Metagenome / Metatranscriptome Family F063963

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F063963
Family Type	Metagenome / Metatranscriptome
Number of Sequences	129
Average Sequence Length	101 residues
Representative Sequence	MRSFCLICFLLAFTTLCAFGQQPFLDTHQWAALRDESSGAAPYENLRYLTGLHRVPATPEFDKAAQFVLQRAREYGLADAHSEQFPIDGTKNYGLMRSYLAW
Number of Associated Samples	112
Number of Associated Scaffolds	129

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.00 %
% of genes near scaffold ends (potentially truncated)	94.57 %
% of genes from short scaffolds (< 2000 bps)	89.92 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.899 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil (10.853 % of family members)
Environment Ontology (ENVO)	Unclassified (25.581 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.612 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 42.31% β-sheet: 10.77% Coil/Unstructured: 46.92%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 129 Family Scaffolds
PF00733	Asn_synthase	41.86
PF13537	GATase_7	4.65
PF16655	PhoD_N	2.33
PF00005	ABC_tran	1.55
PF13478	XdhC_C	0.78
PF00664	ABC_membrane	0.78
PF13186	SPASM	0.78
PF01174	SNO	0.78
PF03699	UPF0182	0.78
PF13174	TPR_6	0.78
PF00723	Glyco_hydro_15	0.78
PF02517	Rce1-like	0.78
PF01475	FUR	0.78
PF03992	ABM	0.78
PF01042	Ribonuc_L-PSP	0.78
PF00578	AhpC-TSA	0.78
PF01926	MMR_HSR1	0.78
PF00156	Pribosyltran	0.78

COG ID	Name	Functional Category	% Frequency in 129 Family Scaffolds
COG0118	Imidazoleglycerol phosphate synthase glutamine amidotransferase subunit HisH	Amino acid transport and metabolism [E]	0.78
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.78
COG0311	Pyridoxal 5'-phosphate synthase subunit PdxT (glutamine amidotransferase)	Coenzyme transport and metabolism [H]	0.78
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.78
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	0.78
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.78
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.90 %
Unclassified	root	N/A	3.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.90 %
Unclassified	root	N/A	3.10 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.90 %
Unclassified	root	N/A	3.10 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	81.40 %
Unclassified	root	N/A	3.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	78.29 %
Unclassified	root	N/A	3.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.55 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.78 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.29 %
Unclassified	root	N/A	3.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.55 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.78 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.29 %
Unclassified	root	N/A	3.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.55 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.78 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.29 %
Unclassified	root	N/A	3.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.55 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.78 %
Alicyclobacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.29 %
Unclassified	root	N/A	3.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.55 %
Tumebacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Tumebacillus	0.78 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	78.29 %
Unclassified	root	N/A	3.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.55 %
Tumebacillus flagellatus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Tumebacillus → Tumebacillus flagellatus	0.78 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10197031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300001175\|JGI12649J13570_1008629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1242	Open in IMG/M
3300001593\|JGI12635J15846_10153172	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1578	Open in IMG/M
3300001593\|JGI12635J15846_10900160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300002245\|JGIcombinedJ26739_100958473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300002907\|JGI25613J43889_10080121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300003505\|JGIcombinedJ51221_10280432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300004082\|Ga0062384_101380462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300004091\|Ga0062387_101247667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300004091\|Ga0062387_101605116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300004092\|Ga0062389_101658432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300004092\|Ga0062389_102773072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300004092\|Ga0062389_103013379	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300004092\|Ga0062389_104015049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300004092\|Ga0062389_104691321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Alicyclobacillaceae → Tumebacillus → Tumebacillus flagellatus	514	Open in IMG/M
3300004152\|Ga0062386_100848203	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300004635\|Ga0062388_101809040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300005518\|Ga0070699_100464029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1149	Open in IMG/M
3300005561\|Ga0066699_10454987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	916	Open in IMG/M
3300005591\|Ga0070761_10179322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1249	Open in IMG/M
3300005610\|Ga0070763_10181598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300005610\|Ga0070763_10356394	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005921\|Ga0070766_10171487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1341	Open in IMG/M
3300006086\|Ga0075019_10354962	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300006102\|Ga0075015_101052730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300006162\|Ga0075030_101192270	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300006174\|Ga0075014_100096737	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300006174\|Ga0075014_100976842	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	512	Open in IMG/M
3300006354\|Ga0075021_10301330	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300006354\|Ga0075021_10521591	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300006854\|Ga0075425_102984119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300007255\|Ga0099791_10634033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300009038\|Ga0099829_10017761	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4812	Open in IMG/M
3300009093\|Ga0105240_12314231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300009098\|Ga0105245_10038556	All Organisms → cellular organisms → Bacteria → Proteobacteria	4252	Open in IMG/M
3300009156\|Ga0111538_12506459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300009174\|Ga0105241_10059805	All Organisms → cellular organisms → Bacteria → Proteobacteria	2931	Open in IMG/M
3300009641\|Ga0116120_1202263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300009644\|Ga0116121_1301557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300009697\|Ga0116231_10727643	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300009764\|Ga0116134_1036185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1935	Open in IMG/M
3300009839\|Ga0116223_10330044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300010046\|Ga0126384_10990800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300010339\|Ga0074046_10180503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1335	Open in IMG/M
3300010341\|Ga0074045_10682219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300012189\|Ga0137388_10361074	All Organisms → cellular organisms → Bacteria → Acidobacteria	1341	Open in IMG/M
3300012202\|Ga0137363_11552391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300012207\|Ga0137381_10839479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300012361\|Ga0137360_11074022	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300012506\|Ga0157324_1044077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300012922\|Ga0137394_10313194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1341	Open in IMG/M
3300012927\|Ga0137416_11111536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300012971\|Ga0126369_13457943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300014155\|Ga0181524_10346115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300014169\|Ga0181531_10609884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300015054\|Ga0137420_1294511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300015264\|Ga0137403_11258001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300015371\|Ga0132258_13665494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1049	Open in IMG/M
3300016750\|Ga0181505_10099300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646	Open in IMG/M
3300017822\|Ga0187802_10105651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300018008\|Ga0187888_1192447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300018023\|Ga0187889_10371417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300018038\|Ga0187855_10046783	All Organisms → cellular organisms → Bacteria	2704	Open in IMG/M
3300018042\|Ga0187871_10543555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300020004\|Ga0193755_1067286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1160	Open in IMG/M
3300021181\|Ga0210388_10910657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	758	Open in IMG/M
3300021181\|Ga0210388_11587932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300021420\|Ga0210394_11397590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300021433\|Ga0210391_11206558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300021474\|Ga0210390_11578099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300021478\|Ga0210402_11458479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300023056\|Ga0233357_1023085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300025498\|Ga0208819_1101344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300026312\|Ga0209153_1318433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300026446\|Ga0257178_1053007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300027545\|Ga0209008_1066531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300027568\|Ga0208042_1104766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300027587\|Ga0209220_1073285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300027587\|Ga0209220_1204280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300027616\|Ga0209106_1008601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2112	Open in IMG/M
3300027643\|Ga0209076_1051238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300027645\|Ga0209117_1137382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300027648\|Ga0209420_1039582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1448	Open in IMG/M
3300027655\|Ga0209388_1101985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300027727\|Ga0209328_10084083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	973	Open in IMG/M
3300027729\|Ga0209248_10065545	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300027737\|Ga0209038_10091881	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300027737\|Ga0209038_10269544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300027824\|Ga0209040_10121570	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300027853\|Ga0209274_10041310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2170	Open in IMG/M
3300027853\|Ga0209274_10332768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300027855\|Ga0209693_10183280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300027855\|Ga0209693_10328191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300027884\|Ga0209275_10464068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300027894\|Ga0209068_10231770	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300027903\|Ga0209488_10756854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	692	Open in IMG/M
3300028747\|Ga0302219_10287862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300029636\|Ga0222749_10759469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300029817\|Ga0247275_1177859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300029882\|Ga0311368_10618799	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300029910\|Ga0311369_11383222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300029913\|Ga0311362_10143676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2938	Open in IMG/M
3300029918\|Ga0302143_1032124	All Organisms → cellular organisms → Bacteria → Acidobacteria	1199	Open in IMG/M
3300029943\|Ga0311340_11321130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300029987\|Ga0311334_10476739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1001	Open in IMG/M
3300029998\|Ga0302271_10375838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300030004\|Ga0302186_10276441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300030051\|Ga0302195_10332959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300030053\|Ga0302177_10006000	All Organisms → cellular organisms → Bacteria → Acidobacteria	8331	Open in IMG/M
3300030503\|Ga0311370_10856336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1037	Open in IMG/M
3300030518\|Ga0302275_10367491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300030760\|Ga0265762_1058940	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300030878\|Ga0265770_1062513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300031720\|Ga0307469_10954391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	798	Open in IMG/M
3300031753\|Ga0307477_10285610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1140	Open in IMG/M
3300031754\|Ga0307475_11047022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300032180\|Ga0307471_101729627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300032180\|Ga0307471_102710704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300032180\|Ga0307471_103263833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300032782\|Ga0335082_10433256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1178	Open in IMG/M
3300032783\|Ga0335079_10320011	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300032898\|Ga0335072_10526309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1215	Open in IMG/M
3300032898\|Ga0335072_11758405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300033402\|Ga0326728_10151874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2507	Open in IMG/M
3300034163\|Ga0370515_0446916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.80%
Host-Associated	Host-Associated	6.20%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.44%
Aquatic	Environmental → Aquatic	26.36%
Plants	Host-Associated → Plants	6.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.81%
Freshwater	Environmental → Aquatic → Freshwater	20.16%
Peat	Environmental → Terrestrial → Peat	11.63%
Sediment	Environmental → Aquatic → Sediment	6.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.55%
Peat Moss	Host-Associated → Plants → Peat Moss	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.78%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	20.16%
Loam	Environmental → Terrestrial → Soil → Loam	17.05%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	11.63%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	16.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.28%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.63%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	11.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.43%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.33%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.55%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	10.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	6.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.20%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.10%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.10%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.10%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.55%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.55%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.55%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.78%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.78%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009697	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fd - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012506	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.old.040610	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300025498	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029913	III_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029918	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_1	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029955	II_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300029998	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N1_1	Environmental	Open in IMG/M
3300030004	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_1	Environmental	Open in IMG/M
3300030051	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_2	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_101970312	3300000567	Peatlands Soil	MRIFLLAGVIVAFTALCAFAQQPFLEARQWTTLRDEASGAAPYENLRYLTGLHRVPTTAAYEQAAQFVLQRAREYGLADAHSEQFPIDGTKRY
JGI12649J13570_10086292	3300001175	Forest Soil	MRNFGRFCLILVFFAPCALGQQPFLSVPQWRTLRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFILQRAHEYGLADARSEQYP
JGI12635J15846_101531722	3300001593	Forest Soil	MTIYFVLRICERKCQCYSRYLNHMRIRRFVFFFIIVTTLGAFGQRPFLDARQWTTLRNESSGAAPYENLRYLTTLHRVPATADFDQAAQFILQRASDYGLADAHSEQFAIDGTKPYGLMRSYLG
JGI12635J15846_109001602	3300001593	Forest Soil	MRNLRLICLFVGFSTLCAFAQQPFLTASQWTALRDESNGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAKEYGLSDAHSEQFPID
JGIcombinedJ26739_1009584732	3300002245	Forest Soil	MRILRWVCSFLALTSFCVFGQQPFLSVAQWSALRDESSGAAPYENLRYLTGLHRVPATPEFEQAAQFVLQRARDYGLADAHSEQFP
JGI25613J43889_100801211	3300002907	Grasslands Soil	MRSLRLTCSFVAFTTLCAIAQQPFLSVRQWTELRDESSGAAPYENLRYLAGLHRVPATPEFDQAAQFILQRAREYGLADAHSEQFPIDGARHYG
JGIcombinedJ51221_102804321	3300003505	Forest Soil	MRNFGLLCLVIVFFALCAFGQQPFLSIREWTMLRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFILQRAREYGLADAHSEQFPIDGNKNYGLMRSYLGWTVEEGRLWEMRPQHI
Ga0062384_1013804622	3300004082	Bog Forest Soil	MRLLALICSFVILATLCAFGQQPFLDARQWTALRDESSGAAPYENLRYLTTLHRVPATAEFDQAAQFILQRAHEYGLTDAHSEQFPIDGVKQYGLMRSYLGWTVEDAR
Ga0062387_1012476671	3300004091	Bog Forest Soil	MHSFRPICCFLVVLTTIFAFGQAFGQQPFLSAPQWVALRDESSGAAAYENLRYLTGLHRVPATPEFDRAAQFVLQRTREYGLADAHSEQFPI
Ga0062387_1016051161	3300004091	Bog Forest Soil	MRNLRLICLFIALTALRTFGQQPFLSVHQWTALRDESNGTAPYENLRYLTRLHRVPATPDFDQAARFVLQRAHEYGLADAHSEEFPIDGAKQYG
Ga0062389_1016584322	3300004092	Bog Forest Soil	MRDVLLILTIVVLNLCAFGQQPFLNTQQWTALRDESNGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAHEYGLADAHSEQFPIDGVKNYGLMRS
Ga0062389_1027730722	3300004092	Bog Forest Soil	MRIFRLLCFFIAFTSLCALGQEPFLDARQWTALRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSEQFPIDGAKRYGLMRSYLAWTVEEARLWE
Ga0062389_1030133792	3300004092	Bog Forest Soil	MRDLLLILTVVVLDLFAFGQQPFLNARQWTALRDESNGAAPYENLRLLTGLHRVPATPEFDQAAQFVLQRAHEYGLADAHSEQFPIDGVKNYGLMRS
Ga0062389_1040150491	3300004092	Bog Forest Soil	MRIFRLVCFCITFISLCAFGQQPFLDARQWAALRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSEQFPIDGTKHYGLMRSYLAWTVEEARLWE
Ga0062389_1046913211	3300004092	Bog Forest Soil	MRHICLTYFVVSFATFFALAQQPFLDPHQWTALRDESNGAAPYENLRYLTTLHRVPATPQFEQAAQFILQRAREYGLSDAHAEEFPIDGSKSYGLMRSYLGWSVE
Ga0062386_1008482033	3300004152	Bog Forest Soil	MRTFLLIGGIVALTTLSAFGQQPFLGIRQWTALRDESSGAAPYENLRYLTGLHRVATTADYEQAAQFVLQRAREYGLADAHSEQFPIDGAKHYGLMRSYLAWTVEEARLWE
Ga0062388_1018090402	3300004635	Bog Forest Soil	MRDLLLILTVVVLDLFAFGQQPFLNARQWTALRDESNGAAPYENLRLLTGLHRVPATPEFDQAAQFVLQRAHEYGLADAHSEQFPIDGVKNYGLMRSY
Ga0070699_1004640292	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRSLICFLIAFTTFFAFGQQPFLSIHQWTALRDESSGAAPYENLRYLTGLHRVPATAAFDQAAQFVLQRAREYGLADAHSEQFPIDGTRHYGL
Ga0066699_104549871	3300005561	Soil	MTGARIFLVLFILAVALCSAQEPFLTSAQWIAIRNESSGAAPYENLRYLTRLHRVPATAEFDQATQFMLQRAREYGLAEAHSEQFPIDGTRQYGLMRSYLSWSVEAGRLW
Ga0070761_101793222	3300005591	Soil	MRNLRLICLFVGFSTLCAFAQQPFLTATQWGALRDESNGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAKEYGLSDAHSEQFPIDGSKNYGLMRSYLAW
Ga0070763_101815981	3300005610	Soil	MRNLRLICLFVGFSTLCAFAQQPFLTATQWGALRDESNGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAKEYGLSDAHSEQFPIDGSKNYGLMRSY
Ga0070763_103563941	3300005610	Soil	MRSLRLICFVITFTTLCAFAQQPFLSSSQWTALRGESSGAAPYENLRYLTTLHRVPATPEFDQAAAFMLQRAREYGLADAHSEQFP
Ga0070766_101714872	3300005921	Soil	MRNFGLLCLVIVFFALCAFGQQPFLSIREWTMLRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFILQRAREYGLADAHSEQFPIDGNKNYGLMRSYLGWTVEEGRLWE
Ga0066790_102197232	3300005995	Soil	MRSFRLIFSFVFLVTLCASGQQPFLSTHEWATLRDEASGAAPYENLRYLTGLHRVPATPEFEQAAEFVLQRAHEYGLTDAHSEQFAIDGKKNYGLMRSYLAWTVEEARLWEVRPEHLL
Ga0075019_103549622	3300006086	Watersheds	MRTFCLLSLAFAITMLFPIGPAFAQQPFLSAGQWTALRDESNGAAPYENLRYLTTLHRVPATAQFDQAANFILQRAREYGLADAHSEQFPIDGTKTYGLMRSYLGWTVEEAR
Ga0075015_1010527301	3300006102	Watersheds	MRIFRVICFLLAITALFPLVHAFAQQPFLTGRQWIVLRDESNGAAPYENLRYLTGLHRVPSTAQFDQAANFILQRAREYGLADAHSEQFPIDGTKHYGLMRSY
Ga0075030_1011922702	3300006162	Watersheds	MRRICLISLFIAFISLCAFAQKPFLTVQQWTALRDESNGAVPYENLRYLTSLHRVPATADYDQAAQFVLQRAREYGLADAHSEQFPIDGTKQYGLMRSYLAWSVEE
Ga0075014_1000967371	3300006174	Watersheds	MRPLCLICFVTSLTLFSFGQQPFLGAHQWTVLRDESSGAAPYENLRYLTGLHRVPATADFDQAAQFVLQRAREYGLADAHSEQFPIDGTKPYGLMRSYLAWTVDEARLWEVRPQH
Ga0075014_1009768421	3300006174	Watersheds	MRRLHLLFVVFTPFFALAQQPFLDAHQWSALRDESSGAAPYENLRYLAGLHRVPATADFDQAAQFVLQRAREYGLTDVHSEQFPIDGERKYGLMRSYLAWT
Ga0075021_103013302	3300006354	Watersheds	MNTVRVICFILVLGGLSAVAQQPFLPAHQWTALRDESGGTAPYENLRYLTGLHRIPATADFDQAAQFILQRAREYGLTDVHGEQFPIDGARHYGLMRSYL
Ga0075021_105215912	3300006354	Watersheds	MKNLRLTCILLALSCAGAFAQQPFLPAKQWLALRKESNGAVPYENLRYLTTLHRVPATADFDQAAQFVLQRAREYGLTDAHSEQFPIDGTKPYGLMRSYLAWTVEEAR
Ga0075425_1029841192	3300006854	Populus Rhizosphere	MPSFRLVCLLALASVCAYTQEPFLSTRQWAAIRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFMLQRVREYRLADAHSEQFPIDGTKTYGLMRSYL
Ga0099791_106340331	3300007255	Vadose Zone Soil	MPDLRLVCLLALVSVCAYAQEPFLSTRQWVAIRDESSGAAPHENLRSITGLHRVPATPEFDQAAQFILEKARDYGLADAHSEQFPIDGTKTYGLMRSYLGWN
Ga0099829_100177611	3300009038	Vadose Zone Soil	MYTLRLIFLLAVSSISVFAQEPFLSTRQWAAIRDESSGAAPYENLRYLTGLHRVPATAEFDQAAQFMLQKAREYGLADAHSEQYSIDGTKTYGLMRSYLGWNVEGATLWEV
Ga0105240_123142311	3300009093	Corn Rhizosphere	MLRTILATVLLLSAATFALAQQPFLSSEQWIKLRDEASGTAPYENLRYLTRLHRVPATAEFDQAAQFVLQKAREYGLAEIGSEQFPIDGKTPYGLMRSYLGWTVEAGQLWE
Ga0105245_100385565	3300009098	Miscanthus Rhizosphere	MNPLCVTIFLVVFQASAAFAQQPFLPTSQWIALRDESNGAAPYENLRYLTGLHRVPATTDFDQASQFVLQRAREYGLSDAHSEQFPIDGTKTYGLMRSYFGWKVEE
Ga0111538_125064591	3300009156	Populus Rhizosphere	MNPLRVTIFLLIFHVSTVFAQQPFLPANQWIALRDESNGAAPYENLRYLTGLHRVPATADFDQAAQFVLQRAREYGLSDAHSEQFSVDGTKAYGLMRSYF
Ga0105241_100598051	3300009174	Corn Rhizosphere	MNPLCVTIFLVVFQASAAFAQQPFLPTSQWIALRDESNGAAPYENLRYLTGLHRVPATTDFDQASQFVLQRAREYGLSDAHSEQFPIDGTKTYGLMRSY
Ga0116221_14126282	3300009523	Peatlands Soil	MRSFCLICFLLAFTTLCAFGQQPFLDTHQWAALRDESSGAAPYENLRYLTGLHRVPATPEFDQAAHFVLQRALEYGLADAHS
Ga0116120_12022632	3300009641	Peatland	MRTFPRVCFFLALATLCAFGQQPFLSATQWTALRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSEQFPIDGSKNYGLMRSYLAWTVE
Ga0116121_13015572	3300009644	Peatland	MRSPGVRRFLIVLTVFFSLEQAFAQQPFLNTQQWTALRDESNGAAPYENLRYLTSLHRVPSTAQYDRAADFILQRAREYGLSDAHSEQFTIDGTKTYGLMRSYLGWNVEEARLWE
Ga0116231_107276431	3300009697	Host-Associated	LITCLWVAEAAPAQQPFLTEAQWAALRDEASGSAPLENLRVLTGLHRVPATPQFDQAADYMLQQTKAYGLDDAHAEQFPIDGQIHYGLMRSHLAWHVESAQLWESEPQHMLI
Ga0116134_10361851	3300009764	Peatland	MRSFRLISCFVAFTTLCASGQQPLLSVRQWTALRDESSGAAAYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSEQFPIDGAR
Ga0116223_103300441	3300009839	Peatlands Soil	MRSFCLICFLLAFTTLCAFGQQPFLDTHQWAALRDESSGAAPYENLRYLTGLHRVPATPEFDKAAQFVLQRAREYGLADAHSEQFPIDGTKNYGLMRSYLAW
Ga0126384_109908002	3300010046	Tropical Forest Soil	MRRVLVFLLPLIASASIALAQEPFLSTKQWASLRDESNGAAPYENLRYLTTLHRVPATAAFDQAADFILQRAREYGLTDAHSEQFPIDGTKTYGLMRSYLGWTV
Ga0074046_101805032	3300010339	Bog Forest Soil	MRIFRLICPLVFLTTLYAFGQRPFLSAAQWSALRDESSGSSPYENLRYLTGLHRVPATPEFDQAAQFVLQRAHEYKLTDAHSEQFPIDGTKNYGLMRSYLAWTVEEARLWEVHPQHLL
Ga0074045_106822191	3300010341	Bog Forest Soil	MRSLRLICFFVAFTTLCAFGQQPFLDSRQWTALRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSEQFPIDGVKHY
Ga0137388_103610741	3300012189	Vadose Zone Soil	MRSLICFFIALTTLCAFAQQPFLGVREWAALRDESNGAAPYENLRYLTGLHRVPATADFDLAAQFVLQRAHEYGLVDAHSEQFPID
Ga0137363_115523912	3300012202	Vadose Zone Soil	MRTVRLFCFLVALLPLRAVSQAPFLTSAQWTVLRDESSGNVPYENLRYLTGVHRVPATPEFDQAAQFVLQRAQEYGLSDAHSEQFPIDGKKT
Ga0137381_108394791	3300012207	Vadose Zone Soil	MPKLRLVCLLALASVCAYTQEPFLSTRQWAAIRDESSGVAPYENLRYLTGLHRVPATPEFDQAAQFMLQKVREYRLADAHSEQFPIDGTKTYGLMRSYLGWNVE
Ga0137360_110740222	3300012361	Vadose Zone Soil	MPNLRLVCLLALASVCAYTQEPFLSTRQWAAIRDESSGAAPYENLRYLTVLHRVPATPEFDQAAQFMLQKAREYGLADAHSEQFPIDGTKTYGLMPPYLGWKVEAATLWEVNPQ
Ga0157324_10440771	3300012506	Arabidopsis Rhizosphere	MNSLCVTIFLVVFQASAAFAQQPFLPTSQWIALRDESNGAAPYENLRYLTGLHRVPATTDFYQAAQFVLQRAREYGLSDAHSEQFPIDGTKTYGLMRSYFGWKVEEGS
Ga0137394_103131941	3300012922	Vadose Zone Soil	MHSVRVLFLLTLASSCALAQEPFLPKPQWTAIRNESSGAAPYENLRYLSTLHRVPATPEFDQAAQFMLQRAREYGLADAHSEQFPIDGTKTY
Ga0137416_111115362	3300012927	Vadose Zone Soil	MRSLICFLIALTTLCAFAQQPFLGVREWTALRDESSGAAPYENLRYLTGLHRVPATAAFDQAAQFMLQRAHEYGLADAQSEQFPIDGAKRYGLMRSYLAWTVEEARLWEIRPQ
Ga0126369_134579431	3300012971	Tropical Forest Soil	MRSLCLTGFLLALSSLSALTQQPFLSPHQWAALRDESSGAAPYENLRYLTSLHRVPATKEFDQVAQFVLQRAREYGLADVHSEQFPIDGTRTYGLMRSYLGWTVEAASLWEVRP
Ga0181524_103461152	3300014155	Bog	MRTLHIVCFVLAFTTFCAFGQQPFLDVHQWTALGDDSSGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSERFPID
Ga0181531_106098841	3300014169	Bog	MRNLRLICLFVGFSTLCAFAQQPFLTAPQWAALRDESNGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAKEYGLSDAHSEQFP
Ga0182019_108362602	3300014498	Fen	MRSFRLICSFLVFTTAFAFGQQPFLATPQWTALRDESNGAAPYENLRYLTTLHRVPATADFDQAAQFVVQRAHEYGLADAHS
Ga0137420_12945111	3300015054	Vadose Zone Soil	MRTIGRLCFLLALLPLRALSQAPFLTTIQWTVLRDESSGNVPYENLRYLTGLHRVPATPEFDQAARFMLQRAQEYGLSDAHNEQFPIDGKKTYGLMRSYLAWAVEDGRCRLW
Ga0137403_112580012	3300015264	Vadose Zone Soil	LLFASLIAAGGCVLWGNLACAEQPFLPAAQWNALRDAASGAAPYENLRFLTTLHRVPATAQFDQAADFMLAKALEYGLKDAHAEQFPIDGVTPYGLMRSHLAW
Ga0132258_136654941	3300015371	Arabidopsis Rhizosphere	MNSLCVTIFLVVFQASAAFAQQPFLPTSQWIALRDESNGAAPYENLRYLTGLHRVPATTDFDQAAQFVLQRAREYGLSDAHSEQFPIDGTKTYGLMRSYF
Ga0181505_100993001	3300016750	Peatland	MRTFPRVCFFLALATLCAFGQQPFLSATQWTALRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSEQFPIDGSKNYGLMRSYLAWTVEEARLWEVRP
Ga0187802_101056511	3300017822	Freshwater Sediment	VLAFTTFCAFGQQPFLNVHLWTALRDESSGAAPYENLRFLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSEQFAIDGSKTYGLM
Ga0187888_11924472	3300018008	Peatland	MRSFRLICFLVAFATLCAFGQQPFLDARQWTALRDESGGAAPYENLRYLTGLHRVPATPEFDEAAQFVLQRAREYGLSDAHSEQFPID
Ga0187889_103714171	3300018023	Peatland	MRSPGVRRFLIVLTVFFSLEQAFAQQPFLNTQQWTALRDESNGAAPYENLRYLTSLHRVPSTAQYDRAADFILQRAREYGLSDAHSEQFTIDGTKTYGLMRSY
Ga0187855_100467833	3300018038	Peatland	MRSFHLTCFFVSLTTLFAFGQQPFLSESQWMALRDESGGAASYENLRYLTGLHRVPATPEFDEAAQFVLQRAQEYGLADARAEQFPIDGRRQYGLMRSYLGWTVEEA
Ga0187871_105435551	3300018042	Peatland	MRTLHIVCFVLAFTTFCAFGQQPFLDVHQWTALGDDSSGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSERFPI
Ga0193755_10672863	3300020004	Soil	MHNLRLICLLTLAVCASAQEPFLSAPLWTAIRNESNGAAAYENLRYLSSIHRVPATAEFDQAAQFMLQKAREYGLADAHSEQFPIDGTKTYGLMRSYLGWTVEYATLWEVSPQHLL
Ga0210388_109106571	3300021181	Soil	VVFGELMRSFSQTFILFTFSALVALGQEPFLDAHQWTVLRDESNGAAPYENLRYLTGLHRVPATRDFDQAAQFMLQRAREYGLDDAHTEQFPIDGNKNYGLMRSYLGWS
Ga0210388_115879321	3300021181	Soil	MRPCLTTLVFTLASLTAVAQEPFLNTKQWTALRDESTGAPAYENLRYLTGLHRVPATPEFDQAAQFILQRAKEYGLTDAHSEQFPIDGAK
Ga0210394_113975902	3300021420	Soil	MRSLRLICFVITFTTLCAFAQQPFLSSSQWTALRGESSGAAPYENLRYLTTLHRVPATPEFDQAAAFMLQRAREYGLADAHSEQFPIDGTKTYGLM
Ga0210391_112065581	3300021433	Soil	VVFGELMRSFSRTFILFTFSALVALGQEPFLDAHQWTVLRDESNGAAPYENLRYLTGLHRVPATRDFDQAAQFMLQRAREYGLDDAHTEQFPIDGNKNY
Ga0210390_115780991	3300021474	Soil	MRSLRLICFVITFTTLCAFAQQPFLSSSQWTALRGESSGAAPYENLRYLTTLHRVPATPEFDQAAAFMLQRAREYGLADAHSEQFPIDGTKTYGLMRSYLAWTV
Ga0210402_114584791	3300021478	Soil	MLKLSLVKRWLICLAILFAATLAFSQQPFLPFDQWVKLRDEASGAAPYENLRYLTRLHRVPATPEFDQAAQFMLERAREYSLTDVQSEQFPVDGKTQYGLMRSYLGWTV
Ga0233357_10230852	3300023056	Soil	MRSLICFLIAFTTFSAFGQQPFLGTRQWTALRDESSGAAPYENLRYLTSLHRVPATADFEKAAEFVLQRAREYGLADAHSEQFAIDGTRHYGL
Ga0208819_11013442	3300025498	Peatland	MRTFPRVCFFLALATLCAFGQQPFLSATQWTALRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSEQFPIDGSKNYGLMRS
Ga0209153_13184331	3300026312	Soil	MHPVRVLRFILILIFIFIFTAVASVCVLAQEPFLSTQQWGVIRDESSGAAPYENLRYLTGLHRVPATPEFDRAAEFMLQKAREYGLSDVRSEQFPI
Ga0257178_10530072	3300026446	Soil	MRGLICFLIALTTLSAFGQQPFLGLHEWTALRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFILQRAREYGLADAHSEQFAIDGTKRYGLMRSY
Ga0209008_10665311	3300027545	Forest Soil	MRTLCLILSMVWIALGAFGQAPFLNTRQWTALRDESSGAAPYENLRYLTTLHRVPATAEFDQAAQFVLQRAKEYGLTDAHSEQFPVDGIKQYGLMRSYLGWTVEDARLWEVRPQHV
Ga0208042_11047662	3300027568	Peatlands Soil	MRSFCLICFLLAFTTLCAFGQQPFLDTHQWAALRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSEQFPIDGTKNY
Ga0209220_10732852	3300027587	Forest Soil	MRSLICFLIALTTLCAFAQQPFLGVREWTALRDESSGAAPYENLRYLTGLHRVPATAAFDQAAQFVLQRAREYGLASAHSEQFPIDGARHYGLMRSYLAWTVEEARLWEIRPQ
Ga0209220_12042801	3300027587	Forest Soil	MRGLICFLIALTTLSAFGQQPFLGVREWTALRDESSGAAAYENLRYLTGLHRVPATAAFDQAAQFMLQRAREYGLADAHSEQFPIDGTRHYGLMRSYLAWTVEEARL
Ga0209106_10086011	3300027616	Forest Soil	MRSLRLTCSFVAFTTLCAIAQQPFLSVRQWTELRDESSGAASYENLRYLAGLHRVPATPEFDQAAQFILQRAREYGLADAHSEQFPIDGAKRYGLMRSYLAWT
Ga0209076_10512381	3300027643	Vadose Zone Soil	MRSLRLTCSFVAFTTLCAFGQQPFLSVRQWTALRDESSGAAPYENLRYLAGLHRVPATPEFDQAAQFILQRAREFGLAEAHSEQFPIDGTRSYGLMRSYLAWTVDEARLWEARPQH
Ga0209117_11373821	3300027645	Forest Soil	MRGLICFLIALTTLSAFGQQPFLGVREWTALRDESSGAAAYENLRYLTGLHRVPATAAFDQAAQFMLQRAREYGLADAHSEQFPIDGTKHYGLMRSYLGWTVEEAR
Ga0209420_10395822	3300027648	Forest Soil	MRNFRRFCLILVFFAPCALGQQPFLSVPQWRTLRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFILQRAHEYGLADARSEQYPIDGSKNYGLMRSY
Ga0209388_11019851	3300027655	Vadose Zone Soil	MHSLRLICVLAFASVCVYAQEPFLSTRQWVAIRNESNGAAPFENLRYLSGLHRVPATPEFDQAAQFMLQKAREYGLADAYSEQYPIDGTKTYGLMRSYLGWNVEAATLW
Ga0209328_100840832	3300027727	Forest Soil	MRGLICFLIALTTLSAFGQQPFLGVREWTALRDESSGAAAYENLRYLTGLHRVPATAAFDQAAQFMLQRAREYGLADAHSEQFPIDGTRHYGLMRSYLAWTVEEA
Ga0209248_100655452	3300027729	Bog Forest Soil	MRRTVLLLFILTFTRLLAFGQYPFLNAQQWTALRDESSGTSPYENLRYLTTLHRVPATADFDQAAQFILQRAREYGLTDAHSEQFPVDGVKPYGLMRSYLAWTVWRV
Ga0209038_100918812	3300027737	Bog Forest Soil	MHSFRPICCFLVVLTTIFAFGQAFGQQPFLSAPQWVALRDESSGAAAYENLRYLTGLHRVPATPEFDRAAQFVLQRTREYGLADAHSEQFPIDGTKTYGLM
Ga0209038_102695442	3300027737	Bog Forest Soil	FLCRCYPHTLMRRTVLLLFILTFTRLLAFGQYPFLNAQQWTALRDESSGTSPYENLRYLTTLHRVPATADFDQAAQFILQRAREYGLTDAHSEQFPVDGVKPYGLMRSYLAWTVWRV
Ga0209040_101215701	3300027824	Bog Forest Soil	MRIFRLICPLVFLTTLYAFGQRPFLSAAQWSALRDESSGSSPYENLRYLTGLHRVPATAEFDQAAQFVLQRAHEYKLTDAHSEQFPNCW
Ga0209274_100413102	3300027853	Soil	MRNLRLICLFVGFSTLCAFAQQPFLTATQWGALRDESNGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAKEYGLSDAHSEQFPIDGSKNYGL
Ga0209274_103327681	3300027853	Soil	MRNFGRLCLILVFFAPCALGQQPFLSLPQWRTLRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFILQRAHEYGLADARSEQYPIDGSKNYGLMRSYLGWKVEEGRLWEVHPQHI
Ga0209693_101832802	3300027855	Soil	MRNLRLICLFVGFSTLCAFAQQPFLTATQWGALRDESNGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAKEYGLSDAHSEQFPIDGSKNYGLMRSYLAWIVEEGRLW
Ga0209693_103281911	3300027855	Soil	MRSLRLICFVITFTTLCAFAQQPFLSSSQWTALRGESSGAAPYENLRYLTTLHRVPATPEFDQAAAFMLQRAREYGLADAHSEQFPI
Ga0209275_104640682	3300027884	Soil	MRHFPALCFLVAIVAITAIGATAQQPFLTPHQWTALRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSEQFPVDGSKQYGLMRSYLGWTV
Ga0209068_102317702	3300027894	Watersheds	MNTVRVICFILVLGGLSAVAQQPFLPAHQWTALRDESGGTAPYENLRYLTGLHRIPATADFDQAAQFILQRAREYGLTDVHGEQFPIDGARHYGLMRSYLSWTVEE
Ga0209488_107568542	3300027903	Vadose Zone Soil	MRILRFICFFTFFAALESFGQQPFLDAHQWTTLRDESSGTAAYENLRYLTTLHRVPATPEFDQAAQFILQRAREYGLSDAHSEQFEIDGTKPYG
Ga0302219_102878621	3300028747	Palsa	MRNLRLICLFVGFSTLCAFAQQPFLTASQWTALRDESNGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAKEYGLSDAHSEQFPIDG
Ga0222749_107594692	3300029636	Soil	MNMRLLCAFVLLGSVLAVSQQPFLDSHQWIALRDEASGAVPYENLSIHHAAARVPATAQFDDAAQFILQRAREYGLADVHAEQFPVDGKTQYGLMRSYFAWNRGK
Ga0247275_11778591	3300029817	Soil	MRSLRLICFFVCFTTLCAFAQQPFLGARQWAALRDESNGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSEQF
Ga0311368_106187992	3300029882	Palsa	MRSLCLISCLVVFTAFCAFGQQPFVSTSQWTALRDESSGVSAYENLRYLTTLHRVPATPEFDQAAQFILQRAKEYGLVEAHSEQF
Ga0311369_113832222	3300029910	Palsa	MRSVRLICLFAVSTTLCAFAQQPFLDARQWTALRDEASGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSE
Ga0311362_101436761	3300029913	Bog	MRTLRLLSWFLVCATCFAFAQQPFLTNPQWARLIDESNGAVPYENLRYLTTLHRVPATAQFEQAAQFILQRAREYGLSDAHTEEFPIDGTKTYGLMRSY
Ga0302143_10321241	3300029918	Bog	MRTLRLLLLFIALTALSSLAQQPFLSTQQWKALRDESSGAVPYENLRYLTTLHRVPATPQFEQAAQFILQRAKEYGLADAHTEE
Ga0311340_113211301	3300029943	Palsa	MRNLICVLVVCIAFSALGQQPFLGAQQWTALRDESSGAAPYENLRYLTGLHRVPATADFDQAAQFVLQRAREYGLADAHSEQFPIDGTKTYGLMRSYLGWTVEEARLWEIRPEH
Ga0311342_105714371	3300029955	Bog	MRTLRLLSCFLVFATCLSFAQQPFLTTPQWTALRDESNGAAPYENLRYLTTLHRVPATAQFDQAAQFILQRAREYGLSDA
Ga0311334_104767392	3300029987	Fen	MPSLRFLILLCVAGIAVAQEPYLSSTHWAAIRNESSGAAPYENLRYLTTLHRVPATKDFDQAAQFVLQKAREYGLADAHSEQFSIDGTKTYGLMRSYLGWNVEAGTLWEES
Ga0302271_103758382	3300029998	Bog	MRSFRLISLALVLQSVCALAQQPFLSTTQWTVLRDEASGAAPYENLRYLTGLHRVPATADYDQAAQFVLQRAREYGLADSHSEQFPIDGTKTYGLM
Ga0302186_102764411	3300030004	Bog	MRTLRLLLLFIALTALSSLAQQPFLSTQQWKALRDESSGAVPYENLRYLTTLHRVPATPQFEQAAQFILQRAKEYGLADAHTEEFPIDGSKSYG
Ga0302195_103329592	3300030051	Bog	MRTLRLLSWFLVCATCFAFAQQPFLTNPQWARLIDESNGAVPYENLRYLTTLHRVPATAQFEQAAQFILQRAREYGLSDAHTEEFPIDGTKTYGLMRSYLAWNV
Ga0302177_100060006	3300030053	Palsa	MRSLCLISCLVVFTAFCAFGQQPFVSTSQWTALRDESSGVSAYENLRYLTTLHRVPATPEFDQAAQFILQRAKEYGLVEAHSEQFPIDGVKTYGLMRSYLGWTVEEARLWEVRPDHI
Ga0311370_108563362	3300030503	Palsa	MRSVRLICLFAVSTTLCAFAQQPFLDARQWTALRDEASGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSEQFAIDGQKQYGLM
Ga0302275_103674911	3300030518	Bog	MRTLRLLSCFLVFATCLSFAQQPFLTTPQWTALRDESNGAAPYENLRYLTTLHRVPATAQFDQAAQFILQRAREYGLSDAHTEEFAIDGTKPYGLMRSYLAW
Ga0265762_10589402	3300030760	Soil	MRNFGLLCLVVTFSTLGSFGQQPFLSIRQWTMLRDESSGAAPYENLRYLTGLHRVPATPEFDQAAQFILQRAREYGLADARSEQFPIDGSKPYGLMRSYLGWTVEEGRLWEVR
Ga0265770_10625132	3300030878	Soil	MRSFSRTCILFTFSALVALGQEPFLDAHQWTVLRDESNGAAPYENLRYLTGLHRVPATRDFDLAAQFILQRAREYGLDDAHTEQFPIDGNKSYGLMRSYLGWAVEEGRLWEVRPQ
Ga0307469_109543911	3300031720	Hardwood Forest Soil	MRSLRLICFLIAFTTLYAFGQQPFLGVRQWTALRDESSGAAPYENLRYLTGLHRVPATADFDLAAQFVLQRAREYGLADAHSEQFPIDGTRHYGLMR
Ga0307477_102856101	3300031753	Hardwood Forest Soil	MRILRFICFFTVFAALESFGQQPFLDAHQWTTLRDESSGAAAYENLRYLTTLHRVPATPEFDQAAQFILQRAREYGLSDAHSEQFDIDGMKPYGLMRSYLGWTV
Ga0307475_110470221	3300031754	Hardwood Forest Soil	MRSLICLLLAFTALPAFGQQPFLGVREWTALRDESSGAAPYENLRYLTGLHRVPATPAFDQAAQFMLQRASEYGLADAHSEQFAIDGAKRYGLMRSYLAWTVEEARLWEIRPQHLL
Ga0307471_1017296272	3300032180	Hardwood Forest Soil	MRSLRLICFLIAFTTLYAFGQQPFLGVRQWTALRDESSGAAPYENLRYLTGLHRVPATADFDLAAQFVLQRAREYGLADAHSEQFPIDGTRHYGLMRSYLAWTVE
Ga0307471_1027107041	3300032180	Hardwood Forest Soil	MRSLICFFIVFITFSAFGQQPFLGVRQWTALRDESSGAAPYENLRYLTGLHRVPATADFDLAAQFVLQRAREYGLADAHSEQFPIDGTRHYGLMRSY
Ga0307471_1032638332	3300032180	Hardwood Forest Soil	MRSLICFLIAFTTLSAFGQQPFLSVREWTTLRDESSGAAPYENLRYLTGLHRVPATAEFDQAAQFMLQRAREYGLADAHSEQFPIDGTRHYG
Ga0335082_104332562	3300032782	Soil	MCFRFLCLLFFLTLLAPAQEPFLTTRQWTALREESNGAVPYENLRYLTTLHRVPATADFDQAAQFVLQRAREYGLADAHSEQFPIDGVRTYGLMRSYFSWSVEEGQ
Ga0335079_103200112	3300032783	Soil	MRTFRVLCVVLAVVLCNLLSAFGQQPFLTTHQWSALRDESNGAVSYENLRYVTTLHRVPATAAFDQAADFVLRRAREYGLAEAHSE
Ga0335072_105263092	3300032898	Soil	MVSLPQCYPPYLMRRFCVIFVLVITLCSPLRHAFAQQPFLTTHQWTALRDESNGAAPYENLRYLTTLHRVPATAQFDQAADFILQRAREYGLADAHSEQFPIDGTKTYGLMRS
Ga0335072_117584051	3300032898	Soil	MRTLGLNCAVGILVGLAAYGQQPFLNNHEWTALRDESSGAAPYENLRYLTRLHRVPATPDFDQAANFILERAREYDLTDAHSEQFSIDGKRTYGLMRSYFA
Ga0326728_101518743	3300033402	Peat Soil	MRNLHLVFLFVAFTALCAFGQQPFLGIHQWTVLRDESSGAAPYENLRYLTGLHRVPTTVDYEQAAQFVLQRAREYGLTDAHSEQFAI
Ga0370515_0446916_294_545	3300034163	Untreated Peat Soil	MRSVRLICLFAVSTTLCAFAQQPFLDARQWTALRDEASGAAPYENLRYLTGLHRVPATPEFDQAAQFVLQRAREYGLADAHSEQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F063963

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences