3300009153	Freshwater Sediment	ELLARLDEHKTMPLLEFLGQMRYRAEAVTAFLACLELIRLGVVRAFQTRAFAEIHATRTDVVFTPDQIRDTYSE*
Ga0111538_115701971	3300009156	Populus Rhizosphere	RGSLPLLELLGQMRYRAEAVTAFLATLELVRLGVVTAYQPAAFAEIHVSRTEVPFSVDQIRDEYR*
Ga0075423_108994091	3300009162	Populus Rhizosphere	RRTVPLLEFFGEFEFRAEAVTSFLAFLELIRLGVARAFQKVAFGEIHVTRTDVVFTAADVRDTYR*
Ga0126374_106918062	3300009792	Tropical Forest Soil	SVRDKMLELLARLDEKRTMPLLEFLGQMSYRAEAVTAFLACLELIRLGVVRAFQTRPFAEIHATRTDVVFSANQIRDTYSE*
Ga0126380_122446201	3300010043	Tropical Forest Soil	RLDAARTMPLLEFLGQMRYRAEAVTAFLACLELIRLGVVRAFQIRPFAEIHATRTDTPFTAQQIRDNYSE*
Ga0126384_119630472	3300010046	Tropical Forest Soil	TLPLLEFLGTMRYRAEAVTAFLAALELIRLGVVRVFQTAAFGEIHATRTEVTFSAEQVRDTYR*
Ga0126373_133073861	3300010048	Tropical Forest Soil	ELIRLGVVRAFQIRPFAEIHATRTDVPFTAQQIRDNYAE*
Ga0126372_110234621	3300010360	Tropical Forest Soil	EKRTMPLLEFLGQMRYRAEAVTAFLACLELIRLGVVRAFQTRAFAEIHATRTDVVFSADQIRDTYSE*
Ga0126379_122737102	3300010366	Tropical Forest Soil	QQLVERLEAAGTLPLLQFLGEMHYRAEAVTAFLATLELIRLGIVTAYQPSAFAEIHVSRTEAPFSIDQIRDTYR*
Ga0126379_131407411	3300010366	Tropical Forest Soil	LPLLTFLGEMAYRAEAVTAFLATLELIRLGVVRAFQASPFGEIHVHRTEAVFDATQIRDTYR*
Ga0126383_133355382	3300010398	Tropical Forest Soil	VTAFLACLALIRLGVVRAFQARAFAEIHASRTDVVFTADQIRDTYSE*
Ga0134122_101142201	3300010400	Terrestrial Soil	RTLPLLDFLGEMQFRAEAVTAFLAILELIRLGVARAFQRSAFGEIHVTRTDVAFSAADVRDTYA*
Ga0134123_128119021	3300010403	Terrestrial Soil	DLLARLDEKRTLPLLDFLGEMQFRAEAVTAFLAILELIRLGVARAFQRSAFGEIHVTRTDVAFSAADVRDTYA*
Ga0137463_11664032	3300011444	Soil	RLDSERTLSLLDFLGTMRYRAEAVTAFLATLELIRLGVVRIFQPVPFGEIHATRTDVPFSTEQVRDTYR*
Ga0137378_116161211	3300012210	Vadose Zone Soil	TAFLAVLELIRLGVARAFQRAAFGEIHVTRTDVAFTAVDVRDTYR*
Ga0137377_118617361	3300012211	Vadose Zone Soil	LEIRHLRFSVADKMVQLVERLEASGPDLPLLELLGQFAYRAEAVTAFLATLELIRLGVVKVFQAAPFEEIHVMRTEVAFSKEQVRDTYR*
Ga0137372_104827441	3300012350	Vadose Zone Soil	RDRTLPLLEFLGTMHYRAEAVTAFLAALELIRLGVVRVFQTAAFGEIHATRTDVAFSAEQVRDTYR*
Ga0137366_102258503	3300012354	Vadose Zone Soil	AEAVTAFLATLELIRLGVVRAFQAAPFEEIHVRRTEVAFDVEQVRDTYR*
Ga0137375_101233951	3300012360	Vadose Zone Soil	LEFLGTMRYRAEAVTAFLATLELIRLGVVRVFQPVPFGQIHATRTDVPFFTEQVRDTYR*
Ga0137375_101515054	3300012360	Vadose Zone Soil	VTAFLAALELIRLGVARAFQRSAFGEIHVTRTDVAFATSDVRDTYR*
Ga0157282_101648682	3300012904	Soil	RAEAVTAFLACLELIRLGVVRAFQVRAFAEIHASRTDVVFTPEQIRDTYSE*
Ga0164298_115417711	3300012955	Soil	TAFLACLELIRLGVVRAFQARAFAEIHASRTDVVFTSDQIRDTYSE*
Ga0157371_116094401	3300013102	Corn Rhizosphere	RAEAVTAFLACLELIRLGVVRAFQARAFAEIHASRTDVVFTPEQIRDTYSG*
Ga0163162_114419542	3300013306	Switchgrass Rhizosphere	AVTAFLACLELIRLGVIRAFQIRPFAEIHASRTDLVFTPDQIRDTYRE*
Ga0163163_115444951	3300014325	Switchgrass Rhizosphere	PLLDFLGKMQYRAEAVTAFLACLELVRLQVVRVYQPRAFSEIHASRTELPFTADQIRDTYSE*
Ga0132258_104883691	3300015371	Arabidopsis Rhizosphere	VERLEASGTLPLLQFLGEMSYRAEAVTAFLATLELVRLGVVTAYQPAAFAEIHVARTDVPFSVANLRDEYR*
Ga0132258_120215843	3300015371	Arabidopsis Rhizosphere	LPLLDFFGEMQFRAEAVTAFLATLELIRLGVARAFQRSAFGEIHVTRTDVPFSAADVRDTYA*
Ga0132255_1017241182	3300015374	Arabidopsis Rhizosphere	ELLARLDEHRTMPLLEFLGQMRYRAEAVTAFLACLELIRLGVVRAFQARAFAEIHASRTDVVFTPDQIRDTYSE*
Ga0182041_113330412	3300016294	Soil	EKMVELLERLDAARTMPLLEFLGQMSYRAEAVTAFLACLELIRLGVVRAFQIRPFAEIHATRTDVPFTAQQIRDNYAE
Ga0182040_112372311	3300016387	Soil	KMIELLERLDAARSMPLLEFLGQMRYRAEAVTSFLACLELIRLGVVRAFQVRPFAEIHATRTDVPFTAQQIRDNYAE
Ga0163161_101741761	3300017792	Switchgrass Rhizosphere	FLGQMHYRAEAVTAFLACLELIRLGVIRAFQIRPFAEIHASRTDLVFTPDQIRDTYRE
Ga0187779_104061591	3300017959	Tropical Peatland	LLEFLGQMRYRAEAVTAFLACLELIRLGVVRVFQARPFAEIHASRTDVPFTAQQIRDNYA
Ga0187778_103962372	3300017961	Tropical Peatland	MRDLVGRLEAAASLPLLEFFGEMHYRAEAVTAFLATLELVRLGVVTVFQHAPFGEIHVSRTGVPFSLEQIKDTYR
Ga0187765_106987291	3300018060	Tropical Peatland	AVTTFLACLELIRLGVVRAFQIRAFAEIHASRTEVPFTAQQIRDNYAE
Ga0184619_104209191	3300018061	Groundwater Sediment	TAFLATLELIRLGVVKVFQAAPFEEIHVRRTEVAFSKEQVRDTYR
Ga0190265_103200911	3300018422	Soil	RLDENRTLPLLDFLGAMRFRAEAVTAFLATLELIRLGVARAFQQTPFGEIHVTRTDVSFTTADVRDTYR
Ga0193744_10129512	3300019874	Soil	MLELVERLEKTGSMSLLEFWGAMRYRAEAVTAFLATLELIRLGIVRVFQAAQFAEIHASRTEAAFSPEQVRDTYR
Ga0210382_104870482	3300021080	Groundwater Sediment	FRAEAVTAFLATLELIRLGVARAFQRSAFGEIHVTRTDVAFSAADVRDTYA
Ga0210379_100461441	3300021081	Groundwater Sediment	TFLACLELIRLGVLRAFQTRPFAEIHASRTELPFSAQQIRDNYSE
Ga0126371_122490962	3300021560	Tropical Forest Soil	EAARTMPLLEFLGQMRYRAEAVAAFLACLELIRLGVVRAFQLRPFAEIHATRTDVPFTAQQIRDNYAE
Ga0209002_106503851	3300025289	Soil	LEFLGEMAFRAEAVTAFLAILELIRLGVARAFQKTAFGEIHVTRTDIAYTTADVRDTYL
Ga0207647_101271203	3300025904	Corn Rhizosphere	GEMQFRAEAVTAFLATLELIRLGVARAFQKSAFGEIHVTRTDVPFSAADVRDTYA
Ga0207684_102401323	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	QMNYRAEAVTAFLATLELIRLGVVRVFQAAAFEEIHVHRTEVPFSREQVRDTYR
Ga0207646_104717911	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LDRVEAARTMPLLEFLGQMRYRAEAVTAFLACLELIRLGVIRVFQSHAFAEIHVRRTELPFVSEQIRDNYGD
Ga0207681_106479631	3300025923	Switchgrass Rhizosphere	LGQMHYRAEAVTAFLACLELIRLGVIRAFQIRPFAEIHASRTDLVFTPDQIRDTYRE
Ga0207681_109005852	3300025923	Switchgrass Rhizosphere	YRAEAVTAFLACLELIRLGVVRAFQARAFAEIHASRTDVVFTPEQIRDTYSE
Ga0207644_105081421	3300025931	Switchgrass Rhizosphere	LGVVRAFQARAFAEIHASRTDVVFTSDQIRDTYSE
Ga0207690_105513362	3300025932	Corn Rhizosphere	MPLLEFLGQMHYRAEAVTAFLACLELIRLGVIRAFQIRPFAEIHASRTDLVFTPDQIRDTYRE
Ga0207706_113179522	3300025933	Corn Rhizosphere	RLRVFLARLDERRTLPLLDFFGEMQFRAEAVTAFLATLELIRLGVARAFQKSAFGEIHVTRTDVPFSAADVRDTYA
Ga0207670_100821041	3300025936	Switchgrass Rhizosphere	MIELLARLDEARAMPLLDFLGKMQYRAEAVTAFLACLELVRLQVVRVYQPRAFSEIHASRTELPFTADQIRDTYSE
Ga0207669_107050161	3300025937	Miscanthus Rhizosphere	LGQMRYRSEAVTAFLACLELIRLGVVRAFQARAFAEIHASRTDVVFTPEQIRDTYSE
Ga0207665_106737061	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	EDESRFLEVCVGIAPVHLLGRLDSERTLSLLDFLGAMQYRAEAVTAFLATLELIRLGVVRVFQPAPFGEIHATRTDVPFSTEQVRDTYR
Ga0207689_109623382	3300025942	Miscanthus Rhizosphere	GQMRYRAEAVTAFLACLELIRLGVVRAFQARAFAEIHASRTDIVFTPEQIRDTYSE
Ga0207677_120529112	3300026023	Miscanthus Rhizosphere	TLELIRLGVARAFQKSAFGEIHVTRTDVPFSAADVRDTYA
Ga0207648_120380001	3300026089	Miscanthus Rhizosphere	KRTMPLLEFLGQMRYRAEAVTAFLACLELIRLGVVRAFQARAFAEIHASRTDVVFTSDQIRDTYSE
Ga0207676_100288735	3300026095	Switchgrass Rhizosphere	LACLELIRLGVIRAFQIRPFAEIHASRTDLVFTPDQIRDTYRE
Ga0207676_113507512	3300026095	Switchgrass Rhizosphere	LLERVDEARTMPLLDFLGRMTYRAEAVTTFLACLELIRLGVVRAFQARPFAEIHATRTDLPFTVQQIRDNYSE
Ga0209863_101996172	3300026281	Prmafrost Soil	LACLELIRLGVVRAFQARPFAEIHASRTDLPFTVQQIRDNYSE
Ga0209819_100441393	3300027722	Freshwater Sediment	RLGVVRAFQIRPFAEIHTSRTDIVFTPDQIRDTYSE
Ga0209486_112870411	3300027886	Agricultural Soil	DFLGTMQFRAEAVTAFLATLELVRLGVARAFQRAAFGEIHVTRTDVPFTIDDVRDTYR
Ga0268265_121511151	3300028380	Switchgrass Rhizosphere	HRTMPLLEFLGQMRYRAEAVTAFLACLELIRLGVVRAFQARAFAEIHASRTDVVFTPEQIRDTYSE
Ga0265328_100464643	3300031239	Rhizosphere	ACLELIRLGVVRAFQPKSFAEIHATRTDLPFTAQQIRDNYAE
Ga0318572_106014711	3300031681	Soil	FLACLELVRLQVIRVYQPRAFSEIHASRTDLPFTAEQIRDTYAE
Ga0307469_105636392	3300031720	Hardwood Forest Soil	LSLLDFLGAMQYRAEAVTAFLATLELIRLGVVRVFQPAPFGEIHATRTDVPFSTEQVRDTYR
Ga0307469_111514401	3300031720	Hardwood Forest Soil	YRAEAVTAFLATLELIRLGVVRVFQTAPFAEIHATRTDVPFSTEQVRDTYR
Ga0307468_1013213192	3300031740	Hardwood Forest Soil	LTRLDQARTMPLLEFLGQMQYRAEAVTSFLACLELIRLGVVRVFQTRPFAEIHAHRTELAFSADEIRDNYGE
Ga0306918_109294712	3300031744	Soil	EAVTAFLACLELIRLGVVRAFQIRPFAEIHATRTDVPFTAQQIRDNYAE
Ga0318521_104132261	3300031770	Soil	DQYRLAHPPSLAIHHLRFSVRDKMIELLTRLDEARAMPLLEFLGKMQYRAEAVTAFLACLELVRLQVIRVYQPRAFSEIHASRTDLPFTAEQIRDTYAE
Ga0306926_127553052	3300031954	Soil	ELLERLDAARTLPLLEFLGQMRYRAEAVTAFLACLELIRLGVVRAFQIRPFAEIHATRTDVPFTAQQIRDNYSE
Ga0310903_104698341	3300032000	Soil	AVTAFLACLELIRLGVVRAFQIRPFAEIHASRTDLVFTPEQIRDTYRE
Ga0318524_105901791	3300032067	Soil	ARTMPLLEFLGQMRYRAEAVTAFLACLELIRLGVVRAFQIRPFAEIHATRTDVPFTAQQIRDNYSE
Ga0306924_112908291	3300032076	Soil	GQMRYRAEAVTAFLACLELIRLGVVRAFQIRPFAEIHATRTDVPFTAQQIRDNYAE
Ga0315292_116639641	3300032143	Sediment	LIRLGVVRAFQTRPFAEIHASRTELPFTAQQIRDNYSE
Ga0307472_1013180222	3300032205	Hardwood Forest Soil	CLELVRLQVVRVFQPRPFAEIHASRTEMAFTADQIRDTYAE
Ga0335085_125593332	3300032770	Soil	RTMPLLEFLGQMRYRAEAVTTFLACLELIRLGVVRAFQIRPFAEIHASRTEVPFTAQQIRDNYAE
Ga0335083_101598384	3300032954	Soil	LGVVRAFQIRPFAEIHASRTEVPFTAQQIRDNYAE
Ga0214472_112033441	3300033407	Soil	PLLEFLGEMSLRAEAVTAFLAFLELVRLGVARAFQKAAFGEIHVTRTDVVYTAADVRDTY
Ga0316605_121219132	3300033408	Soil	RTMPLLEVLGQMRYRAEAVTAFLACLELIRLGVVRAFQTRAFAEIHATRTDAVFTPDQIRDTYSE
Ga0326726_112652021	3300033433	Peat Soil	YRAEAVTAFLATLELIRLGVVRVFQAVPFGEIHATRTDVPFSTEQVRDTYR
Ga0364941_113096_5_196	3300034417	Sediment	MPLLDFLGRMNYRAEAVTTFLACLELIRLGVVRAFQTRPFAEIHASRTELPFSAQQIRDNYSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063667

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences