NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F064554

Metagenome Family F064554

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F064554
Family Type Metagenome
Number of Sequences 128
Average Sequence Length 53 residues
Representative Sequence IGSYIAGLTTRLFEGNDTAVLTRAFGIFAGVTLLAAIILAVLTPLIKRMTPRAQ
Number of Associated Samples 109
Number of Associated Scaffolds 128

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.44 %
% of genes from short scaffolds (< 2000 bps) 95.31 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (95.312 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere
(11.719 % of family members)
Environment Ontology (ENVO) Unclassified
(39.062 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.938 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 53.66%    β-sheet: 0.00%    Coil/Unstructured: 46.34%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 128 Family Scaffolds
PF00930DPPIV_N 36.72
PF14026DUF4242 1.56
PF07676PD40 1.56
PF13414TPR_11 0.78
PF06831H2TH 0.78
PF00854PTR2 0.78
PF07927HicA_toxin 0.78
PF13011LZ_Tnp_IS481 0.78

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 128 Family Scaffolds
COG0823Periplasmic component TolB of the Tol biopolymer transport systemIntracellular trafficking, secretion, and vesicular transport [U] 36.72
COG1506Dipeptidyl aminopeptidase/acylaminoacyl peptidaseAmino acid transport and metabolism [E] 36.72
COG0266Formamidopyrimidine-DNA glycosylaseReplication, recombination and repair [L] 0.78
COG1724Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase familyGeneral function prediction only [R] 0.78
COG3104Dipeptide/tripeptide permeaseAmino acid transport and metabolism [E] 0.78

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms95.31 %
UnclassifiedrootN/A4.69 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_101257513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium501Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101422730All Organisms → cellular organisms → Bacteria → Acidobacteria829Open in IMG/M
3300000550|F24TB_15968284All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300000953|JGI11615J12901_10205080All Organisms → cellular organisms → Bacteria → Acidobacteria532Open in IMG/M
3300000955|JGI1027J12803_104166425Not Available703Open in IMG/M
3300004114|Ga0062593_100101700All Organisms → cellular organisms → Bacteria2029Open in IMG/M
3300004114|Ga0062593_102635974Not Available571Open in IMG/M
3300004157|Ga0062590_101928313All Organisms → cellular organisms → Bacteria → Acidobacteria610Open in IMG/M
3300004643|Ga0062591_102328246All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300005167|Ga0066672_10351393All Organisms → cellular organisms → Bacteria → Acidobacteria963Open in IMG/M
3300005175|Ga0066673_10591620All Organisms → cellular organisms → Bacteria → Acidobacteria646Open in IMG/M
3300005178|Ga0066688_10174266All Organisms → cellular organisms → Bacteria → Acidobacteria1357Open in IMG/M
3300005289|Ga0065704_10527758All Organisms → cellular organisms → Bacteria → Acidobacteria625Open in IMG/M
3300005293|Ga0065715_10066695All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005293|Ga0065715_10351734All Organisms → cellular organisms → Bacteria → Acidobacteria950Open in IMG/M
3300005294|Ga0065705_10069508All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300005294|Ga0065705_10501249All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300005331|Ga0070670_100269077All Organisms → cellular organisms → Bacteria1487Open in IMG/M
3300005343|Ga0070687_100942033All Organisms → cellular organisms → Bacteria → Acidobacteria622Open in IMG/M
3300005353|Ga0070669_100790506All Organisms → cellular organisms → Bacteria → Acidobacteria806Open in IMG/M
3300005354|Ga0070675_100496348All Organisms → cellular organisms → Bacteria1099Open in IMG/M
3300005364|Ga0070673_100629330All Organisms → cellular organisms → Bacteria981Open in IMG/M
3300005438|Ga0070701_10016413Not Available3442Open in IMG/M
3300005440|Ga0070705_100210826All Organisms → cellular organisms → Bacteria1339Open in IMG/M
3300005440|Ga0070705_101121669All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300005440|Ga0070705_101632641All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300005441|Ga0070700_100353355All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300005444|Ga0070694_101164911All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M
3300005445|Ga0070708_101401064All Organisms → cellular organisms → Bacteria → Acidobacteria652Open in IMG/M
3300005458|Ga0070681_11480508All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300005467|Ga0070706_100813518All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300005471|Ga0070698_100204131Not Available1912Open in IMG/M
3300005536|Ga0070697_100019693All Organisms → cellular organisms → Bacteria5330Open in IMG/M
3300005544|Ga0070686_100126833All Organisms → cellular organisms → Bacteria1760Open in IMG/M
3300005545|Ga0070695_100787925All Organisms → cellular organisms → Bacteria → Acidobacteria761Open in IMG/M
3300005545|Ga0070695_101379460All Organisms → cellular organisms → Bacteria → Acidobacteria584Open in IMG/M
3300005546|Ga0070696_101833331All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300005552|Ga0066701_10561236All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300005564|Ga0070664_101825124All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300005598|Ga0066706_11406083All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300005617|Ga0068859_100339033All Organisms → cellular organisms → Bacteria → Acidobacteria1597Open in IMG/M
3300005617|Ga0068859_102687945All Organisms → cellular organisms → Bacteria → Acidobacteria547Open in IMG/M
3300005618|Ga0068864_102256441All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300005718|Ga0068866_11035092All Organisms → cellular organisms → Bacteria585Open in IMG/M
3300005719|Ga0068861_101675089All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300005842|Ga0068858_101050081All Organisms → cellular organisms → Bacteria → Acidobacteria799Open in IMG/M
3300005843|Ga0068860_100266128All Organisms → cellular organisms → Bacteria1672Open in IMG/M
3300005985|Ga0081539_10346311All Organisms → cellular organisms → Bacteria → Acidobacteria625Open in IMG/M
3300006049|Ga0075417_10485642All Organisms → cellular organisms → Bacteria → Acidobacteria619Open in IMG/M
3300006796|Ga0066665_10397817All Organisms → cellular organisms → Bacteria → Acidobacteria1136Open in IMG/M
3300006796|Ga0066665_11663231All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300006800|Ga0066660_10986059All Organisms → cellular organisms → Bacteria → Acidobacteria678Open in IMG/M
3300006800|Ga0066660_11007144All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300006806|Ga0079220_10510056All Organisms → cellular organisms → Bacteria → Acidobacteria825Open in IMG/M
3300006871|Ga0075434_101476408All Organisms → cellular organisms → Bacteria → Acidobacteria689Open in IMG/M
3300006904|Ga0075424_101672395All Organisms → cellular organisms → Bacteria → Acidobacteria674Open in IMG/M
3300006904|Ga0075424_101975053All Organisms → cellular organisms → Bacteria → Acidobacteria616Open in IMG/M
3300007788|Ga0099795_10329700All Organisms → cellular organisms → Bacteria → Acidobacteria678Open in IMG/M
3300009088|Ga0099830_11206738All Organisms → cellular organisms → Bacteria → Acidobacteria628Open in IMG/M
3300009093|Ga0105240_12043953All Organisms → cellular organisms → Bacteria → Acidobacteria595Open in IMG/M
3300009137|Ga0066709_100185444All Organisms → cellular organisms → Bacteria → Acidobacteria2714Open in IMG/M
3300009137|Ga0066709_100808856All Organisms → cellular organisms → Bacteria → Acidobacteria1358Open in IMG/M
3300009148|Ga0105243_11860949All Organisms → cellular organisms → Bacteria → Acidobacteria634Open in IMG/M
3300009162|Ga0075423_12617829All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300009174|Ga0105241_10419474All Organisms → cellular organisms → Bacteria → Acidobacteria1177Open in IMG/M
3300009177|Ga0105248_12064574All Organisms → cellular organisms → Bacteria → Acidobacteria648Open in IMG/M
3300009553|Ga0105249_10581671All Organisms → cellular organisms → Bacteria → Acidobacteria1173Open in IMG/M
3300009840|Ga0126313_10807718All Organisms → cellular organisms → Bacteria → Acidobacteria763Open in IMG/M
3300010041|Ga0126312_10507431All Organisms → cellular organisms → Bacteria → Acidobacteria863Open in IMG/M
3300010042|Ga0126314_10106490All Organisms → cellular organisms → Bacteria → Acidobacteria1911Open in IMG/M
3300010047|Ga0126382_10782177All Organisms → cellular organisms → Bacteria → Acidobacteria811Open in IMG/M
3300010159|Ga0099796_10077603All Organisms → cellular organisms → Bacteria → Acidobacteria1212Open in IMG/M
3300010366|Ga0126379_12030969All Organisms → cellular organisms → Bacteria → Acidobacteria677Open in IMG/M
3300010371|Ga0134125_12841575All Organisms → cellular organisms → Bacteria → Acidobacteria526Open in IMG/M
3300010397|Ga0134124_12298703All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium580Open in IMG/M
3300010399|Ga0134127_10338524All Organisms → cellular organisms → Bacteria → Acidobacteria1465Open in IMG/M
3300010400|Ga0134122_11188820All Organisms → cellular organisms → Bacteria → Acidobacteria762Open in IMG/M
3300010401|Ga0134121_11198633All Organisms → cellular organisms → Bacteria → Acidobacteria759Open in IMG/M
3300010401|Ga0134121_12943965All Organisms → cellular organisms → Bacteria → Acidobacteria523Open in IMG/M
3300010403|Ga0134123_10458196All Organisms → cellular organisms → Bacteria → Acidobacteria1188Open in IMG/M
3300010403|Ga0134123_11753783All Organisms → cellular organisms → Bacteria → Acidobacteria673Open in IMG/M
3300011269|Ga0137392_11102620All Organisms → cellular organisms → Bacteria → Acidobacteria651Open in IMG/M
3300012211|Ga0137377_11166027All Organisms → cellular organisms → Bacteria → Acidobacteria700Open in IMG/M
3300012361|Ga0137360_10386952All Organisms → cellular organisms → Bacteria → Acidobacteria1177Open in IMG/M
3300012362|Ga0137361_10966233All Organisms → cellular organisms → Bacteria → Acidobacteria771Open in IMG/M
3300012469|Ga0150984_113175038All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300012929|Ga0137404_11492492All Organisms → cellular organisms → Bacteria → Acidobacteria625Open in IMG/M
3300012930|Ga0137407_11279694All Organisms → cellular organisms → Bacteria → Acidobacteria696Open in IMG/M
3300012948|Ga0126375_10350708All Organisms → cellular organisms → Bacteria → Acidobacteria1047Open in IMG/M
3300012977|Ga0134087_10461984All Organisms → cellular organisms → Bacteria → Acidobacteria631Open in IMG/M
3300012986|Ga0164304_11251421All Organisms → cellular organisms → Bacteria → Acidobacteria602Open in IMG/M
3300013297|Ga0157378_10101284All Organisms → cellular organisms → Bacteria → Acidobacteria2631Open in IMG/M
3300013297|Ga0157378_10398708All Organisms → cellular organisms → Bacteria → Acidobacteria1355Open in IMG/M
3300013297|Ga0157378_11390979All Organisms → cellular organisms → Bacteria → Acidobacteria744Open in IMG/M
3300013297|Ga0157378_12189646All Organisms → cellular organisms → Bacteria → Acidobacteria604Open in IMG/M
3300013306|Ga0163162_13151247All Organisms → cellular organisms → Bacteria → Acidobacteria529Open in IMG/M
3300014745|Ga0157377_11720503All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300015262|Ga0182007_10102221All Organisms → cellular organisms → Bacteria → Acidobacteria950Open in IMG/M
3300015374|Ga0132255_106117847All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300018476|Ga0190274_11952960All Organisms → cellular organisms → Bacteria → Acidobacteria683Open in IMG/M
3300019879|Ga0193723_1194409All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300021344|Ga0193719_10428218All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300024179|Ga0247695_1041602All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300025899|Ga0207642_10594968All Organisms → cellular organisms → Bacteria → Acidobacteria688Open in IMG/M
3300025918|Ga0207662_10103085All Organisms → cellular organisms → Bacteria → Acidobacteria1770Open in IMG/M
3300025925|Ga0207650_10569587Not Available950Open in IMG/M
3300025926|Ga0207659_11483637All Organisms → cellular organisms → Bacteria → Acidobacteria580Open in IMG/M
3300025936|Ga0207670_11226085All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300025942|Ga0207689_11198551All Organisms → cellular organisms → Bacteria → Acidobacteria639Open in IMG/M
3300025945|Ga0207679_11380544All Organisms → cellular organisms → Bacteria → Acidobacteria646Open in IMG/M
3300026023|Ga0207677_11146094All Organisms → cellular organisms → Bacteria → Acidobacteria710Open in IMG/M
3300026075|Ga0207708_10391946All Organisms → cellular organisms → Bacteria → Acidobacteria1147Open in IMG/M
3300026095|Ga0207676_11840107All Organisms → cellular organisms → Bacteria → Acidobacteria604Open in IMG/M
3300026118|Ga0207675_102666521All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300026304|Ga0209240_1140122All Organisms → cellular organisms → Bacteria → Acidobacteria781Open in IMG/M
3300026548|Ga0209161_10526702All Organisms → cellular organisms → Bacteria → Acidobacteria525Open in IMG/M
3300026548|Ga0209161_10557069All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300026552|Ga0209577_10213751All Organisms → cellular organisms → Bacteria → Acidobacteria1473Open in IMG/M
3300027678|Ga0209011_1162784All Organisms → cellular organisms → Bacteria → Acidobacteria623Open in IMG/M
3300027875|Ga0209283_10715587All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300027880|Ga0209481_10701814All Organisms → cellular organisms → Bacteria → Acidobacteria525Open in IMG/M
3300028047|Ga0209526_10422002All Organisms → cellular organisms → Bacteria → Acidobacteria882Open in IMG/M
3300028381|Ga0268264_11995293All Organisms → cellular organisms → Bacteria → Acidobacteria589Open in IMG/M
3300031716|Ga0310813_10845670All Organisms → cellular organisms → Bacteria → Acidobacteria826Open in IMG/M
3300031716|Ga0310813_10996302All Organisms → cellular organisms → Bacteria → Acidobacteria764Open in IMG/M
3300031854|Ga0310904_10235306All Organisms → cellular organisms → Bacteria → Acidobacteria1125Open in IMG/M
3300033480|Ga0316620_11015502All Organisms → cellular organisms → Bacteria → Acidobacteria807Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere11.72%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere7.03%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil6.25%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.69%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.12%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.12%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.12%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.12%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.34%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.34%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.34%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.56%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.56%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.56%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.78%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.78%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.78%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.78%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.78%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.78%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.78%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.78%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.78%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.78%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300024179Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300033480Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_BEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10125751323300000364SoilYIAGRTTQIFQQGTPEVLTRAFGIFTGVTLAAALLLAVLTPLIKRMTPRTEAG*
INPhiseqgaiiFebDRAFT_10142273013300000364SoilISIGSYIAGRTTQLXEKGTPXVLTXAFGIFAGXTLAAALLLAVLXPXIKKMTPRANAA*
F24TB_1596828423300000550SoilWFLSISIGSYIAGLTTRLFEGNDPSVLTRAFGIFAGITLLAAAILAVLTPLIKRITPKAA
JGI11615J12901_1020508013300000953SoilTTRLFEGNDPSVLTKAFGIFAGITLVAALILAVLTPLIKRLTPRAA*
JGI1027J12803_10416642523300000955SoilRLFEGNDTAVLTKAFFIFAGVTLLAAVILLVITPIIKRMTPRAAE*
Ga0062593_10010170013300004114SoilVWFLSIAIGSYIAGLTTRLFEGNSPDTLAKAFGTFAAISLAAALLLAVLTPLIKKMIPKES*
Ga0062593_10263597413300004114SoilSISIGSYIAGLTTQLFEGNSTVVLTKAFGIFAAITLAAAVILAVITPLIKKMTPHGEAA*
Ga0062590_10192831323300004157SoilGSYIAGRTTQLFEQGTPEVLTRAFGIFAGVTLAAALLLALLTPLIKKMTPRANAA*
Ga0062591_10232824623300004643SoilTTRLFEGNDSWVLVRGFGIFAGITLLAAAILAVLTPLIKRMTPRSI*
Ga0066672_1035139323300005167SoilYIAGLTTRLFAGNDPWVLTKGFATFAAITLFGALVLAVLTPFIKKLIPREAI*
Ga0066673_1059162013300005175SoilLFEQGTPEVLTRAFGIFAGITLAAALLLAVITPLIRKMTPRAESA*
Ga0066688_1017426613300005178SoilTTQLFEKGTPEVLTRAFGIFAGITLAAALLLAVLTPLIRKMTPRADSA*
Ga0065704_1052775823300005289Switchgrass RhizosphereTRLFEGNDTAVLVRGFGIFAGITLVAAVILLVLTPLIKRMTPRSV*
Ga0065715_1006669523300005293Miscanthus RhizosphereISIGSYIAGLATGLFAGNDTGALTRGFGIFAGITLLAAIILAVLTPLIKRMTPRAQ*
Ga0065715_1035173413300005293Miscanthus RhizosphereLFSGNDTAILVRGFGIFAGITLVAAIILAVLTPLIKRMTPRSI*
Ga0065705_1006950813300005294Switchgrass RhizosphereIGSYIAGLATGLFAGNDTSALTRGFGIFAGITLLAAIILAVLTPFIKRMTPRAQ*
Ga0065705_1050124913300005294Switchgrass RhizosphereWFLSISIGSYIAGLATRLFEGNNPAVLTRAFSIFAGVTLLAAIILLILTPLIKKMTPKAA
Ga0070670_10026907723300005331Switchgrass RhizosphereSLFVAGTPQVLTHAFGIFAGITLAAALLLALITPLINKMTPRPESK*
Ga0070687_10094203323300005343Switchgrass RhizosphereSISIGSYIAGLAARLFEGNDTAVLTRAFGIFAGITLLAAIVLAILTPLIKKLTPRAQ*
Ga0070669_10079050613300005353Switchgrass RhizosphereSIGSYIAGLTTRFFAGNDPAILTRAFGIFAAITLVAAFVLMLLTPLIKKMTPRAA*
Ga0070675_10049634813300005354Miscanthus RhizosphereVWFLSISIGSYIAGLATRLFEGNDTAVLTKAFFIFAGVTLLAAVILLVITPIIKRMTPRAAE*
Ga0070673_10062933023300005364Switchgrass RhizosphereISIGSYIAGLATGLFAGNDTSALTRGFGIFAGITLLAAIILAVLTPFIKRMTPRAQ*
Ga0070701_1001641313300005438Corn, Switchgrass And Miscanthus RhizosphereSYIAGLTTRLFEGNDSAVLTKGFAIFAGITLAGALVLAILTPFIKKLIPREAI*
Ga0070705_10021082633300005440Corn, Switchgrass And Miscanthus RhizosphereFLSISVGSYIAGRTTQLFEAGTPQVLTRAFGIFAGISLAAALLLALLTPLIKKMTPAPEKA*
Ga0070705_10112166923300005440Corn, Switchgrass And Miscanthus RhizosphereISIGSYIAGLTTRLFEGNDTAVLTKGFGIFAAITLAGAVILAIITPFIKRLIPQEHF*
Ga0070705_10163264123300005440Corn, Switchgrass And Miscanthus RhizosphereGSFIAGLAARLFEGNNTAVLTRAFSMFAGVTLLAAIILLILTPLIKKMTPKAS*
Ga0070700_10035335523300005441Corn, Switchgrass And Miscanthus RhizosphereLSISIGSYIAGLTTRLFEGNDSAVLTKGFGIFAAITLAGAVILAILTPFIKRLIPRETF*
Ga0070694_10116491123300005444Corn, Switchgrass And Miscanthus RhizosphereSYIAGLTTRFFAGNDPAVLTRAFGIFAGITLVAAFVLALLTPLIKKMTPRAA*
Ga0070708_10140106423300005445Corn, Switchgrass And Miscanthus RhizosphereTRLFEGNSTAVLTKAFGIFAAITLAAAIILAVITPLIKKLTPREAV*
Ga0070681_1148050823300005458Corn RhizosphereGSYIAGRTSALFEKGTPEILTRAFGIFAGITLAAALLLAVLTPLIKKMTPQADSA*
Ga0070706_10081351823300005467Corn, Switchgrass And Miscanthus RhizosphereLSISIGSYIAGLTTRLFAGNAQGVLTRAFGMFAVITLIAALVLALLTPLIKKLTPRSA*
Ga0070698_10020413113300005471Corn, Switchgrass And Miscanthus RhizosphereRTTQLFQGNTPGLLARVFAIFAAITLLAALVLALLTPLIKKMTPRAE*
Ga0070697_10001969313300005536Corn, Switchgrass And Miscanthus RhizosphereAGRTTQLFQGSTPGLLTRAFGIFAAITLVAALLLTLLTPLIKKMTPRAE*
Ga0070686_10012683313300005544Switchgrass RhizosphereGSYIAGLTTRLFEGNDPSVLTKAFGIFAGITLVAALILAVLTPLIKRLTPRAA*
Ga0070695_10078792513300005545Corn, Switchgrass And Miscanthus RhizosphereIGSYIAGLTTRLFQGNDASVLTRGFGIFAGITLLAAAILAVLTPLIKRMTPRSI*
Ga0070695_10137946023300005545Corn, Switchgrass And Miscanthus RhizosphereSFIAGLTTRLFQGNDSWVLVRGFGIFAGITLVAAVILAFLTPLIKRMTPRSI*
Ga0070696_10183333113300005546Corn, Switchgrass And Miscanthus RhizosphereLAARLFEGNDTAVLTRAFGIFAGITLLAAIVLAVLTPLIKKMTPRAQ*
Ga0066701_1056123613300005552SoilSIGSYIAGLTTRLFAGNAQGVLTRAFGTFAVITLIAALVLALLTPLIKKLTPRTA*
Ga0070664_10182512423300005564Corn RhizosphereLTTRLFEGNDTSVLTRGFGIFAVVTLVAAIILAILTPLIKRMTPRAQ*
Ga0066706_1140608323300005598SoilGSYIAGRTTQLFEKGTPEVLTRAFGIFAGITLAAALLLAVITPLIRKMTPRAESA*
Ga0068859_10033903313300005617Switchgrass RhizosphereIGSYIAGLATRLFEGNDTAVLTKASFIFAGVTLLAALILLVITPIIKRMTPRAAE*
Ga0068859_10268794513300005617Switchgrass RhizosphereTRLFAGNDTAVLTRGFGIFAGVTLVAAVILAVLTPVIKRMTPRAQ*
Ga0068864_10225644113300005618Switchgrass RhizosphereTRLFAGNDPWVLTRGFGIFAGVTLFAAVILAVLTPLIKKMTPKAV*
Ga0068866_1103509223300005718Miscanthus RhizosphereVWFLSISIGSYIAGLTTRLFEGNDNAVLTKGFAIFAGITLFATLVLAVLTPLIKKLIPREVS*
Ga0068861_10167508913300005719Switchgrass RhizosphereAGRTTSLFVAGTPEVLTRAFGIFAGIRLAAALLLALLTPLINKMTPRPEAT*
Ga0068858_10105008113300005842Switchgrass RhizosphereVFAGNDTAVLTRAFGMFAGITLLAAIILAVLTPLIKRMTPRAQ*
Ga0068860_10026612813300005843Switchgrass RhizosphereSISIGSYIAGRTTQLFEQGTPAVLTRAFGIFAGITLAAALLLTVLTPLIKKMTPQTNAS*
Ga0081539_1034631123300005985Tabebuia Heterophylla RhizosphereSISIGSYIAGLTTKLFEGNDSRVLTRGFAIFAGITLFGALVLAVLTPLIKKLIPREAA*
Ga0075417_1048564223300006049Populus RhizosphereIGSYIAGLTTRLFEGSTPGLLARAFGTFAAISLGAALLLGLLTPLIKRMTPKVT*
Ga0066665_1039781723300006796SoilSIGSYIAGLTTKLFAGNSASVLVRGFGIFSAITLAAALILAFLTPSIKKMTPRAE*
Ga0066665_1166323113300006796SoilSIGSYIAGLTTKLFAGNSASVLVRGFGIFSAITLAAALILAVLTPLIKKMTPRAE*
Ga0066660_1098605913300006800SoilGSYIAGLTTRLFEGNDNAVLTRGFATFSAITLFAALVLAVLTPLIKKLIPREVN*
Ga0066660_1100714423300006800SoilISIGSYIAGLTTRLFEGNDTAVLTRGFAIFSVITLVAALVLAVLTPLIKKLIPREAI*
Ga0079220_1051005613300006806Agricultural SoilAGLATGLFAGNDNNALTRGFGIFAGITLFAAIILAVLTPLIKRMTPRAQ*
Ga0075434_10147640813300006871Populus RhizosphereFEQGTPQVLTRAFGIFAGITLAAALLLALLTPLIKKMTPRAETA*
Ga0075424_10167239523300006904Populus RhizosphereGSYIAGRTTQLFEQGTPEILTRAFGIFSGITLAAALLLAILTPLIKKMTPRAQTS*
Ga0075424_10197505323300006904Populus RhizosphereSISIGSYIAGRTTQLFEQGTPEVLTRAFGIFAGITLAAALLLAVITPLIKRMTPPAQAS*
Ga0099795_1032970023300007788Vadose Zone SoilSVGSYIAGRTTQLFEAGTPQVLTRAFGIFAGISLAAALLLALLTPLIKKMTPAPEKA*
Ga0099830_1120673813300009088Vadose Zone SoilYIAALTTRLFEGNDNAVLTRGFAIFAGITLAAALVLAVLTPLIKKLIPREAI*
Ga0105240_1204395323300009093Corn RhizosphereLSISIGSYIAGRTTALFEQGTPAVLTRAFGIFAGITLAAALLLLVLTPLIKKMTPRANAA
Ga0066709_10018544433300009137Grasslands SoilISVGSYIAGRTTQLFEQGTPEVLTRAFGIFAGITLAAALLLAVITPLIRKMTPRAESA*
Ga0066709_10080885613300009137Grasslands SoilISIGSYIAGLTTKLFAGNSASVLVRGFGIFSAITLAAALILAVLTPLIKKMTPRAE*
Ga0105243_1186094913300009148Miscanthus RhizosphereSISIGSYIAGLATGLFAGNDNHALTRGFGIFAGITLLAAIILAVLTPLIKRMTPRAQ*
Ga0075423_1261782913300009162Populus RhizosphereLSISIGSYIAGLATGLFAGNDTAALTRGFGIFAGITLVAAIILAILTPLIKRMTPRAQ*
Ga0105241_1041947423300009174Corn RhizosphereSIGSYIAGLTTRLFEGNDPAVLTRAFGMFAGITLLAAIILAFLTPIIKRMTPRAQ*
Ga0105248_1206457423300009177Switchgrass RhizosphereFLSISIGSYIAGLATRLFEGNDTAVLTKAFFIFAGVTLLAALILLVITPIIKRMTPRAAE
Ga0105249_1058167123300009553Switchgrass RhizosphereWFLSISIGSYIAGLATRLFEGNDTAVLTKAFFIFAGVTLLAAVILLVITPIIKRMTPRAAE*
Ga0126313_1080771823300009840Serpentine SoilYIAGLTTRLFEGNDPAVLTRAFGMFAGVTLLAAIILAVLTPLIKKMTPRAQ*
Ga0126312_1050743113300010041Serpentine SoilIGSYIAGLTTRLFEGNDTAVLTRAFGIFAGVTLLAAIILAVLTPLIKRMTPRAQ*
Ga0126314_1010649013300010042Serpentine SoilGLTTRLFEGNDTAVLTRAFGMFAGITLLAAIILAVLTPLIKRMTPRAQ*
Ga0126382_1078217713300010047Tropical Forest SoilSYIAGRTTQLFEQGTPQVLTRAFGIFAGITLAAALLLALLTPLIKKMTPRAEAA*
Ga0099796_1007760313300010159Vadose Zone SoilTTQLFEKGTPEVLTRAFGIFAGITLAAALLLALITPLIKKMTPRAQS*
Ga0126379_1203096923300010366Tropical Forest SoilFFLSISIGSYIAGRTTQIFQEGTPEVLTRAFGIFTAITLAAAVLLMVLTPLIKRMTPRTEAG*
Ga0134125_1284157513300010371Terrestrial SoilTTRFFAGNDPAVLTRAFGIFAAVTLIAAFILALLTPLIKKMTPRAA*
Ga0134124_1229870313300010397Terrestrial SoilIAGRTTQLFEQGTPAILTRAFGIFAGITLASALLLTVLTPLIKRMTPRAEAG*
Ga0134127_1033852423300010399Terrestrial SoilGLTTRLFEGNDNAVLTKGFAIFAGITLAGAVILAILTPLIKKLIPREII*
Ga0134122_1118882023300010400Terrestrial SoilTTQLFEQGTPAVLTRAFGIFAGITLAAALLLTVLTPLIKKMTPQANAS*
Ga0134121_1119863323300010401Terrestrial SoilSIGSYIAGLTTRLFEGNDTAVLTKGFGIFAAITLAGAVILSIITPFIKRLIPQEHF*
Ga0134121_1294396523300010401Terrestrial SoilWFLSISIGSFIAGLTTRLFQGNDSWVLVRGFGIFAGITLVAAVILAFLTPLIKRMTPRSI
Ga0134123_1045819613300010403Terrestrial SoilLTTRLFEGNDNAVLTKGFAIFAGITLFATLVLAVLTPFIKKLIPREAA*
Ga0134123_1175378313300010403Terrestrial SoilRLFEGNDPSVLTRGFGIFAGVTIVAAIILAILTPLIKRMTPRAQ*
Ga0137392_1110262013300011269Vadose Zone SoilLSISIGSYIAGLTTRLFEGGSTVVLTKAFGTFAAITLAAAVILVLITPLIKKLTPRGEAA
Ga0137377_1116602723300012211Vadose Zone SoilLTTRFFEGNDPAILTKAFGIFAAVTLVAALILACLTPVIKKMTPRAT*
Ga0137360_1038695213300012361Vadose Zone SoilSYIAGLTTRLFEGHDTKVLTKGFAIFSVITLVAALILAVLTPLIKKLIPREVI*
Ga0137361_1096623323300012362Vadose Zone SoilGSYIAGLTTRFFAGNDPAVLTRAFGIFAAITLLAALVLAVLTPLIKKMTPKAA*
Ga0150984_11317503813300012469Avena Fatua RhizosphereLFEKGTPDVLTRAFGIFAGITLAAALLLAVLTPLIRKMTPRADAA*
Ga0137404_1149249213300012929Vadose Zone SoilYIAGLTTRFFAGNDAAVLTRAFGTFAAITLMAAILLALLTPVIKKMTPRAS*
Ga0137407_1127969423300012930Vadose Zone SoilSIGSYIAGRTTQLFEKGTPEVLTRAFGIFAGITLAAALLLALLTPLIRKMTPPAEAR*
Ga0126375_1035070813300012948Tropical Forest SoilSYIAGLTTRLFEGNDVGVLTRGFAIFAGITLLGALVLAVLTPLIKRLIPREGN*
Ga0134087_1046198423300012977Grasslands SoilLFEKGTPEVLTRAFGIFAGITLAAALLLALLTPLIRKMTPPAEAR*
Ga0164304_1125142123300012986SoilFLSISIGSYIAGLTTRLFEGNDTGVLVRGFGIFAGITLVAAVILLVLTPLIKKMTPRSV*
Ga0157378_1010128423300013297Miscanthus RhizosphereFLSISIGSYIAGLTTRLFAGNDTAVLTRAFWIFAAVTLAAAFVLAVLTPLIKRMTPRAT*
Ga0157378_1039870813300013297Miscanthus RhizosphereGRTTALFEQGTPAVLTRAFGIFAGVTLAAALLLALLTPLIKKMTPRANAT*
Ga0157378_1139097923300013297Miscanthus RhizosphereTRLFAGNDNAVLVRGFGIFAGITLVAAVILLVLTPLIKRLTPRSIL*
Ga0157378_1218964613300013297Miscanthus RhizosphereGSYIAGLTTRFFAGNDPAVLTRAFGIFAAITLIAAFILALLTPLIKKMTPKAA*
Ga0163162_1315124713300013306Switchgrass RhizosphereGSYIAGLATRLFEGNDTAVLTKAFFIFAGVTLLAALILLVITPIIKRMTPRAAE*
Ga0157377_1172050323300014745Miscanthus RhizosphereSVGSYIAGRTTQLFVAGTPEVLTRAFGIFAGITLAAALLLALITPLINQMTPLSDAT*
Ga0182007_1010222123300015262RhizosphereGSYIAGLTTRLFQGNDPSVLTRGFGIFAGVTIVAAVILAILTPLIKRMTPRAQ*
Ga0132255_10611784713300015374Arabidopsis RhizosphereISVGSYIAGRTTQIFASGTPEVLTRAFGIFAGISLGAALLLAVLTPLIKKMTPRSA*
Ga0190274_1195296023300018476SoilLFEQGTPAVLTRAFGIFAGITLAAALLLALLTPLIKKMTPRANAA
Ga0193723_119440913300019879SoilGSYIAGLTTRLFEGNDNAVLTRGFAIFAGITLAGTLVLAILTPFIKKLIPREAI
Ga0193719_1042821813300021344SoilIAGRTTQLFVAGTPEVLTRAFGIFAGITLAAALLLAVITPLINKMTPRPEST
Ga0247695_104160213300024179SoilRTTQLFEKGTPEVLTRAFGIFAGITLAAALLLALITPLIKKMTPRAQS
Ga0207642_1059496813300025899Miscanthus RhizosphereSIGSYIAGLATGLFAGNDTSALTRGFGIFAGITLLAAIILAVLTPLIKRMTPRAQ
Ga0207684_1072142723300025910Corn, Switchgrass And Miscanthus RhizosphereTTKLFEGNDPAVLTRGFAIFAGITLVGTLVLAILTPFIKKLIPREAQ
Ga0207662_1010308513300025918Switchgrass RhizosphereSISIGSYIAGLAARLFEGNDTAVLTRAFGIFAGITLLAAIILAILTPLIKKLTPRAQ
Ga0207650_1056958723300025925Switchgrass RhizosphereGRTTSLFVAGTPQVLTHAFGIFAGITLAAALLLALITPLINKMTPRPESK
Ga0207659_1148363713300025926Miscanthus RhizosphereWFLSISIGSYIAGLATRLFEGNDTAVLTKAFFIFAGVTLLAALILLVITPIIKRMTPRAA
Ga0207670_1122608523300025936Switchgrass RhizosphereFLSISIGSYIAGLTTRLFEGNDTAVLVRGFGIFAGVTLVAAVILLVLTPLIKKMTPRSV
Ga0207689_1119855123300025942Miscanthus RhizosphereFLSISIGSYIAGLATGLFAGNDTGALTRGFGIFAGITLLAAIILAVLTPLIKRMTPRAQ
Ga0207679_1138054413300025945Corn RhizosphereIAGLTTRLFEGNDTSVLTRGFGIFAVVTLVAAIILAILTPLIKRMTPRAQ
Ga0207677_1114609413300026023Miscanthus RhizosphereTTQLFEQGTPEVLTRAFGIFAGITLAAALLLALITPLIKRMTPRAEAG
Ga0207708_1039194613300026075Corn, Switchgrass And Miscanthus RhizosphereIGSYIAGLATRLFEGNDTSALTRGFGIFAGITLLAAIILLVLTPLIKRMTPRAQ
Ga0207676_1184010723300026095Switchgrass RhizosphereSYIAGLTTRLFEGNDTAVLVRGFGIFAGVTLVAAVILLVLTPLIKKMTPRSV
Ga0207675_10266652113300026118Switchgrass RhizosphereSIAIGSYIAGLTTRLFEGSSPNVLARAFGTFAAISLAAALLLAVLTPLIKKIMPKES
Ga0209240_114012213300026304Grasslands SoilAGLTTRLFEGNSTAVLTKAFGIFAAITLAAAIILAVITPLIKKLTPHGEAA
Ga0209161_1052670213300026548SoilGSYIAGRTTQLFEKGTPEVLTRAFGIFAGITLAAALLLAVITPLIRKMTPRAESA
Ga0209161_1055706913300026548SoilVSYIAGLTTRLFEGNDNAVLTRWFATFAGITLFATLVLAVLTPFIKKLIPREVS
Ga0209577_1021375123300026552SoilGRTTQLFEQGTPQVLTRAFGIFAGITLAAALLLALLTPLIKKMTPRVEVS
Ga0209011_116278423300027678Forest SoilLTTRFFAGNDPAVLTRAFGIFAAITLIAAFILALLTPLIKKMTPRAA
Ga0209283_1071558713300027875Vadose Zone SoilIAGRTTQLFQGNTPAILTRAFGTFAAISLVAALLLAVLTPLIKKMTPRVEAA
Ga0209481_1070181423300027880Populus RhizosphereISIGSYIAGLATRLFEANDPAVLTRAFGIFAGVTLLAALVLAILTPLIKKMTPRAS
Ga0209526_1042200223300028047Forest SoilSISIGSYIAGLTTRFFAGNDAAVLTRAFGTFSAITLMSAILLALLTPLIKKMTPRAS
Ga0268264_1199529323300028381Switchgrass RhizosphereWFLSISIGSYIAGLATRLFEGNDTAVLTKAFFIFAGVTLLAAVILLVITPIIKRMTPRAA
Ga0310813_1084567013300031716SoilLATGLFAGNDNHALVRGFGIFAAITLVAAIILAVLTPLIKRMTPRAQ
Ga0310813_1099630213300031716SoilSYIAGLTTRLFQGNDPSVLTRGFGIFAGVTIVAAVILAILTPLIKRMTPRAQ
Ga0310904_1023530613300031854SoilRLFEGNDPSVLTRAFGIFAGITLLAAAILAVLTPLIKRITPRAA
Ga0316620_1101550213300033480SoilAGLTTRLFQGNDPAVLTRAFGIFSGVTLFAALVLLVLTPLIKKMTPRSA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.