Metagenome Family F064486

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064486
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	64 residues
Representative Sequence	MRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR
Number of Associated Samples	107
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.16 %
% of genes near scaffold ends (potentially truncated)	29.69 %
% of genes from short scaffolds (< 2000 bps)	69.53 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.438 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (14.062 % of family members)
Environment Ontology (ENVO)	Unclassified (31.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.344 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 63.49% β-sheet: 0.00% Coil/Unstructured: 36.51%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF05762	VWA_CoxE	32.81
PF02625	XdhC_CoxI	30.47
PF13478	XdhC_C	20.31
PF00266	Aminotran_5	2.34
PF00491	Arginase	2.34
PF01145	Band_7	1.56
PF01592	NifU_N	1.56
PF12804	NTP_transf_3	0.78
PF03924	CHASE	0.78
PF14588	YjgF_endoribonc	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG1975	Molybdoenzyme maturation factor PaoD (Mo cofactor insertion), XdhC/CoxF family	Posttranslational modification, protein turnover, chaperones [O]	30.47
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	2.34
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	1.56
COG3452	Extracellular (periplasmic) sensor domain CHASE (specificity unknown)	Signal transduction mechanisms [T]	0.78
COG3614	Extracytoplasmic sensor domain CHASE1 (specificity unknown)	Signal transduction mechanisms [T]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.44 %
Unclassified	root	N/A	1.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.44 %
Unclassified	root	N/A	1.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.44 %
Unclassified	root	N/A	1.56 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	37.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	5.47 %
Unclassified	root	N/A	1.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.78 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	37.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.47 %
Unclassified	root	N/A	1.56 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	37.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.47 %
Unclassified	root	N/A	1.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	36.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.47 %
Unclassified	root	N/A	1.56 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.78 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	36.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.47 %
Unclassified	root	N/A	1.56 %
Ramlibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter	0.78 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	36.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.47 %
Unclassified	root	N/A	1.56 %
unclassified Ramlibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter	0.78 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.78 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	36.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5.47 %
Unclassified	root	N/A	1.56 %
Ramlibacter sp. 2FC	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. 2FC	0.78 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002560\|JGI25383J37093_10101676	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300002562\|JGI25382J37095_10103341	All Organisms → cellular organisms → Bacteria	1002	Open in IMG/M
3300003267\|soilL1_10003725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	6195	Open in IMG/M
3300003999\|Ga0055469_10001973	All Organisms → cellular organisms → Bacteria	3078	Open in IMG/M
3300004013\|Ga0055465_10006065	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300004156\|Ga0062589_100901102	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300004463\|Ga0063356_105517596	Not Available	543	Open in IMG/M
3300004480\|Ga0062592_100786497	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300005171\|Ga0066677_10001683	All Organisms → cellular organisms → Bacteria	8000	Open in IMG/M
3300005176\|Ga0066679_10380149	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300005178\|Ga0066688_10136725	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1526	Open in IMG/M
3300005289\|Ga0065704_10769861	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300005332\|Ga0066388_100210938	All Organisms → cellular organisms → Bacteria	2568	Open in IMG/M
3300005332\|Ga0066388_100254166	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300005332\|Ga0066388_100344103	All Organisms → cellular organisms → Bacteria	2137	Open in IMG/M
3300005332\|Ga0066388_101029831	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300005440\|Ga0070705_100171336	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1461	Open in IMG/M
3300005444\|Ga0070694_101893381	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300005445\|Ga0070708_100027153	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4909	Open in IMG/M
3300005468\|Ga0070707_100433548	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300005529\|Ga0070741_10096923	All Organisms → cellular organisms → Bacteria	3148	Open in IMG/M
3300005536\|Ga0070697_100179656	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300005536\|Ga0070697_101505027	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	601	Open in IMG/M
3300005546\|Ga0070696_101933141	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005552\|Ga0066701_10005034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5426	Open in IMG/M
3300005558\|Ga0066698_10960251	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300005558\|Ga0066698_11002630	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005559\|Ga0066700_10050043	All Organisms → cellular organisms → Bacteria	2563	Open in IMG/M
3300005560\|Ga0066670_10076992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1810	Open in IMG/M
3300005569\|Ga0066705_10300942	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1016	Open in IMG/M
3300005586\|Ga0066691_10006989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5029	Open in IMG/M
3300005764\|Ga0066903_104554383	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	739	Open in IMG/M
3300005937\|Ga0081455_10399062	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300006049\|Ga0075417_10308500	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300006844\|Ga0075428_100209667	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300006844\|Ga0075428_102214948	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300006845\|Ga0075421_100015096	All Organisms → cellular organisms → Bacteria	9646	Open in IMG/M
3300006871\|Ga0075434_101180390	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300006876\|Ga0079217_10276990	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	914	Open in IMG/M
3300007004\|Ga0079218_10820498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	898	Open in IMG/M
3300007004\|Ga0079218_13749199	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300007076\|Ga0075435_100122565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2170	Open in IMG/M
3300007255\|Ga0099791_10624286	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300007265\|Ga0099794_10248691	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300010043\|Ga0126380_12031703	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	527	Open in IMG/M
3300010046\|Ga0126384_12167307	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300010047\|Ga0126382_10222111	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300010048\|Ga0126373_10591296	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300010303\|Ga0134082_10070375	All Organisms → cellular organisms → Bacteria	1360	Open in IMG/M
3300010329\|Ga0134111_10000723	All Organisms → cellular organisms → Bacteria	10814	Open in IMG/M
3300010333\|Ga0134080_10001445	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	7988	Open in IMG/M
3300010359\|Ga0126376_10711810	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	968	Open in IMG/M
3300010359\|Ga0126376_12104678	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300010360\|Ga0126372_10520544	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1122	Open in IMG/M
3300010398\|Ga0126383_10567430	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300010398\|Ga0126383_11082285	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	891	Open in IMG/M
3300012203\|Ga0137399_11159991	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	650	Open in IMG/M
3300012205\|Ga0137362_10376225	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300012206\|Ga0137380_10007037	All Organisms → cellular organisms → Bacteria	10052	Open in IMG/M
3300012207\|Ga0137381_10033613	All Organisms → cellular organisms → Bacteria	4154	Open in IMG/M
3300012362\|Ga0137361_10107012	All Organisms → cellular organisms → Bacteria	2442	Open in IMG/M
3300012469\|Ga0150984_118046058	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300012685\|Ga0137397_10146104	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300012918\|Ga0137396_10291487	All Organisms → cellular organisms → Bacteria	1206	Open in IMG/M
3300012918\|Ga0137396_10535928	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300012922\|Ga0137394_10177070	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300012944\|Ga0137410_10292027	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300012971\|Ga0126369_13362862	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	524	Open in IMG/M
3300012972\|Ga0134077_10005818	All Organisms → cellular organisms → Bacteria	3813	Open in IMG/M
3300012977\|Ga0134087_10701939	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300014259\|Ga0075311_1007527	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300014265\|Ga0075314_1004193	All Organisms → cellular organisms → Bacteria	2556	Open in IMG/M
3300014884\|Ga0180104_1067158	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	983	Open in IMG/M
3300015264\|Ga0137403_10022142	All Organisms → cellular organisms → Bacteria	6806	Open in IMG/M
3300015371\|Ga0132258_10060239	All Organisms → cellular organisms → Bacteria	8739	Open in IMG/M
3300015371\|Ga0132258_12411565	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1317	Open in IMG/M
3300015373\|Ga0132257_101239691	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	945	Open in IMG/M
3300017656\|Ga0134112_10320476	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	627	Open in IMG/M
3300017657\|Ga0134074_1000520	All Organisms → cellular organisms → Bacteria	13722	Open in IMG/M
3300017657\|Ga0134074_1234395	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300017659\|Ga0134083_10022898	All Organisms → cellular organisms → Bacteria	2221	Open in IMG/M
3300018433\|Ga0066667_10000125	All Organisms → cellular organisms → Bacteria	22223	Open in IMG/M
3300018482\|Ga0066669_10868804	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300020199\|Ga0179592_10395780	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	603	Open in IMG/M
3300021560\|Ga0126371_13846148	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300025559\|Ga0210087_1048627	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	851	Open in IMG/M
3300026277\|Ga0209350_1056318	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1131	Open in IMG/M
3300026295\|Ga0209234_1064503	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1394	Open in IMG/M
3300026295\|Ga0209234_1253720	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	571	Open in IMG/M
3300026297\|Ga0209237_1009575	All Organisms → cellular organisms → Bacteria	5806	Open in IMG/M
3300026297\|Ga0209237_1020892	All Organisms → cellular organisms → Bacteria	3734	Open in IMG/M
3300026298\|Ga0209236_1003399	All Organisms → cellular organisms → Bacteria	9743	Open in IMG/M
3300026301\|Ga0209238_1019090	All Organisms → cellular organisms → Bacteria	2627	Open in IMG/M
3300026313\|Ga0209761_1332815	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300026316\|Ga0209155_1043409	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1774	Open in IMG/M
3300026326\|Ga0209801_1234680	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	709	Open in IMG/M
3300026327\|Ga0209266_1174571	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	826	Open in IMG/M
3300026328\|Ga0209802_1003831	All Organisms → cellular organisms → Bacteria	9970	Open in IMG/M
3300026333\|Ga0209158_1119284	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300026333\|Ga0209158_1189364	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	728	Open in IMG/M
3300026335\|Ga0209804_1269533	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	604	Open in IMG/M
3300026529\|Ga0209806_1219092	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300026542\|Ga0209805_1264408	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	665	Open in IMG/M
3300026551\|Ga0209648_10011729	All Organisms → cellular organisms → Bacteria	7623	Open in IMG/M
3300027252\|Ga0209973_1024740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter → unclassified Ramlibacter → Ramlibacter sp. 2FC	819	Open in IMG/M
3300027395\|Ga0209996_1062784	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	572	Open in IMG/M
3300027637\|Ga0209818_1158842	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	639	Open in IMG/M
3300027655\|Ga0209388_1015282	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300027671\|Ga0209588_1136446	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	781	Open in IMG/M
3300027775\|Ga0209177_10404514	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	548	Open in IMG/M
3300027873\|Ga0209814_10257284	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	757	Open in IMG/M
3300027873\|Ga0209814_10408306	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300027909\|Ga0209382_10029810	All Organisms → cellular organisms → Bacteria	6573	Open in IMG/M
3300027909\|Ga0209382_10279392	All Organisms → cellular organisms → Bacteria	1888	Open in IMG/M
3300028536\|Ga0137415_10746014	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	790	Open in IMG/M
3300031548\|Ga0307408_100048109	All Organisms → cellular organisms → Bacteria	3057	Open in IMG/M
3300031548\|Ga0307408_100383876	All Organisms → cellular organisms → Bacteria	1201	Open in IMG/M
3300031548\|Ga0307408_101916458	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	568	Open in IMG/M
3300031720\|Ga0307469_10372968	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1207	Open in IMG/M
3300031820\|Ga0307473_10820225	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300031911\|Ga0307412_11775949	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300031995\|Ga0307409_102889539	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	507	Open in IMG/M
3300032180\|Ga0307471_100160174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2183	Open in IMG/M
3300032180\|Ga0307471_100255842	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300032180\|Ga0307471_103663668	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300033412\|Ga0310810_10011687	All Organisms → cellular organisms → Bacteria	10268	Open in IMG/M
3300033813\|Ga0364928_0188810	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.25%
Host-Associated	Host-Associated	18.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.12%
Plants	Host-Associated → Plants	18.75%
Aquatic	Environmental → Aquatic	3.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.25%
Marine	Environmental → Aquatic → Marine	2.34%
Sediment	Environmental → Aquatic → Sediment	0.78%
Floodplain	Environmental → Terrestrial → Floodplain	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.72%
Loam	Environmental → Terrestrial → Soil → Loam	10.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.12%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.78%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	24.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.12%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.34%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.06%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.91%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.91%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.91%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.34%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.56%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.56%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014884	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT730_16_1Da	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027252	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027395	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25383J37093_101016762	3300002560	Grasslands Soil	MRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLASVGGGRTR*
JGI25382J37095_101033412	3300002562	Grasslands Soil	LLASRLHLPLGDMRKIISPVMLLLLAVLHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGVALLSLSSVGRGRSR*
soilL1_100037254	3300003267	Sugarcane Root And Bulk Soil	MRKIVAPLLLLLLAVVHAPRQAQALVSSFFPDIFPLPTSEPVLLLLTGLALISLASVGSNRPR*
Ga0055469_100019732	3300003999	Natural And Restored Wetlands	MRKVVAPVMLLLMAVVHAPTNAQALVSSFFPDIFPLATSEPAMLLLTGLALLSLASVGSTRHR*
Ga0055465_100060653	3300004013	Natural And Restored Wetlands	MRKVVAPVMLLLMAVVHAPTNAQALVSSFFPDIFPLATSEPATLLLTGLALLSLASVGSTRHR*
Ga0062589_1009011021	3300004156	Soil	MRKIVAPLLLLLLAVVHAPRQAQALVSSFFPDIFPLATSEPVLLLLTGLALLSLASVGSNRPR*
Ga0063356_1055175961	3300004463	Arabidopsis Thaliana Rhizosphere	MRKIVAPLLLLMLAVVHAPRQAQALVSSFFPDIFPLPTSEPVLLLLTGLALISLASVGSNRPR*
Ga0062592_1007864972	3300004480	Soil	MRKIVAPLLLLLLAVVHAPRQAQALVSSFFPDIFPLPTSEPVLLLLTGLALISLASVGSN
Ga0066677_100016833	3300005171	Soil	MRKIIAPVMLLLLAVVHGPTQAQALVSSLFPSVFPLATSEPAMLFLTGLALLSLSSVGRGRTR*
Ga0066679_103801491	3300005176	Soil	MRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR*
Ga0066688_101367252	3300005178	Soil	VASRLHLLLSEMRKVIAPVMLLFLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR*
Ga0065704_107698611	3300005289	Switchgrass Rhizosphere	MRKIVALVMLLMLAVVHAPTQAQALVSSFFPDIFPLATSEPAMLLLTGLALLSLASVGSTRQR*
Ga0066388_1002109382	3300005332	Tropical Forest Soil	MRKAIAPVTLLFIAVIHGPTQAQALVSSLFPNVFPLATSEPAVLLLTGLALLSLSSVGRGRAR*
Ga0066388_1002541662	3300005332	Tropical Forest Soil	MRKVIAPVTLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLSSVGRGRAR*
Ga0066388_1003441032	3300005332	Tropical Forest Soil	LIAVVHGPTQGQALVSSLFSNVFPLATSEPAVLLLTGLALLSLSSVGRSRMR*
Ga0066388_1010298312	3300005332	Tropical Forest Soil	MRKVIAPITLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLSSVGRSRAR*
Ga0070705_1001713362	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	AFRLQFLLDDMGKVIAPLMLLLLAIIHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGFAFMSLSSVGRGRTR*
Ga0070694_1018933812	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MAFRLQFLLDDMGKVIAPLMLLLLAIIHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGFALLSLSSVGRGRTR*
Ga0070708_1000271535	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VAPRLHFLLSEMRKVIAPVMLLLLAVVDGPTQAQALVSSLFPNVFPLATSEPAMLFLTGIALLSLSSVGRGRTR*
Ga0070707_1004335482	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VAFRLHFLLNDMRKVIAPVTLLLIAIIHGPTQAQALVSSLFPNVFPLAASEPAVLFLTGMALLSLSSVGRGRSR*
Ga0070741_100969233	3300005529	Surface Soil	MRKIVAPLMLLLLAVVHAPTQAQALVSSFFPDIFPLATSEPAMLLLTGLALLSLASVGSTRQR*
Ga0070697_1001796561	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VAFRLHLRLNDMRKVIAPVTLLLIAIIHGPTQAQALVSSLFPNVFPLAASEPAVLFLTGMALLSLSSVGRGRSR*
Ga0070697_1015050272	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRKVIAPLMLLLLAVVDGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR*
Ga0070696_1019331412	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRKVIAPLMLLLLAVLQGPTQAQALVSSLFPSVFPIATSEPVMLLLTGLALLTLSSVGRGRSH*
Ga0066701_100050343	3300005552	Soil	MRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLASVGRGRTR*
Ga0066698_109602512	3300005558	Soil	MRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLASVGGG
Ga0066698_110026302	3300005558	Soil	MRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLAS
Ga0066700_100500431	3300005559	Soil	VIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLASVGGGRTR
Ga0066670_100769923	3300005560	Soil	LVLVASRLHLLLSEMRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR*
Ga0066705_103009421	3300005569	Soil	LLSEMRKVIAPVMLLFLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR*
Ga0066691_100069893	3300005586	Soil	MRKVIAPVMLLLLTVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLASVGGGRTR*
Ga0066903_1045543832	3300005764	Tropical Forest Soil	MRKVIAPVTLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPAILLLTGLALLSLSSVGRGRAR*
Ga0081455_103990622	3300005937	Tabebuia Heterophylla Rhizosphere	VTLLLIAVVHGPTQAQALVSSLLPSVFPLAMSEPAVLVLTGLALLSLSSVGRGRVR*
Ga0075417_103085002	3300006049	Populus Rhizosphere	MRKAIAPVTLLLIAVLHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLSSVGRGRAR*
Ga0075428_1002096672	3300006844	Populus Rhizosphere	MRKVLALLTLLLLAVVHAPTQAQALVSSFFPDIFPLATSEPAMLLLTGLALLSLASLGSSRQR*
Ga0075428_1022149482	3300006844	Populus Rhizosphere	MRKVIAPVTLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLSSVGRGRVR*
Ga0075421_10001509610	3300006845	Populus Rhizosphere	MRKIVGPLLLLMLAVVHAPRQAQALVSSFFPDIFPLATSEPVMLLLTGLALISLASVGSNRPR*
Ga0075434_1011803901	3300006871	Populus Rhizosphere	MRKFVAPVLLLLLAVVHAPRQAQALVSSFFPDIFPLATSEPILLLLTGLALLSLASVGSN
Ga0079217_102769901	3300006876	Agricultural Soil	DQRDPGRDRTRGMRKIVAPLLLLMLAVVHAPRQAQALVSSFFPDIFPLATSEPVMLLLTGLALISLASVGSNRPR*
Ga0079218_108204982	3300007004	Agricultural Soil	MRKILAPLMLLMLAIVHGPTQAQALVSSFFPDIFPIATSEPVMLLLTGLALLSLASVGSSRPR*
Ga0079218_137491991	3300007004	Agricultural Soil	MRKIVAPLLLLMRAVVHAPSQAQALVSSFFPDIFPLATSEPVMLLLTGLALISLASVGSNRPR*
Ga0075435_1001225653	3300007076	Populus Rhizosphere	RPRGVPLALPTPDMRKVIAPVTLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPAILLLTGLALLSLSSVGRGRAR*
Ga0099791_106242862	3300007255	Vadose Zone Soil	MRKIIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR*
Ga0099794_102486912	3300007265	Vadose Zone Soil	MRKIIAPVMLLLLAVLLGPTQAQALVSSLFPNVFPLATSEPAMLFLTGVALLSLSSVGRGRSR*
Ga0126380_120317032	3300010043	Tropical Forest Soil	LALPISVMRKVIAPVTLLLIAVVHGPTQAQALVSSLFPSVFPLATSELAVLLLTGLALLSLSSVGRSRMR*
Ga0126384_121673071	3300010046	Tropical Forest Soil	MRKVIAPITLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLSSV
Ga0126382_102221112	3300010047	Tropical Forest Soil	MRKVIAPVTLLLIAVVHGPTQAQALVSSLCPSVFPLATSERAVLLLTGLALLSLSSVGRSRMR*
Ga0126373_105912962	3300010048	Tropical Forest Soil	MRKVIAPVTLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPAVLLLTGLALLSLSSVGRGRAR*
Ga0134082_100703752	3300010303	Grasslands Soil	MRKVIAPVMLLFLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR*
Ga0134111_100007238	3300010329	Grasslands Soil	MRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTELALLSLASVGGGRTR*
Ga0134080_1000144510	3300010333	Grasslands Soil	MRKVIAPVMLLLLAVVHGPTQAQALLSSLFPNVFPLATSEPAMLFLTGLALLSLASVGGGRTR*
Ga0126376_107118101	3300010359	Tropical Forest Soil	LALPTPDMRKVIAPITLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPALLLLTGLALLSLSSVGRGRAR*
Ga0126376_121046782	3300010359	Tropical Forest Soil	MRKVIAPITLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPAVLLLTGLALLSLSSVGRGRAR*
Ga0126372_105205442	3300010360	Tropical Forest Soil	LLIAVIHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLSSVGRGRAR*
Ga0126383_105674302	3300010398	Tropical Forest Soil	MRKVIAPVTLLLIAVVHGPTQARALVSSLFPSVFPLATSEPAVLLLTGLALLSLSSVGRSRIR*
Ga0126383_110822852	3300010398	Tropical Forest Soil	MRKVIAPITLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPALLLLTGLALLSLSSVGRGRAR*
Ga0137399_111599911	3300012203	Vadose Zone Soil	RKVIAPVMLLFLAIVHGPTQAQALVSSLFPNVFPLATSEPTMLFLTGVALLSLSSVGRGRSR*
Ga0137362_103762252	3300012205	Vadose Zone Soil	MRKVIAPVMLLLLPVVQGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLASVGRGRTR*
Ga0137380_100070374	3300012206	Vadose Zone Soil	MRKVIAPVMLLLLAVVRGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLASVGGGRTR*
Ga0137381_100336133	3300012207	Vadose Zone Soil	MRKVIAPVMLLLLAVVQGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLASVGGGRTR*
Ga0137361_101070123	3300012362	Vadose Zone Soil	MRKVIAPVMLLLLPVVQGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLASVGGGRTC*
Ga0150984_1180460581	3300012469	Avena Fatua Rhizosphere	AIPERTQRMRKIVAPLLLLLLAVVHAPRQAQALVSSFFPDIFPLPTSEPVLLLLTGLALLSLASVGSNRPR*
Ga0137397_101461042	3300012685	Vadose Zone Soil	MRKIIAPVMLLFLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR*
Ga0137396_102914872	3300012918	Vadose Zone Soil	MRKVIPPVMLLLLAVLHGPTQAQALVSSLFPNVFPLATSEPTMLFLTGVALLSLSSVGRGRSR*
Ga0137396_105359282	3300012918	Vadose Zone Soil	MRKAIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRPR*
Ga0137394_101770702	3300012922	Vadose Zone Soil	MRKIIPPVMLLLLAVLHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRSR*
Ga0137410_102920272	3300012944	Vadose Zone Soil	MRKIIAPVMLLLLAVVHGPTQAQALVSSLFPHVFPLATSEPAMLFLTGLALLSLSSVGRGRTR*
Ga0126369_133628622	3300012971	Tropical Forest Soil	APITLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLSSVGRGRAR*
Ga0134077_100058183	3300012972	Grasslands Soil	MRKVIAPVMLLLLAVVRGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLSSVGRGRTR*
Ga0134087_107019391	3300012977	Grasslands Soil	KVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLASVGGGRTR*
Ga0075311_10075273	3300014259	Natural And Restored Wetlands	MRKVVAPVMLLLMAVVHAPTNAQALVSSFFPDIFPLATSEPAMLVLTGLALLSLASVGSTRHR*
Ga0075314_10041933	3300014265	Natural And Restored Wetlands	MRKVVAPVMLLLMAVVHAPTNAQALVSSFFPDIFPLATSEPAMLLLMGLALLSLASVGSTRHR*
Ga0180104_10671582	3300014884	Soil	MRKIVALLMLLMLAVVHAPTQAQALVSSFFPDIYPLATSEPAMLLLTGLALLSLASAGSSRPR*
Ga0137403_100221428	3300015264	Vadose Zone Soil	LLLSEMRKVIAPVMLLFLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR*
Ga0132258_1006023910	3300015371	Arabidopsis Rhizosphere	MRKIIAPVMLLIVAIVHGPTQAQALVSSLFPSVFPLASSEPAVLFLTGLALLSLSSVGRGRPR*
Ga0132258_124115652	3300015371	Arabidopsis Rhizosphere	MTVMRKMVAPLMLLLLAVVHGPTQAQALVSSFFPDIFPLATSEPAMLLLTGLALLSLSSVGRTRPR*
Ga0132257_1012396911	3300015373	Arabidopsis Rhizosphere	MRKVIAPVTLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPAILLLTGLALLSLSSVGHGRAR*
Ga0134112_103204761	3300017656	Grasslands Soil	IIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLSSVGRGRTR
Ga0134074_100052019	3300017657	Grasslands Soil	MRKVIAPVMLLLLAVVQGPTQAQALVSSLFPNVFPLATSEPAMLFLTELALLSLASVGGGRTR
Ga0134074_12343951	3300017657	Grasslands Soil	MRKIIAPVMLLLLAVVHGPTQAQALVSSLFPSVFPLATSEPAMLFLTGLALLSL
Ga0134083_100228983	3300017659	Grasslands Soil	MRKVIAPVMLLLLAVVRGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLASVGGGRTR
Ga0066667_1000012526	3300018433	Grasslands Soil	MRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLASVGGGRTR
Ga0066669_108688042	3300018482	Grasslands Soil	MRKIIAPVMLLLLAVVHGPTQAQALVSSLFPSVFPLATSEPAMLFLTGLALLSLSSVGRGRTR
Ga0179592_103957802	3300020199	Vadose Zone Soil	LLSEMRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR
Ga0126371_138461481	3300021560	Tropical Forest Soil	MRKVIAPVTLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLSSVGRGRAR
Ga0210087_10486272	3300025559	Natural And Restored Wetlands	MRKVVAPVMLLLMAVVHAPTNAQALVSSFFPDIFPLATSEPAMLLLTGLALLSLASVGSTRHR
Ga0209350_10563181	3300026277	Grasslands Soil	VIAPVMLLLLAVVQGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR
Ga0209234_10645033	3300026295	Grasslands Soil	PVMLLLLAVVHGPTQAQALVSSLFPSVFPLATSEPAMLFLTGLALLSLSSVGRGRTR
Ga0209234_12537202	3300026295	Grasslands Soil	LHLLPSEMRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR
Ga0209237_10095752	3300026297	Grasslands Soil	MRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEAAMLFLTGLALLSLASVGRGRTR
Ga0209237_10208923	3300026297	Grasslands Soil	LLASRLHLPLGDMRKIISPVMLLLLAVLHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGVALLSLSSVGRGRSR
Ga0209236_10033991	3300026298	Grasslands Soil	MRKVVAPVMLLLLAVVHGPMQAQALVSSLFPNVFPLATSAAAMLFLTGLALLSLASVGRGRTR
Ga0209238_10190903	3300026301	Grasslands Soil	LQLPGGDIRKVIAPVMLSLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLASVGGGRTR
Ga0209469_11090102	3300026307	Soil	MRKIIAPVMLLLLAVVHGPTQAQALVSSLFPSVFPLATSEPAMLFLTGLALL
Ga0209761_13328151	3300026313	Grasslands Soil	DMRKIISPVMLLLLAVLHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGVALLSLSSVGRGRSR
Ga0209155_10434092	3300026316	Soil	MRKIIAPVMLLLLAVVHGPTQAQALVSSLFPSVFPLATSEPAMLFLTGLALLSLASVGGGRTR
Ga0209801_12346801	3300026326	Soil	EMRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR
Ga0209266_11745712	3300026327	Soil	MRKVIAPVMLLLLAVVQGPTQAQALVSSLFPNLFPLATSEPAMLFLTELALLSLASVGGGRTR
Ga0209802_100383112	3300026328	Soil	MRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLASVVGGRTR
Ga0209158_11192841	3300026333	Soil	MRKVIAPVMLLLLTVVHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLASVGGGRTR
Ga0209158_11893642	3300026333	Soil	GDMRKVIAPVMLLLLTVVHGPTQAQALVSSLFPNVFPLATSAAAMLFLTGLALLSLASVGRGRTR
Ga0209804_12695332	3300026335	Soil	ASRLHFLLSEMRKVIAPVMLLFLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR
Ga0209806_12190922	3300026529	Soil	MRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR
Ga0209805_12644081	3300026542	Soil	LVASGLHFLLSEMRKVVAPVMLLFLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR
Ga0209648_100117297	3300026551	Grasslands Soil	VASRLHLLLSEMRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLTLLSLSSVGRGRTR
Ga0209973_10247402	3300027252	Arabidopsis Thaliana Rhizosphere	MRKIVAPLLLLLLAVVHAPRQAQALVSSFFPDIFPLPTSEPVLLLLTGLALISLASVGSNRPR
Ga0209996_10627842	3300027395	Arabidopsis Thaliana Rhizosphere	LLLLLAVVHAPRQAQALVSSFFPDIFPLPTSEPVLLLLTGLALISLASVGSNRPR
Ga0209818_11588422	3300027637	Agricultural Soil	MRKIVGPLLLLMLAVVHAPRQAQALVSSFFPDIFPLATSEPVMLLLTGLALISLASVGSNRPR
Ga0209388_10152823	3300027655	Vadose Zone Soil	LLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR
Ga0209588_11364462	3300027671	Vadose Zone Soil	MRKIIAPVMLLLLAVLLGPTQAQALVSSLFPNVFPLATSEPAMLFLTGVALLSLSSVGRGRSR
Ga0209177_104045142	3300027775	Agricultural Soil	MRKVIAPAMLLLLAVLHGPTQAQALVSSLFPSVFPLANSEPAMLFFTGLALLSLSSLGRGRPR
Ga0209814_102572842	3300027873	Populus Rhizosphere	MRKAIAPVTLLLIAVLHGPTQAQALVSSLFPNVFPLATSEPAMLLLTGLALLSLSSVGRGRAR
Ga0209814_104083061	3300027873	Populus Rhizosphere	MRKVIAPVTLLLIAVIHGPTQAQALVSSLFPNVFPLATSEPAILLLTGLALLSLSSVGRGRAR
Ga0209382_100298106	3300027909	Populus Rhizosphere	MRKVLALLTLLLLAVVHAPTQAQALVSSFFPDIFPLATSEPAMLLLTGLALLSLASLGSSRQR
Ga0209382_102793922	3300027909	Populus Rhizosphere	MRKIVALVMLLMLAVVHAPTQAQALVSSFFPDIFPLATSEPAMLLLTGLALLSLASVGSTRQR
Ga0137415_107460142	3300028536	Vadose Zone Soil	RVLLASGLHLPLSEMRKVIAPVMLLLLAVVHGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR
Ga0307408_1000481093	3300031548	Rhizosphere	MRKIVAPLLLLLLAVVHAPRQAQALVSSFFPDIFPLATSDPVLLLLTGLALISLASVGSNRPR
Ga0307408_1003838761	3300031548	Rhizosphere	MRKIVAPLLLLMLAVVHAPRQAQALVSSFFPDIFPLATSEPVLLLLTGLALISLASVGRSRPR
Ga0307408_1019164581	3300031548	Rhizosphere	RKIVAPLLLLMLAVVHAPRQAQALVSSFFPDIFPLATSEPVLLLLTGLALISLASVGRSRPR
Ga0307469_103729682	3300031720	Hardwood Forest Soil	VAFRLHFLLNDMRKVIAPVTLLLIAIIHGPTQAQALVSSLFPNVFPLAASEPAVLFLTGMALLSLSSVGRGRSR
Ga0307473_108202251	3300031820	Hardwood Forest Soil	VAFRLHFLVNDMRKVIAPVTLLLIAIIHGPTQAQALVSSLFPKVFPLAASEPAVLFLTGMALLSLSSVGRGRSR
Ga0307412_117759492	3300031911	Rhizosphere	LLLMLAVVHAPRQAQALVSSFFPDIFPLATSEPVLLLLTGLALISLASVGRSRPR
Ga0307409_1028895392	3300031995	Rhizosphere	RSGISVIPERTQGMRKIVAPLLLLLLAVVHAPRQAQALVSSFFPDIFPLATSEPVLLLLTGLALLSLASVGSNRSR
Ga0307471_1001601743	3300032180	Hardwood Forest Soil	NDMRKVIAPVTLLLIAIIHGPTQAQALVSSLFPNVFPLAASEPAVLFLTGMALLSLSSVGRGRSR
Ga0307471_1002558422	3300032180	Hardwood Forest Soil	VAPRLHFLLSEMRKVIAPVMLLLLAVVDGPTQAQALVSSLFPNVFPLATSEPAMLFLTGLALLSLSSVGRGRTR
Ga0307471_1036636682	3300032180	Hardwood Forest Soil	MRKVIAPALLLLLAVLHAPNNAQALVSSLFPNVFPLAASEPGTLVLTGLALIGLASVGRGRAR
Ga0310810_100116879	3300033412	Soil	MRKIIAPVMLLIVAIVHGPTQAQALVSSLFPSVFPLASSEPAVLFLTGLALLSLSSVGRGRPR
Ga0364928_0188810_76_267	3300033813	Sediment	MRKIVALLMLLMLAVVHAPTQAQALVSSFFPDIFPLATSEPAMLLLTGLALLSLASAGSSRQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064486

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences