Metagenome / Metatranscriptome Family F064604

Basic Information
Family ID	F064604
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	92 residues
Representative Sequence	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQESARSTSRVA
Number of Associated Samples	120
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.34 %
% of genes near scaffold ends (potentially truncated)	30.47 %
% of genes from short scaffolds (< 2000 bps)	81.25 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (51.562 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.969 % of family members)
Environment Ontology (ENVO)	Unclassified (42.188 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.344 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.68% β-sheet: 30.11% Coil/Unstructured: 60.22%
Feature Viewer

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Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF04392	ABC_sub_bind	10.16
PF00689	Cation_ATPase_C	6.25
PF00702	Hydrolase	5.47
PF13545	HTH_Crp_2	2.34
PF00691	OmpA	2.34
PF05494	MlaC	2.34
PF00588	SpoU_methylase	1.56
PF03372	Exo_endo_phos	1.56
PF04536	TPM_phosphatase	0.78
PF13276	HTH_21	0.78
PF13525	YfiO	0.78
PF07238	PilZ	0.78
PF02371	Transposase_20	0.78
PF02826	2-Hacid_dh_C	0.78
PF11249	DUF3047	0.78
PF01695	IstB_IS21	0.78
PF07589	PEP-CTERM	0.78
PF04321	RmlD_sub_bind	0.78
PF00376	MerR	0.78
PF08282	Hydrolase_3	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	10.16
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	6.25
COG2854	Periplasmic subunit MlaC of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	2.34
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	1.56
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	1.56
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	1.56
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	1.56
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	1.56
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	1.56
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	0.78
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	0.78
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.78
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.78
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.78
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3769	Mannosyl-3-phosphoglycerate phosphatase YedP/MpgP, HAD superfamily	Carbohydrate transport and metabolism [G]	0.78
COG0560	Phosphoserine phosphatase	Amino acid transport and metabolism [E]	0.78
COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	Coenzyme transport and metabolism [H]	0.78

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.56 %
Unclassified	root	N/A	48.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.56 %
Unclassified	root	N/A	48.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.56 %
Unclassified	root	N/A	48.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.44 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	21.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.34 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.44 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	21.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.56 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.44 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	21.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.44 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	19.53 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.44 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	19.53 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9074049	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300002245\|JGIcombinedJ26739_100696844	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300003324\|soilH2_10094997	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8204	Open in IMG/M
3300004156\|Ga0062589_100247493	All Organisms → cellular organisms → Bacteria	1333	Open in IMG/M
3300004479\|Ga0062595_101490604	Not Available	623	Open in IMG/M
3300004480\|Ga0062592_100000662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8081	Open in IMG/M
3300005093\|Ga0062594_102650576	Not Available	554	Open in IMG/M
3300005293\|Ga0065715_10064856	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	718	Open in IMG/M
3300005334\|Ga0068869_100006322	All Organisms → cellular organisms → Bacteria	7499	Open in IMG/M
3300005340\|Ga0070689_100088235	All Organisms → cellular organisms → Bacteria	2441	Open in IMG/M
3300005341\|Ga0070691_10030713	All Organisms → cellular organisms → Bacteria	2517	Open in IMG/M
3300005343\|Ga0070687_100988633	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	609	Open in IMG/M
3300005436\|Ga0070713_101088590	Not Available	772	Open in IMG/M
3300005440\|Ga0070705_100031529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2936	Open in IMG/M
3300005457\|Ga0070662_100899778	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	755	Open in IMG/M
3300005467\|Ga0070706_100770709	Not Available	891	Open in IMG/M
3300005471\|Ga0070698_101588622	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	606	Open in IMG/M
3300005536\|Ga0070697_100932710	Not Available	771	Open in IMG/M
3300005546\|Ga0070696_100576188	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300005549\|Ga0070704_100872004	Not Available	808	Open in IMG/M
3300005586\|Ga0066691_10655633	Not Available	622	Open in IMG/M
3300005616\|Ga0068852_100594622	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300005840\|Ga0068870_10018142	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3393	Open in IMG/M
3300006755\|Ga0079222_12077615	Not Available	561	Open in IMG/M
3300006806\|Ga0079220_10092257	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1549	Open in IMG/M
3300006806\|Ga0079220_10377020	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300006880\|Ga0075429_101648390	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	557	Open in IMG/M
3300006881\|Ga0068865_100137345	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300006954\|Ga0079219_10008594	Not Available	3301	Open in IMG/M
3300009098\|Ga0105245_13055475	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300009143\|Ga0099792_10760647	Not Available	631	Open in IMG/M
3300009148\|Ga0105243_10208250	Not Available	1720	Open in IMG/M
3300009148\|Ga0105243_12624416	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300009176\|Ga0105242_10485069	Not Available	1172	Open in IMG/M
3300009553\|Ga0105249_11185009	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300010362\|Ga0126377_13590384	Not Available	502	Open in IMG/M
3300010375\|Ga0105239_12196861	Not Available	642	Open in IMG/M
3300010403\|Ga0134123_10108697	Not Available	2223	Open in IMG/M
3300011269\|Ga0137392_10364214	Not Available	1198	Open in IMG/M
3300011270\|Ga0137391_10681501	Not Available	856	Open in IMG/M
3300012205\|Ga0137362_10017502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	5440	Open in IMG/M
3300012208\|Ga0137376_10559626	Not Available	990	Open in IMG/M
3300012211\|Ga0137377_10774084	Not Available	893	Open in IMG/M
3300012361\|Ga0137360_10572610	Not Available	965	Open in IMG/M
3300012362\|Ga0137361_10064515	All Organisms → cellular organisms → Bacteria	3077	Open in IMG/M
3300012582\|Ga0137358_10167208	Not Available	1499	Open in IMG/M
3300012685\|Ga0137397_10059459	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2755	Open in IMG/M
3300012917\|Ga0137395_10138131	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1658	Open in IMG/M
3300012922\|Ga0137394_10681293	Not Available	866	Open in IMG/M
3300012925\|Ga0137419_10229580	Not Available	1389	Open in IMG/M
3300012929\|Ga0137404_10130304	Not Available	2068	Open in IMG/M
3300012929\|Ga0137404_10166419	Not Available	1846	Open in IMG/M
3300012930\|Ga0137407_10469750	Not Available	1172	Open in IMG/M
3300012930\|Ga0137407_10880115	Not Available	847	Open in IMG/M
3300012944\|Ga0137410_10121257	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1962	Open in IMG/M
3300012955\|Ga0164298_11564863	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	518	Open in IMG/M
3300013102\|Ga0157371_10060911	All Organisms → cellular organisms → Bacteria	2676	Open in IMG/M
3300014968\|Ga0157379_10762620	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300015052\|Ga0137411_1056708	Not Available	1441	Open in IMG/M
3300015245\|Ga0137409_10253988	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1561	Open in IMG/M
3300015262\|Ga0182007_10121486	All Organisms → cellular organisms → Bacteria	874	Open in IMG/M
3300018000\|Ga0184604_10001835	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3201	Open in IMG/M
3300018028\|Ga0184608_10041632	Not Available	1776	Open in IMG/M
3300018054\|Ga0184621_10269282	Not Available	604	Open in IMG/M
3300018066\|Ga0184617_1003764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2569	Open in IMG/M
3300018076\|Ga0184609_10306560	Not Available	742	Open in IMG/M
3300018422\|Ga0190265_10057798	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3427	Open in IMG/M
3300018429\|Ga0190272_12703444	Not Available	545	Open in IMG/M
3300019259\|Ga0184646_1455145	Not Available	536	Open in IMG/M
3300019269\|Ga0184644_1484811	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	873	Open in IMG/M
3300019865\|Ga0193748_1008484	Not Available	906	Open in IMG/M
3300019878\|Ga0193715_1003435	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3439	Open in IMG/M
3300020001\|Ga0193731_1115841	Not Available	683	Open in IMG/M
3300020003\|Ga0193739_1004697	All Organisms → cellular organisms → Bacteria	3680	Open in IMG/M
3300020006\|Ga0193735_1085599	Not Available	896	Open in IMG/M
3300020070\|Ga0206356_11254277	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300020170\|Ga0179594_10146421	Not Available	872	Open in IMG/M
3300021080\|Ga0210382_10507080	Not Available	534	Open in IMG/M
3300021088\|Ga0210404_10228341	Not Available	1006	Open in IMG/M
3300021088\|Ga0210404_10276995	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300021178\|Ga0210408_10591215	Not Available	879	Open in IMG/M
3300021178\|Ga0210408_11168638	Not Available	589	Open in IMG/M
3300021479\|Ga0210410_11536821	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300021559\|Ga0210409_10857576	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300022195\|Ga0222625_1463282	Not Available	587	Open in IMG/M
3300022531\|Ga0242660_1115325	Not Available	672	Open in IMG/M
3300022534\|Ga0224452_1119428	Not Available	810	Open in IMG/M
3300022756\|Ga0222622_10973150	Not Available	623	Open in IMG/M
3300024224\|Ga0247673_1012977	Not Available	1080	Open in IMG/M
3300024246\|Ga0247680_1037182	Not Available	704	Open in IMG/M
3300025904\|Ga0207647_10337916	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300025910\|Ga0207684_10605480	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300025916\|Ga0207663_10985633	Not Available	676	Open in IMG/M
3300025918\|Ga0207662_10517773	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	823	Open in IMG/M
3300025933\|Ga0207706_10733851	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300025934\|Ga0207686_10261823	All Organisms → cellular organisms → Bacteria	1268	Open in IMG/M
3300025942\|Ga0207689_10322881	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300025945\|Ga0207679_10000343	All Organisms → cellular organisms → Bacteria	33879	Open in IMG/M
3300025960\|Ga0207651_11277432	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	660	Open in IMG/M
3300025961\|Ga0207712_10606325	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300026075\|Ga0207708_10472940	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300026142\|Ga0207698_10543309	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300026482\|Ga0257172_1011561	Not Available	1464	Open in IMG/M
3300026535\|Ga0256867_10192916	Not Available	748	Open in IMG/M
3300026557\|Ga0179587_10645947	Not Available	697	Open in IMG/M
3300027583\|Ga0209527_1106444	Not Available	628	Open in IMG/M
3300027645\|Ga0209117_1008380	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3517	Open in IMG/M
3300027684\|Ga0209626_1122367	Not Available	681	Open in IMG/M
3300027738\|Ga0208989_10213325	Not Available	636	Open in IMG/M
3300027903\|Ga0209488_10181067	All Organisms → cellular organisms → Bacteria	1590	Open in IMG/M
3300027909\|Ga0209382_10287619	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1856	Open in IMG/M
3300028047\|Ga0209526_10052626	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2867	Open in IMG/M
3300028047\|Ga0209526_10179509	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1473	Open in IMG/M
3300028380\|Ga0268265_10101842	All Organisms → cellular organisms → Bacteria	2321	Open in IMG/M
3300028381\|Ga0268264_10479266	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300028592\|Ga0247822_11822996	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	520	Open in IMG/M
3300028791\|Ga0307290_10362022	Not Available	531	Open in IMG/M
3300028814\|Ga0307302_10447309	Not Available	640	Open in IMG/M
3300028828\|Ga0307312_10277596	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300030620\|Ga0302046_11330590	Not Available	561	Open in IMG/M
3300031058\|Ga0308189_10014836	All Organisms → cellular organisms → Bacteria	1717	Open in IMG/M
3300031152\|Ga0307501_10259778	Not Available	520	Open in IMG/M
3300031229\|Ga0299913_11013524	Not Available	796	Open in IMG/M
3300031740\|Ga0307468_101244395	Not Available	674	Open in IMG/M
3300031820\|Ga0307473_10035735	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2218	Open in IMG/M
3300032180\|Ga0307471_102297066	Not Available	680	Open in IMG/M
3300032180\|Ga0307471_102786392	Not Available	620	Open in IMG/M
3300032421\|Ga0310812_10078479	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1325	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.91%
Host-Associated	Host-Associated	21.09%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.31%
Plants	Host-Associated → Plants	21.09%
Aquatic	Environmental → Aquatic	8.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.28%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.81%
Sediment	Environmental → Aquatic → Sediment	5.47%
Freshwater	Environmental → Aquatic → Freshwater	3.12%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.91%
Loam	Environmental → Terrestrial → Soil → Loam	16.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.47%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.12%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.16%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.47%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.47%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.91%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.12%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.12%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.12%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.34%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.56%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.78%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019865	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020001	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_02068990	2088090015	Soil	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPLGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA
JGIcombinedJ26739_1006968441	3300002245	Forest Soil	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVSDWLTDWMDEHGHELPDVEPPQAQESARSTSRVA*
soilH2_100949972	3300003324	Sugarcane Root And Bulk Soil	MVMVGVLAERHPDHVVLSNGVTIAVAEGLMPEGAEFGRSLKITYTTDGDEKRAEDIQLVPDWLIDWMDEHGQELPDVEPPQAQESLRSTSRVA*
Ga0062589_1002474932	3300004156	Soil	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPPAQEPARSTSRVA*
Ga0062595_1014906041	3300004479	Soil	MVGVLAERHPEHVVLSNGVKITVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQESARSTSKVA*
Ga0062592_1000006624	3300004480	Soil	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPLGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA*
Ga0062594_1026505761	3300005093	Soil	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAAFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPPAQEPARSTSRVA*
Ga0065715_100648562	3300005293	Miscanthus Rhizosphere	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA*
Ga0068869_1000063221	3300005334	Miscanthus Rhizosphere	MVMVGVLMERHPEHVVLSNGVKIAVAQGLLPEGAEFGRSLTIRYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPRAQEPARSTSRVA*
Ga0070689_1000882353	3300005340	Switchgrass Rhizosphere	RHPDHVVLSNGVKIAVAEGLLPLGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA*
Ga0070691_100307131	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	RHPDHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA*
Ga0070687_1009886331	3300005343	Switchgrass Rhizosphere	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPLGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAQEPASSTARVA*
Ga0070713_1010885901	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGRAMVMVGVLAERHPDHVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQKSARSTNKVA*
Ga0070705_1000315292	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MVMVGVLAERHPDHVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQKSARSTNKVA*
Ga0070662_1008997782	3300005457	Corn Rhizosphere	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLIDWMDEHGHELSDVEPPPAQEPARSTSRVA*
Ga0070706_1007707091	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPQAQESARSTSRVA*
Ga0070698_1015886221	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKWAEDIQLVSDWLTDWMDEHGHELPDVEPPRAQESAKSTSRVA*
Ga0070697_1009327101	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQKSARSTNKVA*
Ga0070696_1005761882	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPRAQEPARSTSRVA*
Ga0070704_1008720042	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MIMVGVLAERHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA*
Ga0066691_106556331	3300005586	Soil	MVMVGVLAERHPDHVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTIDGDEKRVEDIQLVSDWLIDWMDEHGHELPDLEPPRAQESARSSTSRVV*
Ga0068852_1005946221	3300005616	Corn Rhizosphere	PDHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA*
Ga0068870_100181421	3300005840	Miscanthus Rhizosphere	IMVMVGVLMERHPDHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA*
Ga0079222_120776151	3300006755	Agricultural Soil	MVMVGVLAERHPDHVVLSNGVMIAVAEGLMPEGAEFGRSLWITYTTEGDEKRAEDIQLVPDWLIDWMDEHGQELPDVEAPQAQEPPRSTSRVA*
Ga0079220_100922572	3300006806	Agricultural Soil	MVMVGVLAERHPGHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIKLVPDWLIDWMEEHGHELPDAEPARAQESAGSTSKVA*
Ga0079220_103770201	3300006806	Agricultural Soil	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAQEPASSTARVA*
Ga0075429_1016483901	3300006880	Populus Rhizosphere	IVGRGAMVMVGVLMERHPDHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQDQEPASSTARVA*
Ga0068865_1001373455	3300006881	Miscanthus Rhizosphere	HVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDENRAEDIQLAPDWLIDWMDEHGHELSDVEPPPAQEPARSTSRVA*
Ga0079219_100085941	3300006954	Agricultural Soil	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAQESASSTARVA*
Ga0105245_130554752	3300009098	Miscanthus Rhizosphere	GVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPRAQEPARSTSRVA*
Ga0099792_107606471	3300009143	Vadose Zone Soil	MVASRDLNRRAAMVMVGVLAERHPEHVVLSNGVKITVAEGLLPEGAEFGRSLTITYTTDGEEKRAEDIQLIPDWLADWMDEHGHELPDAEPPRAQESARST
Ga0105243_102082503	3300009148	Miscanthus Rhizosphere	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQESARSTSRVA*
Ga0105243_126244162	3300009148	Miscanthus Rhizosphere	AAMVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAAFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPPAQEPARSTSRVA*
Ga0105242_104850691	3300009176	Miscanthus Rhizosphere	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQESARSTSRVA*
Ga0105249_111850091	3300009553	Switchgrass Rhizosphere	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPPAREPARSTSRVA*
Ga0126377_135903842	3300010362	Tropical Forest Soil	MVIVGVLVERHPDHVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTTEGDEKRAQEIRLVSDWLIDWMDEHGHELPDVKPSRGPESSRSTSRVA*
Ga0105239_121968611	3300010375	Corn Rhizosphere	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLIDWMDEHGHELSDVEPPRAQEPARSTSRVA*
Ga0134123_101086972	3300010403	Terrestrial Soil	MVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPRAQEPARSTSRVA*
Ga0137392_103642142	3300011269	Vadose Zone Soil	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVKPPRAQESARSTSRVA*
Ga0137391_106815012	3300011270	Vadose Zone Soil	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTGRVA*
Ga0137362_100175026	3300012205	Vadose Zone Soil	MVMVGVLAERHPEHVVLSNGVKITVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTEWMDEHGHELPDAEPPRAQESARSTSRVA*
Ga0137376_105596261	3300012208	Vadose Zone Soil	MVMVGVLAERHPEHVVLSNGVKITVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLADWMDEHGHELPDAEPPRAQESARSTSRVA*
Ga0137377_107740841	3300012211	Vadose Zone Soil	MVMVGVLAERHPDHVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQEPARSTSRVA*
Ga0137360_105726101	3300012361	Vadose Zone Soil	MVMVGVLAERHPDHVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDLEPPRAQESARSSTSRVA*
Ga0137361_100645154	3300012362	Vadose Zone Soil	MVMVGVLAERHPEHVVLSNGFKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQEPARSTSRVA*
Ga0137358_101672082	3300012582	Vadose Zone Soil	MNRRAAMVMVGVLAERHPEHVVLSNGVKITVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHWHELPDVELPRAQESARSTSRVA*
Ga0137397_100594592	3300012685	Vadose Zone Soil	MVIVGVLAERHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESGRSTSRVA*
Ga0137395_101381313	3300012917	Vadose Zone Soil	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQEPARSTSRVA*
Ga0137394_106812932	3300012922	Vadose Zone Soil	MVASRDLNRRAAMVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA*
Ga0137419_102295801	3300012925	Vadose Zone Soil	MVMVGVLLERHPDHIVLSNGARISVREDLLPEGAAFGRSLTITYLVDGDQKRAEDIKLVPDWLLDWMAEHDVPDVETPSPQVSLRSTIKAA*
Ga0137404_101303043	3300012929	Vadose Zone Soil	MVMVGVLLERHPDHIVLSNGARISVREDLLPEGAAFGRSLTITYLVDGDQKRAEDIKLVPDWLLDWMAEHDVPDVETPSPQVSLRSTIRAA*
Ga0137404_101664192	3300012929	Vadose Zone Soil	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA*
Ga0137407_104697501	3300012930	Vadose Zone Soil	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQESARSTSRVA*
Ga0137407_108801151	3300012930	Vadose Zone Soil	MVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESGRSTSRVA*
Ga0137410_101212571	3300012944	Vadose Zone Soil	MVIVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHEPLDVEPPRAQESARSTSRVA*
Ga0164298_115648631	3300012955	Soil	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPS
Ga0157371_100609112	3300013102	Corn Rhizosphere	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPLGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPSQAEGSASPTARVA*
Ga0157379_107626202	3300014968	Switchgrass Rhizosphere	LSNGVKIAVAEGLLPEGAAFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPPAQEPARSTSRVA*
Ga0137411_10567081	3300015052	Vadose Zone Soil	MVMVGVLLERHPDHIVLSNGARISVREDLLPEGAAFGRSLTITYIVDGDQKRAEDIKLVPDWLLDWMAEHDVPDVETPSPQVSLRSTIKAA*
Ga0137409_102539881	3300015245	Vadose Zone Soil	RVASRDLNRRAAMVMVGVLAERHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHEPLDVEPPRAQESARSTSRVA*
Ga0182007_101214862	3300015262	Rhizosphere	LGRVIMVMVGVLMERHPDHVVLSNGVKIAVAEGLLPLGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA*
Ga0184604_100018353	3300018000	Groundwater Sediment	MVMVGVLAERHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTTRVA
Ga0184608_100416321	3300018028	Groundwater Sediment	MVMVGVLAELHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0184621_102692821	3300018054	Groundwater Sediment	MVMVGVLAELHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEAIQLVPDWLTDWMDEHGHELPEVEPRAQESARSTSRVA
Ga0184617_10037643	3300018066	Groundwater Sediment	MVMVGVLAERHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0184609_103065601	3300018076	Groundwater Sediment	MVMNRRAAMVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0190265_100577985	3300018422	Soil	MVMVGVLAERHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQKPVRSTSRVA
Ga0190272_127034441	3300018429	Soil	MVAMVMVGVLAERHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0184646_14551451	3300019259	Groundwater Sediment	MVMVGVLAERHPDHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0184644_14848112	3300019269	Groundwater Sediment	HPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDAEPPRAQESARSTSRVA
Ga0193748_10084842	3300019865	Soil	MVMVGVLAERHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDAEPP
Ga0193715_10034358	3300019878	Soil	VVVLAERHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0193731_11158412	3300020001	Soil	MVTTRRAAMVMVGVLAERHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0193739_10046972	3300020003	Soil	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0193735_10855991	3300020006	Soil	MVMVGVLAELHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTIDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0206356_112542771	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA
Ga0179594_101464212	3300020170	Vadose Zone Soil	MVIVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVELPRAQESARSTSR
Ga0210382_105070801	3300021080	Groundwater Sediment	RAAMVMVGVLAERHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0210404_102283412	3300021088	Soil	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVSDWLTDWMDEHGHELPDVEPPQAQESARSTSRVA
Ga0210404_102769952	3300021088	Soil	MVMIGVLAERHPDHVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTIDGDEKRAEDIQLVPDWLIDWMDEHGHELPDLEPPRAQESARSSTSRVA
Ga0210408_105912151	3300021178	Soil	MVMVGVLAERHPGYVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESAKSTSRVA
Ga0210408_111686381	3300021178	Soil	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVSDWLTDWMDEHGHELPDVEPPQAQESARS
Ga0210410_115368211	3300021479	Soil	MVMIGVLAERHPDHVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESDAKSTSRVA
Ga0210409_108575761	3300021559	Soil	HPGYVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESDAKSTSRVA
Ga0222625_14632822	3300022195	Groundwater Sediment	MVMVGVLAELHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTTRVA
Ga0242660_11153251	3300022531	Soil	MVMVGVLAERHPGYVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDLEPPRAQESARSSTSRVA
Ga0224452_11194281	3300022534	Groundwater Sediment	MVMVGVLAELHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0222622_109731501	3300022756	Groundwater Sediment	MVGVLAERHPEHVVLSNGVKIVVAEGLLPEGAEFGRSLTITYTIDGDEKRAEDIQLVPDWLTDWMDEHGHELPDAEPPRAQESARSTSRVA
Ga0247673_10129771	3300024224	Soil	VGVLAERHPGHVVLSNGVKIAVAEGLLPEGAGFGRSLTIIYTIDGDEKRAEDIQLVPDWLTNWMDEHEHELPDVERAQESTSRVA
Ga0247680_10371821	3300024246	Soil	MVMVGVLAERHPGHVVLSNGVKIAVAEGLLPEGAGFGRSLTIIYTIDGDEKRAEDIQLVPDWLTNWMDEHEHELPDVERAQESTSRVA
Ga0207647_103379162	3300025904	Corn Rhizosphere	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA
Ga0207684_106054802	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAQEPASSTARVA
Ga0207663_109856331	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PDHVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQKSARSTNKVA
Ga0207662_105177731	3300025918	Switchgrass Rhizosphere	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPLGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAQEPASSTARVA
Ga0207706_107338512	3300025933	Corn Rhizosphere	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPPAQEPARSTSRVA
Ga0207686_102618231	3300025934	Miscanthus Rhizosphere	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0207689_103228812	3300025942	Miscanthus Rhizosphere	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPRAQEPARSTSRVA
Ga0207679_1000034329	3300025945	Corn Rhizosphere	MVMVSVLMERHPDHVVLSNGVKIAVAEGLLPLGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA
Ga0207651_112774322	3300025960	Switchgrass Rhizosphere	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVE
Ga0207712_106063251	3300025961	Switchgrass Rhizosphere	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPPAREPARSTSRVA
Ga0207708_104729402	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVESLQAEGSASPTARVA
Ga0207698_105433092	3300026142	Corn Rhizosphere	HPDHVVLSNGVKIAVAEGLLPLGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA
Ga0257172_10115613	3300026482	Soil	MVMVGVLLERHPDHIVLSNGARISVREDLLPEGAAFGRSLTITYIIDGDQKRAEDIKLVPDWLLDWMAEHDVPDVETPSPQVSLRSTIKAA
Ga0256867_101929161	3300026535	Soil	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDKKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0179587_106459471	3300026557	Vadose Zone Soil	MVMVGVLVERHPDHVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPGVPPRVQESARSTSRVA
Ga0209527_11064441	3300027583	Forest Soil	MVMVGVLVERHPDHVVLSNGVTIAVAEGLLPEGAEFGRSLTITYMTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0209117_10083802	3300027645	Forest Soil	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAQFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0209626_11223672	3300027684	Forest Soil	MVMVGVLAERHPEHVVLSNGVKIAVKEGLLPEGAEFGRSLTITYMTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQESARSTSRVA
Ga0208989_102133251	3300027738	Forest Soil	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQEPARSTSRVA
Ga0209488_101810671	3300027903	Vadose Zone Soil	MVMVGVLAERHPEHVVLSNGVKITVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDAEPPRAQESARSTSRVA
Ga0209382_102876192	3300027909	Populus Rhizosphere	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAQEPASSTARVA
Ga0209526_100526265	3300028047	Forest Soil	MVRETSTGGRLMVMVGVLAERHPEHVVLSNGVKIAVKEGLLPEGAEFGRSLTITYMTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQESARSTS
Ga0209526_101795093	3300028047	Forest Soil	MVMVGVLVERHPDHVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQESARSTS
Ga0268265_101018423	3300028380	Switchgrass Rhizosphere	MVMVGVLMERHPEHVVLSNGVKIAVAEGLLPAGAEFGLSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPPAQEPARSTSRVA
Ga0268264_104792661	3300028381	Switchgrass Rhizosphere	MIMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDENRAEDIQLVPDWLIDWMDEHGHELSDVEPPPAQEPARSTSRVA
Ga0247822_118229961	3300028592	Soil	IMVMVGVLMERHPDHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTADGDEKRAEDIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA
Ga0307290_103620221	3300028791	Soil	MVMVGVLAELHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQES
Ga0307302_104473092	3300028814	Soil	MVMVGVLAERHPEHVVLSNGVKIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPEVEPPRAQESARSTSRVA
Ga0307312_102775961	3300028828	Soil	MVMVGVLAERHPEHVVLSNGVKIVVAEGLLPEGAEFGRSLTITYTIDGDEKRAEDIQLVPDWLTDWMDEHGHELPDAEPPRAQESAR
Ga0302046_113305902	3300030620	Soil	MVMVGVLAERHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQES
Ga0308189_100148361	3300031058	Soil	MVGVLAERHPEHVVLSNGVKIVVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDAEPPRAQESARSTSRVA
Ga0307501_102597781	3300031152	Soil	EHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELSKVEPPRAQESARSTSRVA
Ga0299913_110135241	3300031229	Soil	MVMVGVLVERHPEHVVLSNGVKIAVAKGLLPEGAEYGRSLTITYTTDGDEKRAKDIQLVPDWLTDWMDEHGHELPDVEPPQAQESARSTSRVA
Ga0307468_1012443951	3300031740	Hardwood Forest Soil	MVMVGVLAELHPEHVVLSNGVRIAVAKGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLTDWMDEHGHELPDVEPPRAQ
Ga0307473_100357353	3300031820	Hardwood Forest Soil	MVGVLAERHPGYVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQESARSTSKVA
Ga0307471_1022970661	3300032180	Hardwood Forest Soil	MVMIGVLAERHPDHVVLSNGVTIAVAEGLLPEGAEFGRSLTITYTIDGDEKRAEDIQLVPDWLIDWMDEHGHELPDLEPPRAQEPARSSTSR
Ga0307471_1027863921	3300032180	Hardwood Forest Soil	RHPEHVVLSNGVKIAVAEGLLPEGAEFGRSLTITYTTDGDEKRAEDIQLVPDWLIDWMDEHGHELPDVEPPRAQESARSTSKVA
Ga0310812_100784791	3300032421	Soil	MVMVGVLMERHPDHVVLSNGVKIAVAEGLLPLGAEFGRSLTITYTADGDEKRAENIQLVPDWLIDWMHEHGHELPDVEPSQAEGSASPTARVA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064604

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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