Metagenome / Metatranscriptome Family F064476

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064476
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	50 residues
Representative Sequence	MGQTRDEIAQNLAERLCWQVARRDDSRVARRLYRKQVVDGVYRLDEGALL
Number of Associated Samples	77
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.83 %
% of genes near scaffold ends (potentially truncated)	74.22 %
% of genes from short scaffolds (< 2000 bps)	82.03 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.906 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.469 % of family members)
Environment Ontology (ENVO)	Unclassified (34.375 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.312 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.59% β-sheet: 0.00% Coil/Unstructured: 56.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01436	NHL	2.34
PF00072	Response_reg	1.56
PF02211	NHase_beta	1.56
PF13359	DDE_Tnp_4	1.56
PF01609	DDE_Tnp_1	1.56
PF02371	Transposase_20	1.56
PF00005	ABC_tran	1.56
PF13546	DDE_5	1.56
PF00158	Sigma54_activat	1.56
PF13358	DDE_3	1.56
PF02881	SRP54_N	1.56
PF00343	Phosphorylase	0.78
PF04255	DUF433	0.78
PF13847	Methyltransf_31	0.78
PF00534	Glycos_transf_1	0.78
PF04055	Radical_SAM	0.78
PF05598	DUF772	0.78
PF01042	Ribonuc_L-PSP	0.78
PF07681	DoxX	0.78
PF01593	Amino_oxidase	0.78
PF13565	HTH_32	0.78
PF05199	GMC_oxred_C	0.78
PF04972	BON	0.78
PF02954	HTH_8	0.78
PF12728	HTH_17	0.78
PF00211	Guanylate_cyc	0.78
PF00589	Phage_integrase	0.78
PF07929	PRiA4_ORF3	0.78
PF00528	BPD_transp_1	0.78
PF13551	HTH_29	0.78
PF13692	Glyco_trans_1_4	0.78
PF00239	Resolvase	0.78
PF02599	CsrA	0.78
PF13181	TPR_8	0.78
PF08352	oligo_HPY	0.78
PF13649	Methyltransf_25	0.78
PF13683	rve_3	0.78
PF09363	XFP_C	0.78
PF08241	Methyltransf_11	0.78
PF01548	DEDD_Tnp_IS110	0.78
PF13340	DUF4096	0.78
PF03400	DDE_Tnp_IS1	0.78
PF09360	zf-CDGSH	0.78
PF13411	MerR_1	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.34
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	1.56
COG3293	Transposase	Mobilome: prophages, transposons [X]	1.56
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	1.56
COG5421	Transposase	Mobilome: prophages, transposons [X]	1.56
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	1.56
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	1.56
COG0058	Glucan phosphorylase	Carbohydrate transport and metabolism [G]	0.78
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.78
COG1551	sRNA-binding carbon storage regulator CsrA	Signal transduction mechanisms [T]	0.78
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	0.78
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.78
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.78
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.78
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.78
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.78
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.78
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.91 %
Unclassified	root	N/A	46.09 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.91 %
Unclassified	root	N/A	46.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.91 %
Unclassified	root	N/A	46.09 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.38 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.69 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	3.91 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	3.12 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	5.47 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.91 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	3.91 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	3.12 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.34 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	4.69 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.91 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.91 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.34 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.34 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.78 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.78 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.78 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.78 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	4.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.91 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.34 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.78 %
Woeseiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae	0.78 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.78 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	4.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.34 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.78 %
unclassified Woeseiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.78 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	4.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.34 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Woeseiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium	0.78 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.78 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.09 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	4.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3.91 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.34 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.56 %
Woeseiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium	0.78 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.78 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.78 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003890\|Ga0063162_1002741	All Organisms → cellular organisms → Bacteria	66418	Open in IMG/M
3300004463\|Ga0063356_104153968	Not Available	623	Open in IMG/M
3300005467\|Ga0070706_101865425	Not Available	546	Open in IMG/M
3300005518\|Ga0070699_102042645	Not Available	524	Open in IMG/M
3300005713\|Ga0066905_101883169	Not Available	553	Open in IMG/M
3300005937\|Ga0081455_10410320	Not Available	937	Open in IMG/M
3300005981\|Ga0081538_10189716	Not Available	865	Open in IMG/M
3300005981\|Ga0081538_10298213	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300006844\|Ga0075428_102113098	Not Available	582	Open in IMG/M
3300006847\|Ga0075431_101416557	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	654	Open in IMG/M
3300006853\|Ga0075420_101912118	Not Available	507	Open in IMG/M
3300006880\|Ga0075429_101343493	Not Available	623	Open in IMG/M
3300009081\|Ga0105098_10041890	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300009137\|Ga0066709_102245025	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300009147\|Ga0114129_11643685	Not Available	785	Open in IMG/M
3300009156\|Ga0111538_10254621	All Organisms → cellular organisms → Bacteria	2222	Open in IMG/M
3300009157\|Ga0105092_10208364	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300009157\|Ga0105092_10393433	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	788	Open in IMG/M
3300009157\|Ga0105092_10441204	Not Available	743	Open in IMG/M
3300009157\|Ga0105092_10447034	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	738	Open in IMG/M
3300009157\|Ga0105092_10447892	Not Available	737	Open in IMG/M
3300009157\|Ga0105092_10727290	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	578	Open in IMG/M
3300009157\|Ga0105092_10908435	Not Available	520	Open in IMG/M
3300009162\|Ga0075423_10810817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	990	Open in IMG/M
3300009168\|Ga0105104_10088416	All Organisms → cellular organisms → Bacteria → Proteobacteria	1668	Open in IMG/M
3300009168\|Ga0105104_10217610	Not Available	1039	Open in IMG/M
3300009444\|Ga0114945_10011072	All Organisms → cellular organisms → Bacteria	4822	Open in IMG/M
3300009444\|Ga0114945_10020471	Not Available	3528	Open in IMG/M
3300009444\|Ga0114945_10560457	Not Available	691	Open in IMG/M
3300009691\|Ga0114944_1096078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1128	Open in IMG/M
3300009817\|Ga0105062_1055050	Not Available	734	Open in IMG/M
3300009840\|Ga0126313_11547228	Not Available	552	Open in IMG/M
3300010029\|Ga0105074_1086376	Not Available	583	Open in IMG/M
3300010038\|Ga0126315_11189687	Not Available	518	Open in IMG/M
3300010043\|Ga0126380_10064553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	2047	Open in IMG/M
3300010043\|Ga0126380_11017206	Not Available	699	Open in IMG/M
3300010043\|Ga0126380_11665543	All Organisms → cellular organisms → Bacteria → Proteobacteria	572	Open in IMG/M
3300010046\|Ga0126384_10143654	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	1828	Open in IMG/M
3300010047\|Ga0126382_10368085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Woeseiaceae → unclassified Woeseiaceae → Woeseiaceae bacterium	1109	Open in IMG/M
3300010047\|Ga0126382_10847808	Not Available	785	Open in IMG/M
3300010047\|Ga0126382_10955844	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	747	Open in IMG/M
3300010047\|Ga0126382_12484854	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300010359\|Ga0126376_11862884	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300010362\|Ga0126377_10428432	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300010362\|Ga0126377_11172392	Not Available	838	Open in IMG/M
3300010362\|Ga0126377_12972607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300010366\|Ga0126379_13656485	Not Available	515	Open in IMG/M
3300010999\|Ga0138505_100059545	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300012200\|Ga0137382_10215875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1322	Open in IMG/M
3300012200\|Ga0137382_10633804	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	764	Open in IMG/M
3300012204\|Ga0137374_10252438	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300012208\|Ga0137376_10300349	All Organisms → cellular organisms → Bacteria → Proteobacteria	1393	Open in IMG/M
3300012350\|Ga0137372_10255025	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300012353\|Ga0137367_10028569	All Organisms → cellular organisms → Bacteria → Proteobacteria	4314	Open in IMG/M
3300012355\|Ga0137369_10090956	All Organisms → cellular organisms → Bacteria	2530	Open in IMG/M
3300012356\|Ga0137371_10165279	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300012357\|Ga0137384_10219544	All Organisms → cellular organisms → Bacteria	1589	Open in IMG/M
3300012357\|Ga0137384_10477427	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1025	Open in IMG/M
3300012357\|Ga0137384_10862690	Not Available	730	Open in IMG/M
3300012357\|Ga0137384_11535902	Not Available	515	Open in IMG/M
3300012358\|Ga0137368_10062914	All Organisms → cellular organisms → Bacteria → Proteobacteria	3054	Open in IMG/M
3300012358\|Ga0137368_10372743	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300012358\|Ga0137368_10406983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300012358\|Ga0137368_10845567	Not Available	563	Open in IMG/M
3300012360\|Ga0137375_10495629	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300012360\|Ga0137375_10561799	Not Available	958	Open in IMG/M
3300012360\|Ga0137375_11084404	Not Available	623	Open in IMG/M
3300012685\|Ga0137397_10104671	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2077	Open in IMG/M
3300012685\|Ga0137397_10177078	All Organisms → cellular organisms → Bacteria	1584	Open in IMG/M
3300012922\|Ga0137394_10066215	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3003	Open in IMG/M
3300012922\|Ga0137394_10162930	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300012922\|Ga0137394_10909031	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	734	Open in IMG/M
3300012929\|Ga0137404_10399291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1212	Open in IMG/M
3300012929\|Ga0137404_11424039	Not Available	640	Open in IMG/M
3300012929\|Ga0137404_12112906	Not Available	526	Open in IMG/M
3300012930\|Ga0137407_10175216	All Organisms → cellular organisms → Bacteria	1911	Open in IMG/M
3300012930\|Ga0137407_10175359	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1910	Open in IMG/M
3300012930\|Ga0137407_11940585	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	562	Open in IMG/M
3300012948\|Ga0126375_10902970	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300015245\|Ga0137409_10228235	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300015372\|Ga0132256_103319851	Not Available	541	Open in IMG/M
3300018054\|Ga0184621_10262196	Not Available	614	Open in IMG/M
3300018056\|Ga0184623_10031339	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	2396	Open in IMG/M
3300018056\|Ga0184623_10304629	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	719	Open in IMG/M
3300018063\|Ga0184637_10443592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	765	Open in IMG/M
3300018075\|Ga0184632_10307780	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300018076\|Ga0184609_10195971	Not Available	940	Open in IMG/M
3300018077\|Ga0184633_10400219	Not Available	686	Open in IMG/M
3300018082\|Ga0184639_10237386	Not Available	964	Open in IMG/M
3300018422\|Ga0190265_11453995	Not Available	799	Open in IMG/M
3300018469\|Ga0190270_11854339	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300018469\|Ga0190270_11928318	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	648	Open in IMG/M
3300018469\|Ga0190270_12180274	Not Available	614	Open in IMG/M
3300018469\|Ga0190270_13280526	Not Available	513	Open in IMG/M
3300019259\|Ga0184646_1321677	All Organisms → cellular organisms → Bacteria	3457	Open in IMG/M
3300019259\|Ga0184646_1327659	All Organisms → cellular organisms → Bacteria	1536	Open in IMG/M
3300019259\|Ga0184646_1407100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	793	Open in IMG/M
3300019789\|Ga0137408_1435254	All Organisms → cellular organisms → Bacteria	4914	Open in IMG/M
3300020170\|Ga0179594_10016768	Not Available	2158	Open in IMG/M
3300020170\|Ga0179594_10188374	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300020170\|Ga0179594_10293403	Not Available	615	Open in IMG/M
3300021073\|Ga0210378_10190135	Not Available	786	Open in IMG/M
3300022195\|Ga0222625_1131691	Not Available	1527	Open in IMG/M
3300022563\|Ga0212128_10121604	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300022563\|Ga0212128_10181459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1347	Open in IMG/M
3300022563\|Ga0212128_10753935	Not Available	581	Open in IMG/M
3300025149\|Ga0209827_10218714	Not Available	566	Open in IMG/M
3300027722\|Ga0209819_10140790	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	844	Open in IMG/M
3300028878\|Ga0307278_10103933	All Organisms → cellular organisms → Bacteria	1277	Open in IMG/M
3300028878\|Ga0307278_10470090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	550	Open in IMG/M
3300030006\|Ga0299907_11244223	Not Available	532	Open in IMG/M
3300030619\|Ga0268386_10061521	All Organisms → cellular organisms → Bacteria	2946	Open in IMG/M
3300030990\|Ga0308178_1026367	Not Available	962	Open in IMG/M
3300031548\|Ga0307408_101003830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300031731\|Ga0307405_12130731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	504	Open in IMG/M
3300032002\|Ga0307416_101092620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	902	Open in IMG/M
3300032004\|Ga0307414_11934741	Not Available	550	Open in IMG/M
3300032126\|Ga0307415_102128256	Not Available	548	Open in IMG/M
3300032180\|Ga0307471_101124499	Not Available	951	Open in IMG/M
3300033814\|Ga0364930_0155668	Not Available	780	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.72%
Host-Associated	Host-Associated	13.28%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.38%
Aquatic	Environmental → Aquatic	27.34%
Plants	Host-Associated → Plants	13.28%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.03%
Freshwater	Environmental → Aquatic → Freshwater	12.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.16%
Thermal Springs	Environmental → Aquatic → Thermal Springs	8.59%
Sediment	Environmental → Aquatic → Sediment	6.25%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.56%
Roots	Host-Associated → Plants → Roots	1.56%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.12%
Sediment	Environmental → Aquatic → Freshwater → Sediment	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.38%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	8.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.25%
Loam	Environmental → Terrestrial → Soil → Loam	2.34%
Sand	Environmental → Terrestrial → Soil → Sand	1.56%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.56%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.56%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.38%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	8.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.56%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	8.59%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	7.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.47%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.91%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.56%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.56%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.56%
Hot Spring Sediments	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediments	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003890	Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - Chocolate Pots Core 3, 1cm	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009444	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3	Environmental	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022563	OV2_combined assembly	Environmental	Open in IMG/M
3300025149	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063162_10027413	3300003890	Hot Spring Sediments	MGQTHNEITQNLAERLCWEVARRDDSRVARRQYRRQLVDGVYRLDEGALLDDFFTSCRPSA*
Ga0063356_1041539682	3300004463	Arabidopsis Thaliana Rhizosphere	LCWQATRRDDSGVARGLYNKQVVDGVYQLDEGALLDDFFYF
Ga0070706_1018654252	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	WPMEQTREVITTNLAERLCWQVARRDDSRVARRLYRKQVVDGV*
Ga0070699_1020426452	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MEQTREVITTNLAERLCWQVARRDDSRVARRLYRKQVVDGV*
Ga0066905_1018831692	3300005713	Tropical Forest Soil	MAQTREEMDQTLAERLRWQAARRDGTRVGRCLWRKRVVDGVSQLDEG
Ga0081455_104103202	3300005937	Tabebuia Heterophylla Rhizosphere	MAQMREEIAQNLADRLCWQAARREDSRIARRLYRQRVVD
Ga0081538_101897163	3300005981	Tabebuia Heterophylla Rhizosphere	MGQTRDETTRNLTERLCWEVAHRDDLRVARRLYRKQIVDGVYRLDEGAVLDDFVI
Ga0081538_102982132	3300005981	Tabebuia Heterophylla Rhizosphere	MPLTPEEMTQNLAERLCWDVARLDDVRVARRLYRKQVVDGVYRLDEGALLND
Ga0075428_1021130982	3300006844	Populus Rhizosphere	MRQTQDELTQNLAERLCWEVARRDDTRVARRLYRKQEVDGVYRLDEGAVL
Ga0075431_1014165572	3300006847	Populus Rhizosphere	MRQPQDEITQNLAERMYWEVARRDDARVARRLYRQQVVDGV*
Ga0075420_1019121182	3300006853	Populus Rhizosphere	MIGQTREASTPHLAARWCWQAAHRDDARVARRWYRQPGVDGVSRVDEGAVLDDFFH
Ga0075429_1013434932	3300006880	Populus Rhizosphere	MGQTREDVAQNLAERLCWQAARRDDSRVARCLYRKRVVDGVYQLDAG
Ga0105098_100418903	3300009081	Freshwater Sediment	MQQTRAEITENLTERLCWEVARRDETRIARRLYRKQVMDGVYRLDEGTWLDDFL
Ga0066709_1022450252	3300009137	Grasslands Soil	MPHTRDKITENLAERLCWQVARRDDARVARRLYRKQVVDGVYRLDAGA
Ga0114129_116436851	3300009147	Populus Rhizosphere	MQRSKDARAQHGAERWCGEVAHRDDTRVARRLSRKPEVDGVYRLDEGAVLDD
Ga0111538_102546212	3300009156	Populus Rhizosphere	MQPTRDEIRQNLAKRLCWEVARRDDRRVARRLYRKQVIDGRNF*
Ga0105092_102083641	3300009157	Freshwater Sediment	MQQTRDEITEILTECLCWEVARRDETRIARRLYRKPVVDRVYRLDKGALLDDFL
Ga0105092_103934332	3300009157	Freshwater Sediment	MIRQPKDELTQHMAGRLCWEVAHWDDSRVARRLYRNQEVHGVYRLDEGAVLLTRT*
Ga0105092_104412041	3300009157	Freshwater Sediment	MRQTRETIEQNLAERLCWQAAHRDDSRVARRLYQKHVVDGVYRLDEGA
Ga0105092_104470341	3300009157	Freshwater Sediment	MGQTRDEIAQNLAERLCWQVARRDDSRVARRLYRKQVVDGVYRLDEGALL*
Ga0105092_104478921	3300009157	Freshwater Sediment	MDQTRETMAQNLAERLCWQVARRDDTRVARRLYHKQV
Ga0105092_107272901	3300009157	Freshwater Sediment	MGQTQEEVQQNLAERLCWQAARRDDSRVARRLYRKQVIDGVYQLDEGALLDDFFYFL
Ga0105092_109084352	3300009157	Freshwater Sediment	MRQTYDEITQNLAERLCWEVARRDDFRVARRLYRKHLVDGVYRLD
Ga0075423_108108171	3300009162	Populus Rhizosphere	MRQTRDTIEQNLAERLCWQAARRDDARVARRLYRKHVVDGV
Ga0105104_100884163	3300009168	Freshwater Sediment	MEQTREAIAPKLAERLCWQAARRDDARVARRLYRQQVVDGVYRLDEGA
Ga0105104_102176101	3300009168	Freshwater Sediment	MRRTHDEITQNLAERLCWEVARRDDSHVARRLYHKQ
Ga0114945_100110726	3300009444	Thermal Springs	MRQITEELTQNLAERLCWEVARRDDTRVARRLYRKQEVDGVYRRDEGAVLDDFF*
Ga0114945_100204715	3300009444	Thermal Springs	MRQTKEALTQNLAERLCWEVAHRDDSRVARRLSREQGVDGAYRL
Ga0114945_103502172	3300009444	Thermal Springs	MKAGLKRGAWMMPQNRAEIEQNLVERVCWQVARRDDSRVARRLVKRQRIDGVYHLEEGAVLDAFFHFLAELGV*
Ga0114945_105604571	3300009444	Thermal Springs	EITQNLAERLCWEVARRDDSRVARRLYRKQLVDGVYRLDEGALLDDFFY*
Ga0114944_10960782	3300009691	Thermal Springs	MRQQGEEITQSLAERLCWQAARRDDSRVARRLYRKQVVDGVYRLDEGALLDDFFY*
Ga0105062_10550501	3300009817	Groundwater Sand	MEQTREAMTQNLAERLCWQVARRDDARVARRLYRKQ
Ga0126313_115472281	3300009840	Serpentine Soil	MGQTHDEITQNLAERWCWQVARRDDTRVARRLYRKQVVDGVYRLEAGALL
Ga0105074_10863761	3300010029	Groundwater Sand	MGQTQDEITENLAGRLCWEVARRDDSRVARRLYRKQLVDGVYRLDEGALLDDFF
Ga0126315_111896872	3300010038	Serpentine Soil	MEQTRDELAQHLAERLCWQVACRDDSRVARRLYRKQVVDGVYQLDEGALLDAF
Ga0126380_100645531	3300010043	Tropical Forest Soil	MGQTRDAITQNLAERLCGQAARRDDTRVARRLYRTHVGDGVYRLDEGALLDDFFH
Ga0126380_110172062	3300010043	Tropical Forest Soil	MEQTREAIDQNLAERLCWQAARRDDARVARRLYRK
Ga0126380_116655432	3300010043	Tropical Forest Soil	MMGQSREGIIQNLAERVCWQAARRDDRRVARRLYRKQVVDGVYRLDEGAVLD
Ga0126384_101436544	3300010046	Tropical Forest Soil	MRPTKDELAQNLAERWCWEVAPRDDTWVARHLYRKQEVDGVYRLDAGAVLDDF*
Ga0126382_103680851	3300010047	Tropical Forest Soil	MRQTNEEITQNLAERLCWEVARRDDTRIARRLYRKQVVDRV
Ga0126382_106757413	3300010047	Tropical Forest Soil	MEQILEAMTHNLAERWCWQVAGRDDSRVARRLYRKQVVNGVYQLDEGALLDDFFLQGLGVGEPGPSAWIHWPRTS*
Ga0126382_108478081	3300010047	Tropical Forest Soil	MAQRREAITQHLAVRLCGQVARRHDSREARRLDRKPVVDGVDRLDE
Ga0126382_109558442	3300010047	Tropical Forest Soil	MRPTKDELAQNLAERWCWEVAPRDDTWVARHLYRKQEVDGGYRLDAGAVLDDF*
Ga0126382_124848541	3300010047	Tropical Forest Soil	MAQTRGEIDQNLAERLCWQAARRDDSRVARRLYRKQVVD
Ga0126376_118628842	3300010359	Tropical Forest Soil	MEQTREAIAQNLAERLCWQAARRDDSRVARRLYRKQLVEGVYRLDEGALLDDFFHFLHELGVV
Ga0126377_104284321	3300010362	Tropical Forest Soil	MMGQRREGIIQHLAERVCWQAARRDDRRVARRLYRNQGVDGVYRLDEGALLVKFFHFLQALGGLDL
Ga0126377_111723921	3300010362	Tropical Forest Soil	MEQTREAITQNLAERLCWQVVRRDEARVARRLYRKQVVDGVYRLDEGALLDDFLHVLQELGVVDW
Ga0126377_129726072	3300010362	Tropical Forest Soil	MEQTREELTATLAERLCWQVACRDDSRVARRSYRKLVVDGVYQLDEGALLDDF*
Ga0126379_136564851	3300010366	Tropical Forest Soil	MGQTHDEITQNLAERLCWEVARRDDSGVARRLYRKPLVVGVDRLDEGALLDDFFH
Ga0138505_1000595451	3300010999	Soil	MPQTRDKITGHLTERRCWEGARRDETRIARRLYRKPVVDRV
Ga0138513_1000822521	3300011000	Soil	MWSMPQTRDKITEHLTERRCWEVARRDETRIARCLYRKPVVDGVYRLEEGALLDDFLNCLRTLGVMDLLADVHGTAI*
Ga0137382_102158752	3300012200	Vadose Zone Soil	MRQTLDKITENLAERLCWDVAHRDDSRVARRLYRTQEIDGVYRLDEGAVLDDFFHFL
Ga0137382_106338041	3300012200	Vadose Zone Soil	MEQTREAIAQKLAERLCWQAARRDDARVARRLYRKQVVD
Ga0137374_102524381	3300012204	Vadose Zone Soil	MGQTREDIAQHLSERLCWQAARRDDSRVARRLYRKQVVDGVYRLDEGALLDDFFSFL*
Ga0137376_103003491	3300012208	Vadose Zone Soil	MGQTRDEITQNLAERLCWEVARRDDSRVARRLYRKQEVDGVYRLD
Ga0137372_102550251	3300012350	Vadose Zone Soil	MGQTRGEIDQNLAERLWWQAARRDDSRVARRLYRKQVVDGVFR
Ga0137367_100285691	3300012353	Vadose Zone Soil	MKQTREAIAQKLAERLCWQAARRDDSRVARRLYRKQVVDGVYRLDEGALLDDF
Ga0137369_100909561	3300012355	Vadose Zone Soil	MGQTRDGITQNLAERLCWEVARRDDSRVARRLYRKQVVDGVDRLDE
Ga0137371_101652791	3300012356	Vadose Zone Soil	MKPTRDAMAQTLAARWWWQAARRDDARLARRRYRKHVVDGVY
Ga0137384_102195441	3300012357	Vadose Zone Soil	MRHTKDEITQNLAERLCWAVARRDETRVARRLYRK
Ga0137384_104774271	3300012357	Vadose Zone Soil	MEQTREAIAQTLAERLCWQVARRDDSRVARRLYRKQVVDGVYQLDEGALLDDF
Ga0137384_108626902	3300012357	Vadose Zone Soil	MGQTREAITQNLAERLCWQAARRDDSRVARRLYHKQVVDGVYRLDEGALLDDFFH
Ga0137384_115359021	3300012357	Vadose Zone Soil	MQHTPDEIPPNVAERLCWAVARRDDSRVGRRLYRKHLVDGVYRLD
Ga0137368_100629144	3300012358	Vadose Zone Soil	MLQTREAITQNLAERLCLEAARRDDTRVARRLYRKQVIDGVYRLDE
Ga0137368_103727431	3300012358	Vadose Zone Soil	MPQTRDKITEHLTERRCWEGARRDETRIARRLYRKPVMDRVYRLDKGALLDNFLHLLQ
Ga0137368_104069832	3300012358	Vadose Zone Soil	MGQTREAITQNLAERLCWQAARRDDTRVARRLYRKQAVDGV
Ga0137368_108455671	3300012358	Vadose Zone Soil	MGQTHDEITQHLAERLCWQVARRDDTRIARRLYRKQLVDGVYRLDEGAL
Ga0137375_104956291	3300012360	Vadose Zone Soil	MGQTRGEIDQNLAERLWWQAARRDDSRVAGRLYRKQVVDGVFRLDE
Ga0137375_105617991	3300012360	Vadose Zone Soil	MGQTREAIAQNLAERLCWQAACRDDARVARRLYRGQVV
Ga0137375_110844042	3300012360	Vadose Zone Soil	MGQTREAITQNLAERLCWQAAQSDDSRVARRLYRKEVIDGVYRLDEGALLNDFCHFLRGL
Ga0137397_101046712	3300012685	Vadose Zone Soil	MEPTREALTQPVAERVCGQAARRDDARVARRLYRKQVVDGV*
Ga0137397_101770782	3300012685	Vadose Zone Soil	MGQTREAITQNLAARLCWQAAQRDDTRVARCLYRKGVVDGVYRLDEDVSQLWISC*
Ga0137397_104924742	3300012685	Vadose Zone Soil	MPQTRDKITEHLTERRCWEVARRHETRITRRLYRKPVVDGVYRLEEGALLDDFLHCLRTLGVMDLLANVHGTAI*
Ga0137394_100662151	3300012922	Vadose Zone Soil	MRHTTDELAQHVAERWCWKVAHRDETRVARCLYRQQEVDGVYCLDEGAVLDDFFHFLDQSGVMAWL
Ga0137394_101629302	3300012922	Vadose Zone Soil	MGQTREAITQNLAARLCWQAAQRDDTRVARRLYRKGVVDGVYRLDEDVSQLWISC*
Ga0137394_109090311	3300012922	Vadose Zone Soil	MGQTHDEITQNLAERLCWEVARRDDSRVARRLYRKPLVDGV*
Ga0137404_100015875	3300012929	Vadose Zone Soil	MPQTRDKITEHLTERRCWEVARRDETRIARRLYRKPVVDEVYRLEEGALLDDFLHCLRTLGVMDLLADVHGTAI*
Ga0137404_103992911	3300012929	Vadose Zone Soil	MRQTLDKITENLAERLCWDVAHRDDSRVARRLYRTQEIDGVYRLDEGAVLDD
Ga0137404_114240392	3300012929	Vadose Zone Soil	MGQTHGEITHNLTERLCWQVARPDDTRIARRLYRKQLVDGVYRL
Ga0137404_121129061	3300012929	Vadose Zone Soil	MTWSLAERLCWEVAHHDDTRVARRLYRQQVVDGVYRLDAGALLDDFFYFLEDVG
Ga0137407_101752161	3300012930	Vadose Zone Soil	MEHTQEAITTTVAERWCWQVAQRDAVRVARRLYRKQVVDGVYPLD
Ga0137407_101753591	3300012930	Vadose Zone Soil	MGQTHDEITQNLAERLCWQVARRDDTRVARRLYRKQQVEGVYRLD
Ga0137407_106416903	3300012930	Vadose Zone Soil	MRQTREEVAEHLAERLCWQAARRDDGRVARRLYRKQVVDGVYRLDEGALLDHFFDFLQELGVVDRLGEV
Ga0137407_119405852	3300012930	Vadose Zone Soil	MGQTRETFTANLAERLCGQVARRDDARLVRRLSRKQVVDGVYRLDEGAWLDDFFQFLPAVGV
Ga0126375_109029702	3300012948	Tropical Forest Soil	MGQTRGAIDQNLAERWCWQAARRDDARVARRLYRKPVVDGVYRL
Ga0137409_102282353	3300015245	Vadose Zone Soil	MQHTKDELAQNLAERLCWEVAHRDDTRVARRLYRKQEVDGVYRLDEGAGLDDFFHFL
Ga0132256_1033198511	3300015372	Arabidopsis Rhizosphere	MEQTRAAMAQNLAERLCWQAAGRDDSRVARRLYRKQV
Ga0184621_102621961	3300018054	Groundwater Sediment	MGQTRDETAQNLAERLCWQVARRDDARVARRLYRKQVVD
Ga0184623_100313392	3300018056	Groundwater Sediment	MEQTREAMAQNLAERLCWQVARRDDSRVARRLYRQPVGDGVYQLDEGAWLDDFG
Ga0184623_103046291	3300018056	Groundwater Sediment	MGQTPDEITQNLAERLCWEVARRDDSRVARRLYRKPLVDGVYRLDA
Ga0184637_104435921	3300018063	Groundwater Sediment	MGHTREAITQNLAARWCWQAAQRDETRVARRLYRQGVVDGVYRLDAGARLDAFGHCWREL
Ga0184632_103077802	3300018075	Groundwater Sediment	MGQTRDETTRNLAERLCWEVARRDDSRVARRLHRKQIVDGVYRLDE
Ga0184609_101959713	3300018076	Groundwater Sediment	MKQTREEVAQHLAERWCWQAARREDSRVARRLYRRPVVDGVYRLDE
Ga0184633_104002192	3300018077	Groundwater Sediment	MKQTQEEITTNLAERWYWQVARRDDTRVARRLYRKPLV
Ga0184639_102373861	3300018082	Groundwater Sediment	MKQTQEEITTNLAERWYWQVARRDDTRVARRLYRKEVVDGVYPLDTGAV
Ga0190265_114539951	3300018422	Soil	MRQTHDERTQNLAERLCWEVARRYDTRVARRLYRKPEVDGVYRLDEGAVLEDFFQFLQAL
Ga0190270_118543391	3300018469	Soil	MRQIKDELPQNLAERLCWDVVRRDDTRVARRLYRQQE
Ga0190270_119283183	3300018469	Soil	MRQIKDELPQNLAERLCWDVVRRDDTRVARRLYRQQEVDRVYRLDEGAVLDDFLQFLRTI
Ga0190270_121802742	3300018469	Soil	VAEATKPQSHEEITQNLAERLCWEVARRDEARIARRLSRKPEVDGGYRLDAGAVWADCC
Ga0190270_132805262	3300018469	Soil	MAQTREVMAQNLADRLCWQAAGRDDSRVARRLYRKQVVDSVYRLDEGALLDDFFYFLHELGVVDL
Ga0184646_13216772	3300019259	Groundwater Sediment	MRQTRETIEQNLAARWCWQAARRDDSRVARRLYQT
Ga0184646_13276591	3300019259	Groundwater Sediment	MRQTRDELTQNLAERMCWEVARRDDTRVAHRLYRKQVVDGVYRLDEGA
Ga0184646_14071002	3300019259	Groundwater Sediment	MRQIKDELTQHVAERWCWEVARRDDTRVARRLSRKQEVDGV
Ga0137408_14352541	3300019789	Vadose Zone Soil	MQPTRDEMTQHLAERMCWEVACRDDTRIARRLYRKQVVDGVYRL
Ga0137408_14360192	3300019789	Vadose Zone Soil	MPQTRDKITEHLTERRCWEVARRDETRIARRLYRKPVVDEVYRLEEGALLDDFLHCLRTLGVMDLLADVHGTAI
Ga0179594_100167681	3300020170	Vadose Zone Soil	MGQTRDEIAQNLAERLCWQVARRDDSWVARRLYRKQVVDGVYRLDEGALLDDFI
Ga0179594_101883742	3300020170	Vadose Zone Soil	MGQTHDEITQNLAERLCWQVARRDDTRVARRLYRKQVVDGVYRLEAGAL
Ga0179594_102934031	3300020170	Vadose Zone Soil	MGQTHDEITQNLAERLCWQVARRDDTRVARRLYRKQQVEGGYRLD
Ga0210378_101901351	3300021073	Groundwater Sediment	MKQTREAIAQNLAARLCWQAARRDDSRIARRLYRKPVVDGVYRLDAGAVLDDCCYFLHEL
Ga0222625_11316911	3300022195	Groundwater Sediment	MKQTREEVAQNLAERLCWQVARRDDTRVARRLYRKQLVDGVYRLDEGALLDDFFHFLQAIGV
Ga0212128_100913502	3300022563	Thermal Springs	MMPQNRAEIEQNLVERVCWQVARRDDSRVARRLVKRQRIDGVYHLEEGAVLDAFFHFLAELGV
Ga0212128_101216043	3300022563	Thermal Springs	MRQITEELTQNLAERLCWEVARRDDTRVARRLYRKQEVDGVYRRDEGAVLDDFF
Ga0212128_101814592	3300022563	Thermal Springs	MRQQGEEITQSLAERLCWQAARRDDSRVARRLYRKQVVDGVYRLDEGALLDDFFY
Ga0212128_107539352	3300022563	Thermal Springs	MQQTRDEITQNLAERLCWEVARRDDSRVARRLYRKQEVDGVY
Ga0209827_102187141	3300025149	Thermal Springs	MEQTREEMTENLAERLCWEVARRDDSRIARRLYRKQLVDGVYRLDEGALLDDFFY
Ga0209819_101407902	3300027722	Freshwater Sediment	MIRQPKDELTQHMAGRLCWEVAHWDDSRVARRLYRNQEVHGVYRLDEGAVLLTRT
Ga0307278_101039331	3300028878	Soil	MEQTREAITQNLAERWCWPAARRDDARVARRLYREHGVDG
Ga0307278_104700902	3300028878	Soil	MGQTRGEIDQILAERRCWQAARRDDARVARRLYRKQVVDGVYRL
Ga0299907_112442231	3300030006	Soil	MPQTREELTTNLAERWCWQVAQRDDACVARRLVPQ
Ga0268386_100615216	3300030619	Soil	MPQTRGELTDNLAERWCGQVARRADARVARRLYRKQV
Ga0308178_10263672	3300030990	Soil	MGQTRDETAQNLAERLCWQVARRDDARVARRLYRKQVVDGVYRLDE
Ga0307408_1010038301	3300031548	Rhizosphere	MQQSRDEITQDLAEWSSGEVARRDDRRVARRLYREWAIDGGY
Ga0307405_121307311	3300031731	Rhizosphere	MRQTRETIEQNLAERLCWQVARRDDSRLARRLYRKQVVDGVYRLDKGALL
Ga0307416_1010926201	3300032002	Rhizosphere	MRQTRETIEQNLAERLCWQVAQRDDSRVARRLYRKQVIDGVYRLDEGAVLDDFFYFLHELGVIELLG
Ga0307414_119347412	3300032004	Rhizosphere	MGQTPDEITQNLAERLCWESARRDDSRVARRLYRKQLVDGVYRLDQGAWLDDFLH
Ga0307415_1021282562	3300032126	Rhizosphere	MRPTREEVAEHLAERLCCQAARREEGRVARRLYRMQVVDGVYRLDEGALLDHCF
Ga0307471_1011244991	3300032180	Hardwood Forest Soil	MEQTREAITQNLAERLCWQAARRDDARVARRLYRKPVVDGVYRLDE
Ga0364930_0155668_600_779	3300033814	Sediment	MKQTQEEITTNLAERVCWQVARRDDTRVARRLYRKPLVGGVYPLETGAVLDEFFHVLREL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064476

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences