Metagenome / Metatranscriptome Family F064529

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064529
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	97 residues
Representative Sequence	MTAVVQFIVLKRRGKWVVKSKDLERIFSVRREAVDAAIRFANDSGKEGNPGVVLFQKSKTKFEKIWTYGESPYPPARSDLPMMSGTAEPAKLADTLG
Number of Associated Samples	82
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.47 %
% of genes near scaffold ends (potentially truncated)	25.00 %
% of genes from short scaffolds (< 2000 bps)	86.72 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (18.750 % of family members)
Environment Ontology (ENVO)	Unclassified (43.750 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (77.344 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.00% β-sheet: 24.80% Coil/Unstructured: 59.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF05532	CsbD	4.69
PF07690	MFS_1	3.91
PF04392	ABC_sub_bind	2.34
PF03631	Virul_fac_BrkB	2.34
PF05239	PRC	2.34
PF13426	PAS_9	1.56
PF11345	DUF3147	1.56
PF13188	PAS_8	0.78
PF01068	DNA_ligase_A_M	0.78
PF13628	DUF4142	0.78
PF04679	DNA_ligase_A_C	0.78
PF01565	FAD_binding_4	0.78
PF05721	PhyH	0.78
PF05974	DUF892	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	4.69
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	2.34
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.34
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.56
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.78
COG3685	Ferritin-like metal-binding protein YciE	Inorganic ion transport and metabolism [P]	0.78
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	98.44 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	87.50 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.56 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	55.47 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	25.78 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.56 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	55.47 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.94 %
Aurantimonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae	3.91 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.56 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	55.47 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	9.38 %
Aurantimonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas	3.91 %
Hydrocarboniphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga	1.56 %
Filomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Filomicrobium	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	55.47 %
Aurantimonas coralicida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → Aurantimonas coralicida	3.12 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	2.34 %
Hydrocarboniphaga effusa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa	1.56 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.56 %
Candidatus Filomicrobium marinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Filomicrobium → Candidatus Filomicrobium marinum	0.78 %
Aurantimonas manganoxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → Aurantimonas manganoxydans	0.78 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.78 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	55.47 %
Aurantimonas coralicida	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → Aurantimonas coralicida	3.12 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	2.34 %
Hydrocarboniphaga effusa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa	1.56 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.56 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	0.78 %
Candidatus Filomicrobium marinum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Filomicrobium → Candidatus Filomicrobium marinum	0.78 %
Aurantimonas manganoxydans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → Aurantimonas manganoxydans	0.78 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig844588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	895	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10124090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	629	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1089773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	539	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10071877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10119328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → Aurantimonas manganoxydans	552	Open in IMG/M
3300002245\|JGIcombinedJ26739_100685065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	903	Open in IMG/M
3300002906\|JGI25614J43888_10173035	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300002910\|JGI25615J43890_1060107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300002914\|JGI25617J43924_10114513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	954	Open in IMG/M
3300003911\|JGI25405J52794_10135700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300005166\|Ga0066674_10152297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1092	Open in IMG/M
3300005167\|Ga0066672_10070659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2062	Open in IMG/M
3300005167\|Ga0066672_10385866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	916	Open in IMG/M
3300005167\|Ga0066672_10540444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	755	Open in IMG/M
3300005179\|Ga0066684_10049596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2400	Open in IMG/M
3300005179\|Ga0066684_10264500	All Organisms → cellular organisms → Bacteria → Proteobacteria	1133	Open in IMG/M
3300005180\|Ga0066685_10563412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	785	Open in IMG/M
3300005184\|Ga0066671_10062128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1938	Open in IMG/M
3300005187\|Ga0066675_10758697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	731	Open in IMG/M
3300005332\|Ga0066388_100016777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6156	Open in IMG/M
3300005332\|Ga0066388_100085326	All Organisms → cellular organisms → Bacteria → Proteobacteria	3553	Open in IMG/M
3300005332\|Ga0066388_100327016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2179	Open in IMG/M
3300005332\|Ga0066388_100381094	All Organisms → cellular organisms → Bacteria → Proteobacteria	2056	Open in IMG/M
3300005332\|Ga0066388_100702344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1618	Open in IMG/M
3300005332\|Ga0066388_100717718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1604	Open in IMG/M
3300005332\|Ga0066388_102193636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	996	Open in IMG/M
3300005332\|Ga0066388_103780274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa	772	Open in IMG/M
3300005332\|Ga0066388_105199880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300005363\|Ga0008090_15034737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → Aurantimonas coralicida	587	Open in IMG/M
3300005363\|Ga0008090_15708901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1126	Open in IMG/M
3300005436\|Ga0070713_100822588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	891	Open in IMG/M
3300005436\|Ga0070713_100915126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	844	Open in IMG/M
3300005467\|Ga0070706_101085282	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300005536\|Ga0070697_101373515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	631	Open in IMG/M
3300005555\|Ga0066692_10242766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1136	Open in IMG/M
3300005559\|Ga0066700_10487780	All Organisms → cellular organisms → Bacteria → Proteobacteria	861	Open in IMG/M
3300005569\|Ga0066705_10354073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	925	Open in IMG/M
3300005576\|Ga0066708_11063774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300005713\|Ga0066905_100042819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2701	Open in IMG/M
3300005713\|Ga0066905_100208711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1467	Open in IMG/M
3300005764\|Ga0066903_100524051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2019	Open in IMG/M
3300005764\|Ga0066903_100857543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1635	Open in IMG/M
3300005764\|Ga0066903_100901867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1600	Open in IMG/M
3300005764\|Ga0066903_100968358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1550	Open in IMG/M
3300005764\|Ga0066903_101099186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1466	Open in IMG/M
3300005764\|Ga0066903_101995463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1114	Open in IMG/M
3300005764\|Ga0066903_102687033	All Organisms → cellular organisms → Bacteria → Proteobacteria	965	Open in IMG/M
3300005764\|Ga0066903_103862258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	805	Open in IMG/M
3300005764\|Ga0066903_104278516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	763	Open in IMG/M
3300005764\|Ga0066903_105231675	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005764\|Ga0066903_106240468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	623	Open in IMG/M
3300005764\|Ga0066903_107258073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300005764\|Ga0066903_107271274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	573	Open in IMG/M
3300006032\|Ga0066696_10723592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa	638	Open in IMG/M
3300006049\|Ga0075417_10165893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1034	Open in IMG/M
3300006800\|Ga0066660_10764403	All Organisms → cellular organisms → Bacteria → Proteobacteria	788	Open in IMG/M
3300006844\|Ga0075428_100240413	All Organisms → cellular organisms → Bacteria → Proteobacteria	1953	Open in IMG/M
3300006846\|Ga0075430_101568627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300006846\|Ga0075430_101608776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	533	Open in IMG/M
3300006880\|Ga0075429_100300364	All Organisms → cellular organisms → Bacteria → Proteobacteria	1406	Open in IMG/M
3300007258\|Ga0099793_10021267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2666	Open in IMG/M
3300009012\|Ga0066710_102480114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	750	Open in IMG/M
3300009100\|Ga0075418_10217381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2034	Open in IMG/M
3300009137\|Ga0066709_104333506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300009156\|Ga0111538_10642415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1345	Open in IMG/M
3300009792\|Ga0126374_10663023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	779	Open in IMG/M
3300010048\|Ga0126373_10384431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1424	Open in IMG/M
3300010145\|Ga0126321_1053033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	567	Open in IMG/M
3300010154\|Ga0127503_10053409	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	797	Open in IMG/M
3300010154\|Ga0127503_10241430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300010154\|Ga0127503_11250618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300010322\|Ga0134084_10310063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → Aurantimonas coralicida	589	Open in IMG/M
3300010358\|Ga0126370_10304171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1266	Open in IMG/M
3300010359\|Ga0126376_10858208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	893	Open in IMG/M
3300010360\|Ga0126372_10817305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	925	Open in IMG/M
3300010360\|Ga0126372_10820209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	924	Open in IMG/M
3300010360\|Ga0126372_11022822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	839	Open in IMG/M
3300010360\|Ga0126372_12993648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300010361\|Ga0126378_11652284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300010361\|Ga0126378_11821318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	692	Open in IMG/M
3300010361\|Ga0126378_13163769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → Aurantimonas coralicida	524	Open in IMG/M
3300010366\|Ga0126379_10207697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1890	Open in IMG/M
3300010366\|Ga0126379_10359158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1490	Open in IMG/M
3300010376\|Ga0126381_101929220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	852	Open in IMG/M
3300010376\|Ga0126381_102115660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300010398\|Ga0126383_10057196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3283	Open in IMG/M
3300010398\|Ga0126383_10168340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2067	Open in IMG/M
3300012198\|Ga0137364_11213360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300012202\|Ga0137363_10084226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2376	Open in IMG/M
3300012208\|Ga0137376_10422281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1158	Open in IMG/M
3300012211\|Ga0137377_10334114	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1451	Open in IMG/M
3300012350\|Ga0137372_10540503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300012356\|Ga0137371_10463789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	979	Open in IMG/M
3300012362\|Ga0137361_11928053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300012957\|Ga0164303_10956778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300012971\|Ga0126369_10122805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2395	Open in IMG/M
3300012971\|Ga0126369_10366171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1469	Open in IMG/M
3300012971\|Ga0126369_10640723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1136	Open in IMG/M
3300012975\|Ga0134110_10106706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1135	Open in IMG/M
3300012987\|Ga0164307_10838281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	734	Open in IMG/M
3300014150\|Ga0134081_10198253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300018431\|Ga0066655_10039488	All Organisms → cellular organisms → Bacteria → Proteobacteria	2365	Open in IMG/M
3300018431\|Ga0066655_10344784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	977	Open in IMG/M
3300018433\|Ga0066667_11652929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300018482\|Ga0066669_10120955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1865	Open in IMG/M
3300018482\|Ga0066669_10745294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	864	Open in IMG/M
3300021444\|Ga0213878_10524634	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300021478\|Ga0210402_11279331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300021560\|Ga0126371_10601390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1249	Open in IMG/M
3300021560\|Ga0126371_10950768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1002	Open in IMG/M
3300021560\|Ga0126371_11543059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	791	Open in IMG/M
3300021560\|Ga0126371_12264240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300025910\|Ga0207684_11509950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Filomicrobium → Candidatus Filomicrobium marinum	546	Open in IMG/M
3300026304\|Ga0209240_1066294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1347	Open in IMG/M
3300026324\|Ga0209470_1174326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	933	Open in IMG/M
3300026551\|Ga0209648_10237167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1361	Open in IMG/M
3300026552\|Ga0209577_10768048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Aurantimonadaceae → Aurantimonas → Aurantimonas coralicida	540	Open in IMG/M
3300027909\|Ga0209382_10265884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1943	Open in IMG/M
3300028878\|Ga0307278_10017662	All Organisms → cellular organisms → Bacteria → Proteobacteria	3305	Open in IMG/M
3300029636\|Ga0222749_10295128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300031573\|Ga0310915_10676494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300031719\|Ga0306917_10215546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1459	Open in IMG/M
3300031890\|Ga0306925_10662015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1096	Open in IMG/M
3300031941\|Ga0310912_10769572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	744	Open in IMG/M
3300031946\|Ga0310910_10100755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2143	Open in IMG/M
3300032035\|Ga0310911_10287401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	945	Open in IMG/M
3300032035\|Ga0310911_10690949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	591	Open in IMG/M
3300032205\|Ga0307472_100686474	All Organisms → cellular organisms → Bacteria → Proteobacteria	918	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.97%
Host-Associated	Host-Associated	7.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.84%
Plants	Host-Associated → Plants	7.03%
Aquatic	Environmental → Aquatic	3.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.25%
Freshwater	Environmental → Aquatic → Freshwater	3.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.41%
Loam	Environmental → Terrestrial → Soil → Loam	23.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.25%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	23.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	19.53%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.91%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.12%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.75%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	18.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.06%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.38%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.91%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.56%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.56%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_08870440	2124908045	Soil	MTALIQFIVLKREGKWVVKSKDLERFFSVQREAVDAAIRLANDSGKEGKPGVVLFQKSKTKFEKIWTYGENPYPPARSDLPLMSGHRTDENRRTLG
AF_2010_repII_A1DRAFT_101240901	3300000597	Forest Soil	MTQVIQFVVLKRENQWVVKSGDLERVFSIQAQAVDVAIRFANDSGKEGKPGVVLFQKSKSEFEKIWTYGEDSYPPAKSDLLTTSRTTEPGKLADTIG*
AF_2010_repII_A100DRAFT_10897731	3300000655	Forest Soil	MNTLVQFIVLRRKGKWVVKSKDLERVFSVQREAVDAAVKLANDSGKEGKLGVVLFQKSKTEFEKIWTYGESPYPPVRSDLPAMSGTPEPGKLADTLG*
AF_2010_repII_A001DRAFT_100718772	3300000793	Forest Soil	MTAVVQFIVLKRRDKWVLKSKDLERIFSGQREAVDAAIRFANDSGKEGNPAVVIFQKSKTKFEKIWTYGESPYPPARSDLPMMMLGRAEPAKLADARG*
AF_2010_repII_A001DRAFT_101193281	3300000793	Forest Soil	MTAVVQFIVLKRRDKWVLKSKDLKRIFSRQREAVDAAIRFANDSAKEGKPGVVLFQKSKSEFEKIWTYGEDSYPPAKSDLLTTNKTTEPGKLADTIG*
JGIcombinedJ26739_1006850652	3300002245	Forest Soil	MTAVAQFLVLKRQDKWVVKSKDLERFFSIEQQAVDAAIRLANDSGKEGKPGAVLFQKSKTKFETIWTYGENSYPPARSDLPRMSGAPAPAKVADTLG*
JGI25614J43888_101730351	3300002906	Grasslands Soil	VIQFLVRKRQDKWVVKSKDLERFFSTERQAVDAAIRLANDSGKEGKPGAVLFQKSKTKFETIWTYGENSYPPAGSDLPRTSGTPEPAKLADXLG*
JGI25615J43890_10601071	3300002910	Grasslands Soil	MTAVIQFLVRKRQDKWVVKSKDLERFFSTERQAVDAAIRLANDSGKEGKPGAVLFQKSKTKFETIWTYGENSYPPAGSDLPRTSGTPEPAKLADTLG*
JGI25617J43924_101145132	3300002914	Grasslands Soil	MTAVIQFLVRKRQDKWVVKSKDLERFFSTERQAVDAAIRLANDSGKEGKPGAVLFQKSKTKFETIWTYGENSYPPAGSDLPRTSGTPEPAKLADPLG*
JGI25405J52794_101357001	3300003911	Tabebuia Heterophylla Rhizosphere	MNTLVQFIVLKRENKWVVKGNNLERVFSVQREAVEAAIHLANESGKEGHPAAVLFQKSKTKFXKIWTYGESPYPPPRXDLPKTSSTTPEPGKLADTLG*
Ga0066674_101522971	3300005166	Soil	MTAPIQFIVLKREGKWVVKSMDLERFFPIQREAVDAAIRFANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLPMMSGTAEPAKLADTLG*
Ga0066672_100706591	3300005167	Soil	MTAVVQFIVLKRRGKWVVKSKDLERIFSVRREAVDAAIRFANDSGKEGNPGVVLFQKSKTKFEKIWTYGESPYPPARSDLPMMSGTAEPAKLADTLG*
Ga0066672_103858661	3300005167	Soil	MTAPIQFIVLKYKGKWSIRSGDLDRFFSIQREAMDAAIRLANESGKEGKPAVVLLQKSKTEFQKIWTYGESPYPPARSDLPTTSGTPEPAKLADTLG*
Ga0066672_105404441	3300005167	Soil	MTALVQFIVLKRRGKWLVKTKGLERFFSVQRDAVDAAIRFANDAGKEGNPGVVLFQKSKTEFEKLWTYGENSYPPARSDLPATSGTPEPGKLVDNLG*
Ga0066684_100495962	3300005179	Soil	MTAPIQFIVLKYKGKWSIRSGDLDQFFSVQREAMDAAIRLANESGKEGKPAVVLLQKSKTEFQKIWTYGESPYPPARSDLPTTSGTPEPAKLADTLG*
Ga0066684_102645002	3300005179	Soil	MTTMVQFIVLKRQGKWVVQCNDLERFFSIQREAVDAAIRFANDSGKEGKPGSVLFQKSKTEFETIWTYGESPYPPQRSDLPAMSGTPEPGKLSSKQRPTRSPHRRGRAVSVAQ*
Ga0066685_105634122	3300005180	Soil	MTAPIQFIVLKREGKWVVKSKDLERVFSVQREAVDAAILFANDSGKEGKPGAVLLQKSKAKFEKIWTYRQSPYPPAKSDLPMVSRMPEPKKLVDVLG*
Ga0066671_100621282	3300005184	Soil	MTAPIQFIVLKYKGKWSIRSGDLDRFFSIQREAMDAAIRLANESGKEGKPAVVLLQKSKTEFQKIWTYGESPYPPARSDLPTTSGTPEPAKLADTLR*
Ga0066675_107586972	3300005187	Soil	MTALVQFIVLKRRGKWLVKTKGLERFFSVQRDAVDAAIRFSNDAGKEGNPGVVLFQKSKTEFEKLWTYGENSYPPARSDLPATSGTPEPGKLVDNLG*
Ga0066388_1000167772	3300005332	Tropical Forest Soil	MTAVVQFIVLKRGDKWALKSKDLERIFSRQRETVDAAIRFANDTGKEGNPAVVLFQKSKTRFEKIWTYGESPYPPARSDLPMMMLGTAEPG*
Ga0066388_1000853262	3300005332	Tropical Forest Soil	MTALIQREGKWVVKSKDLERVFSVQREAVDAAIRFANDSGKEGKPGVVLFQKSKTKFEKIWTYGQSPYPLARSDLPMVSWSPEPEKLAGTLG*
Ga0066388_1003270163	3300005332	Tropical Forest Soil	MTAVVQFIVLKRRDKWVLKSKDLERIFSGQREAVDAAIRFANDSGKEGNPAVVIFQKSKTKFEKIWTYGESPYPPARSDLPMMMLGRTEPAKLADARG*
Ga0066388_1003810943	3300005332	Tropical Forest Soil	MTAVVQFIVLKRQDKWVVKSRDLERIFSIQRKAVDAAIRFANDSGKEGNPAVVLLQKSKNKFEKIWTYGESPYPPARSDLPMMPGTAEPAKLAESVG*
Ga0066388_1007023442	3300005332	Tropical Forest Soil	MGAVVQFIVLKREEKWVIKAKDLERFFSVQREAVDAAIRLANDSGKEGNPGVVLLQKSKSDCQKIWTYGENAYPPARSDLPAMSGTSEPGKFGDSLG*
Ga0066388_1007177181	3300005332	Tropical Forest Soil	MTAVIQFIVLKRRDKWVLKSKDLERTFSRQREAVDAAIRFANDSGKEGNPAVVLFQKSKTKFEKIWTYGESPYPPGRSDLPMIMLGTGEPAKFVDTLG*
Ga0066388_1021936361	3300005332	Tropical Forest Soil	MSAVIQFLVLKRDNQWVVKSGDLERLFSIQREAIDAAIRFANDSGKEGKPGVVLFQKSKSEFEKIWTYGEDSYPPAKSDLLATNGTPEPGKLADTVG*
Ga0066388_1037802741	3300005332	Tropical Forest Soil	MTAVIQFIVLKRRDKCRREAVDAAIRFANDSGKEGNPAVVLFQKSKTKFEKIWTYGESPYPPARSDLSMIMLGTAEPAKLADTLG*
Ga0066388_1051998802	3300005332	Tropical Forest Soil	MSAVIQFLVLKRDNQWVVKSSDLERLFSIQREAVDAAIRFANDSGKEGKPGVVLFQKSKSEFEKIWTYGEDSYPPAKSDLPATSGTPEPGKLAETVG*
Ga0008090_150347371	3300005363	Tropical Rainforest Soil	LVDRHTYSNHHSYLGFRRAPLNDLGRQFIVLKRRDKWVLKSKDLERIFSRQREAVDAAIRFANDSGKEGNPSVVLFQKSKTKFEKIWTYGESPYPPARSDLPMMMLGTAEPAKLADTLG*
Ga0008090_157089013	3300005363	Tropical Rainforest Soil	MPQQVYQMNTIVQFIVLKREGKWVVKSKDLERVFSVQREALDAAIKLANDSGKEGKPGVVLFQKSKTKFEKIWMYSENPYPPARSDLPLMSGHRTDENRRTH*
Ga0070713_1008225882	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	KWVVKSGDLEKLFSTQREAVDAAIRLANDSGKEGKPGVVLFQKSKSEFETIWRYGESSYPPTKSDLPVTHGTPEPRKLADLIG*
Ga0070713_1009151261	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTGAVQFIVLKRADKWVVKSGDLERVFLAKRDAVAAAIRFANDSGKEGKPSVVLHQKSKADFQSIWMYGQSPYPPTKSDLAATSATSKPRKLAHTLS*
Ga0070706_1010852822	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTTVIQFLVLKRDNKWVVKSGDLERFFSAQREAVDAAIRSANDSGKEGKPGAVLFQKSKSEFETIWTYGEDSYPPTKSDLPLTRGTPEPGKLADTIG*
Ga0070697_1013735152	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MTALIQFIVLKREGKWVVKSKDLERVFSVQREAVDAAIRFANDSGKEGKPGVVLCQKSKTKFEKIWTYGEDSYPPTKSDLP
Ga0066692_102427662	3300005555	Soil	MTAVVQFIVLKRRGKWVVKSKDLERIFSVRREAVDAAIWFANDSGKEGNPGVVLFQKSKTKFEKIWTYGESPYPPARSDLPMMSGTAEPAKLADTLG*
Ga0066700_104877802	3300005559	Soil	MTAVVQFIVLKRWGKWVVKSKDLERIFSVRREAVDAAIRFANDSGKEGNPGVVLFQKSKTKFEKIWTYGESPYPPARSDLPMMSGTAEPAKLADTLG*
Ga0066705_103540733	3300005569	Soil	MTTMVQFIVLKRQGKWVVQCNDLERFFSIQREAVDAAIRFANDSGKEGKPGSVLFQKSKTEFETIWTYGESPYPPQRSDLPAMSGTPEPGK
Ga0066708_110637742	3300005576	Soil	MTTMVQFIVLKRQGKWVVQCNDLERFFSIQREAVDAAIRFANDSGKEGKPGTVLFQKSKTEFETIWTYGESPYPPQRSDLPAMSGTPEPGKL
Ga0066905_1000428192	3300005713	Tropical Forest Soil	MSAVIQFLVLKRDNQWVVKSGDLERLFSIQREAVDAAIRFANDSGKEGKPGVVLFQKSKSEFEKIWTYGEDSYPPAKSDLPPTSGTPELGKLTDTVG*
Ga0066905_1002087112	3300005713	Tropical Forest Soil	MTAPIQFIVLKCKGKWSIKSRDLHRFFSMQREAIDAAIRLANESGKEGKPAVVLFQKSKTEFQKIWTYGESAYPPTKSDLGVLA
Ga0066903_1005240512	3300005764	Tropical Forest Soil	MTAGRQFIVLKRGDKWVLKSKNLERVFSIQWEAVDAAIRFANDSGKEGNPGVVLFQKSKTKFEKIWTYGESPYPPARSDLPMMSGTAEPAKLANTLD*
Ga0066903_1008575434	3300005764	Tropical Forest Soil	MGAIVQFIVLKRDDKWVVKANDQERFFSAQREAVDAAIRLANDSGKEGNPGVVLLQKSKADYKKIWTYGEDSYPPVRTDLPPMSGTPEPGKLADSFG*
Ga0066903_1009018671	3300005764	Tropical Forest Soil	MTALIQFIVLKREGRWVVRSKDFERFFSVQREAVDAAIRLANDSGKEGKPGVVLFQKSKTKFEKIWMYSENPYPPARSDLPLMSGHRTDENRRTH*
Ga0066903_1009683582	3300005764	Tropical Forest Soil	MPQQVYQMNTVVQFIVLRREGKWVVKSKDLERVFSVQREAVDAAIKLANDSGKEGKPGVVLFQKSKTKFEKIWTYGESPYPPVRSGLPAMSGTPEPRKLTDALG*
Ga0066903_1010991861	3300005764	Tropical Forest Soil	MSKVTQTTIVQFIVLRREGRWAVRANDLERFFCAQREAVDAAIRLANDSGKEGKPAVVLFQKSKSEFARIWTYGEDSYPPAMSDLPIARARREPTPADTAA*
Ga0066903_1019954632	3300005764	Tropical Forest Soil	MSAVIQFLVLRRDNQWVVKSGDLERLFSIQREAVDAAIRFANDSGKEGKPGVVLFQKSKSEFEKIWTYGEDSYPPAKSDLPATSGTPEPGKLAETIG*
Ga0066903_1026870331	3300005764	Tropical Forest Soil	EVCMPQRALPNEHHRQFLVLKREGKWIVKSKDLERVFSIQREAVDAAIKLANDSGKEGKPGVVLFQKSKTEFEKIWTYGESPYPPVRSDLSAMSGGPEPGKLADTLG*
Ga0066903_1038622582	3300005764	Tropical Forest Soil	VLKRRDKWVLKSKDLERTFSRQREAVDAAIRFANDSGKEGNPAVVLFQKSKTKFEKIWTYGESPYPPARSDLSMIMLGTAEPAKLADTLG*
Ga0066903_1042785161	3300005764	Tropical Forest Soil	MSAVIQFLVLKRDNQWVVKSGDLERLFSIQREAVDAAIRFANDSGKEGKPGVVLFQKSKSEFEKIWTYGEDSYPPAKSDLPPTSGTQELGKLADTVG*
Ga0066903_1052316752	3300005764	Tropical Forest Soil	MTALIQFIVLKRRDKWVLKSKDLERTFSRQREAVDAAVRFANDSGKEGNPAVVLFQRSKTKFEKIWTYGESPYPPARSDLPMVMLGTAEPAKLADTLG*
Ga0066903_1062404681	3300005764	Tropical Forest Soil	VNTVVQFIVLRREGKWVVKSKDLERVFSVPRQAVDAAITLANESGKEGRPGVVLFQKSKTKFEKIWTYGESPYPPVRSELPVMSGTPEPGKLTDALG*
Ga0066903_1072580731	3300005764	Tropical Forest Soil	MGAVVQFIVLKREEKWVIKAKDLERFFSVQREAVDAAIRLANDSGKEGNPGVVLLQKSKSDCQKIWTYGENAYPPARSDLPAMSGTSEPGKFGD
Ga0066903_1072712741	3300005764	Tropical Forest Soil	MNTVVQFIVLKREGKWVVKSKDLERVFSVQREAVDAAIKLANECGKEGKPGVVLCQKSKTEFEKIWTYGESPYPPVRSGLPAMSGTPEPRKLTDALG
Ga0066696_107235921	3300006032	Soil	MTTMVQFIVLKRQGKWVVQCNDLERFFSIQREAVDAAIRFANDSGKEGKPGSVLFQKSKTEFETIWTYGESPYPPQRSDLPAMSGTPEPGKLSSKQRPTRSPHRRGRA
Ga0075417_101658931	3300006049	Populus Rhizosphere	LRNQRIGGDSLGSRSFVLVDRHTYPDHPSYLALRRAPLMTALIQFIVLKREGKWVVKSVDLERFFPIQREAVDAAIRFANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLPMVSRTPEPEKLADTLG*
Ga0066660_107644031	3300006800	Soil	MTAVTQFLVLKRQDKWVVKSKDLERFFSIQQQAVDAAIRLANDSGKEGKPGAVLFQKSKTEFETIWTYGENSYPPARSDLPRMSGAPAPAKLADTLG*
Ga0075428_1002404133	3300006844	Populus Rhizosphere	MTALIQFIVLKREGKWVVKSVDLERFFPIQREAVDAAIRFANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLPMVSRTPEPEKLADTLG*
Ga0075430_1015686271	3300006846	Populus Rhizosphere	LRRAPLMTALIQFIVLKREGKWVVKSVDLERFFPIQREAVDAAIRFANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLPMVSRTPEPEKLADTLG*
Ga0075430_1016087761	3300006846	Populus Rhizosphere	MTAPIQFIVLKYKGKWSIKSRDLQRSFSMQREAMDAAIQLANEAGKEGKPAVVLFQKSKTEFQKIWTYGESPYPPVRSDLPATSGDA*
Ga0075429_1003003643	3300006880	Populus Rhizosphere	TYPDHPSYLALRRAPLMTALIQFIVLKREGKWVVKSVDLERFFPIQREAVDAAIRFANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLPMVSRTPEPEKLADTLG*
Ga0099793_100212671	3300007258	Vadose Zone Soil	MTAVIQFLVRKRQDKWVVKSKDLERFFSTERQAVDAAIRLANDSGKEGKPGAVLFQKSKTKFETIWTYEENSYPPAGSDLPRTSGTPEPAKLADTLG*
Ga0066710_1024801141	3300009012	Grasslands Soil	MTAPIQFVVLKYKGKWSIRSGDLDRFFSIQREAMDAAIRLANESGKEGKPAVVLLQKSKTEFQKIWTYGESPYPPARSDLPATSGTPEPAKLADTVG
Ga0075418_102173813	3300009100	Populus Rhizosphere	MTALIQFIVLKREGKWVVKPVDLERFFPIQREAVDAAIRFANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLPMVSRTPEPEKLADTLG*
Ga0066709_1043335061	3300009137	Grasslands Soil	HLGVRWTSLMTAPIQFIVLKYKGKWSIRSGDLDRFFSIQREAMDAAIRLANESGKEGKPAVVLLQKSKTEFQKIWTYGESPYPPARSDLPTTSGTPEPAKLADTLG*
Ga0111538_106424154	3300009156	Populus Rhizosphere	VKSVDLERFFPIQREAVDAAIRFANDSGKEGKPGVVLLQKSKTKFEKIWTYGQSPYPPARSDLPMRTPEPEKLADTLG*
Ga0126374_106630232	3300009792	Tropical Forest Soil	MSAVIQFLVLRRDNQWVVKSGDLERLFSIQREAVDAAIRFANDSGKEGKPGVVLFQKSKSEFEKIWTYGEDSYPPTKSDLPLTRGTPEPGKLVDTIG*
Ga0126373_103844314	3300010048	Tropical Forest Soil	MPQRALPNEHHRQFLVLKREGKWIVKSKDLERVFSVQREAVDAAIKLANDSGKEGKPGVVLFQKSKTEFEKIWTYGESPYPPVRSGLPAMSGTPEPRKLTDALG*
Ga0126321_10530332	3300010145	Soil	MTAPIQFIVLKYKGKWSIKSRDLERIFSMQREAMDAAIRLANESGKEGKPAVVLFQKSKTEFQKIWTYGESPYPPARSDLPATSGTSEPAKLADAVG*
Ga0127503_100534092	3300010154	Soil	MTAVIQFLVLKRQDKWVVKSKDLERFFSIKRQAVDAAIRLANDSGKEGKPGAVLFQKSKTKFDTIWTYGENSYPPARSDLPRMLGTPAPAKLADTLG*
Ga0127503_102414301	3300010154	Soil	MTALIQFIVLKREGVVKSNDLERVFSVQREAVDAAIRFANDSGKEGKPGVVLLQKSKTKFEKIWTYGQSPYPPARSDLPMVSGTPEKLAGTLGSY*
Ga0127503_112506181	3300010154	Soil	YVVFGSFDQMTGAVQFIVLKRDDKWVVKSGDLERVFLAKRDAVAAAIRFANDSGKEGKPSVVLFQKSKAEFQSIWMYGQSPYPPTKSDLPATSATSKPRKLAHTLS*
Ga0134084_103100631	3300010322	Grasslands Soil	MTAPIQFIVPKYKGKWSIRSGDLDRFFSIQREAMDAAIRLANESGKEGKPAVVLLQKSKTEFQKIWTYGESPYPPARSDLPTTSGTPEPAKLADTVG*
Ga0126370_103041712	3300010358	Tropical Forest Soil	MSAVIQFLVLKRDNQWVVKSSDLERLFSIQREAVDAAIRFANDSGKEGKPGVVLFQKSKSEFERIWTYGEDSYPPAKSDLPATSGTPSREN*
Ga0126376_108582081	3300010359	Tropical Forest Soil	SAVIQFLVLKRDNQWVVKSRDLERLFSIQREAVDAAIRFANDSGKEGKPGVVLFQKSKSEFEKIWTYGEDSYPPAKSDLPATSGTPEPGKLAETVG*
Ga0126372_108173052	3300010360	Tropical Forest Soil	MSAVIQFLVLKRDNQWVVKSSDLERLFSIQREAVDAAIRFANDSGKEGKPGVVLFQKSKSEFERIWTYGEDSYPPAKSDLPATSGTPEPGKLAETVG*
Ga0126372_108202091	3300010360	Tropical Forest Soil	MTAVVQFIVLKRRDKWVLKSKDLERIFSRQRETVDAAIRFANDTGKEGNPAVVLFQKSKTRFEKIWTYGESPYPPARSDLPMMMLGTAEPG*
Ga0126372_110228221	3300010360	Tropical Forest Soil	MPQQVYQMNTVVQFIVLKREGKWGVKSKDLERVFSVQREAVDAAIKLANECGKEGKPGVVLFQKSKTEFEKIWTYGESAGEIRVPCDVGTPEPRKLTVALG*
Ga0126372_129936481	3300010360	Tropical Forest Soil	MTAVIQFIVLKRRDKWVLKSKDLERTFSRQREAVDAAVRFANDSGKEGNPAVVLFQRSKTKFEKIWTYGESPYPPARSDLPMVMLGTAEPAKLADTLG*
Ga0126378_116522842	3300010361	Tropical Forest Soil	MTAVVQFIVLKRRGKWLLKSKDLERIFSGQREAVDAAIRFANDSGKEGNPAVVMFQKSKTKFEKIWTYGESPYPPARSDLPMMMLGRTEPAKLADAGS*
Ga0126378_118213181	3300010361	Tropical Forest Soil	MPQRALPNEHHRQFLVLKREGKWIVKSKDLERVFSIQREAVDAAIKLANDSGKEGKPGVVLFQKSKTEFEKIWAYGECPYPPVRSDLSAMSGGPEPGKLADTLS*
Ga0126378_131637691	3300010361	Tropical Forest Soil	MTALIQFIVLKRRDKWVLKSKDLERTFSRQREAVDAAIRFANDSGKEGKPAVVLFQKSKTKFEKIWTYGESPYPPARSDLPMVSGTPEPEKLAGTLG*
Ga0126379_102076973	3300010366	Tropical Forest Soil	MTALIQFIVLKRKGKWVVKSKDLERIFSVQQEAVDAAIRFANDSGKEGKPGVVLFQKSKSKFEKIWTYGKSPYPPPRSDLPMVSRTPEPEKLADTSVSRNTFARPAQAMP*
Ga0126379_103591582	3300010366	Tropical Forest Soil	MNTIVQFIVLKREGKWVVKSKDLERVFSVQREAVDAAIKLANDSGKEGKPGVVLFQKSKTEFEKIWTYGESPYPPVRSDLSAMSGGPEPGKLADTLG*
Ga0126381_1019292201	3300010376	Tropical Forest Soil	IFYLSGLYQMNTLVQFIVLRRKGKWVVKSKDLERVFSVQREAVDAAVKLANDSGKEGKLGVVLFQKSKTEFEKIWTYGESPYPPVRSELPAMSGTPEPGKLTDALG*
Ga0126381_1021156602	3300010376	Tropical Forest Soil	MTAVVQFIVLKRQDKWVVKSRDLERIFSIQRKAVDAAIRFANDTGKEGNPAVVLFQKSKTRFEKIWTYGESPYPPARSDLPMMMLGTAEPG*
Ga0126383_100571963	3300010398	Tropical Forest Soil	MGAIVQFIVLKRDDKWVVKADDQERFFSVQREAVDAAIRLANDSGKEGNPGVVLLQKSKADYKKIWTYGEDSYPPVRTDLPPMSGTPEPGKLADSFG*
Ga0126383_101683404	3300010398	Tropical Forest Soil	MSAVIQFLVLKRDNQWVVKSSDLERLFSIQREAVDAAIRFANDSGKEGKPGVVLFQKSKSEFERIWTYGEDSYPPAKSDLPATSGKPEPGKLAETVG*
Ga0137364_112133601	3300012198	Vadose Zone Soil	MTTMVQFIVLKRQGKWVVQCNDLERFFSIQREAVDAAIRFANDSGKEGKPGSVLFQKSKTEFETIWTYGESPYPPQRADLPAMSGTPE
Ga0137363_100842264	3300012202	Vadose Zone Soil	MTAVIQFLVRKRQDKWVVKSKDLERFFSTERQAVDAAIRLANDGGKEGKPGAVLFQKSKTKFETIWTYGENSYPPAGSDLPRTSGTPEPAKLADTLG*
Ga0137376_104222812	3300012208	Vadose Zone Soil	MTALIQFIVLKREGKWVVKSMDLERFFPIQREAVDAAIRFANDSGKEGKAGVVLLQKSKTKFEKIWTYGESPYPPARSDLPIVSRTPGPEKLADTIG*
Ga0137377_103341143	3300012211	Vadose Zone Soil	MTAVVQFIVLKRRDKWVVKSKDLERIFSVRREAVDAAIRFANDSGKEGNPGVVLFQKSKTKFEKIWTYGESPYPPARSDLPMMSGTAEPAKLADTLG*
Ga0137372_105405032	3300012350	Vadose Zone Soil	MTALIQFIVLKREGKWVVKSMDLERFFPIQREAVDAAIRFANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLPMVSRTPEPEKLADTPRLGETLLRCRELMR*
Ga0137371_104637892	3300012356	Vadose Zone Soil	MTAVIQFLVLKRANQWVVKSGDLERLFSIQGQAVDAAIRFANDSGKEGKPGVVLFQKSKSEFEKIWTYGEDSYPPAKSDLPATSETPEPGKLTDTIG*
Ga0137361_119280531	3300012362	Vadose Zone Soil	KWVVKSGDLEKLFSTQREAVDAAIRLANDSGKEGKPGVVLFQKSKSEFETIWRYGESSYPPTKSDLPVTHGTPEPGKLADTIG*
Ga0164303_109567782	3300012957	Soil	MTALIQFIVLKRDGKWVIKSKDLERIFSVQREAGDAAMRFANDSGKEGKPGAVLFQKSKTKFETIWTYGENSYPPAGSDLPRTSGTPEPAKLADTLG*
Ga0126369_101228051	3300012971	Tropical Forest Soil	MPQRALPNEHHRQFLVLKREGKWIVKSKDLERVFSVQREAVDAAIKLANDSGKEGKPGVVLFQKSKTEFEKIWTYGESPYPPVRSDLSAMSGGPEPGKLADTLG*
Ga0126369_103661711	3300012971	Tropical Forest Soil	MTALIQREGKWVVKSKDLERVFSVQREAVDAAIRFANDSGKEGKPGVVLFQKSKTKFEKIWTYGQSPYPLARSDLPMVSWSPEPEKL
Ga0126369_106407232	3300012971	Tropical Forest Soil	MTAVVQFIVLKRGDKWVLKSKNLERAFSIQREAVDAAIRFANNSGKEGNPGVVLFQKSKTKFEKIWTYGESPYPPARSDLPMMSGTAEPAKLANTFG*
Ga0134110_101067062	3300012975	Grasslands Soil	MTAVVQFIVLKRRGKWVVKSKDLERIFSLRREAVDAAIWFANDSGKEGNPGVVLFQKSKTKFEKIWTYGESPYPPARSDLPMMSGTAEPAKLADTLG*
Ga0164307_108382811	3300012987	Soil	IVLKREGKWVVKSKDLERVFSVQREAVDAAIRFANDSGKEGKPGVVLPQKSKTKFEKVWIYGQSPYPPARSDLPIVSRTPEPEKLAGTLG*
Ga0134081_101982532	3300014150	Grasslands Soil	MTAVVQFIVLKRRGKWVVKSKDLERIFSVRREAVDAAIRFANDSGKEGNPGVVLFQKSKTKFEKIWTYGENPYPPARSDLPMMSGTAEPAKLADTLG*
Ga0066655_100394883	3300018431	Grasslands Soil	MTAVVQFIVLKRRGKWVVKSKDLERIFSVRREAVDAAIWFANDSGKEGNPGVVLFQKSKTKFEKIWTYGESPYPPARSDLPMMSGTAEPAKLADTLG
Ga0066655_103447841	3300018431	Grasslands Soil	MTAPIQFIVLKYKGKWSIRSGDLDRFFSIQREAMDAAIRLANESGKEGKPAVVLLQKSKTEFQKIWTYGESPYPPARSDLPATSGTPEPAKLADTVG
Ga0066667_116529292	3300018433	Grasslands Soil	MTTMVQFIVLKRQGKWVVQCNDLERFFSIQREAVDAAIRFANDSGKEGKPGTVLFQKSKTEFETIWTYGESPYPPQRSDLPAMSGTPEPEKLADNLG
Ga0066669_101209553	3300018482	Grasslands Soil	MTAVVQFIVLKRRGKWVVKSKDLERIFSVRREAVDAAIRFANDSGKEGNPGVVLFQKSKTKFEKIWTYGESPYPPARSDLPMMSGTAEPAKLADTLG
Ga0066669_107452942	3300018482	Grasslands Soil	MTTMVQFIVLKRQGKWVVQCNDLERFFSIQREAVDAAIRFANDSGKEGKPGTVLFQKSKTEFETIWTYGESPYPSQRSDLPAMLGTPEPEKLADNLG
Ga0213878_105246342	3300021444	Bulk Soil	MPQQVYQMNTVVQFIVLRREGKWVVKSKDLERVFSVQREAVDAAIKLANDSGKEGKPGVVLFQKSKTKFEKIWTYGESPYPPVRSDLPAMSGTPEPRKLV
Ga0210402_112793312	3300021478	Soil	VYVVFGSFDQMTGAVQFIVLKRDDKWVVKSGDLERVFLAKRDAVAAAIRFANDSGKEGKPSVVLFQKSKAEFQSIWMYGQSPYPPTKSDLPATSATSKPRKLAHTLS
Ga0126371_106013902	3300021560	Tropical Forest Soil	MSAVIQFLVLKRDNQWVVKSSDLERLFSIQREAVDAAIRFANDSGKEGKPGVVLFQKSKSEFEKIWTYGEDSYPPAKSDLPATSGTPEPGKLAETVG
Ga0126371_109507682	3300021560	Tropical Forest Soil	MTAVVQFIVLKRRDKWVLKSKDLERIFSGQREAVDAAIRFANDSGKEGNPAVVIFQKSKTKFEKIWTYGESFYPPARSDLPMMMLGRTEPAKLADARG
Ga0126371_115430591	3300021560	Tropical Forest Soil	MTQVIQFVVLKRENQWVVKSGDLERVFSIQAQAVDVAIRFANDSGKEGKPGVVLFQKSKSEFEKIWTYGEDSYPPAKSDLLTTSRTTEPGKLADTIG
Ga0126371_122642402	3300021560	Tropical Forest Soil	MTALIQREGKWVVKSKDLERVFSVQREAVDAAIRFANDSGKEGKPGVVLFQKSKTKFEKIWTYGQSPYPPARSDLPIESRTLEPEKLAGTLGRRNTFARPPATAVNYKGDAR
Ga0207684_115099501	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTTVIQFLVLKRDNKWVVKSGDLERFFSAQREAVDAAIRSANDSGKEGKPGAVLFQKSKSEFETIWTYGEDSYPPTKSDLPLTRGTPEPGKLADTIG
Ga0209240_10662941	3300026304	Grasslands Soil	MTAVIQFLVRKRQDKWVVKSKDLERFFSTERQAVDAAIRLANDSGKEGKPGAVLFQKSKTKFETIWTYGENSYPPAGSDLPRTSGTPEPAKLADTLG
Ga0209470_11743261	3300026324	Soil	MTAVVQFIVLKRRGKWVVKSKDLERIFSVRREAVDAAIRFANDSGKEGNPGVVLFQKSKTKFEKIWTYGESPYPPARSDLPMMSGTAEPAKLA
Ga0209648_102371672	3300026551	Grasslands Soil	MTAVIQFLVRKRQDKWVVKSKDLERFFSTERQAVDAAIRLANDSGKEGKPGAVLFQKSKTKFETIWTYGENSYPPAGSDLPRTSGTPEPAKLADPLG
Ga0209577_107680481	3300026552	Soil	MTAVTQFLVLKRQDKWVVKSKDLERFFSIQQQAVDAAIRLANDSGKEGKPGAVLFQKSKTEFETIWTYGENSYPPARSDLPRMSGAPAPAKLADTLG
Ga0209382_102658844	3300027909	Populus Rhizosphere	MTALIQFIVLKREGKWVVKSVDLERFFPIQREAVDAAIRFANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLPMVSRTPEPEKLADTLG
Ga0307278_100176624	3300028878	Soil	LGARISKAKDLERFFSIHREAVDAAIRSANDSGKEGKPGVVLVQRSKTEFQKIWTYGESPYLPTKSDLPMMSGTPERRKLAETLG
Ga0222749_102951281	3300029636	Soil	VYVVFGSFDQMTGAVQFIVLKRADKWVVKSGDLERVFLAKRDAVAAAIRFANDSGKEGKPSVVLFQKSKADFQSIWMYGQSPYPPTKSDLSATSATSKPRKLAHTLS
Ga0310915_106764941	3300031573	Soil	MSALIQFIVLKCEGRWVVKSMDLERFFPIQRQAINAAIRFANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLP
Ga0306917_102155462	3300031719	Soil	MSALIQFIVLKCEGRWVVKSMDLERFFPIQRQAINAAIRFANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLPVVSRTPEPKKLADILG
Ga0306925_106620152	3300031890	Soil	LIQFIVLKCEGRWVVKSMDLERFFPIQRQAINAAIRYANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLPVVSRTPEPKKLADILG
Ga0310912_107695721	3300031941	Soil	MSALIQFIVLKCEGRWVVKSMDLERFFPIQRQAINAAIRYANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLPVVSRTPEPKK
Ga0310910_101007552	3300031946	Soil	MSALIQFIVLKCEGRWVVKSMDLERFFPIQRQAINAAIRYANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLPVVSRTPEPKKLADILG
Ga0310911_102874011	3300032035	Soil	IKSKDLERVFSVQWEAVDAAIRFANDSGKEGKPGVVLLQKSKTKFEKVWTYGQSPYPPGRSDLPILSSTPEPEKLAGTLG
Ga0310911_106909491	3300032035	Soil	ALIQFIVLKCEGRWVVKSMDLERFFPIQRQAINAAIRFANDSGKEGKPGVVLLQKSKTKFEKIWTYGESPYPPARSDLPVVSRTPEPKKLADILG
Ga0307472_1006864741	3300032205	Hardwood Forest Soil	KSGDLEKLFSTQREAVDAAIRLANDSGKEGKPGVVLFQKSKSEFETIWRYGESSYPPTKSDSPVTHGTPKPGKLTDTIG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064529

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences