Metagenome / Metatranscriptome Family F064780

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064780
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	43 residues
Representative Sequence	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSSTG
Number of Associated Samples	88
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.66 %
% of genes near scaffold ends (potentially truncated)	96.88 %
% of genes from short scaffolds (< 2000 bps)	96.09 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (39.844 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (33.594 % of family members)
Environment Ontology (ENVO)	Unclassified (92.188 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (96.875 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.43% β-sheet: 0.00% Coil/Unstructured: 68.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF13884	Peptidase_S74	14.06
PF00386	C1q	7.81
PF16778	Phage_tail_APC	3.12
PF07484	Collar	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.38 %
Unclassified	root	N/A	39.84 %
unclassified Hyphomonas	no rank	unclassified Hyphomonas	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Viruses	superkingdom	All Organisms → Viruses	32.81 %
cellular organisms	root	All Organisms → cellular organisms	26.56 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.75 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	7.81 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	3.91 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.75 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.25 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	3.91 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.78 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.09 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.75 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.25 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	3.91 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.78 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.75 %
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	7.81 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.25 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3.91 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.12 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.56 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.78 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.75 %
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	7.81 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.25 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	3.12 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.34 %
Rhodobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae	1.56 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.56 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.56 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.75 %
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	7.81 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.25 %
unclassified Rhodobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae	3.12 %
Podoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae	1.56 %
unclassified Kyanoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae	1.56 %
unclassified Rhodobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae → unclassified Rhodobiaceae	1.56 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.75 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	7.03 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.25 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	2.34 %
unclassified Podoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae	1.56 %
Rhodobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae → unclassified Rhodobiaceae → Rhodobiaceae bacterium	1.56 %
Synechococcus phage S-SRM01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	1.56 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.56 %
Rhodobacteraceae bacterium TMED38	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED38	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.84 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	18.75 %
Candidatus Pelagibacter sp. TMED64	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	6.25 %
uncultured Mediterranean phage	species	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	6.25 %
Rhodobacteraceae bacterium TMED111	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	2.34 %
Puniceispirillum phage HMO-2011	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011	1.56 %
Rhodobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae → unclassified Rhodobiaceae → Rhodobiaceae bacterium	1.56 %
Synechococcus phage S-SRM01	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	1.56 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	1.56 %
Candidatus Pelagibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	0.78 %
Rhodobacteraceae bacterium TMED38	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED38	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Hyphomonas sp.	species	unclassified Hyphomonas → Hyphomonas sp.	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001472\|JGI24004J15324_10003128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6515	Open in IMG/M
3300001472\|JGI24004J15324_10157114	Not Available	519	Open in IMG/M
3300001945\|GOS2241_1007231	All Organisms → Viruses → Predicted Viral	1566	Open in IMG/M
3300001972\|GOS2216_10055684	All Organisms → Viruses → Predicted Viral	1736	Open in IMG/M
3300005057\|Ga0068511_1006818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1414	Open in IMG/M
3300005960\|Ga0066364_10074482	Not Available	1120	Open in IMG/M
3300006351\|Ga0099953_1584325	Not Available	675	Open in IMG/M
3300006735\|Ga0098038_1047272	All Organisms → Viruses	1563	Open in IMG/M
3300006735\|Ga0098038_1115800	All Organisms → Viruses	914	Open in IMG/M
3300006735\|Ga0098038_1266466	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011	538	Open in IMG/M
3300006735\|Ga0098038_1272912	Not Available	530	Open in IMG/M
3300006737\|Ga0098037_1261866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	552	Open in IMG/M
3300006749\|Ga0098042_1071886	All Organisms → cellular organisms → Bacteria	906	Open in IMG/M
3300006749\|Ga0098042_1136508	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	606	Open in IMG/M
3300006749\|Ga0098042_1147019	Not Available	578	Open in IMG/M
3300006754\|Ga0098044_1372138	Not Available	540	Open in IMG/M
3300006789\|Ga0098054_1362720	Not Available	512	Open in IMG/M
3300006802\|Ga0070749_10435028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae → unclassified Rhodobiaceae → Rhodobiaceae bacterium	720	Open in IMG/M
3300006916\|Ga0070750_10000447	All Organisms → cellular organisms → Bacteria	23007	Open in IMG/M
3300006916\|Ga0070750_10435284	Not Available	544	Open in IMG/M
3300006919\|Ga0070746_10473413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	553	Open in IMG/M
3300006921\|Ga0098060_1104760	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300006924\|Ga0098051_1091231	Not Available	821	Open in IMG/M
3300006928\|Ga0098041_1030290	All Organisms → Viruses → Predicted Viral	1763	Open in IMG/M
3300006928\|Ga0098041_1150431	Not Available	749	Open in IMG/M
3300006928\|Ga0098041_1276424	Not Available	535	Open in IMG/M
3300006928\|Ga0098041_1281657	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300006929\|Ga0098036_1193204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	619	Open in IMG/M
3300006929\|Ga0098036_1276184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	507	Open in IMG/M
3300007345\|Ga0070752_1113810	All Organisms → Viruses → Predicted Viral	1144	Open in IMG/M
3300008012\|Ga0075480_10603660	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	519	Open in IMG/M
3300008218\|Ga0114904_1132930	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae → unclassified Podoviridae → Puniceispirillum phage HMO-2011	590	Open in IMG/M
3300009418\|Ga0114908_1081431	All Organisms → Viruses → Predicted Viral	1106	Open in IMG/M
3300009418\|Ga0114908_1113241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300009481\|Ga0114932_10652433	Not Available	614	Open in IMG/M
3300009593\|Ga0115011_11361503	Not Available	620	Open in IMG/M
3300009605\|Ga0114906_1089504	All Organisms → Viruses → Predicted Viral	1118	Open in IMG/M
3300009605\|Ga0114906_1216332	Not Available	636	Open in IMG/M
3300009605\|Ga0114906_1223150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	624	Open in IMG/M
3300009605\|Ga0114906_1279555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	535	Open in IMG/M
3300009620\|Ga0114912_1165195	Not Available	514	Open in IMG/M
3300009677\|Ga0115104_10500872	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	714	Open in IMG/M
3300009679\|Ga0115105_10486690	Not Available	509	Open in IMG/M
3300009703\|Ga0114933_10951008	Not Available	544	Open in IMG/M
3300009790\|Ga0115012_10887878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	728	Open in IMG/M
3300010148\|Ga0098043_1176052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	598	Open in IMG/M
3300010148\|Ga0098043_1182219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	586	Open in IMG/M
3300010148\|Ga0098043_1213022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	532	Open in IMG/M
3300010149\|Ga0098049_1083159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	1007	Open in IMG/M
3300010296\|Ga0129348_1061695	All Organisms → Viruses → environmental samples → uncultured virus	1342	Open in IMG/M
3300010300\|Ga0129351_1353081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	551	Open in IMG/M
3300012920\|Ga0160423_10132362	Not Available	1755	Open in IMG/M
3300012920\|Ga0160423_10323838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1058	Open in IMG/M
3300012920\|Ga0160423_10428988	Not Available	902	Open in IMG/M
3300012920\|Ga0160423_10429171	Not Available	902	Open in IMG/M
3300012920\|Ga0160423_10671879	Not Available	700	Open in IMG/M
3300012920\|Ga0160423_10715841	Not Available	675	Open in IMG/M
3300012920\|Ga0160423_10773844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED38	646	Open in IMG/M
3300012920\|Ga0160423_11204777	Not Available	505	Open in IMG/M
3300012953\|Ga0163179_10372151	All Organisms → Viruses → Predicted Viral	1151	Open in IMG/M
3300012953\|Ga0163179_12076840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300012954\|Ga0163111_11534464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	660	Open in IMG/M
3300013230\|Ga0116814_1054914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhodobiaceae → unclassified Rhodobiaceae → Rhodobiaceae bacterium	525	Open in IMG/M
3300017720\|Ga0181383_1014275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium TMED111	2129	Open in IMG/M
3300017720\|Ga0181383_1096011	Not Available	796	Open in IMG/M
3300017720\|Ga0181383_1177140	Not Available	569	Open in IMG/M
3300017720\|Ga0181383_1214796	Not Available	509	Open in IMG/M
3300017731\|Ga0181416_1047085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	1016	Open in IMG/M
3300017732\|Ga0181415_1045900	Not Available	997	Open in IMG/M
3300017732\|Ga0181415_1061605	Not Available	850	Open in IMG/M
3300017732\|Ga0181415_1132924	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	558	Open in IMG/M
3300017739\|Ga0181433_1062848	Not Available	932	Open in IMG/M
3300017745\|Ga0181427_1118998	Not Available	645	Open in IMG/M
3300017748\|Ga0181393_1049690	All Organisms → Viruses → Predicted Viral	1148	Open in IMG/M
3300017748\|Ga0181393_1060695	All Organisms → Viruses → Predicted Viral	1018	Open in IMG/M
3300017749\|Ga0181392_1158872	All Organisms → Viruses	660	Open in IMG/M
3300017750\|Ga0181405_1111288	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	687	Open in IMG/M
3300017755\|Ga0181411_1074870	Not Available	1020	Open in IMG/M
3300017755\|Ga0181411_1205977	Not Available	551	Open in IMG/M
3300017757\|Ga0181420_1171312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp.	641	Open in IMG/M
3300017759\|Ga0181414_1202447	Not Available	513	Open in IMG/M
3300017764\|Ga0181385_1066873	Not Available	1110	Open in IMG/M
3300017767\|Ga0181406_1053322	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1248	Open in IMG/M
3300017768\|Ga0187220_1051656	All Organisms → Viruses → Predicted Viral	1238	Open in IMG/M
3300017771\|Ga0181425_1056441	All Organisms → Viruses → Predicted Viral	1275	Open in IMG/M
3300017771\|Ga0181425_1179386	Not Available	667	Open in IMG/M
3300017773\|Ga0181386_1230226	Not Available	551	Open in IMG/M
3300017773\|Ga0181386_1259774	Not Available	512	Open in IMG/M
3300017776\|Ga0181394_1129797	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	792	Open in IMG/M
3300020379\|Ga0211652_10067048	Not Available	1077	Open in IMG/M
3300020411\|Ga0211587_10130125	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300020436\|Ga0211708_10112262	Not Available	1072	Open in IMG/M
3300020437\|Ga0211539_10467624	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	525	Open in IMG/M
3300020440\|Ga0211518_10075207	All Organisms → Viruses → Predicted Viral	1847	Open in IMG/M
3300020445\|Ga0211564_10187854	Not Available	1025	Open in IMG/M
3300020469\|Ga0211577_10292992	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae → unclassified Kyanoviridae → Synechococcus phage S-SRM01	1034	Open in IMG/M
3300020471\|Ga0211614_10074884	Not Available	1423	Open in IMG/M
3300022061\|Ga0212023_1017826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	954	Open in IMG/M
3300022065\|Ga0212024_1042674	Not Available	788	Open in IMG/M
3300022072\|Ga0196889_1028354	All Organisms → Viruses → Predicted Viral	1141	Open in IMG/M
3300022074\|Ga0224906_1078470	All Organisms → Viruses → Predicted Viral	1003	Open in IMG/M
3300022074\|Ga0224906_1154004	Not Available	647	Open in IMG/M
3300022178\|Ga0196887_1047717	All Organisms → Viruses → Predicted Viral	1105	Open in IMG/M
3300022929\|Ga0255752_10311421	Not Available	662	Open in IMG/M
3300025086\|Ga0208157_1035078	All Organisms → Viruses → Predicted Viral	1425	Open in IMG/M
3300025101\|Ga0208159_1099736	All Organisms → Viruses → environmental samples → uncultured virus	519	Open in IMG/M
3300025103\|Ga0208013_1123983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	635	Open in IMG/M
3300025108\|Ga0208793_1200146	Not Available	501	Open in IMG/M
3300025127\|Ga0209348_1127864	Not Available	764	Open in IMG/M
3300025128\|Ga0208919_1013379	All Organisms → Viruses → Predicted Viral	3253	Open in IMG/M
3300025132\|Ga0209232_1058697	All Organisms → Viruses → Predicted Viral	1385	Open in IMG/M
3300025132\|Ga0209232_1244074	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	522	Open in IMG/M
3300025137\|Ga0209336_10067868	All Organisms → Viruses → Predicted Viral	1063	Open in IMG/M
3300025137\|Ga0209336_10074583	unclassified Hyphomonas → Hyphomonas sp.	1000	Open in IMG/M
3300025141\|Ga0209756_1063687	All Organisms → Viruses → Predicted Viral	1729	Open in IMG/M
3300025141\|Ga0209756_1094738	Not Available	1302	Open in IMG/M
3300025151\|Ga0209645_1182368	Not Available	630	Open in IMG/M
3300025282\|Ga0208030_1074348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	905	Open in IMG/M
3300025282\|Ga0208030_1148899	Not Available	550	Open in IMG/M
3300025508\|Ga0208148_1120419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. TMED64	541	Open in IMG/M
3300028022\|Ga0256382_1046146	All Organisms → Viruses → Predicted Viral	1007	Open in IMG/M
3300028418\|Ga0228615_1055193	All Organisms → Viruses → Predicted Viral	1185	Open in IMG/M
3300029319\|Ga0183748_1005365	All Organisms → cellular organisms → Bacteria	6094	Open in IMG/M
3300029319\|Ga0183748_1040316	All Organisms → Viruses → Predicted Viral	1410	Open in IMG/M
3300029448\|Ga0183755_1025284	All Organisms → Viruses → Predicted Viral	1860	Open in IMG/M
3300029787\|Ga0183757_1020850	All Organisms → Viruses → environmental samples → uncultured Mediterranean phage	1563	Open in IMG/M
3300032011\|Ga0315316_11328650	Not Available	572	Open in IMG/M
3300032073\|Ga0315315_11735751	Not Available	533	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	51.56%
Strait	Environmental → Aquatic → Marine → Strait	21.88%
Coastal	Environmental → Aquatic → Marine → Coastal	10.94%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.94%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	2.34%
Volcanic	Environmental → Aquatic → Marine → Volcanic	1.56%
Pelagic	Environmental → Aquatic → Marine → Pelagic	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	43.75%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	21.88%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	10.94%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.94%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	7.81%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.56%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	1.56%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.78%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	33.59%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	21.88%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	10.94%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	8.59%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	7.81%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	7.03%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.56%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	1.56%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.56%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	1.56%
Marine Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Water	0.78%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.78%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.78%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.78%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001945	Marine microbial communities from Galapagos, Equador - GS026	Environmental	Open in IMG/M
3300001972	Marine microbial communities from the Sargasso Sea - GS000d	Environmental	Open in IMG/M
3300005057	Marine water microbial communities from the East Sea, Korea with extracellular vesicles - East-Sea-0.2um	Environmental	Open in IMG/M
3300005960	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_A	Environmental	Open in IMG/M
3300006351	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0045m	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006749	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006924	Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300006929	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG	Environmental	Open in IMG/M
3300007345	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300008218	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s6	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300009620	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_51	Environmental	Open in IMG/M
3300009677	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_70_C50_10m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009679	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - CN13ID_155_C17_100m_0.8um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009703	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaG	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300010148	Marine viral communities from the Subarctic Pacific Ocean - 9B_ETSP_OMZ_AT15188_CsCl metaG	Environmental	Open in IMG/M
3300010149	Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300013230	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 10m_Station5_GOM_Metagenome	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017749	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017773	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 9 SPOT_SRF_2010-03-24	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300020379	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)	Environmental	Open in IMG/M
3300020411	Marine microbial communities from Tara Oceans - TARA_B100000131 (ERX556098-ERR599130)	Environmental	Open in IMG/M
3300020436	Marine microbial communities from Tara Oceans - TARA_B100000424 (ERX556009-ERR598984)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020445	Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300022061	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022072	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300022929	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025101	Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025151	Marine viral communities from the Pacific Ocean - ETNP_6_30 (SPAdes)	Environmental	Open in IMG/M
3300025282	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9 (SPAdes)	Environmental	Open in IMG/M
3300025508	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300028418	Seawater microbial communities from Monterey Bay, California, United States - 16D	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24004J15324_100031288	3300001472	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVSQRATSSTGIGASS
JGI24004J15324_101571142	3300001472	Marine	MSKAAELANLIGNINAGGGGVNRNLVINGAMNVSQRGDVT
GOS2241_10072315	3300001945	Marine	MSKAADLANLIGNINAGGGGVNRNVIINGAMNVAQRGTSFTSVGA
GOS2216_100556843	3300001972	Marine	MSKAAELANLIGNINAGGGGVGRNLVVNGAMSVAQ
Ga0068511_10068184	3300005057	Marine Water	MSKAAELANLIGNINAGGGGVNRNLVINGAMNVAQRGTSS
Ga0066364_100744821	3300005960	Marine	MSKAAELANLIGNINAGGGGVNRNLIINGAMNVAQRGTVTGVA
Ga0099953_15843251	3300006351	Marine	MSKAAELANLIGNINAGGGGVNRNLIINGAMNVAQRG
Ga0098038_10472723	3300006735	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSSTGLGA
Ga0098038_11158003	3300006735	Marine	MSKAAELANLIGNINAGGGGVNRNLIINGATNVAQRGTSS
Ga0098038_12664662	3300006735	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTS
Ga0098038_12729122	3300006735	Marine	MSKAAELANLIGNINAGGGGVGRNLFINGAMNVAQRSTSVTGLGASA
Ga0098037_12618662	3300006737	Marine	MSKAAELANLIGNINAGGGSSNRNIFQNGAMNVSQRSTSETGIGSGAVDTYKTLD
Ga0098042_10718863	3300006749	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQR
Ga0098042_11365082	3300006749	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRATSSTGIGASS
Ga0098042_11470193	3300006749	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMTVAQRA
Ga0098044_13721381	3300006754	Marine	MSKAAELANLIGNINAGGGGVGRNLFINGAMNVAQ
Ga0098054_13627202	3300006789	Marine	MSKASELANLIGNINAGGGGVNRNAIINGAMNVAQRGT
Ga0070749_104350283	3300006802	Aqueous	MSKAAELANLIGNINAGGGGVNRNLVINGAMNVAQRGTSSTGLGASG
Ga0070750_1000044739	3300006916	Aqueous	MSKAAELASLIGNINAGGGGVNRNCVINGDMSVSQRATSVSSITGAG
Ga0070750_104352842	3300006916	Aqueous	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVSQRATSATGVGGSSGYFT
Ga0070746_104734132	3300006919	Aqueous	MSKAAELANLIGNINAGGGGVNRNLVINGAMNVAQRGTSSTGLGASGGYFTV
Ga0098060_11047603	3300006921	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRA
Ga0098051_10912311	3300006924	Marine	MSKASELANLIGNINMGGGGVNRNVIINGAMNVSQRGTQTNPSSNAY
Ga0098041_10302906	3300006928	Marine	MSKAADLANLIGNINMGGGGVGRNLFINGAMNVAQRSTSETGLGATAG
Ga0098041_11504311	3300006928	Marine	MSKASELANLIGNINMGGGGVNRNVIINGAMNVSQRGTQTNPS
Ga0098041_12764242	3300006928	Marine	MSKASELANLIGNINAGGGGVNRNLVINGAMNVAQRATSST
Ga0098041_12816572	3300006928	Marine	MSKAAELANLIGNINAGGGGVNRNLIINGAMNVAQR
Ga0098036_11932043	3300006929	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVSARGTSSTGLGSSD
Ga0098036_12761842	3300006929	Marine	MSKAAELANLIGNINAGSPLANKNLVQNGAMLVNQRG
Ga0070752_11138104	3300007345	Aqueous	MSKAAELANLIGNINAGGGGANKNVIINGNMSCSQR
Ga0075480_106036602	3300008012	Aqueous	MSKASDLANLIGNINAGGGGVNRNLIINGAMNVAQRGTSHTGLGGSTGAVYTL
Ga0114904_11329302	3300008218	Deep Ocean	MSKAAELANLIGNINAGGGGVNRNLIINGAMNVSQRGTSFTTVTNGTY
Ga0114908_10814314	3300009418	Deep Ocean	MSKAAELANLIGNINAGGGGVNRNAIINGAMNVAQRQVSATGLGN
Ga0114908_11132413	3300009418	Deep Ocean	MSKAAELANLIGNINAGGGGVNRNAIINGAMNVAQRQVSATGLGNTAD
Ga0114932_106524331	3300009481	Deep Subsurface	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVSQRGTSSTGLGGNAD
Ga0115011_113615032	3300009593	Marine	MSKAAELANLIGNINAGGGGVNRNVLINGAMNVAQRGTSETGVGASSGYFTLD
Ga0114906_10895041	3300009605	Deep Ocean	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGMSSTG
Ga0114906_12163321	3300009605	Deep Ocean	MSKAAELANLIGNINAGGGGANKNVIINGAMNVAQRATSSTGIGGSS
Ga0114906_12231502	3300009605	Deep Ocean	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSSTGIGGSSGYFT
Ga0114906_12795551	3300009605	Deep Ocean	MSKAAELANLIGNINAGGGGANKNVIINGSMNVAQR
Ga0114912_11651951	3300009620	Deep Ocean	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVSQRAVSSTGLGATDGYY
Ga0115104_105008723	3300009677	Marine	MSKAAELASLIGNINAGGGGVNRNVIINGAMNVAQ
Ga0115105_104866902	3300009679	Marine	MSKAAELASLIGNINAGGGGVNRNVIINGAMNVAQRGTSTTGL
Ga0114933_109510082	3300009703	Deep Subsurface	MSKAAELANLIGNINAGGGGVNKNVIINGAMNCSQRSTSAT
Ga0115012_108878783	3300009790	Marine	MSKAAELANLIGNINAGGGGVNRNVLINGAMNVAQRGTSET
Ga0098043_11760521	3300010148	Marine	MSKAADLANLIGNINAGSGGVNRNVLINGATNVCQRSTSVTGIGASASYF
Ga0098043_11822192	3300010148	Marine	MSKASELANLIGNINAGGGGVNRNVLLNGATNVSQRSVSSTGLGASA
Ga0098043_12130222	3300010148	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMTVAQRATS
Ga0098049_10831591	3300010149	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVKQRDNGGFT
Ga0129348_10616953	3300010296	Freshwater To Marine Saline Gradient	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAER
Ga0129351_13530812	3300010300	Freshwater To Marine Saline Gradient	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAERG
Ga0160423_101323621	3300012920	Surface Seawater	MSKASELANLIGNINAGGGGVNRNLIINGAMNVSQRGTSFTTVTNNEYTLD
Ga0160423_103238383	3300012920	Surface Seawater	MSKAAELANLIGNINAGGGGVNRNIIINGAMNVAQRSTSEAVLGGDTDTYRTV
Ga0160423_104289883	3300012920	Surface Seawater	MSKCAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTQTNQTSGY
Ga0160423_104291713	3300012920	Surface Seawater	MSKAAELANLIGNINAGGGGVNRNLIINGAMNVAQRGTSSTSAGF
Ga0160423_106718791	3300012920	Surface Seawater	MTKCAELANLIGNINAGGGGVNRNLIINGAMNVAQR
Ga0160423_107158412	3300012920	Surface Seawater	MSKAAELANLIGNINAGGGGVNRNLIINGAMNVSQRHGTSSVQLSAT
Ga0160423_107738442	3300012920	Surface Seawater	MSKAAELANLIGNINAGGGGVNRNLIINGAMNVSQRGTSFTTVTNNEYTLD
Ga0160423_112047772	3300012920	Surface Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSFTSVTNGQY
Ga0163179_103721511	3300012953	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVFQRGTSETGIGA*
Ga0163179_120768402	3300012953	Seawater	MSKAAELANLIGNINAGGGGVNRNVFVNGATNVCQRSVSS
Ga0163111_115344641	3300012954	Surface Seawater	MSKAAELANLIGNINAGGGGVNRNVLINSAMNVAQRATSSTGIGASSG
Ga0116814_10549142	3300013230	Marine	MSKAAELANLIGNINAGGGGTNKNLLINGDMSVSQ
Ga0181383_10142751	3300017720	Seawater	VSKAAELANLIGNINAGGGGVNRNLVINGAMNVAQRGTSVANT
Ga0181383_10960113	3300017720	Seawater	MSKAAELASLIGNINAGGGGVNRNVIINGAMNVSQRATSAT
Ga0181383_11771401	3300017720	Seawater	MSKAAELANLIGSINAGGGGVNRNVNINGAMNVAQRLHSGAT
Ga0181383_12147962	3300017720	Seawater	MSKAAELANLIGNINAGGGGANKNAIINGAMNVAQRGTSSTGLGASIL
Ga0181416_10470851	3300017731	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSFAD
Ga0181415_10459003	3300017732	Seawater	MSKAAELANLIGNINAGGGRTNRNLVINGAMNVAQRGTSVANTGYQT
Ga0181415_10616053	3300017732	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRNV
Ga0181415_11329242	3300017732	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSST
Ga0181433_10628483	3300017739	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMYVAQR
Ga0181427_11189982	3300017745	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRNVSATGLS
Ga0181393_10496901	3300017748	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSVTGTGTNA
Ga0181393_10606951	3300017748	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVSQRGDVTGKTAASYGG
Ga0181392_11588721	3300017749	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSSTGL
Ga0181405_11112883	3300017750	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVSQRGDVTGKTAASYGGPD
Ga0181411_10748701	3300017755	Seawater	MSKAAELANLIGNINAGGGGVNRNVFINGAMNVAQRGTSFTGQGGSETVDYF
Ga0181411_12059771	3300017755	Seawater	MSKAAELANLIGNINAGGGGANKNAIINGAMNVAQRGTSSTGLGASS
Ga0181420_11713123	3300017757	Seawater	MSKAAELANLIGNINMGGGGVNRNVIINSAMNVAQRGTSTTGIGASS
Ga0181414_12024471	3300017759	Seawater	MSKAAELANLIGNINAGGGGANKNVIINSEMTVSQR
Ga0181385_10668731	3300017764	Seawater	MSKAAELANLIGNINAGGGGVNRNLIINGDMAVAQRGTSSTSVDADGY
Ga0181406_10533221	3300017767	Seawater	MSKASELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSSTGIGASSGY
Ga0187220_10516563	3300017768	Seawater	MSKAAELANLIGNINAGGGGVNRNLIQNGNFVVAQRGTSFSNV
Ga0181425_10564411	3300017771	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRQVSPSF
Ga0181425_11793863	3300017771	Seawater	MSKAAELANLIGNINAGGGGANKNVIINSEMTVSQRGTSF
Ga0181386_12302262	3300017773	Seawater	MSKAAELANLIGNINAGGGGANKNAIINGAMNVAQRGTSS
Ga0181386_12597742	3300017773	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSSTGLGGNADSYHTMD
Ga0181394_11297971	3300017776	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVSQRGDVTGKTAAS
Ga0211652_100670481	3300020379	Marine	MTKCAELANLIGNINAGGGGANKNAIINGSMNVSQRSVSATNR
Ga0211587_101301251	3300020411	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQKG
Ga0211708_101122621	3300020436	Marine	MSKAAELANLIGNINAGGGGVNRNIIINGAMNVAQRRTSASSIGNETV
Ga0211539_104676241	3300020437	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQKGTSHTGLGGS
Ga0211518_100752071	3300020440	Marine	MSKAAELANLIGNINAGGGGVNRNLIINGAMNVAQRSTSVADLGDTN
Ga0211564_101878541	3300020445	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQKGTS
Ga0211577_102929923	3300020469	Marine	MSKAAELANLIGNINAGGGGVNRNLVINGAMNVAQ
Ga0211614_100748843	3300020471	Marine	MSKCAELANLIGNINMGGGGVNRNVLINSAMTVAQRGTSTASVSSGDFFVVDR
Ga0212023_10178261	3300022061	Aqueous	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSTTGLGANGANY
Ga0212024_10426743	3300022065	Aqueous	MSKAAELANLIGNINAGGGGVNRNLIMNGNFVVAQRGTS
Ga0196889_10283544	3300022072	Aqueous	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRG
Ga0224906_10784703	3300022074	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSSTGIGASSG
Ga0224906_11540041	3300022074	Seawater	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSSTGIGASSGYF
Ga0196887_10477174	3300022178	Aqueous	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSTTGLGANGANYS
Ga0255752_103114213	3300022929	Salt Marsh	MSKAAELANLIGNINAGGGGVNRNAIINGDFKVKQRA
Ga0208157_10350781	3300025086	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGT
Ga0208159_10997361	3300025101	Marine	MTKCAELANLIGNINAGGGGANKNAIINGSMNVSQRSTSATNRGD
Ga0208013_11239833	3300025103	Marine	MSKAAELANLIGNINAGGGGVNRNAIINGAMNVAQRGT
Ga0208793_12001462	3300025108	Marine	MSKAAELANLIGNINAGGGGVNRNVLINGAMNVAQRGTSFTGQGGS
Ga0209348_11278641	3300025127	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSTTGLGAD
Ga0208919_10133791	3300025128	Marine	MSKAAELANLIGNINAGSPLANKNLVQNGAMLVNQRGS
Ga0209232_10586974	3300025132	Marine	MSKAAELANLIGNINAGGGGVNRNLIINGDMAVAQ
Ga0209232_12440742	3300025132	Marine	MSKAAELANLIGNINAGGGGANRNYIINSGMRVAQRGTSTTGLQNTG
Ga0209336_100678681	3300025137	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVSQRATSSTGIGASSG
Ga0209336_100745831	3300025137	Marine	MSKAAELANLIGNINAGGGGVNRNLVINGAMNVSQRGDVTGKT
Ga0209756_10636875	3300025141	Marine	MSKAAELANLIGNINMGGGGVNRNVIINGAMNVAQRSAAATGLGANTSTT
Ga0209756_10947383	3300025141	Marine	MSKASELANLIGNINMGGGGVNRNLVINGAMNVAQ
Ga0209645_11823683	3300025151	Marine	MSKASELANLIGNINAGGGGVNRNVIINGAMNVAQRATS
Ga0208030_10743483	3300025282	Deep Ocean	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSSTG
Ga0208030_11488992	3300025282	Deep Ocean	MSKAAELANLIGNINMGGGGVNRNVIINGAMNVAQRGTSSTG
Ga0208148_11204192	3300025508	Aqueous	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQ
Ga0256382_10461461	3300028022	Seawater	MSKAAELANLIGNINAGGGGVNRNIIINGAMNVAQRGTSSTGIGGSS
Ga0228615_10551933	3300028418	Seawater	MSKAAELANLIGNINAGGGGVNRNLVINGAMNVAQRGTSSTGLGASSG
Ga0183748_10053657	3300029319	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQXXXXI
Ga0183748_10403161	3300029319	Marine	MSKAAELANLIGNINAGGGGVNRNVIINGAMNVAQRGTSSTGVGGSDGYF
Ga0183755_10252843	3300029448	Marine	MTRAADLANLIGNINAGGGGVNRNLVINGAMNVAQRGTSSTGLGAT
Ga0183757_10208501	3300029787	Marine	MSKAAELANLIGNINAGGGGVNRNVLINSAMNVAQRATSATG
Ga0315316_113286502	3300032011	Seawater	MSKASELANLIGNINAGGGGVNRNVIINGAMNVAQKGTSHTG
Ga0315315_117357511	3300032073	Seawater	MSKAAELANLIGNINAGGGGVNRNLLINGDMAVAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064780

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences