NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F063900

Metagenome / Metatranscriptome Family F063900

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F063900
Family Type Metagenome / Metatranscriptome
Number of Sequences 129
Average Sequence Length 80 residues
Representative Sequence MATKRKICFTGPMRTTVAEDMLRDAGCELVLGKPQDDFRTFRYERKELVNLIGDCPIVYPSGRDIIGADILDSCPDLQ
Number of Associated Samples 120
Number of Associated Scaffolds 129

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 88.19 %
% of genes near scaffold ends (potentially truncated) 96.12 %
% of genes from short scaffolds (< 2000 bps) 88.37 %
Associated GOLD sequencing projects 119
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.450 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(6.977 % of family members)
Environment Ontology (ENVO) Unclassified
(35.659 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(32.558 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.30%    β-sheet: 10.38%    Coil/Unstructured: 61.32%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 129 Family Scaffolds
PF04909Amidohydro_2 79.84
PF135322OG-FeII_Oxy_2 1.55
PF14597Lactamase_B_5 1.55
PF04375HemX 0.78
PF09084NMT1 0.78
PF04392ABC_sub_bind 0.78
PF13343SBP_bac_6 0.78
PF09587PGA_cap 0.78
PF06463Mob_synth_C 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 129 Family Scaffolds
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.78
COG2896GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)Coenzyme transport and metabolism [H] 0.78
COG2959Proteobacterial HemX domain, involved in 2-ketogluconate production (unrelated to B. subtilis HemX, COG0755, no evidence of involvement in heme biosynthesis)General function prediction only [R] 0.78
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.78
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.78

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.45 %
UnclassifiedrootN/A1.55 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000580|AF_2010_repII_A01DRAFT_1002077All Organisms → cellular organisms → Bacteria3203Open in IMG/M
3300000655|AF_2010_repII_A100DRAFT_1004912All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2541Open in IMG/M
3300000837|AP72_2010_repI_A100DRAFT_1028467All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300000890|JGI11643J12802_10120870All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300004050|Ga0055491_10138986All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium629Open in IMG/M
3300004052|Ga0055490_10103289All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300004157|Ga0062590_102572989All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300004480|Ga0062592_100640627All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300005181|Ga0066678_10957398All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium557Open in IMG/M
3300005186|Ga0066676_10119312All Organisms → cellular organisms → Bacteria1624Open in IMG/M
3300005294|Ga0065705_10075436All Organisms → cellular organisms → Bacteria1177Open in IMG/M
3300005335|Ga0070666_10127812All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1764Open in IMG/M
3300005344|Ga0070661_101600298All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium551Open in IMG/M
3300005455|Ga0070663_102069882All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium513Open in IMG/M
3300005549|Ga0070704_100790971All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300005830|Ga0074473_10102377All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300005981|Ga0081538_10297654All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300006175|Ga0070712_101472158All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300006224|Ga0079037_100328790All Organisms → cellular organisms → Bacteria1427Open in IMG/M
3300006358|Ga0068871_101294815All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300006852|Ga0075433_10254880All Organisms → cellular organisms → Bacteria1556Open in IMG/M
3300006852|Ga0075433_11781246All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium529Open in IMG/M
3300006853|Ga0075420_100699714All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium874Open in IMG/M
3300006871|Ga0075434_102247256All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium549Open in IMG/M
3300006904|Ga0075424_102771702All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300007076|Ga0075435_101799963All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300009012|Ga0066710_103239975All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium624Open in IMG/M
3300009087|Ga0105107_11191110All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300009091|Ga0102851_11651302All Organisms → cellular organisms → Bacteria718Open in IMG/M
3300009156|Ga0111538_11389901All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300009162|Ga0075423_12410397All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300010047|Ga0126382_10956622All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium746Open in IMG/M
3300010359|Ga0126376_11590537All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300010360|Ga0126372_10223528All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1590Open in IMG/M
3300010401|Ga0134121_12998675All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium519Open in IMG/M
3300010403|Ga0134123_11508151All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium717Open in IMG/M
3300010403|Ga0134123_12143774All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300011332|Ga0126317_10935394All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300011409|Ga0137323_1056994All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium859Open in IMG/M
3300011417|Ga0137326_1031519All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1136Open in IMG/M
3300011429|Ga0137455_1048508All Organisms → cellular organisms → Bacteria1196Open in IMG/M
3300012034|Ga0137453_1020998All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1037Open in IMG/M
3300012173|Ga0137327_1051801All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium900Open in IMG/M
3300012173|Ga0137327_1067716All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium790Open in IMG/M
3300012351|Ga0137386_10719447All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300012354|Ga0137366_10545935All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300012354|Ga0137366_10993390All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300012362|Ga0137361_10242939All Organisms → cellular organisms → Bacteria1639Open in IMG/M
3300012582|Ga0137358_10192943All Organisms → cellular organisms → Bacteria1390Open in IMG/M
3300012922|Ga0137394_10929789All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium725Open in IMG/M
3300012929|Ga0137404_10077448All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2628Open in IMG/M
3300012930|Ga0137407_10029210All Organisms → cellular organisms → Bacteria4274Open in IMG/M
3300012948|Ga0126375_11249728All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium621Open in IMG/M
3300012987|Ga0164307_11186661All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300014300|Ga0075321_1007950All Organisms → cellular organisms → Bacteria1450Open in IMG/M
3300014312|Ga0075345_1173396All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300014326|Ga0157380_12164448All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium620Open in IMG/M
3300014968|Ga0157379_11206812All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium728Open in IMG/M
3300015241|Ga0137418_10370511All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1176Open in IMG/M
3300015257|Ga0180067_1143830All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium544Open in IMG/M
3300015372|Ga0132256_101591520All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium763Open in IMG/M
3300015372|Ga0132256_102439368All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium625Open in IMG/M
3300015373|Ga0132257_101725736All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300015373|Ga0132257_103816810All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium548Open in IMG/M
3300017659|Ga0134083_10194442All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium835Open in IMG/M
3300018056|Ga0184623_10158662All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1045Open in IMG/M
3300018063|Ga0184637_10408775All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300018068|Ga0184636_1306937All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium558Open in IMG/M
3300018076|Ga0184609_10270319All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium795Open in IMG/M
3300018082|Ga0184639_10116000All Organisms → cellular organisms → Bacteria1418Open in IMG/M
3300020066|Ga0180108_1164250All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300020083|Ga0194111_10845748All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium548Open in IMG/M
3300020195|Ga0163150_10527166All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium515Open in IMG/M
3300020215|Ga0196963_10260572All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium759Open in IMG/M
3300021078|Ga0210381_10378627All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium521Open in IMG/M
3300021082|Ga0210380_10034734All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2163Open in IMG/M
3300021090|Ga0210377_10639205All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium594Open in IMG/M
3300021432|Ga0210384_11755822All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300025174|Ga0209324_10303051All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300025289|Ga0209002_10438035All Organisms → cellular organisms → Bacteria735Open in IMG/M
3300025312|Ga0209321_10118883All Organisms → cellular organisms → Bacteria1443Open in IMG/M
3300025312|Ga0209321_10555466All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium505Open in IMG/M
3300025314|Ga0209323_10176229All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1409Open in IMG/M
3300025319|Ga0209520_10323875All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium940Open in IMG/M
3300025324|Ga0209640_10431588All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1083Open in IMG/M
3300025324|Ga0209640_11188371All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium574Open in IMG/M
3300025326|Ga0209342_11110807All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium592Open in IMG/M
3300025792|Ga0210143_1025017All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300025893|Ga0207682_10288257All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium768Open in IMG/M
3300025917|Ga0207660_11591685All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300025931|Ga0207644_10085768All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2336Open in IMG/M
3300025935|Ga0207709_10153968All Organisms → cellular organisms → Bacteria1596Open in IMG/M
3300025936|Ga0207670_10235503All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1408Open in IMG/M
3300025942|Ga0207689_10027079All Organisms → cellular organisms → Bacteria4799Open in IMG/M
3300025972|Ga0207668_10816597All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300026088|Ga0207641_10934090All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium862Open in IMG/M
3300026324|Ga0209470_1163883All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium970Open in IMG/M
3300027056|Ga0209879_1030224All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium899Open in IMG/M
3300027511|Ga0209843_1094659All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300027725|Ga0209178_1029735All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1716Open in IMG/M
3300027787|Ga0209074_10004464All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3143Open in IMG/M
3300027815|Ga0209726_10022097All Organisms → cellular organisms → Bacteria → Proteobacteria5351Open in IMG/M
3300027819|Ga0209514_10206918All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium978Open in IMG/M
3300027840|Ga0209683_10223016All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium866Open in IMG/M
3300027876|Ga0209974_10006983All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3909Open in IMG/M
(restricted) 3300028043|Ga0233417_10277334All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium753Open in IMG/M
3300028814|Ga0307302_10257570All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium855Open in IMG/M
3300030006|Ga0299907_10106249All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2304Open in IMG/M
3300031229|Ga0299913_10843643All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium888Open in IMG/M
3300031421|Ga0308194_10356689All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300031820|Ga0307473_11162921All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300031858|Ga0310892_10286919All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300031944|Ga0310884_11082402All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium501Open in IMG/M
3300032174|Ga0307470_10883344All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300032180|Ga0307471_100112874All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2507Open in IMG/M
3300032180|Ga0307471_102299724All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium680Open in IMG/M
3300032421|Ga0310812_10013315All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2784Open in IMG/M
3300032829|Ga0335070_11489697All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300032893|Ga0335069_10485627All Organisms → cellular organisms → Bacteria1435Open in IMG/M
3300033433|Ga0326726_10728832All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300033482|Ga0316627_101454726All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium691Open in IMG/M
3300033557|Ga0316617_100444839All Organisms → cellular organisms → Bacteria1159Open in IMG/M
3300034115|Ga0364945_0029873All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1461Open in IMG/M
3300034165|Ga0364942_0139806All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300034178|Ga0364934_0057245All Organisms → cellular organisms → Bacteria1445Open in IMG/M
3300034354|Ga0364943_0209123All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium719Open in IMG/M
3300034668|Ga0314793_059375All Organisms → cellular organisms → Bacteria721Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.98%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere6.20%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil5.43%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.65%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment3.10%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.10%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.10%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.10%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.10%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment3.10%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.88%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.33%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.33%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil2.33%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil2.33%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.33%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.33%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.55%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater1.55%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.55%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.55%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.55%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.55%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.55%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.55%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.55%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.55%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.78%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.78%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat0.78%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.78%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment0.78%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.78%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.78%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.78%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.78%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.78%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.78%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.78%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.78%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.78%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.78%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000580Forest soil microbial communities from Amazon forest - 2010 replicate II A01EnvironmentalOpen in IMG/M
3300000655Forest soil microbial communities from Amazon forest - 2010 replicate II A100EnvironmentalOpen in IMG/M
3300000837Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100EnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300004050Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D2EnvironmentalOpen in IMG/M
3300004052Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005830Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBMEnvironmentalOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011409Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2EnvironmentalOpen in IMG/M
3300011417Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT500_2EnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300012034Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2EnvironmentalOpen in IMG/M
3300012173Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2EnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300014300Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1EnvironmentalOpen in IMG/M
3300014312Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015257Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_10DEnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017659Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018068Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b2EnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300020066Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT45_16_1Ra (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020083Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015033 Kigoma Deep Cast 300mEnvironmentalOpen in IMG/M
3300020195Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IBEnvironmentalOpen in IMG/M
3300020215Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300021090Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_b1 redoEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300025174Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3EnvironmentalOpen in IMG/M
3300025289Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 2EnvironmentalOpen in IMG/M
3300025312Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4EnvironmentalOpen in IMG/M
3300025314Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2EnvironmentalOpen in IMG/M
3300025319Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025326Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025792Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300027056Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027511Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027815Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)EnvironmentalOpen in IMG/M
3300027819Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW37 contaminated, 5.8 m (SPAdes)EnvironmentalOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300028043 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MGEnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032421Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300034115Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17EnvironmentalOpen in IMG/M
3300034165Sediment microbial communities from East River floodplain, Colorado, United States - 19_s17EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M
3300034668Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
AF_2010_repII_A01DRAFT_100207713300000580Forest SoilMDAKRKVCVTGPMRVKIAENILRGAGCELVLGKPQDDFRTFRYERKELIQLIDDCPIVYPSGRDVIGGE
AF_2010_repII_A100DRAFT_100491213300000655Forest SoilMDAKRKVCVTGPMRVKIAENILRGAGCELVLGKPQDDFRTFRYERKELIQLIDDCPIVYPSGRDVIGGEILDSCPEL
AP72_2010_repI_A100DRAFT_102846713300000837Forest SoilMDAKRKVCVTGPMRVKIAENILRGAGCELVLGKPQDDFRTFRYERKELIQLIDDCPIVYPSGRDVIGG
JGI11643J12802_1012087023300000890SoilMATRRKVCFTGPTRLKVAEEILRGAGCELVLGKNQDDFREYKYPRRELVELIGDSAVVFPSGRDIVGGEILDSCANLQA
Ga0055491_1013898613300004050Natural And Restored WetlandsMAIKRKVCLTGPTGLKIAEDGLRRAGCELVLGKPLDDFREFRYERKDLVNLIGDCPIVFPAGRDFIGADILDSCPELQAVVKSSIGIE
Ga0055490_1010328923300004052Natural And Restored WetlandsMGAKRKVCFTGPMQVTIAEDILRRAGCELVLGKPQDDFRTFRYERKELIQLIGDCPIVYPSGRDVIGGD
Ga0062590_10257298923300004157SoilMATRRKVCFTGPTRLKVAEEILRGAGCELVLGKNQDDFREYKYPRRELVELIGDSAVVFPSGRDIVGGEILDSCANLQAVVKS
Ga0062592_10064062713300004480SoilMAIKRKICLTGPMRITIVEDTLRNAGCELVMGKPQDDFRTFRYARKDLIDLIGDCSIVYPSGRDMIGADILDSC
Ga0066678_1095739813300005181SoilLIMPSKRKVCFTGPTRLKLAEDLLRAANCELVLGKSVDDFRSYRYEKRELINLIGDSDVLFPAGREFIGGDILDSCANLQA
Ga0066676_1011931213300005186SoilMATKRKICFTGPMRTMVAEDILRDAGCELVLGKPQDDFRTFRYERKELVNLIGDCPIVYPSGRDIIG
Ga0065705_1007543623300005294Switchgrass RhizosphereMSIKRKICFTGPMRIKIAEEALRSAGCELVMGKPQDDFRTFRYERKNLINLIGDCSIVYPSGRDTIGADILDSC
Ga0070666_1012781233300005335Switchgrass RhizosphereMAPKRKICVTGPMRIKLAEKMLRDEGCELVLGKPQDDFREFRYERKDLVGLIGDSSIVYPSGRDMIGGDILDSCPDVQAVVKSSIGIETVDV
Ga0070661_10160029813300005344Corn RhizosphereMAAKRKICVTGPMRIKIAEKMLRDAGCELVLGKPQDDFREFRYERKDLVALIGDSSIVYPSGRDMIGGDILDSCPDLQAVV
Ga0070663_10206988213300005455Corn RhizosphereMAAKRKICVTGPMRIKIAEKMLRDAGCELVLGKPQDDFREFRYERKDLVALIGDSSIVYPSGRDMIGGDILDSCPDLQAVVKSS
Ga0070704_10079097123300005549Corn, Switchgrass And Miscanthus RhizosphereMSIKRKICFTGPMRIKIAEEALRSAGCELVMGKPQDDFRTFRYERKDLLNLIGDCSIVYPSGRDMIGADILDSCP
Ga0074473_1010237713300005830Sediment (Intertidal)MGAKRKVCMTGPTGLTVVADALRQAGCELVLGKPLDDFREFRYERKDLVKLIGDAPIVFPAGRDFIGAD
Ga0081538_1029765423300005981Tabebuia Heterophylla RhizosphereMGAKRKVCLTGPMGIKIAENILRGAGCELVLGKPQDDFRTFRYERKELVQLIGDCPVVYPSGRDVIGADILDSCPDLQAVVKSSIG
Ga0070712_10147215813300006175Corn, Switchgrass And Miscanthus RhizosphereMGAKRKVCLTGPMRIKLAEEILRGAGCELVLGKPQDDFRTFRYERKELVNLIGDCPIVYPSGRDVITGEILDSCPDLQAVV
Ga0079037_10032879023300006224Freshwater WetlandsMVSNRKVCFTGPTRLTLAEDMLRNAGCELVMGKNADEFRTFRYERRELIHLIGDAPVVFPSGRDIIGADILDSCANLQAVVKSSIGI*
Ga0068871_10129481523300006358Miscanthus RhizosphereMAAKRKVCVTGPMRIKIVENALRDAGCELVLGKPQDDFRNFRYERKELINLVGDSSIIYPSGRDFIGGDV
Ga0075433_1025488033300006852Populus RhizosphereMATKRKICFTGPMRTTVAEDILRDAGCELVLGKPQDDFRTFRYERKELVNLIGDCPIVYPSGRDIIGADILDSCPDL
Ga0075433_1178124623300006852Populus RhizosphereMATKRKICFTGPMRTTVAEDILRDAGCELVLGKPQDDFRTFRYVRKELVNLIGDCPIVYPSGRDIIGADILDSCPDLQAV
Ga0075420_10069971423300006853Populus RhizosphereMGAKRKVCFTGPMRVTIAEDILRRAGCELVMGKPQDDFRTFCYERKELVQLIGDCPIVYPSGRDVIGGEILDSCPDLQAVVKSSIGIET
Ga0075434_10224725613300006871Populus RhizosphereMALKRRVCLTGPTKLKLAENMLREANCELVSGKSIDDFRSYRYEKRELIHLIGDCEVLFPSGREFIGGDILDSCANLQAVVKSSIGIENVDVE
Ga0075424_10277170223300006904Populus RhizosphereMATKRKICFTGPMRTTVAEDILRDAGCELVLGKPQDDFRTFRYERKELVNLIGDCPIVYPSGRDIIGADILDSCPDLQAVVKSSIGIETVDV
Ga0075435_10179996313300007076Populus RhizosphereMAAKRKICVTGPMRIKLAETILRDADCELVLGKPQDDFREFRYERKDLVALIGDCSIVYPSGRDMIGGDIL
Ga0066710_10323997513300009012Grasslands SoilMAAKRKICFTGPMRVNVAEQILRDAGCELVLGKPQDDFRNFRYERKDLVNLVGDCPIIYPSGRDVINAEILDSCPDLQAVVKSSIGIETVDV
Ga0105107_1119111013300009087Freshwater SedimentMAVQGKVCFTGPSRLRVAEEALRGAGCELVLGKSQDEFPEFRYERKELIDLIGDCDIVYPAGRDYIGGDILDSCPNLRAVVKSSI
Ga0102851_1165130213300009091Freshwater WetlandsMVSNRKVCFTGPTRLTLAEDMLRNAGCELVMGKNADEFRTFRYERRELINLIGDTPVVFPSGRDIIGADILD
Ga0111538_1138990113300009156Populus RhizosphereMGAKRKVCFTGPMRVKIAEDILRSAGCELVLGKPQDDFRTFRYERKELVQLIGDCPIVYPSGRDVIGGEILDSCPDLQAVVKSSI
Ga0075423_1241039713300009162Populus RhizosphereMRIKLAETILRDADCELVLGKPQDDFREFRYERKDLVALIGDSSIVYPSGRDMIGGDILD
Ga0126382_1095662223300010047Tropical Forest SoilMAAKRKICITGPSGIKIAENTLRQAGCELVLGKPLDEFRDFHYERKQLLDLIGDAPILFPAGRDFIGADILDSCAELQAVVKSSIGIVSVDVDAAT
Ga0126376_1159053713300010359Tropical Forest SoilMAAKRKVCVTGPMRVKIAENILRDAGCELVLGKPQDDFRTFRYERKELIQLIGDCTIVYPSGRDVIGGEIL
Ga0126372_1022352813300010360Tropical Forest SoilMGAKRKVCVTGPMRVKIAENILRGAGCELVLGKPQDDFRTFRYERKELIQLIDDCPIVYPSGRDVIGGEILDSCPELQAVVKSSIGIE
Ga0134121_1299867513300010401Terrestrial SoilMAAKRKVCVTGPMRIKIVENALRDAGCELVLGKPQDDFRNFRYERKELINLVGDSSIIYPSGRDFIGGDVMDSCPDLQAVVKSSIGIETVDVDAA
Ga0134123_1150815123300010403Terrestrial SoilMAAKRKVCFTGPMRVRIVEDTLRQAGCELVLGKPQDDFRTYRYERKELVNLIGDCPIVYPSGRDMIGADILDSCPDLQAVVKSSIGI
Ga0134123_1214377413300010403Terrestrial SoilMAAKRKVCVTGPMRIKIVENALRDAGCELVLGKPQDDFRNFRYERKELINLVGDSSIIYPSGRDFIGGDVMD
Ga0126317_1093539413300011332SoilMATKRKVCFTGPTRLKVAEEILAGAGCELVMGKNQDDFREYRYPRRELVELIGDSAVVFPSGRDIIGGEIL
Ga0137323_105699413300011409SoilMGAKRKVCFTGPMRVTIAEDILRGAGCELVLGKPQDAFRTFRYERKELIQLIGDCPIVYPSGRDVIGGDILDSCPDLQAVVKSSIGIETVDVEA
Ga0137326_103151923300011417SoilMGAKRKVCFTGPMRVTIAEDILRGAGCELVLGKPQDAFRTFRYERKELIQLIGDCPIVYPSGRDVIGGDILDSCPDLQAVVKSSIGIET
Ga0137455_104850823300011429SoilMGAKRKVCMTGPTGLTVVADALRQAGCELVLGKPLDDFREFRYERKDLVKLIGDAPIVFPAGRDFIGADILDSCPDLQAVVKSSI
Ga0137453_102099813300012034SoilLTGPARITVAEDALRSADCELVLGKPQDDFRDFRYERKELIKLVGDCPILFPAGRDIIGAEILDSCPDLQAVVKSSIG
Ga0137327_105180123300012173SoilVAIKRKVCLTGPARIAVAEEALRSAGCELVLGKPQDDFRDFRYERKDLIKLIGDCPVVYPSGRDIISAEILDSCPDLQAVVKSSIGI
Ga0137327_106771623300012173SoilMAIKRRVCLTGPTGLTVAEGALRQAGCELVLGKPLDEFREFRYERKDLVKLIGDCPIVFPAGRDFIGADILDSCPELQAVVKS
Ga0137386_1071944713300012351Vadose Zone SoilMAAKRKICFTGPMRVNVAEQILRDAGCELVLGKPQDDFRNFRYERKDLVNLVGDCPIIYPSGRDVINA
Ga0137366_1054593523300012354Vadose Zone SoilMATKRKICFTGPMRTTVADNILRDAGCELVLGKPQDDFRTFRYERKELVNLIGDCPIVYPSGRDFIGADILD
Ga0137366_1099339023300012354Vadose Zone SoilMATKRKICFTGPMRTTVAEDILRDAGCELVLGKPQDDFRTFRYERKELVNLIGDCPIVYPSGRDFIGADILD
Ga0137361_1024293933300012362Vadose Zone SoilMGVKRKVCFTGPMRVKIAEDILRSAGCELVLGKPQDDFRTFRYERKELIQLIGDCPIVYPSGRDVIGGEILDSCPDLQAVV
Ga0137358_1019294313300012582Vadose Zone SoilMGVKRKVCFTGPMRVKIAEDILRSAGCELVLGKPQDDFRTFRYERKELIQLIGDCPIVYPSGRDVIGGEILDSCPDLHA
Ga0137394_1092978923300012922Vadose Zone SoilMGVKRKVCFTGPMRVKIAEDILRNAGCELVLGKPQDDFRTFRYDRKELIQLIGDCPIVYPSARDVIGGEILDSCPDLQAVVKSSIGIET
Ga0137404_1007744813300012929Vadose Zone SoilLGAKRKVCFTGPMRVKIAEDILRSAGCELVLGNPQDDFRTFRYERKELVQLIGDCPIVYPSGRDVIDGEI
Ga0137407_1002921063300012930Vadose Zone SoilMATKRKICFTGPMRTTVAEDMLRDAGCELVLGKPQDDFRTFRYERKELVNLIGDCPIVYPSGRDIIGADILDSCPDLQ
Ga0126375_1124972813300012948Tropical Forest SoilMAAKRKVCVTGPMRVKIAENILRDAGCELVMGKPQDDFRTFRYERKDLIQLIGDCTIVYPSGRDVIGGEILDSCPDLQAVVKSSIGI
Ga0164307_1118666113300012987SoilMAAKRKICVTGPMRIKIAEKMLRDAGCELVLGKPQDDFREFRYERKDLVALIGDSSIVYPSGRDMIGGDIHEELLATN
Ga0075321_100795033300014300Natural And Restored WetlandsVAVRQRVCLTGPARLKVAEDLLRAAGCALVLGKPADEFPDFRYERKDLINLIGDCPILYPTGRDYIGADILDSCANLQ
Ga0075345_117339613300014312Natural And Restored WetlandsMAAQRKICLTGPTRLTVAEDALRQAGCELVLGKPLDDFREFRYERKDLVKLIGDCQIVFPAGRDFIGADILDS
Ga0157380_1216444813300014326Switchgrass RhizosphereMAPKRKVCFTGPMRVRIVEDTLRQAGCELVLGKPQDDFRTYRYERKELVNLIGDCPIVYPSGRDMIGADILDSCPDLQAVVKSSIG
Ga0157379_1120681213300014968Switchgrass RhizosphereMAAKRKICVTGPMRIKIAEKMLRDAGCELVLGKPQDDFREFRYERKDLVALIGDSSIVYPSGRDMIGGDILDSCPDLQAVVKSSIGIETVDV
Ga0137418_1037051113300015241Vadose Zone SoilMAAKRKICFTGPMRVNVAEQILRDAGCELVLGKPQDDFRNFRYERKDLVNLVGDCPIIYPSGRDVINAEILVSWPDLQSVVKSSIGIETVDVNAA
Ga0180067_114383023300015257SoilMTGPTGLTVVADALRQAGCELVLGKPLDDFREFRYERKDLVKLIGDAPIVFPAGRDFIGADILDSCPELQAVVKSSIGIETVD
Ga0132256_10159152023300015372Arabidopsis RhizosphereMRIKIAEKMLRDAGCELVLGKPQDDFREFRYERKDLVALIGDCSIVYPSGRDMIGGDILDSCPDLQAVVKSSIG
Ga0132256_10243936813300015372Arabidopsis RhizosphereMAAKRKICVTGPMRIKIAEKMLRDAGCELVLGKPQDDFREFRYERKDLVALIGDSSIVYPSGRDMIGGDILDSCPDLQAVVKSSI
Ga0132257_10172573623300015373Arabidopsis RhizosphereMAAKRKICVTGPMRIKIAEKMLRDAGCELVLGKPQDDFREFRYERKDLVALIGDSSIVYPSGRDMIGGDILD
Ga0132257_10381681023300015373Arabidopsis RhizosphereMRIKIAEKMLRDAGCELVLGKPQDDFREFRYERKDLVALIADCSIVYPSGRDMIGGDILDSCPDLQAVVKSSIGIETVD
Ga0132255_10559655223300015374Arabidopsis RhizosphereMAAKRKVCLTGPPRIAVAQDTLRNAGCELVLGKPQDDFRDFRYERKDLIKLIGDCPILFPAGHHRRDFRLLL*
Ga0134083_1019444223300017659Grasslands SoilMATKRKICFTGPMRTMVAEDILRDAGCELVLGKPQDDFRTFRYERKELVNLIGDCPIVYPSGRDIIGADILDSCPDLQAVVKSSIGIETV
Ga0184623_1015866223300018056Groundwater SedimentMAFRRHGEETLQSELKDAMAAKRKVCLTGPPRITVAQDALRNAGCELVLGKSQDDFRDFRYERKDLIKLIGDCPVVYPSGRDTISAEILDSCADLQAVVKSSI
Ga0184637_1040877513300018063Groundwater SedimentVATRRKICLTGPARITVTEDALRNAGCELVLGKPQEDFRDFRYERKDLIKLIGDCPVVYPSGRDIICAEILDSCADL
Ga0184636_130693733300018068Groundwater SedimentMAVNRKVCFTGPTRLTLAEDMLRGAGCELVMGKNADEYRTFRYERRELIKLIGDAPVVFPSGRDIIG
Ga0184609_1027031923300018076Groundwater SedimentMAAKRKVCLTGPMRLRLIEELLLDADCELVLGKNTEDFRTHKYERRELIDLIGDCPVVYPSGRDVIGAEILDSCPELQAVV
Ga0184639_1011600013300018082Groundwater SedimentMAAKRKVCITGPARLTLAEDALRKAGCELVMGKNADEFRTFRYERRELISLIGDAPVVYPSGRDVIGADI
Ga0190265_1121599913300018422SoilMATTRKVCFTGPTRLKVAEEILRDAGCELVMGKNQDDFRTYKYERRELVELIGDCAVVFPSG
Ga0180108_116425013300020066Groundwater SedimentMGAKRKVCFTGHMRVTIAEDILRGAGCELVLGKPQDAFRTFRYERKELIQLIGDCPIVYPSGRDVVGGDI
Ga0194111_1084574813300020083Freshwater LakeMAAKRKVCVTGPMRIKIVENTLRDSGCEVVLGKPQDDFRNFRYERKELINLVGDSSIIYPSGRDFIGGDVMDSC
Ga0163150_1052716623300020195Freshwater Microbial MatMGAKRKVCMTGPTGLSVVADALRQAGCELVLGKPLDDFREFRYERKDLVKLIGDAPIVFPAGRDFIGADILDSCADLQAVVKSSIG
Ga0196963_1026057223300020215SoilMPAKRKVCFTGPMRTTVCEEILRAAGCELVLGKPQEDFRTFRYERKDLVNLVGDCSIIYPSGRDMIGADVLDSCPDVQAVVKSSIGIETV
Ga0210381_1037862723300021078Groundwater SedimentMTAKRKVCFTGPMRVRIVEDTLRQAGCELVLGKPQDDFRTYRYERKELVDLIGDCPIVYPSGRDMIGADILDSCPDLQAVVKSSIGIETVD
Ga0210380_1003473413300021082Groundwater SedimentMGAKRKVCMTGPTGLTVVADALRQAGCELVLGKPLDDFREFRYERKDLVKLIGDAPIVFPAGRDFIGADILDSCPDLQAVVKSSIGIETVDV
Ga0210377_1063920523300021090Groundwater SedimentMRHRMAAKRKVCFTGPSRLRVAEDTLRGAGCDLVLGKSQDDFPEFRYERKQLIDLVGDCDIVYPAGRDYIGGDILDSCANLQAVVKSSIGIETVDV
Ga0210384_1175582213300021432SoilMTTKNRKVCFTGPTRLKLAEEILRNAGCNLVMGKNQDDFRTYKYERREIVDLIGDCAVVFPSGRDVIGG
Ga0209324_1030305113300025174SoilMVSNRKVCFTGPTRLTLAEDMLRNAGCELVMGKNADDFRTFRYERRELIRLIGDAPVVFPSGRDIIGADILDSC
Ga0209002_1043803523300025289SoilMVSNRKVCFTGPTRLTLAEDMLRGAGCELVMGKNADEFRTFRYERRELIKLIGDAPVVFPSGRDIIGADILDSCANLQAVVKS
Ga0209321_1011888323300025312SoilMVSNRKVCFTGPTRLTLAEEMLRNAGCELVMGKNADEYRSFRYERRELIRLIGDAPVVFPSGRDIIGADILDSCANLQAVVKS
Ga0209321_1055546623300025312SoilMAVISKVCFTGPTRLTLAEDLLRNAGCELVMGKNADDFRTFRYERRELIRLIGDAPVVFPSGRDIIGADILDSCANL
Ga0209323_1017622913300025314SoilMVSKRKVCFTGPTRLTLAEDALRKADCELVMGKNVDDFRTFRYDRRELINLIGDAPVVYPSGRDIIGADILDSCANLQAVVK
Ga0209520_1032387523300025319SoilLAIKRKVCLTGPSRLTVAEELLRAAGCDLVLGKPADNFPDFHYERKELVSLIGNCEIVFPVGRDFISGDILDSCPDVQAVVKSSIGI
Ga0209640_1043158813300025324SoilMVSKRKVCFTGPTRLTLAEDALRKADCELVMGKNVDDFRTFRYDRRELINLIGDAPVVYPSGRDIIGADILDSCANLQAVVKS
Ga0209640_1118837113300025324SoilMAVNRKVCFTGPTRLTLAEDMLRGVGCELVMGKNADEFRTFRYERRELINLIGDAPVVFPSGRDIIGADILDSCANLQAVVK
Ga0209342_1111080713300025326SoilMAVNRKVCFTGPTRLTLAEDMLRNAGCELVMGKNADEFRTFRYERRELIKLIGDAPVVFPSGRDIIGADTLDSCANLQ
Ga0210143_102501723300025792Natural And Restored WetlandsMAAKRKICFTGPMRITVAEDILRNAACELVMGKPQDEFRTFRYERKELVNLIGDCSIVYPSGRDIVGADILDS
Ga0207682_1028825723300025893Miscanthus RhizosphereMRIKLAEKMLRDEGCELVLGKPQDDFREFRYERKDLVGLIGDCSIVYPSGRDMIGGDILDSCPDVQAVVKSSIGIETVDVDDAAMIGR
Ga0207660_1159168523300025917Corn RhizosphereMAIKRKVCLTGPMRITIVEDALRNAGCELVMGKPQDDFRTFRYERKDLINLIGDCSIVYPSGRDTIGGD
Ga0207644_1008576813300025931Switchgrass RhizosphereMAPKRKICVTGPMRIKLAEKMLRDEGCELVLGKPQDDFREFRYERKDLVGLIGDCSIVYPSGRDMIGGD
Ga0207709_1015396813300025935Miscanthus RhizosphereMAPKRKICVTGPMRIKLAEKMLRDEGCELVLGKPQDDFREFRYERKDLVGLIGDCSIVYPSGRDMIGGDILDSCPDVQ
Ga0207670_1023550323300025936Switchgrass RhizosphereMAAKRKVCFTGPMRVRIVEDTLRQAGCELVLGKPQDDFRTYRYERKELVNLIGDCPIVYPSGRDMIGADILDSCPDLQAVVK
Ga0207689_1002707913300025942Miscanthus RhizosphereMAPKRKICVTGPMRIKLAEKMLRDEGCELVLGKPQDDFREFRYERKDLVGLIGDSSIVYPSGRDMIGGDILDSCPDVQAVVKSSIGIETVDVDAATDL
Ga0207668_1081659713300025972Switchgrass RhizosphereMAPKRKICVTGPMRIKLAEKMLRDEGCELVLGKPQDDFREFRYERKDLVGLIGDCSIVYPSGRDMIGG
Ga0207641_1093409023300026088Switchgrass RhizosphereMAAKRKVCVTGPMRIKIVENALRDAGCELVLGKPQDDFRNFRYERKELINLVGDSSIIYPSGRDFIGGDVMDSCPDLQAVVKSSIGIETV
Ga0209470_116388313300026324SoilMVAEDILRDAGCELVLGKPQDDFRTFRYERKELVNLIGDCPIVYPSGRDIIGADILDSCPDLQAVVK
Ga0209879_103022423300027056Groundwater SandMGAKRKVCFTGPMRVKIAEDILRSAGCELVLGKPQDDFRTFRYERKELVQLIGDCPIVYPSGRDVIGGEILDSCPDLQAVVKSSIGIET
Ga0209843_109465913300027511Groundwater SandMGAKRKVCFTGPMRVKIAEDILRSAGCELVLGKPQDDFRTFRYERKELVQLIGDCPIVYPSGRDVIGGEILDS
Ga0209178_102973533300027725Agricultural SoilMAAKRKICVTGPMRIKIAEKMLRDAGCELVLGKPQDDFREFRYERKDLVALIGDSSIVYPSGRDMIGGDILDSCPDLQAV
Ga0209074_1000446413300027787Agricultural SoilMAAKRKICVTGPMRIKIAEKMLRDAGCELVLGKPQDDFREFRYERKDLVALIGDCSIVYPSGRDMIGGDILDSCPDLQAVVKSSIGIETVDVD
Ga0209726_1002209713300027815GroundwaterMAVNRKVCFTGPTRLTLAEDMLRGAGCELVMGKNADEFRTFRYERRELINLIGDAPVVFPSGRDIIGA
Ga0209514_1020691823300027819GroundwaterMAVNRKVCFTGPTRLTLAEDMLRGAGCELVMGKNADEFRTFRYERRELINLIGDAPVVFPSGRDIIGADILDSCANLQAVVKSSIGIETVD
Ga0209683_1022301633300027840Wetland SedimentMAVNRKVCFTGPTRLTLAEDMLRGAGCELVMGKNADEFRTFRYERRELINLIGDAPVVFPSGRDIIGADILDSCANLQAVVKSSIGI
Ga0209974_1000698353300027876Arabidopsis Thaliana RhizosphereMAAKRKVCFTGPMGVTIAEDILRNAGCELVMGKPQDDFRTFRYERKELVNLIGDCPIVYPSGRDMIGADILDSCPDLQAVV
(restricted) Ga0233417_1027733423300028043SedimentVAAKRKVCITGPTRLTLAADMLRDAGCELVMGKNVDDDRAFRYQRRELIDLIGDAPVVFPSGRDIIGADILDSCAELQAVVKSSIGIETVDV
Ga0307302_1025757013300028814SoilMAAKGKVCLTGPSSLKLAEETLRNAGCQLVLGKSADDFREFRYQRKELIDLIGDSDIAYPAGRDVMSAEILDSCPNLQAVVKSSIG
Ga0299907_1010624913300030006SoilLTPQRRVCFTGPSRLKVAEEILRAAGCDLVLGKPADEFPDFRYEHKELVRLIGDCAVVYPVGRDFIGGDILDSCPNVQAVVKSSIGIESVD
Ga0299913_1084364313300031229SoilMATNRKVCFTGPIRLKIAEDLLRGAGCELVLGKSSDDFRDYRYERRELIDLVGDSAVIFPAGRDFIGGDIMDSCPDLQAVVKSSI
Ga0308194_1035668923300031421SoilMAAKRKICFTGPMRVNVAEQILRDAGCELVLGKPQDDFRNFRYERKDLVNLVGDCPIIYPSGRDVINAEILDSCPDLQA
Ga0307473_1116292113300031820Hardwood Forest SoilMTTKNRKVCFTGPTRLKLAEEILRNAGCNLVMGKNQDDFRTYKYERREIVDLIGDCAVVFPSGRDVIGGDILDSC
Ga0310892_1028691913300031858SoilMAAKRKICVTGPMRIKIAEKMLRDAGCELVLGKPQDDFREFRYERKDLVALIGDSSIVYPSGRDMIGGDILDSCP
Ga0310884_1108240223300031944SoilMAAKRKICVTGPMRIKIAEKMLRDAGCELVLGKPQDDFREFHYERKDLVALIGDSSIVYPSGRDMIGGDILDSCPDLQAVVKSSIGIETVDVD
Ga0307470_1088334423300032174Hardwood Forest SoilMGVKRKVCFTGPMRVKIAEDMLRSAGCELVLGKPQDDFRTFRYERKELIQLIGDCPIVYPSGRDVIGGESLDSC
Ga0307471_10011287443300032180Hardwood Forest SoilMAIKRKVCLTGPARIAVAEDALRSAGCELVLGKPQDDFRDFRYERKDLIKLIGDCPVVYPSGRDIISAEILDSCPELQAVVKSSIGIET
Ga0307471_10229972413300032180Hardwood Forest SoilMGAKRKVCLTGPMRIKLAEEILRGAGCELVLGKPQDDFRTFRYERKELVNLIGDCPIVYPSGRDVITGEILDSCPDLQAVVKSSIGIETVDV
Ga0310812_1001331533300032421SoilMAPKRKICVTGPMRIKLAEKMLRDEGCELVLGKPQDDFREFRYERKDLVGLIGDCSIVYPSGRDMIGGDILDSCPDVQAVVKSSIGIETVDVD
Ga0335070_1148969713300032829SoilMAAKRKVCLTGPMRVTVAEDILRAAGCELVMGKPQDDFRHYRYERKELVNLVGDCPIIYPSGRDMISGDILDSCPDLQA
Ga0335069_1048562733300032893SoilMAERNRKVCFTGPTRLKLAEEMLRNAGCDLVMGKNQDDFRTYKYERREIVDLIGDCAVVFPSGRDIIGAD
Ga0326726_1072883213300033433Peat SoilMAAKRKVCITGPMRIKIVENTLRDAGCELALGKPQDDFRNFRYERKELINLVGDSSIIYPSGRDFIGGDVM
Ga0316627_10145472623300033482SoilMALKRIVCLTGPTGLTVAEDALRQAGCELVLGKPLDEFREFRYERKDLVKLIGDCPIVFPAGRDFIGADILDSCPDLQAVVK
Ga0316617_10044483923300033557SoilMALKRKVCLTGPTGLRVAEDALRQAGCELVLGKPLDEFREFRYERKDLVKLIGDCPIVFPAGRDFIGADILDS
Ga0364945_0029873_2_2833300034115SedimentMGAKRKVCFTGPMRVKIAEDMLRGAGCELVLGKPQDDFRTFRYERKELVQLIGDCPIVYPSGRDVIGGEILDSCPDLQAVVKSSIGIETVDVEA
Ga0364942_0139806_581_7873300034165SedimentMAAKRKVCFTGPTRLTLAEDVLRKAGCEVVMGTNADEFRTFRYERRELIKLIGDAPMVFPSGRDIIGAD
Ga0364934_0057245_1222_14433300034178SedimentVAIKRKVCLTGPARIAVAEDALRSAGCELVLGKPQDDYRDFRYERKDLIKLLGDCPVVYPAGRDIISAEILDSC
Ga0364943_0209123_458_7183300034354SedimentMGAKRKVCFTGPMRVKIAEDMLRGAGCELVLGKPQDDFRTFRYERKELVQLIGDCPIVYPSGRDVIGGEILDSCPDLQAVVKSSIGI
Ga0314793_059375_1_2073300034668SoilMAAKRKICVTGPIRIKIAEKMLRDAGCELVLGKPQDDFREFRYERKDLVALIGDCSIVYPSGRDIIGGD

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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