Metagenome / Metatranscriptome Family F063784

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063784
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	98 residues
Representative Sequence	VADNVHDTPEEAAYRAQMAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA
Number of Associated Samples	103
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.12 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	88.37 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.566 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (12.403 % of family members)
Environment Ontology (ENVO)	Unclassified (37.209 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (56.589 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.66% β-sheet: 1.63% Coil/Unstructured: 44.72%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF12681	Glyoxalase_2	10.08
PF13520	AA_permease_2	8.53
PF00719	Pyrophosphatase	4.65
PF00903	Glyoxalase	4.65
PF01814	Hemerythrin	3.88
PF03308	MeaB	2.33
PF00196	GerE	1.55
PF00248	Aldo_ket_red	0.78
PF04261	Dyp_perox	0.78
PF00291	PALP	0.78
PF03437	BtpA	0.78
PF12802	MarR_2	0.78
PF08220	HTH_DeoR	0.78
PF11975	Glyco_hydro_4C	0.78
PF00999	Na_H_Exchanger	0.78
PF10041	DUF2277	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	4.65
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.78
COG0434	Membrane biogenesis protein, BtpA/SgcQ family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.78
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	0.78
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.78
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.78
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	63.57 %
Unclassified	root	N/A	36.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	63.57 %
Unclassified	root	N/A	36.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.57 %
Unclassified	root	N/A	36.43 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	55.81 %
Unclassified	root	N/A	36.43 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	51.94 %
Unclassified	root	N/A	36.43 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.76 %
Unclassified	root	N/A	36.43 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	16.28 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	13.18 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.55 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.55 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	16.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.18 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.55 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.78 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Actinomycetospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora	16.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.18 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.55 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.78 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Actinomycetospora succinea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	16.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.18 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.55 %
unclassified Microbacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium	0.78 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	36.43 %
Actinomycetospora succinea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	16.28 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	13.18 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.55 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.78 %
Microbacterium sp. CH12i	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. CH12i	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig30126	Not Available	855	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig15027	Not Available	718	Open in IMG/M
2140918007\|ConsensusfromContig136521	All Organisms → cellular organisms → Bacteria → Terrabacteria group	604	Open in IMG/M
2140918007\|ConsensusfromContig194339	Not Available	748	Open in IMG/M
3300000878\|AL9A1W_1262473	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300002568\|C688J35102_120961169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3233	Open in IMG/M
3300004006\|Ga0055453_10019431	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300004081\|Ga0063454_101233029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	621	Open in IMG/M
3300004153\|Ga0063455_100976291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	610	Open in IMG/M
3300004479\|Ga0062595_100819910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	770	Open in IMG/M
3300004799\|Ga0058863_11951827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1736	Open in IMG/M
3300005327\|Ga0070658_10580364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	971	Open in IMG/M
3300005329\|Ga0070683_100030679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	4883	Open in IMG/M
3300005338\|Ga0068868_100233846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1542	Open in IMG/M
3300005339\|Ga0070660_101029476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	696	Open in IMG/M
3300005366\|Ga0070659_101220994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	665	Open in IMG/M
3300005435\|Ga0070714_100207948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1793	Open in IMG/M
3300005435\|Ga0070714_100250007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1639	Open in IMG/M
3300005435\|Ga0070714_101071727	Not Available	785	Open in IMG/M
3300005436\|Ga0070713_100874400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	864	Open in IMG/M
3300005436\|Ga0070713_101079197	Not Available	776	Open in IMG/M
3300005436\|Ga0070713_101321862	Not Available	699	Open in IMG/M
3300005436\|Ga0070713_101426193	Not Available	672	Open in IMG/M
3300005437\|Ga0070710_10014877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3923	Open in IMG/M
3300005437\|Ga0070710_10125447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1559	Open in IMG/M
3300005437\|Ga0070710_10425702	Not Available	895	Open in IMG/M
3300005439\|Ga0070711_100209826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1507	Open in IMG/M
3300005439\|Ga0070711_100603730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300005466\|Ga0070685_11327621	Not Available	550	Open in IMG/M
3300005535\|Ga0070684_100656066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	977	Open in IMG/M
3300005547\|Ga0070693_101366643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300005549\|Ga0070704_101322402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M
3300005563\|Ga0068855_100487010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1342	Open in IMG/M
3300005578\|Ga0068854_101174583	Not Available	687	Open in IMG/M
3300005614\|Ga0068856_100186827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2086	Open in IMG/M
3300005843\|Ga0068860_101331860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	739	Open in IMG/M
3300006028\|Ga0070717_11872121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. CH12i	542	Open in IMG/M
3300006237\|Ga0097621_101310423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	684	Open in IMG/M
3300006755\|Ga0079222_10798274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300006804\|Ga0079221_11482100	Not Available	544	Open in IMG/M
3300006852\|Ga0075433_10555636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1009	Open in IMG/M
3300006871\|Ga0075434_100375594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1442	Open in IMG/M
3300009093\|Ga0105240_11404666	Not Available	734	Open in IMG/M
3300009098\|Ga0105245_10082408	Not Available	2943	Open in IMG/M
3300009098\|Ga0105245_11352499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	762	Open in IMG/M
3300009148\|Ga0105243_12868979	Not Available	522	Open in IMG/M
3300009162\|Ga0075423_10665084	Not Available	1099	Open in IMG/M
3300009174\|Ga0105241_10082717	Not Available	2517	Open in IMG/M
3300009174\|Ga0105241_10703071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	923	Open in IMG/M
3300009545\|Ga0105237_10738470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	991	Open in IMG/M
3300009545\|Ga0105237_12632939	Not Available	514	Open in IMG/M
3300009551\|Ga0105238_10175824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2117	Open in IMG/M
3300010359\|Ga0126376_10687036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	982	Open in IMG/M
3300010371\|Ga0134125_10070854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3878	Open in IMG/M
3300010371\|Ga0134125_11504674	Not Available	733	Open in IMG/M
3300010373\|Ga0134128_10448355	Not Available	1440	Open in IMG/M
3300010373\|Ga0134128_10628337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	1194	Open in IMG/M
3300010373\|Ga0134128_11742133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	685	Open in IMG/M
3300010396\|Ga0134126_10023501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7826	Open in IMG/M
3300010396\|Ga0134126_10442446	Not Available	1505	Open in IMG/M
3300010396\|Ga0134126_11603585	Not Available	716	Open in IMG/M
3300010396\|Ga0134126_12067606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	622	Open in IMG/M
3300010400\|Ga0134122_13117320	Not Available	518	Open in IMG/M
3300011119\|Ga0105246_10552144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	987	Open in IMG/M
3300011998\|Ga0120114_1044114	Not Available	882	Open in IMG/M
3300012004\|Ga0120134_1001969	All Organisms → cellular organisms → Bacteria	2612	Open in IMG/M
3300012004\|Ga0120134_1041281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	783	Open in IMG/M
3300012019\|Ga0120139_1059424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	920	Open in IMG/M
3300012019\|Ga0120139_1101057	Not Available	724	Open in IMG/M
3300012951\|Ga0164300_10030911	All Organisms → cellular organisms → Bacteria	1964	Open in IMG/M
3300012955\|Ga0164298_10628672	Not Available	742	Open in IMG/M
3300012957\|Ga0164303_10990484	Not Available	597	Open in IMG/M
3300012961\|Ga0164302_10904909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	678	Open in IMG/M
3300012985\|Ga0164308_10998919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	744	Open in IMG/M
3300012987\|Ga0164307_10466619	Not Available	946	Open in IMG/M
3300012988\|Ga0164306_11020001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	683	Open in IMG/M
3300013296\|Ga0157374_11951400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	613	Open in IMG/M
3300013307\|Ga0157372_10616377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	1265	Open in IMG/M
3300013307\|Ga0157372_11215750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300013766\|Ga0120181_1031163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1276	Open in IMG/M
3300013770\|Ga0120123_1022115	Not Available	1287	Open in IMG/M
3300013832\|Ga0120132_1005125	Not Available	2040	Open in IMG/M
3300014052\|Ga0120109_1004785	All Organisms → cellular organisms → Bacteria	3033	Open in IMG/M
3300014054\|Ga0120135_1044838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300014056\|Ga0120125_1091012	Not Available	705	Open in IMG/M
3300014058\|Ga0120149_1197137	Not Available	562	Open in IMG/M
3300014497\|Ga0182008_10396502	Not Available	740	Open in IMG/M
3300014745\|Ga0157377_10875872	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300014823\|Ga0120170_1099319	Not Available	590	Open in IMG/M
3300014829\|Ga0120104_1006223	Not Available	2099	Open in IMG/M
3300014968\|Ga0157379_11100569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	761	Open in IMG/M
3300015372\|Ga0132256_100126863	All Organisms → cellular organisms → Bacteria	2527	Open in IMG/M
3300015373\|Ga0132257_100594180	Not Available	1367	Open in IMG/M
3300019887\|Ga0193729_1146503	All Organisms → cellular organisms → Bacteria → Terrabacteria group	857	Open in IMG/M
3300019890\|Ga0193728_1171847	All Organisms → cellular organisms → Bacteria → Terrabacteria group	934	Open in IMG/M
3300019890\|Ga0193728_1289867	Not Available	629	Open in IMG/M
3300020069\|Ga0197907_10112569	Not Available	508	Open in IMG/M
3300020070\|Ga0206356_11084252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	1088	Open in IMG/M
3300020070\|Ga0206356_11317033	Not Available	534	Open in IMG/M
3300020075\|Ga0206349_1978537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300020076\|Ga0206355_1569257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300020077\|Ga0206351_10226446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300020081\|Ga0206354_10515339	Not Available	548	Open in IMG/M
3300020082\|Ga0206353_11400912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1556	Open in IMG/M
3300020082\|Ga0206353_11921735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300022467\|Ga0224712_10370792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300025464\|Ga0208076_1010861	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300025898\|Ga0207692_10022214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2917	Open in IMG/M
3300025906\|Ga0207699_11414433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	514	Open in IMG/M
3300025911\|Ga0207654_10458042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	895	Open in IMG/M
3300025913\|Ga0207695_10812757	Not Available	815	Open in IMG/M
3300025916\|Ga0207663_10686626	Not Available	810	Open in IMG/M
3300025920\|Ga0207649_11541445	Not Available	526	Open in IMG/M
3300025924\|Ga0207694_10165875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1786	Open in IMG/M
3300025924\|Ga0207694_10800333	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300025926\|Ga0207659_11579935	Not Available	560	Open in IMG/M
3300025928\|Ga0207700_10963918	Not Available	763	Open in IMG/M
3300025929\|Ga0207664_10333734	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300026035\|Ga0207703_11806539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	587	Open in IMG/M
3300026078\|Ga0207702_11030805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	816	Open in IMG/M
3300028381\|Ga0268264_11474275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300028784\|Ga0307282_10529602	All Organisms → cellular organisms → Bacteria → Terrabacteria group	572	Open in IMG/M
3300028828\|Ga0307312_10389686	All Organisms → cellular organisms → Bacteria → Terrabacteria group	914	Open in IMG/M
3300031740\|Ga0307468_101653999	Not Available	600	Open in IMG/M
3300031938\|Ga0308175_100650931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1139	Open in IMG/M
3300031939\|Ga0308174_10462494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinomycetospora → Actinomycetospora succinea	1032	Open in IMG/M
3300031939\|Ga0308174_11083838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300032174\|Ga0307470_11471770	Not Available	565	Open in IMG/M
3300032892\|Ga0335081_12210572	Not Available	579	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.99%
Host-Associated	Host-Associated	31.01%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.22%
Plants	Host-Associated → Plants	30.23%
Aquatic	Environmental → Aquatic	0.78%
Human	Host-Associated → Human	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.98%
Marine	Environmental → Aquatic → Marine	0.78%
Digestive System	Host-Associated → Human → Digestive System	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.29%
Loam	Environmental → Terrestrial → Soil → Loam	20.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.78%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.83%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.83%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	15.50%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.33%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.33%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.55%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.40%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	11.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.30%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	7.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	7.75%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	7.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	3.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.10%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.10%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.33%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.33%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.55%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.55%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300000878	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-5 cm-9A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011998	Permafrost microbial communities from Nunavut, Canada - A30_35cm_6M	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013766	Permafrost microbial communities from Nunavut, Canada - A26_65cm_6M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014054	Permafrost microbial communities from Nunavut, Canada - A34_5cm_12M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_00040450	2124908043	Soil	VILVERSDVSDTPQEAAYRGQVAAYFDAVIHHGEAGDILRNLERAVERLAFVRSCIIPFTLDADGALHQDPYHPIEVISNELNYIGFAPPVVDEGEPDRMDGARS
A5_c1_00340050	2124908044	Soil	VEKSDVSDTPQEAAYRAQMAAYFDAIIHHGEAGDILRNLERAVERLAFVRSCIIPFTLDADGCLHQDPYHPIEVVGDELNYIGFAPPIYDESESENVSGVAG
A_all_C_01667430	2140918007	Soil	MIEVARFCYGRTEETVILVDSEISDTLEEAAYRSQMAAYFDAIIQHGEAGDILRNLERAIERLAFVRACIIPFTVDADGGLHQDPYHAIEVVGNELNYIG
A_all_C_00945530	2140918007	Soil	VRHRQRRVTPVEKSDVSDTPQEAAYRAQMAAYFDAIIHHGEAGDILRNLERAVERLAFVRSCIIPFTLDADGSLHQDPYHPIEVVSDELNYIGFAPPVFDESESENVSGVAG
AL9A1W_12624732	3300000878	Permafrost	MVVENDNVSDTPDEAAYRSQMAAYFDAIIHHGEAGDILRNLERAVERLAFVRACIIPFTVDAEGSLHQDAYHPIEVISNELDYIGFAPAVPEELESSR*
C688J35102_1209611693	3300002568	Soil	LANNLQDTPEEAAYRAQMAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGDLHQDAYHPLEVISNERNYIGFPPPALQEADEAA*
Ga0055453_100194311	3300004006	Natural And Restored Wetlands	MSVRKSEVHDTPEEAAYRAQLAAYFDAIIKHGEAGEILRNLERAVERLAFVRACIIPFTVSADGDLHQDAYHPIEVISNELNYIGFPPPVVFDDESERPIAATG
Ga0063454_1012330292	3300004081	Soil	VADNMHDTPEEGAYRAQVAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPLEVISNELNYIGFAPPALQDADEAA*
Ga0063455_1009762911	3300004153	Soil	MAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGDLHQDAYHPLEVISNERNYIGFPPPALQEADEAA*
Ga0062595_1008199101	3300004479	Soil	VAENVHDAPEEAAYGAQMAADFDAVINQGEAGEILRNHERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0058863_119518271	3300004799	Host-Associated	VAENVHDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0070658_105803642	3300005327	Corn Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTMNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0070683_1000306792	3300005329	Corn Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTTNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0068868_1002338461	3300005338	Miscanthus Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0070660_1010294761	3300005339	Corn Rhizosphere	PIRARPESNEESGFVANNAQDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAGGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0070659_1012209942	3300005366	Corn Rhizosphere	EAAYRAQMAAYFDTVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0070714_1002079484	3300005435	Agricultural Soil	VERRDVSDTPQEAAYRAQVAAYFDAVIHHGEAGDILRNLERAVERLAFVRSCIIPFTVNADGALHQDPYHPIEVISDELNYIGFPAPLLEDVEPGRVSGTLSEH*
Ga0070714_1002500071	3300005435	Agricultural Soil	MFVATREVHDTPEEAAYRAQLAAYFDAIIQQGDAGDILRNLERAVERLAFVRACIIPFTVNADGDLHQDAYHPIEVISNELNYIGFPPPIAEADEAAA*
Ga0070714_1010717272	3300005435	Agricultural Soil	VERGNVSDTRQEAAYRAQMAAYFDAIIHHGEAGEILRNLERAVERLAFVRSCIIPFTVDADGALHQDPYHPIEVIGDELNYIGFPAPFLEDSEPEPVSAAGD*
Ga0070713_1008744001	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MFVATREVHDTPEEAAYRAQLAAYFDAIIQQGDAGDILRNLERAVERLAFVRACIIPFTVNADGDLHQDAYHPIEVISNELNYIGFPAPAVFDDEADRPIAATG*
Ga0070713_1010791971	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VANNMHDTPEEAAYRSQMAAYFDAVIQHGEAGEILRNVERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFP
Ga0070713_1013218622	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DTPEEAAYRSQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAEGDLHQDAYHPIEVIANELNYIGFPPPLAEADEAAA*
Ga0070713_1014261932	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VERSDVSDTPQEAAYRAQVAAYFDAVIHHGEAGDILRNLERAVERLAFVRSCIIPFTVNADGALHQDPYHPIEVISDELNYIGFPAP
Ga0070710_100148775	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VANNMHDTPEEAAYRSQMAAYFDAVIQHGEAGEILRNVERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPIAEADEAAA*
Ga0070710_101254472	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MGKSDVSDTPEEAAYRAQMAAYFDAIIHHGEAGDILRNLERAVERLAFVRACIIPFTVNEDGHLHQDAYHPIEVISNELNYIGFAPEVPAGIEAVG*
Ga0070710_104257022	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VERSDVSDTPQEAAYRAQVAAYFDAVIHHGEAGDILRNLERAVERLAFVRSCIIPFTVNADGALHQDPYHPIEVISDELNYIGFPAPLLEDVEPGRVSGTLSEH*
Ga0070711_1002098264	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	DTPEEAAYRSQMAAYFDAVIQHGEAGEILRNVERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPIAEADEAAA*
Ga0070711_1006037301	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VADNVHDTPEEAAYRSQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAEGDLHQDAYHPIEVIANELNYIGFPPPLAEADEAAA*
Ga0070685_113276211	3300005466	Switchgrass Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGDLHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0070684_1006560662	3300005535	Corn Rhizosphere	VANNAQDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAGGELHQDAYHPIEVISNELNYIGFPPPVEEADEAAA*
Ga0070693_1013666432	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTMNADGELHQDAYHPIEVISNELNYIGF
Ga0070704_1013224022	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTTNADGELHQDAYHPIEVISNELNYIGFPALPEQVDEAAA*
Ga0068855_1004870103	3300005563	Corn Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTLNADGDLHQDAYHPLEVISNELNYIGFAPPPAEEADAAA*
Ga0068854_1011745831	3300005578	Corn Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVVSNELNYIGFPPPLAEADEAAA*
Ga0068856_1001868276	3300005614	Corn Rhizosphere	VVSVADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTMNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0068860_1013318602	3300005843	Switchgrass Rhizosphere	VADNVHDTPEEAAYRAHMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTTNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0070717_118721211	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VADNVHDTPEEAAYRSQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAEGDLHQDAYHPIEVISNELNYIGFPAPVFDDEADRPIAATG*
Ga0097621_1013104232	3300006237	Miscanthus Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVVSNELNYIGFPPPLADADEAAA*
Ga0079222_107982742	3300006755	Agricultural Soil	VANNPQDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAGGELHQDAYHPIEVISNELNYIGFPPPVEEADEAAA*
Ga0079221_114821001	3300006804	Agricultural Soil	PRTRPESNEESGFVANNAQDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAGGELHQDAYHPIEVISNELNYIGFPPPVEEADEAAA*
Ga0075433_105556361	3300006852	Populus Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTMNADGELHQDAYHPIEVISNELNYIGFPPPIAEADEAAA*
Ga0075434_1003755941	3300006871	Populus Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNVERAVERLAFVRACIIPFTVNAEGDLHQDAYYPIEVISNELNYIGFPPPIAEADEAAA*
Ga0105240_114046662	3300009093	Corn Rhizosphere	VRLESNEESGFVANNAQDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAGGELHQDAYHPIEVISNELNYIGFPPPVEEADEAAA*
Ga0105245_100824082	3300009098	Miscanthus Rhizosphere	VVSVADNVHDTPEEAAYRAQMAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVVSNELNYIGFPPPLAEADEAAA*
Ga0105245_113524991	3300009098	Miscanthus Rhizosphere	MHDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTMNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0105243_128689791	3300009148	Miscanthus Rhizosphere	VVSVADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGDLHQDAYHPIEVISNELNYIGFPPPLADADEAAA*
Ga0075423_106650841	3300009162	Populus Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNVERAVERLAFVRACIIPFTVNAEGDLHQDAYYPIEVISNELNYIGFPPPIAEA
Ga0105241_100827173	3300009174	Corn Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPLADADEAAA*
Ga0105241_107030713	3300009174	Corn Rhizosphere	VAENVHDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPLAEAD
Ga0105237_107384703	3300009545	Corn Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTMNADGELHQDAYHPIEVISNELNYIGFPPPVEEADEAAA*
Ga0105237_126329391	3300009545	Corn Rhizosphere	LQDARVAGPSDDRDRIGAHGSPAPIRARPESNEESGFVANNAQDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAGGELHQDAYHPIEVVSNELNYIGFPPPLAEADEAAA*
Ga0105238_101758243	3300009551	Corn Rhizosphere	VVSVADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTTNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0126376_106870362	3300010359	Tropical Forest Soil	VVSVADNVHDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNAEGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0134125_100708543	3300010371	Terrestrial Soil	VVSVAENVHDTPEEAAYRSQMAAYFDAVIHNGEAGEILRNLERAIERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPLAEAGEAAA*
Ga0134125_115046742	3300010371	Terrestrial Soil	VVSVADYVQDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNAEGDLHQDAYHPIEVISNELNYIGFPPPIADADEAAA*
Ga0134128_104483551	3300010373	Terrestrial Soil	VADNVHDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTLNADGDLHQDAYHPLEEISNELN
Ga0134128_106283372	3300010373	Terrestrial Soil	VVSVADNMHDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGDLHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0134128_117421332	3300010373	Terrestrial Soil	LQDARVAGPSDDRDRIGAHGSPAPIRARPESNEESGFVANNAQDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNADGELHQAAYHPIEVISNELNYIGFPPPLAEAGEAAA*
Ga0134126_100235013	3300010396	Terrestrial Soil	VADYVQDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNAEGDLHQDAYHPIEVISNELNYIGFPPPIADADEAAA*
Ga0134126_104424461	3300010396	Terrestrial Soil	VVSVADNVHDTPEEAAYRAQMAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0134126_116035852	3300010396	Terrestrial Soil	LQDARVAGASDDRDRIGAHGSPAPIRARPESNEESGFVANNAQDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAGGELHQDAYHPIEVISNELNYIGFPPPVEEADEAAA*
Ga0134126_120676061	3300010396	Terrestrial Soil	EEAAYRSQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGDLHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0134122_131173201	3300010400	Terrestrial Soil	MHDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGDLHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0105246_105521442	3300011119	Miscanthus Rhizosphere	MHDTPEEAAYRSQMAAYFDAVIQHGEAGEILRNVERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPIAEADEAAA*
Ga0120114_10441142	3300011998	Permafrost	MIGVARFVMGRQRRVMVVENDNVSDTPDEAAYRSQMAAYFDAIIHHGEAGDILRNLERAVERLAFVRACIIPFTVDADGGLHQDAYHPIEVISNELNYIGFAPAVPEELESAR*
Ga0120134_10019694	3300012004	Permafrost	MIEVATFCYGQTEETVMDVDNSDFADTAEEAAYRSQMAAYFDAVIQHSEAGDILRNLERAIERLAFVRACIIPFTVDADGGLHQDAYHP
Ga0120134_10412812	3300012004	Permafrost	MIGVARFVMGRQRRVMVVENDNVSDTPDEAAYRSQMAAYFDAIIHHGEAGDILRNLERAVERLAFVRACIIPFTVDAEGSLHQDAYHPIEVISNELDYIGFAPAVPEELESAR*
Ga0120139_10594241	3300012019	Permafrost	MIEVATLCYGQTEETVMDVDNGDSADTAEEAAYRSQMAAYFDAVIQHSEAGDILRNLERAIERLAFVRACIIPFTVDADGGLHQDAYHPIEVISNELNYIGFAPAVPEELESAR*
Ga0120139_11010571	3300012019	Permafrost	FVMGRQRRVMVVENDNVSDTPDEAAYRSQMAAYFDAIIHHGEAGDILRNLERAVERLAFVRACIIPFTVDAEGSLHQDAYHPIEVISNELDYIGFAPAVPEELESSR*
Ga0164300_100309114	3300012951	Soil	VVSVANNMHDTPEEAAYRSQMAAYFDAVIQHGEAGEILRNVERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPIAEADEAAA*
Ga0164298_106286722	3300012955	Soil	MHPMGNSDVSDTPEEAAYRAQMAAYFDAIIHHGEAGDILRNLERAVERLAFVRACIIPFTVNEDGRLHQDAYHPIEVISNELNYIGFAPEIPAGIEAVG*
Ga0164303_109904842	3300012957	Soil	RTTRKRRTPSSAPIRARLESNEESGSVANNLHDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPIAEADEAAA*
Ga0164302_109049092	3300012961	Soil	AAYFDAVIQHGEAGEILRNVERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPIAEADEAAA*
Ga0164308_109989191	3300012985	Soil	LVGRIGTATAHPSPAPSGRASSRTRRVVSVANNMHDTPEEAAYRSQMAAYFDAVIQHGEAGEILRNVERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPIAEADEAAA*
Ga0164307_104666193	3300012987	Soil	MHDTPEEAAYRSQMAAYFDAVIQHGEAGEILRNVERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGF
Ga0164306_110200012	3300012988	Soil	GRASSRTRRVVSVAENVHDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPIAEADEAAA*
Ga0157374_119514001	3300013296	Miscanthus Rhizosphere	TPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTMNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0157372_106163773	3300013307	Corn Rhizosphere	VVSVADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTTNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAAQPATQVASRG*
Ga0157372_112157502	3300013307	Corn Rhizosphere	VANNAQDTPEEAAYRAQMAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTLNADGDLHQDAYHPLEVISNELNYIGFAPPP
Ga0120181_10311632	3300013766	Permafrost	MIEVATLCYGQTEETVVDVDNRDSADTAEEAAYRSQMAAYFDAVIRHSEAGDILRNLERAIERLAFVRACIIPFTVDAEGGLHQDAYHPIEVISNELNYIGFAPAVPEELESAR*
Ga0120123_10221153	3300013770	Permafrost	MIEVATLCYGQTEETVMDVDNGDSADTAEEAAYRSQMAAYFDAVIQHSEAGDILRNLERAIERLAFVRACIIPFTVDADGRLHQDAYHPIEVISNELNYIGFAPAVPEELESAR*
Ga0120132_10051253	3300013832	Permafrost	MIEVATFCYGQTEETVMDVDNGDFADTAEEAAYRSQMAAYFDAVIQHSEAGDILRNLERAIERLAFVRACIIPFTVDADGGLHQDTYHPIEVISNELNYIGFAPAVPEELESAR*
Ga0120109_10047854	3300014052	Permafrost	MIEVATLCYGQTEETVVDVDNRDSADTAEEAAYRSQMAAYFDAVIQHSEAGDILRNLERAIERLAFVRACIIPFTVDADGGLHQDAYHPIEVISNELNYIG
Ga0120135_10448381	3300014054	Permafrost	MIEVATFCYGQTEETVMDVDNSDFADTVEEAAYRSQMAAYFDAIIHHGEAGDILRNLERAVERLAFVRACIIPFTVDADGGLHQDTYHPIEVISNELNYIGFAPAVPEELESAR*
Ga0120125_10910122	3300014056	Permafrost	MIEVATLCYGQTKETVMDVDNGDSADTAEEAAYRSQMAAYFDAVIQHGEAGDILRNLERAIERLAFVRACIIPFTVDADGGLHQDAYHPIEVISNELNYIGFAPAVPEELESAR*
Ga0120149_11971372	3300014058	Permafrost	MRTEETVMYVDNSDSADTREEAAYRSQMAAYFDAVIQHGEAGDILRNLERAIERLAFVRACIIPFTVDADGGLHQDAYHAIEVISNELNYIGFAPAVPDELESAR*
Ga0182008_103965023	3300014497	Rhizosphere	VANNEQDTLEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTLNADGDLHQDAYHPLEVISNELNYIGFAPPPAEEADEAA*
Ga0157377_108758723	3300014745	Miscanthus Rhizosphere	DNVHDTPEEAAYRAQMAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVVSNELNYIGFPPPLAEADEAAA*
Ga0120170_10993192	3300014823	Permafrost	MIEVATLCYGQTEETVVDVDNRDSADTAEEAAYRSQMAAYFDAVIRHSEAGDILRNLERAIERLAFVRACIIPFTVDADGGLHQDAYHPIEVISNELNYIGFAPAVPEELESAR*
Ga0120104_10062232	3300014829	Permafrost	MIEVATLCYGQTEETVMDVDNSDFADTAEEAAYRSQMAAYFDAVIQHSEAGDILRNLERAIERLAFVRACIIPFTVDADGGLHQDAYHPIEVISNELNYIGFAPAVPEELESAR*
Ga0157379_111005691	3300014968	Switchgrass Rhizosphere	MHDTPEEAAYRSQMAAYFDAVINQGEAGEILRNLERAIERLAFVRACIIPFTTNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0132256_1001268633	3300015372	Arabidopsis Rhizosphere	MHDTPEEAAYRSQMAAYFDAVINQGEAGEILRNLERAVERLAFVRACIIPFTVNADGDLHQDAYHPIEVISNELNYIGFPPPLAEADEAAA*
Ga0132257_1005941803	3300015373	Arabidopsis Rhizosphere	MHDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGDLHQDAYHPIEVISNELNYIGFPPPLAE
Ga0193729_11465031	3300019887	Soil	DVSDTPQEAAYRAQVAAYFDAVIHHGEAGDILRNLERAIERLAFVRSCIIPFTLNADGSLHQDPYHPIEVISDELNYVGFAPPLIDESEPERVNGVRS
Ga0193728_11718472	3300019890	Soil	VERNDVSDTPQEAAYRAQVAAYFDAVIHHGEAGDILRNLERAIERLAFVRSCIIPFTLNADGSLHQDPYHPIEVISDELNYVGFAPPLIDESEPERVNGVRS
Ga0193728_12898672	3300019890	Soil	MDVDNSDFADTAEEAAYRSQMAAYFDAVIQHSEAGDILRNLERAIERLAFVRACIIPFTVDADGGLHQDAYHPIEVISNELNYIGFAPAVPEELESAR
Ga0197907_101125691	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	VAENVHDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA
Ga0206356_110842522	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTMNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA
Ga0206356_113170331	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VANNAQDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAGGELHQDAYHPIEVISNELNYIGFPPPVEEADEAAA
Ga0206349_19785371	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA
Ga0206355_15692572	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	VAENVHDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERALERLAFVRACIIPFTVNADGELHQDAYHPIEVISNE
Ga0206351_102264462	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPVEEADEAAA
Ga0206354_105153391	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTTNADGELHQDAYHPIEVVSNELNYIGFPPPLAEADEAAA
Ga0206353_114009122	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTTNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA
Ga0206353_119217351	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VANNAQDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAGGELHQDAYHPIEVISNELNYI
Ga0224712_103707922	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	VANNPHDTPEEAAYRAQTAAYFAALINHGDAGDILRNLERAVERLAFVRACIIPFTVNAGGELHQDAYHPIEVISNELNYIGFPPPAEEAGEAA
Ga0208076_10108611	3300025464	Arctic Peat Soil	VEKSDVLDTAEEAAYRAQVAAYFEAIIQHGEAGDILRNLERAVERLAFVRACIIPFTLTDDGGLHEDPYHAIEVIGNELNYIGFAPVTDDELPRIRAV
Ga0207692_100222143	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VANNMHDTPEEAAYRSQMAAYFDAVIQHGEAGEILRNVERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPIAEADEAAA
Ga0207699_114144332	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	AYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA
Ga0207654_104580423	3300025911	Corn Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDTVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPLAEAGE
Ga0207695_108127571	3300025913	Corn Rhizosphere	RVASPSDDRDRTGACESPAPIRVRLESNEESGFVANNAQDTPEEAAYRAQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAGGELHQDAYHPIEVISNELNYIGFPPPVEEADEAAA
Ga0207663_106866261	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VANNMHDTPEEAAYRSQMAAYFDAVIQHGEAGEILRNVERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPPPIAE
Ga0207649_115414451	3300025920	Corn Rhizosphere	MAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTLNADGDLHQDAYHPLEVISNELNYIGFAPPPAEEADEAA
Ga0207694_101658753	3300025924	Corn Rhizosphere	VHDTPEEAAYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTTNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA
Ga0207694_108003331	3300025924	Corn Rhizosphere	DNVHDTPEEAAYRAQMAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTVSADGELHQDAYHPIEVVSNELNYIGFPPPLAEADEAAA
Ga0207659_115799351	3300025926	Miscanthus Rhizosphere	VADNVHDTPEEAAYRAQMAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVVSNELNYIGFPPPLAEADEAAA
Ga0207700_109639182	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VANNMHDTPEEAAYRSQMAAYFDAVIHHGDAGDILRNLERAVERLAFVRACIIPFTVNAEGDLHQDAYHPIEVIANELNYIGFPPPLAEADEAAA
Ga0207664_103337343	3300025929	Agricultural Soil	TREVHDTPEEAAYRAQLAAYFDAIIQQGDAGDILRNLERAVERLAFVRACIIPFTVNADGDLHQDAYHPIEVISNELNYIGFPPPIAEADEAAA
Ga0207703_118065391	3300026035	Switchgrass Rhizosphere	YRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTMNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA
Ga0207702_110308052	3300026078	Corn Rhizosphere	AYRAQMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTMNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA
Ga0268264_114742752	3300028381	Switchgrass Rhizosphere	VADNVHDTPEEAAYRAHMAAYFDAVINHGEAGEILRNLERAIERLAFVRACIIPFTTNADGELHQDAYHPIEVISNELNYIGFPPPLAEADEAAA
Ga0307282_105296021	3300028784	Soil	CMYCRMLGLRDRRTTRKRRTPSSAPIRARLESNEESGSVANNLHDTPEEAAYRSQMAAYFDAVIHHGEAADILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPAPPQEADEAAA
Ga0307312_103896862	3300028828	Soil	VANNLHDTPEEAAYRSQMAAYFDAVIHHGEAADILRNLERAVERLAFVRACIIPFTVNADGELHQDAYHPIEVISNELNYIGFPAPPQEADEAAA
Ga0307468_1016539991	3300031740	Hardwood Forest Soil	VADNVHDAPEEAAYRSQMAAYFDAVINHGEAGDILRNVERAVERLAFVRACIIPFTVNGDGDLHQDAYHPIEVISNELNYIGFPPPVAEADEAAA
Ga0308175_1006509312	3300031938	Soil	LANNLQDTPEEAAYRAQMAAYFDAVIHHGEAGDILRNLERAVERLAFVRACIIPFTVNADGDLHQDAYHPLEVISNELNYIGFPPPALQEADEAA
Ga0308174_104624942	3300031939	Soil	VADYVQDTPEEAAYRSQMAAYFDAVINHGEAGEILRNLERAVERLAFVRACIIPFTVNAEGDLHQDAYHPIEVISNELNYIGFPPPIADADEAAA
Ga0308174_110838381	3300031939	Soil	VANNPHDTPEEAAYRAQTAAYFAALINHGDAGDILRNLERAVERLAFVRACIIPFTVNAGGELHQDAYHPIEVISNELNYIGFPPPAEEAGEAAA
Ga0307470_114717701	3300032174	Hardwood Forest Soil	VADNVHDAPEEAAYRSQMAAYFDAVINHGEAGDILRNVERAVERLAFVRACIIPFTVNGDGDLHQDAYHPIEVISNELNYIGFPPPIAEADEAAA
Ga0335081_122105721	3300032892	Soil	MSVAKSELNDTPEEAAYRAQLAAYFDAIIQHGEAGEILRNVERAVERLAFVRACIIPFTVNPDGDLHQDAYHPIEVISNELNYIGFPPPVALDEPMAATG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063784

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences