Metagenome / Metatranscriptome Family F063941

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F063941
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	71 residues
Representative Sequence	MSSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWGVLDASWTEKENGPGVESPKPFVIN
Number of Associated Samples	105
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.18 %
% of genes near scaffold ends (potentially truncated)	58.91 %
% of genes from short scaffolds (< 2000 bps)	80.62 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.225 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.380 % of family members)
Environment Ontology (ENVO)	Unclassified (32.558 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.713 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.56% β-sheet: 0.00% Coil/Unstructured: 56.44%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00589	Phage_integrase	6.20
PF01909	NTP_transf_2	3.10
PF13298	LigD_N	2.33
PF13683	rve_3	2.33
PF00263	Secretin	2.33
PF00072	Response_reg	1.55
PF00916	Sulfate_transp	1.55
PF07963	N_methyl	1.55
PF07885	Ion_trans_2	1.55
PF14874	PapD-like	0.78
PF05420	BCSC_C	0.78
PF14659	Phage_int_SAM_3	0.78
PF12796	Ank_2	0.78
PF00027	cNMP_binding	0.78
PF04226	Transgly_assoc	0.78
PF05168	HEPN	0.78
PF01406	tRNA-synt_1e	0.78
PF02371	Transposase_20	0.78
PF12686	DUF3800	0.78
PF01431	Peptidase_M13	0.78
PF04337	DUF480	0.78
PF13431	TPR_17	0.78
PF00144	Beta-lactamase	0.78
PF00672	HAMP	0.78
PF08681	DUF1778	0.78
PF07676	PD40	0.78
PF13424	TPR_12	0.78
PF12840	HTH_20	0.78
PF13290	CHB_HEX_C_1	0.78
PF02687	FtsX	0.78
PF07690	MFS_1	0.78
PF05973	Gp49	0.78
PF13544	Obsolete Pfam Family	0.78
PF04014	MazE_antitoxin	0.78
PF02899	Phage_int_SAM_1	0.78
PF00083	Sugar_tr	0.78
PF07366	SnoaL	0.78
PF08334	T2SSG	0.78
PF13817	DDE_Tnp_IS66_C	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	1.55
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	1.55
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	1.55
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.78
COG0215	Cysteinyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.78
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.78
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1895	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.78
COG2250	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.78
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.78
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.78
COG3132	Uncharacterized conserved protein YceH, UPF0502 family	Function unknown [S]	0.78
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.78
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.78
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.78
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.78
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.22 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	80.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	68.22 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.75 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.22 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.75 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.22 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.75 %
Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	0.78 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.78 %
Salinarimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.22 %
Salinarimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas	0.78 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.78 %
Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	0.78 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.78 %
Unclassified	root	N/A	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.22 %
Salinarimonas rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas → Salinarimonas rosea	0.78 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.78 %
Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	0.78 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.78 %
Unclassified	root	N/A	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001151\|JGI12713J13577_1000026	All Organisms → cellular organisms → Bacteria	60602	Open in IMG/M
3300001661\|JGI12053J15887_10176357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1103	Open in IMG/M
3300002245\|JGIcombinedJ26739_100889329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300002557\|JGI25381J37097_1013379	All Organisms → cellular organisms → Bacteria → Proteobacteria	1447	Open in IMG/M
3300002914\|JGI25617J43924_10118219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300005175\|Ga0066673_10531096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300005176\|Ga0066679_10957485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300005330\|Ga0070690_100073349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2227	Open in IMG/M
3300005332\|Ga0066388_101680250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1122	Open in IMG/M
3300005332\|Ga0066388_102978157	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	865	Open in IMG/M
3300005439\|Ga0070711_101107316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300005466\|Ga0070685_10849642	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300005549\|Ga0070704_101643613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Salinarimonadaceae → Salinarimonas → Salinarimonas rosea	593	Open in IMG/M
3300005557\|Ga0066704_10164005	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300005610\|Ga0070763_10561187	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005610\|Ga0070763_10854043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300005843\|Ga0068860_102130786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300005995\|Ga0066790_10098434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1256	Open in IMG/M
3300006046\|Ga0066652_101735935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300006057\|Ga0075026_100480324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300006174\|Ga0075014_100872712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300006176\|Ga0070765_100034861	All Organisms → cellular organisms → Bacteria → Acidobacteria	3964	Open in IMG/M
3300006176\|Ga0070765_101112052	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300006237\|Ga0097621_101110521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	743	Open in IMG/M
3300006904\|Ga0075424_102376138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300006914\|Ga0075436_100123576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1813	Open in IMG/M
3300007265\|Ga0099794_10041378	All Organisms → cellular organisms → Bacteria	2194	Open in IMG/M
3300009038\|Ga0099829_10663909	All Organisms → cellular organisms → Bacteria → Acidobacteria	866	Open in IMG/M
3300009038\|Ga0099829_10914395	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300009088\|Ga0099830_11386101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300009088\|Ga0099830_11579521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300009089\|Ga0099828_10786440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300010047\|Ga0126382_10413330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1057	Open in IMG/M
3300010048\|Ga0126373_10091256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	2798	Open in IMG/M
3300010048\|Ga0126373_10643773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1115	Open in IMG/M
3300010320\|Ga0134109_10086532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1078	Open in IMG/M
3300010320\|Ga0134109_10098648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300010358\|Ga0126370_12594584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300010361\|Ga0126378_10065789	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3448	Open in IMG/M
3300010361\|Ga0126378_10262693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1822	Open in IMG/M
3300010361\|Ga0126378_11028251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300010361\|Ga0126378_12365480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300010376\|Ga0126381_100037387	All Organisms → cellular organisms → Bacteria	5857	Open in IMG/M
3300010398\|Ga0126383_10056387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3303	Open in IMG/M
3300010858\|Ga0126345_1166727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300011444\|Ga0137463_1260409	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300012198\|Ga0137364_10357101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1091	Open in IMG/M
3300012203\|Ga0137399_10059480	All Organisms → cellular organisms → Bacteria	2818	Open in IMG/M
3300012205\|Ga0137362_10109756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2331	Open in IMG/M
3300012205\|Ga0137362_11715139	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300012285\|Ga0137370_10007049	All Organisms → cellular organisms → Bacteria	5196	Open in IMG/M
3300012361\|Ga0137360_10328593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1276	Open in IMG/M
3300012362\|Ga0137361_11134794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300012582\|Ga0137358_10014292	All Organisms → cellular organisms → Bacteria → Proteobacteria	5008	Open in IMG/M
3300012683\|Ga0137398_10492322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300012918\|Ga0137396_10809803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300012923\|Ga0137359_10129482	All Organisms → cellular organisms → Bacteria → Acidobacteria	2243	Open in IMG/M
3300012923\|Ga0137359_10793073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300012925\|Ga0137419_10079887	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2208	Open in IMG/M
3300012927\|Ga0137416_11349119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300012927\|Ga0137416_11757200	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300012971\|Ga0126369_10555441	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300015054\|Ga0137420_1467597	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1495	Open in IMG/M
3300015356\|Ga0134073_10001757	All Organisms → cellular organisms → Bacteria	4281	Open in IMG/M
3300016270\|Ga0182036_11940011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300016341\|Ga0182035_10071735	All Organisms → cellular organisms → Bacteria → Acidobacteria	2440	Open in IMG/M
3300016387\|Ga0182040_11820564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300016422\|Ga0182039_12168496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300018433\|Ga0066667_11187088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300018482\|Ga0066669_10413116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1147	Open in IMG/M
3300020021\|Ga0193726_1048371	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300020581\|Ga0210399_10193030	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1692	Open in IMG/M
3300020581\|Ga0210399_10737026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300021181\|Ga0210388_11510569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300021407\|Ga0210383_10655723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300021420\|Ga0210394_10562309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300021559\|Ga0210409_11072967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300021560\|Ga0126371_10099309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2897	Open in IMG/M
3300021560\|Ga0126371_10944231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300021560\|Ga0126371_11479109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300023056\|Ga0233357_1003023	All Organisms → cellular organisms → Bacteria	1482	Open in IMG/M
3300025915\|Ga0207693_10283082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1299	Open in IMG/M
3300025922\|Ga0207646_11091641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	703	Open in IMG/M
3300026295\|Ga0209234_1080078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300026547\|Ga0209156_10499010	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300026551\|Ga0209648_10402341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300026830\|Ga0207861_112044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300027074\|Ga0208092_110645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300027652\|Ga0209007_1179065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300027676\|Ga0209333_1089684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300027882\|Ga0209590_10101566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1719	Open in IMG/M
3300027889\|Ga0209380_10475962	Not Available	729	Open in IMG/M
3300027903\|Ga0209488_11087650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300028047\|Ga0209526_10003639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10491	Open in IMG/M
3300028047\|Ga0209526_10891557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300028536\|Ga0137415_10726993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	804	Open in IMG/M
3300028906\|Ga0308309_10025601	All Organisms → cellular organisms → Bacteria → Acidobacteria	3964	Open in IMG/M
3300029911\|Ga0311361_10437169	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1347	Open in IMG/M
3300031573\|Ga0310915_10055745	All Organisms → cellular organisms → Bacteria	2566	Open in IMG/M
3300031681\|Ga0318572_10559089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300031718\|Ga0307474_10062332	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2761	Open in IMG/M
3300031718\|Ga0307474_10430711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1029	Open in IMG/M
3300031719\|Ga0306917_10554929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300031719\|Ga0306917_10663477	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300031740\|Ga0307468_101001012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium RIFCSPLOWO2_12_FULL_64_8	735	Open in IMG/M
3300031744\|Ga0306918_10055526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2652	Open in IMG/M
3300031748\|Ga0318492_10287134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300031753\|Ga0307477_10043366	All Organisms → cellular organisms → Bacteria	3089	Open in IMG/M
3300031753\|Ga0307477_10625230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300031771\|Ga0318546_10819454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300031795\|Ga0318557_10026444	All Organisms → cellular organisms → Bacteria	2312	Open in IMG/M
3300031823\|Ga0307478_10419591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1110	Open in IMG/M
3300031833\|Ga0310917_10394009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300031833\|Ga0310917_10500782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300031879\|Ga0306919_10526934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300031897\|Ga0318520_10629556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300031942\|Ga0310916_10577905	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	955	Open in IMG/M
3300031947\|Ga0310909_11590324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300032001\|Ga0306922_10436093	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1401	Open in IMG/M
3300032001\|Ga0306922_10806060	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300032001\|Ga0306922_11280854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300032042\|Ga0318545_10227212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300032059\|Ga0318533_10517823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300032076\|Ga0306924_11512006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300032094\|Ga0318540_10224982	All Organisms → cellular organisms → Bacteria → Proteobacteria	905	Open in IMG/M
3300032180\|Ga0307471_100261976	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1790	Open in IMG/M
3300032261\|Ga0306920_100861510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1327	Open in IMG/M
3300032261\|Ga0306920_103911670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300033289\|Ga0310914_11613233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.90%
Host-Associated	Host-Associated	3.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.57%
Plants	Host-Associated → Plants	3.10%
Aquatic	Environmental → Aquatic	2.33%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.80%
Sediment	Environmental → Aquatic → Sediment	2.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.55%
Peat	Environmental → Terrestrial → Peat	0.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%
Roots	Host-Associated → Plants → Roots	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.42%
Loam	Environmental → Terrestrial → Soil → Loam	18.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	32.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.55%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.78%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	19.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.10%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.10%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.33%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.33%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.55%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.55%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.78%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001151	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026830	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 33 (SPAdes)	Environmental	Open in IMG/M
3300027074	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF014 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12713J13577_10000261	3300001151	Forest Soil	SFGASHKLRQQRLGHAAGSPVTDQIYTHVISEDAKRVAAQLGDAVWGISDVNGREMKKGLEVAAPKPFLVN*
JGI12053J15887_101763571	3300001661	Forest Soil	MNSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGKAVWGVLDPSWTPKGKRLRS
JGIcombinedJ26739_1008893292	3300002245	Forest Soil	MNSFGASQKLRQQRLGHAEGSPVTETIYTHVISEDGKRIAAQLGKAIWGVLDPSWTFKENGSGVEAPKPLYLN*
JGI25381J37097_10133793	3300002557	Grasslands Soil	MTTRVNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDEKRIAAQLGKAVWGVLAPSWTLNENGSGVESPMPLYL
JGI25617J43924_101182192	3300002914	Grasslands Soil	MSSFGASQKLRQQRLGHVDGSPVTETIYTHVISEDGKQIAAQLGKAVWGVLDPSWTLKENGSGVEPPKPLYLN*
Ga0066673_105310962	3300005175	Soil	RQQRLGHADGSPVTDTIYTHVISEDGKRIAAQLGNAVWGILDASWTEKGNGLRVESPKPFVIN*
Ga0066679_109574851	3300005176	Soil	TLMNSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRVAAQLGNAVWGILDASWTEKRNGPEGASSKPFLIN*
Ga0070690_1000733492	3300005330	Switchgrass Rhizosphere	MILRNGNATLMRSFGALQKLRQERLGHADGSLITESVYTHLISVDGKRVAAQLGSAVWGVLDAIGRQLDVKGGENKNGSGVEPPKPFSIN*
Ga0066388_1016802504	3300005332	Tropical Forest Soil	MSSFGASQKLRQQRLGHADGSPITETIYTHVISEDGKRIAAQLGNAVWGVLDPSWTLKEKMGVCLVANSRYIN*
Ga0066388_1029781571	3300005332	Tropical Forest Soil	MNSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWGILDASWTEKRNGSGVEPPKPFV
Ga0070711_1011073161	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDGKRIAAQLGKAVWGVLDPSWTLKENGSGVESPKPLYLN*
Ga0070685_108496421	3300005466	Switchgrass Rhizosphere	LMSSFGAPQKLRQERLGHADGSPITESVYTHVISEDGKRVAADWAALSGEFWTQLDASWTEKDGVNP*
Ga0070704_1016436131	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ILRNGNATLMRSFGALQKLRQERLGHADGSLITESVYTHLISVDGKRVAAQLGSAVWGVLDAIGRQLDVKGGENKNGSGVEPPKPFSIN*
Ga0066704_101640051	3300005557	Soil	MSSFGASQKLRQQRLGHPDGSPVTETIYTHVISEDGKRIAAQLGNAVWGILDAIGRKKRNGLEGASSKPSLIN*
Ga0070763_105611871	3300005610	Soil	QQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWGVLDAIGRKKRNGPEGASSKPFLIN*
Ga0070763_108540432	3300005610	Soil	MSSFGAPQNLRQQRLGHAAGSPVTESVYTHVIGDDGKRVAAQLGDAVWGVLDASWT*
Ga0068860_1021307861	3300005843	Switchgrass Rhizosphere	ATLMRSFGALQKLRQERLGHADGSLITESVYTHLISVDGKRVAAQLGSAVWGVLDAIGRQVDVKGGENKNGSGVEPPKPFSIN*
Ga0066790_100984342	3300005995	Soil	MSSFGAPQKLRQERLGHADGSPVTESVYTHVISEDGKRVAAQLGDVVWGILGAMRRQLGVNRTEKENGSGAEPPKPLYRN*
Ga0066652_1017359352	3300006046	Soil	MTTRVNSFGASQKLRQQRLGHADGSPITETIYTHVISEDGKRVAAQLGNAVWGVLDPSWTLKEK
Ga0075026_1004803241	3300006057	Watersheds	MNSFGAPLKLRQQRLGHVDGSPVTETIYMHMVSEDGRRIAERLGDAVWGKVLEHFGPETGNGLEGASPMPSRIN*
Ga0075014_1008727121	3300006174	Watersheds	GHADGSPVTESVYTHVISEDGKRVAAQLGNAVWGALDAIGRQLDVNGRQKKNGSGVESPKPLYLN*
Ga0070765_1000348613	3300006176	Soil	MNSFGASQKLRQQRLGHAAGSPVTDTIYTHVISEDAKRIAAQLGDAVWGISVVSGRDKKKGLEVAPPKPFLIN*
Ga0070765_1011120523	3300006176	Soil	ANATLMNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDGKRIAAQLGNAVWGILDASWTEKENGSGVESPKPFVIN*
Ga0097621_1011105213	3300006237	Miscanthus Rhizosphere	QQRLGHADGSPITESVYTHVISEDGKRVAAKLGDAVWGVLDASWTEKKNGSGVEAPKPFAIN*
Ga0075424_1023761381	3300006904	Populus Rhizosphere	MSSFGASQKLRQQRLGHAAGSPITESIYTHVMSEDGKRIAAQLGNAVWGVLDPSWTLEE
Ga0075436_1001235763	3300006914	Populus Rhizosphere	MNSFGASQKLRQQRLCHADGSPVTDTIYTHVISEDGKRIAAQLGNAVWGILDASWTEKGNGPEGASSKPFVIN*
Ga0099794_100413782	3300007265	Vadose Zone Soil	MNSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGRRIAAQLGKAVWGILDPSWTLKENSSGVESPKPLYLN*
Ga0099829_106639093	3300009038	Vadose Zone Soil	GASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAGQLGNAVWGILDASWTEKENGSRVESPKPFVIN*
Ga0099829_109143952	3300009038	Vadose Zone Soil	MSSFRASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAVQLGNAVWGVLDAIGRKKRN
Ga0099830_113861011	3300009088	Vadose Zone Soil	MSSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWGVLDASWTEKENGPGVESPKPFVIN*
Ga0099830_115795212	3300009088	Vadose Zone Soil	MVPRGNGFHAFRHANATLMSSFGASRKLRQQRLGQADGSLVTETIYTHAICEDGKRIAAQLGNAVWGVLEAIGRKKRNGSEGASSKPFLIN
Ga0099828_107864402	3300009089	Vadose Zone Soil	MSSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWGVLDASWTEKEN
Ga0126382_104133303	3300010047	Tropical Forest Soil	MSSFGASQKLRQQRLGHADGSPITESIYTHVISEDGKRVAAQLGNAVWGILDPIGPRKKNGSGVEPPKPFRIN*
Ga0126373_100912561	3300010048	Tropical Forest Soil	MSRFGAPLKLRQLRLGHVDGSPVTETIYTHVVSEDGRRIAERLGDAIWSKVLDHSGPEKGNGSGVEPPKPFAIN*
Ga0126373_106437732	3300010048	Tropical Forest Soil	MPRGNGFHAFRHANATLMDSFRALQKLRQQRLGHADGSPITETVYTHVISEDGKRIAAQLGNAVWGILDPDGPKNENGSGVEPPKPFVIN*
Ga0134109_100865323	3300010320	Grasslands Soil	MTTRVNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDGKRIAAQLGRAVWGVLAPSWTLKENGSGVESPK
Ga0134109_100986482	3300010320	Grasslands Soil	LRQQRLGHADGSPVTETIYTHAISEDGKRIAAQLGNAVWGILDATWTEKGNGLRVESPKPFVIN*
Ga0126370_125945841	3300010358	Tropical Forest Soil	HANATLMNSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWGILDASWTEKGNGSGVEPPKPVVIN*
Ga0126378_100657892	3300010361	Tropical Forest Soil	MNSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWRILDASWTEKGNGSGVEPPKPFVIN*
Ga0126378_102626932	3300010361	Tropical Forest Soil	MSSFGASQKLRQQRLGHADGSPVTETIHTHVISEDGKRIAAQLGNAVWGALDAIERKKRNGSEGASSKPFLIN*
Ga0126378_110282513	3300010361	Tropical Forest Soil	MDSFGAPQKLRQQRLGHADGSPITETVYTHVISEDGKRIAAQLGNAVWGILDPNGPKNENGSGVEPPKPFAIN*
Ga0126378_123654801	3300010361	Tropical Forest Soil	MSSFGAPLKLRQQRLGHVDGSPITETIYTHVVSEDGKHYAAKLAKAVWGVLDARWTPKK
Ga0126381_1000373874	3300010376	Tropical Forest Soil	MSSFGASQKLRQQRLGHADGSPVTETIHTRVISEDGKRIAAQLGNAVWGALDAIERKKRNGSEGASSKPFLIN*
Ga0126383_100563875	3300010398	Tropical Forest Soil	MSSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWGVLDAIGRKKRNGS
Ga0126345_11667271	3300010858	Boreal Forest Soil	MNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDGRRIAAQLGKAIWGVLDPSWTLKDGVNPYGGTNYLDTV
Ga0137463_12604093	3300011444	Soil	LMSSFGAPQKLRQERLGHADGSPVTESVYTHVISEDGKRVAAQLGNAVWRVVDATGRQLDVDGHKKGNGSGVESPKPLYLN*
Ga0137364_103571011	3300012198	Vadose Zone Soil	LRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWGILDASWTEKRNGPEGASSKPFQIN*
Ga0137399_100594805	3300012203	Vadose Zone Soil	MNSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGKAVWGVLDPSWTLKENGSGVESPKPLYLN*
Ga0137362_101097563	3300012205	Vadose Zone Soil	MSSFGAPQKLRQERLGHADGSLVAGSVYTHVISEDGMRVAAQLGNAVWGVLDAIGRQLDVNGRKKKNGLGVETPKPLYLN*
Ga0137362_117151391	3300012205	Vadose Zone Soil	SDEQFWGLQKLRKQRLGHADGSPVAEIIYIHVSGEDGKQIAVQLGNAVSGVLDPSRALKEKRRSAW*
Ga0137370_100070493	3300012285	Vadose Zone Soil	MTTRVNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDGKRIAAQLGRAVWGVLAPSWTLKENGSGVESPKRCI*
Ga0137360_103285931	3300012361	Vadose Zone Soil	LGHADGSPVTETIYTHVISEDGKRVAAQLGNAVWGILDGSWTEKENGSGVEAPKPLHLN*
Ga0137361_111347941	3300012362	Vadose Zone Soil	MSSFGAPQKLRQERLGHADGSLVAGSVYTHVISEDGMRVAAQLGNAVWRVLDAIRRQLDLNGCKKKNGLGVETPKPLYVN*
Ga0137358_100142927	3300012582	Vadose Zone Soil	QQRLGHADGSPVTETIYTHVISEDGRRIAAQLGKAVWGVLDPSWTLKENGPGVESPKPLYLN*
Ga0137398_104923221	3300012683	Vadose Zone Soil	GASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGKAVWGVLDPSWTLKENGSGVEPPKPLYLN*
Ga0137396_108098032	3300012918	Vadose Zone Soil	MSSFGASLKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWGILDTSWTEKENGRGVESPKPFVIN*
Ga0137359_101294821	3300012923	Vadose Zone Soil	MNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDGKRIAAQLGKAVWGILDPSWTLKENGSGVESPKPLYLN*
Ga0137359_107930731	3300012923	Vadose Zone Soil	MSSFGAPQKLRQQRLGHADGSPITETIYTHVISEDGKRIAAQLGKAVWGVLDLSWTLKENGSGVESPKPLYLN*
Ga0137419_100798871	3300012925	Vadose Zone Soil	MNSFGASQKLRQQRLGHAEGSPVTETIYTHVISEDGKRTAAQLGKAIWGDLDPSWTLEF
Ga0137416_113491191	3300012927	Vadose Zone Soil	MSSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWGILDTSWTEKENGRGVESPKP
Ga0137416_117572002	3300012927	Vadose Zone Soil	MSSFEASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAARLGNTVLGILDA
Ga0126369_105554413	3300012971	Tropical Forest Soil	MNSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKHIAAQLGNAVWRILDASWTEKGNGSGVEPPKPFVIN*
Ga0137420_14675971	3300015054	Vadose Zone Soil	MVSTPSVMPNATLMNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDGKRIAAQLGKAVWGILDPSWTLKENGSGVESPKPLYLN*
Ga0134073_100017578	3300015356	Grasslands Soil	MTTRVNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDEKRIAAQLGKAVWGVLTPSWTLNGSLLCR
Ga0182036_119400111	3300016270	Soil	MPQGNGFHAFRHANTTLMDSFGAPQKLRQQRLGHGDGSPITETVYTPVIEDGKRIAAQLGNPVWGILDPNGSKNEN
Ga0182035_100717354	3300016341	Soil	SLKLRQERLGHAQGSRVTETIYTHVISEDARRIAAQLGEAVWGRILDPGWTQEAKRPSVESAKPFQIN
Ga0182040_118205642	3300016387	Soil	MNSFGASLKLRQERLGHAQGSRVTETIYTHVISEDARRIAAQLGEAVWGRILDPGWTQE
Ga0182039_121684962	3300016422	Soil	MPQGNGFHAFRHANTTLMDSFGAPQKLRQQRLGHGDGSPITETVYTPVIEDGKRIAAQLGNPVWGILDPNGSKNENGPGVEPPKPFV
Ga0066667_111870882	3300018433	Grasslands Soil	MSSFGASQKLRQQRLGHPDGSPVTETIYTHVISEDGKRIAAQLGNAVWGILDAIGRKKRNGLEGASSKPSLIN
Ga0066669_104131163	3300018482	Grasslands Soil	MTTRVNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDGKRIAEQLGKAVWGILDPSWTLKEN
Ga0193726_10483713	3300020021	Soil	MRAREKVSGIVANNFGASLKLRQQRLGHVDGSPVTESIHTHVVSEDGRRVAAQLGNAVWGVLDAIGRKKNGSGVESPKPLYLN
Ga0210399_101930301	3300020581	Soil	QRLGHADGSPVTETVYTHVISEDGKRVAAQLGNAVWGVLDASWTEKKNGLGVESPKPFVI
Ga0210399_107370262	3300020581	Soil	MNSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGKAVWGVLDPSWTLKENGSGVESPKPLYLN
Ga0210388_115105693	3300021181	Soil	RQQRLGHADGSPVTETIYTHVISEDGKRIAAQLDKAVWGVLDPSWTLKENGSGVESPKPLYLN
Ga0210383_106557232	3300021407	Soil	NLRQQRLGHAAGSPVTESVYTHVISDDGKRVAAQLGDAVWGVLDASWTEKKNGSGVEAPKPLYLQ
Ga0210394_105623092	3300021420	Soil	MNSFGASQKLRQQRLGHAEGSPVTETIYTHVISEDGKRIAAQLGKAIWGVLDPSWTLKENGSGVEAPKPLYLN
Ga0210409_110729671	3300021559	Soil	MSSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWGVLDAIGRKKRNGPEGASSKPFLIN
Ga0126371_100993092	3300021560	Tropical Forest Soil	MSSFGASQKLRQQRLGHADGSPVTETIHTRVISEDGKRIAAQLGNAVWGALDAIERKKRNGSEGASSKPFLIN
Ga0126371_109442311	3300021560	Tropical Forest Soil	MNSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWRILDASWTEKGNGSGVEPPKPFVIN
Ga0126371_114791092	3300021560	Tropical Forest Soil	LLILGIRMPRGNGFHAFRHANATLMDSFRALQKLRQQRLGHADGSPITETVYTHVISEDGKRIAAQLGNAVWGILDPDGPKNENGSGVEPPKPFVIN
Ga0233357_10030232	3300023056	Soil	MNSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGKAVWGVLDPSWTLKEN
Ga0207693_102830822	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSSFGASQKLRQQRLGHADGSPITETIYTHVISEDGKRIAAQLGNAVWGILDASWTEKENGPEGASSKPFVIN
Ga0207646_110916411	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MSRFGAPQKSRQERLGHADGSPVTETVYTHAISEDGKRVAAQLGNAVWGVLDASWAEKKNGPGVESPKPFVIN
Ga0209234_10800782	3300026295	Grasslands Soil	MTTRVNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDEKRIAAQLGKAVWGVLAPSWTLNENGSGVESPMPLYLN
Ga0209156_104990103	3300026547	Soil	TERLGHADGSPGTETTYTHVISEDGKRVAAQLGNAVWGILDASWTEKGNGSGVESPKPFVIN
Ga0209648_104023411	3300026551	Grasslands Soil	MNSFEASQKLRQQRLGHADGSAVADTIYTHVISEDGKRIAAQLGNAVWGILDASWTEKGNGPEGASSKPFVIN
Ga0207861_1120441	3300026830	Tropical Forest Soil	FRHANATLMNSFGASQKLRQQRLGHAEGSPITETIYTHVISEDGKRIAAQLGKAVWGVLDPSWTLKENGSGVEPPKPLYLN
Ga0208092_1106451	3300027074	Forest Soil	MLQTSKFQESEQRLGHADSSPITESVYTHVISEDRKRIAAQLGDAVWGVLDASWTEKKNGSEVEASKPLYLQ
Ga0209007_11790651	3300027652	Forest Soil	GAPQKLRQQRLGHAAGSPITESVYTHVISDDGKRVAAQLGDAVWGVLDASWAEKKNGSGVEAPSRCI
Ga0209333_10896842	3300027676	Forest Soil	MNSFGASHKLRQQRLGHAPGSPVTDQIYTHVISEDAKRVAAQLGDAVWGISDVNGREKKN
Ga0209590_101015661	3300027882	Vadose Zone Soil	QRLGHADGSPVTETIFTHVISEDGKRIAAQLGNAVWGVLDAIGRKKRNGLKGASSKPFQI
Ga0209380_104759622	3300027889	Soil	MNSFGASQKLRQQRLGHAAGSPVTDTIYTHVISEDAKRIAAQLGDAVWGISVVSGRDNKK
Ga0209488_110876501	3300027903	Vadose Zone Soil	MNSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGRRIAAQLGKAVWGVLDPSWTLKENSSGVESPKPLYLN
Ga0209526_100036399	3300028047	Forest Soil	FRHANATLMNSFGASQKLRQQRLGHAEGSPVTETIYTHVISEDGKRIAAQLGKAIWGVLDPSWTFKENGSGVEAPKPLYLN
Ga0209526_108915572	3300028047	Forest Soil	MSSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWGVLDAIGRKKRN
Ga0137415_107269932	3300028536	Vadose Zone Soil	MSSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRIAAQLGNAVWGILDTSWTEKENGRGVE
Ga0308309_100256013	3300028906	Soil	MNSFGASQKLRQQRLGHAAGSPVTDTIYTHVISEDAKRIAAQLGDAVWGISVVSGRDKKKGLEVAPPKPFLIN
Ga0311361_104371692	3300029911	Bog	GFHAFRHANATLMNSFGASHVLRQQRLGHAAGSPITNSVYTHIVTEDAKRIAAQLGDAVWGIPDVNGREMKKGLEAAAPKPLLLN
Ga0310915_100557452	3300031573	Soil	MNSFGASQKLRQQRLGHAEGSPVTETIYTHVISEYGRRIAAQLGKAVWGVLDPSRTLKENGSGVESPKPLYLN
Ga0318572_105590891	3300031681	Soil	FGASQKLRQQRLGHAEGSPVTETIYTHVISEDGKRIAAQLGKAVWGVLDPSWTLKENGSGVEPPKPLYLN
Ga0307474_100623321	3300031718	Hardwood Forest Soil	MNSFGASQKLRQQRLGHADDSPVTDTIYTHVISEDGKRIAAQLGNAVWGVLDASWTEKKNGLGVEPPKPFVIN
Ga0307474_104307111	3300031718	Hardwood Forest Soil	HSRHANATLMNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDGRRIAAQLGNAVWGILDASWTEKGNGSGVEPPKPFVIN
Ga0306917_105549293	3300031719	Soil	ATLMNSFGASLKLRQERLGHADGSRVTETIYTHVISEDARRIAGQLGEAVWGRILDPSWTQEAKRPSVESAKPFHIN
Ga0306917_106634771	3300031719	Soil	RFGAPLKLRQQRLGHVDGSPVTETIYTHVVSEDGRRIAERLGDAIWSKVLDHSGPKKGNGSGVEPPKPFHIN
Ga0307468_1010010122	3300031740	Hardwood Forest Soil	RSLGALQKLRQDRLGHADGSPITESVYTRLISVDGKRVAAQLGSAVWGVLDAIGRQLDVKGGENKNGSEWSLLSRL
Ga0306918_100555261	3300031744	Soil	AFRHANATLMNSFGASQKLRQQRLGHAEGSPVTETIYTHVISEDGKRIAAQLGKAVWGVLDPSWTLKENGSGVEPPKPLYLN
Ga0318492_102871341	3300031748	Soil	SFGASQKLRQQRLGHAEGSPVTETIYTHVISEYGRRIAAQLGKAVWGVLDPSRTLKENGSGVESPKPLYLN
Ga0307477_100433664	3300031753	Hardwood Forest Soil	MRQQRLGHADGSPGTETIYTHVISQDGKRIAAQLGNAVWGVLDAIRRKKRNGSEGASSKPFLIK
Ga0307477_106252301	3300031753	Hardwood Forest Soil	MNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDGRRIAAQLGNAVWGILDASWTEKGNGSGVEPPKPFVIN
Ga0318546_108194541	3300031771	Soil	MDSFGAPQKLRQQRLGHADGSPITETVYTYVISEDGKRIAAQLGNAVWGILDPMDPKRKT
Ga0318557_100264441	3300031795	Soil	HADGSRVTETIYTHVISEDARRIAGQLGEAVWGRILDPSWTQEAKRPSVESAKPFHIN
Ga0307478_104195911	3300031823	Hardwood Forest Soil	NATLMNSFGASHKLRQQRLGHAAGSPVTEAIYTHVISEDAKRIAAQLGDAVWGISYASVREKQNGLEVAASKPFQIN
Ga0310917_103940092	3300031833	Soil	MDSFGAPQKLRQQRLGHADGSPITETVYTYVISEDGKRIAAQLGNPVWGILDPNGSK
Ga0310917_105007821	3300031833	Soil	MNSFGASLKLRQERLGHAQGSRVTETIYTHVISEDARRIAAQLGEAVWGRILDPGWTQEAKRPSVESAKPFQIN
Ga0306919_105269343	3300031879	Soil	MNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDGKRIAAQLGSAVWGILDASWTEKGNGSGVEPPKPFVIN
Ga0318520_106295561	3300031897	Soil	MDSFGAPQKLRQQRLGHADGSPITETVYTYVISEDGKRIAAQLGNAVWGILDPMDPKRKTAQE
Ga0310916_105779053	3300031942	Soil	LRQQRLGHADGSPVTDTIYTHVISEDGKRIAAQLGNAVWGILDASWTEKGNGSGVEPPKPFVIN
Ga0310909_115903242	3300031947	Soil	KLRQQRLGHADGSPVTETIYTHVISEDGKRVAAQLGNAVWGVLDAIGRKKQNGSEVEPPKPFYIN
Ga0306922_104360932	3300032001	Soil	MPQGNGFHAFRHANTTLMDSFGAPQKLRQQRLGHGDGSPITETVYTPVIEDGKRIAAQLGNPVWGILDPNGSKNENGPGVEPPKPFVIN
Ga0306922_108060603	3300032001	Soil	ASLKLRQERLGHADGSRVTETIYTHVISEDARRIAGQLGEAVWGRILDPSWTQEAKRPSVESAKPFHIN
Ga0306922_112808541	3300032001	Soil	VAAHSGYCFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRVAAQLGNAVWGVLDAIGRKKQNGSEVEPPKPFYIN
Ga0318545_102272121	3300032042	Soil	QKLRQQRLGHADGSPVTDTIYTHVISEDGKRIAAQLGSAVWGILDASWTEKGNGSGVEPPKPFVIN
Ga0318533_105178231	3300032059	Soil	MNSFGASLKLRQERLGHAQGSRVTETIYTHVISEDARRIAAQLGEAVWGRILDPGWTQEAKRPSVESAKPFQ
Ga0306924_115120061	3300032076	Soil	QQRLGHADGSPVTETIYTHVISKDGKRIAAQLSNAVWGILDASWTEKRNGLGVEPPKPFIIN
Ga0318540_102249823	3300032094	Soil	NTTLMNSFGASQKLRQQRLGHAEGSPVTETIYTHVISEYGRRIAAQLGKAVWGVLDPSWTLKENGSGVESPQAVVSKLGNGCGGSI
Ga0307471_1002619763	3300032180	Hardwood Forest Soil	MCAASSTGSVRSPVIAHANATLMNSFGASQKLRQQRLGHADGSPVTETIYTHVISEDGKRVAAQLGNAVWGILDASWTEKRNGPEGASSKPFQIN
Ga0306920_1008615102	3300032261	Soil	VQVHRTGSENLCEGTIYMPQGNGFHAFRHANTTLMDSFGAPQKLRQQRLGHGDGSPITETVYTPVIEDGKRIAAQLGNPVWGILDPNGSKNENGPGVEPPKPFVIN
Ga0306920_1039116701	3300032261	Soil	MNSFGASQKLRQQRLGHADGSPVTDTIYTHVISEDGKRIAAQLGNAVWGILDASWTEKGNGSGVEPPKPFVIN
Ga0310914_116132332	3300033289	Soil	MNSFGASLKLRQERLGHAQGSRVTETIYTHVISEDARRIAAQLGEAVWGRILD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063941

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences