Metagenome Family F064835

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064835
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	63 residues
Representative Sequence	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNY
Number of Associated Samples	97
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	98.20 %
% of genes near scaffold ends (potentially truncated)	85.16 %
% of genes from short scaffolds (< 2000 bps)	79.69 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.344 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (11.719 % of family members)
Environment Ontology (ENVO)	Unclassified (52.344 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (78.125 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 61.29% β-sheet: 0.00% Coil/Unstructured: 38.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF09926	DUF2158	18.75
PF13545	HTH_Crp_2	5.47
PF00487	FA_desaturase	1.56
PF00076	RRM_1	1.56
PF09579	Spore_YtfJ	0.78
PF09413	DUF2007	0.78
PF08281	Sigma70_r4_2	0.78
PF14534	DUF4440	0.78
PF06537	DHOR	0.78
PF00892	EamA	0.78
PF03372	Exo_endo_phos	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	1.56
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	1.56
COG3488	Uncharacterized conserved protein with two CxxC motifs, DUF1111 family	General function prediction only [R]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
All Organisms	root	All Organisms	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
cellular organisms	root	All Organisms → cellular organisms	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	32.81 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	7.03 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.56 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	3.12 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	1.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.56 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.56 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	3.12 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.56 %
Saprospiria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria	0.78 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	0.78 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.78 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	3.12 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Saprospirales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales	0.78 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.78 %
Alcaligenes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Alcaligenes	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3.12 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.56 %
Lewinellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae	0.78 %
Virgisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium	0.78 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Alcaligenes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Alcaligenes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3.12 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.56 %
Virgisporangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium ochraceum	0.78 %
unclassified Sphingobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → unclassified Sphingobacteriaceae	0.78 %
Flavilitoribacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Flavilitoribacter	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Alcaligenes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Alcaligenes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3.12 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.56 %
Sphingobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → unclassified Sphingobacteriaceae → Sphingobacteriaceae bacterium	0.78 %
Flavilitoribacter nigricans	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Flavilitoribacter → Flavilitoribacter nigricans	0.78 %
Virgisporangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium ochraceum	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Alcaligenes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Alcaligenes	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.34 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3.12 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1.56 %
Flavilitoribacter nigricans DSM 23189 = NBRC 102662	strain	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Flavilitoribacter → Flavilitoribacter nigricans → Flavilitoribacter nigricans DSM 23189 = NBRC 102662	0.78 %
Sphingobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → unclassified Sphingobacteriaceae → Sphingobacteriaceae bacterium	0.78 %
Virgisporangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium ochraceum	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Alcaligenes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Alcaligenes	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_11993651	Not Available	952	Open in IMG/M
3300001139\|JGI10220J13317_11975829	Not Available	563	Open in IMG/M
3300001904\|JGI24736J21556_1017670	All Organisms → cellular organisms → Bacteria → Acidobacteria	1131	Open in IMG/M
3300004157\|Ga0062590_102660255	Not Available	533	Open in IMG/M
3300005290\|Ga0065712_10105236	All Organisms → cellular organisms → Bacteria → Acidobacteria	1943	Open in IMG/M
3300005293\|Ga0065715_10193521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Virgisporangium → Virgisporangium ochraceum	1401	Open in IMG/M
3300005295\|Ga0065707_10657588	Not Available	660	Open in IMG/M
3300005333\|Ga0070677_10227309	Not Available	915	Open in IMG/M
3300005340\|Ga0070689_100097718	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300005345\|Ga0070692_10066668	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300005353\|Ga0070669_101570438	Not Available	572	Open in IMG/M
3300005366\|Ga0070659_100707269	Not Available	872	Open in IMG/M
3300005438\|Ga0070701_10262854	All Organisms → cellular organisms → Bacteria → Acidobacteria	1047	Open in IMG/M
3300005440\|Ga0070705_101338593	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005441\|Ga0070700_100223044	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300005444\|Ga0070694_101057807	Not Available	675	Open in IMG/M
3300005444\|Ga0070694_101097756	Not Available	663	Open in IMG/M
3300005445\|Ga0070708_100331275	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300005455\|Ga0070663_100460434	All Organisms → cellular organisms → Bacteria → Acidobacteria	1050	Open in IMG/M
3300005467\|Ga0070706_101784304	Not Available	559	Open in IMG/M
3300005539\|Ga0068853_101363968	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300005539\|Ga0068853_101694176	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	613	Open in IMG/M
3300005546\|Ga0070696_101914503	Not Available	514	Open in IMG/M
3300005577\|Ga0068857_101006030	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300005577\|Ga0068857_101377858	Not Available	686	Open in IMG/M
3300005578\|Ga0068854_101038229	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300005615\|Ga0070702_100384705	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300005616\|Ga0068852_101639923	Not Available	665	Open in IMG/M
3300005617\|Ga0068859_100338673	All Organisms → cellular organisms → Bacteria → Acidobacteria	1598	Open in IMG/M
3300005617\|Ga0068859_100809143	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300005617\|Ga0068859_101181318	Not Available	842	Open in IMG/M
3300005617\|Ga0068859_101331011	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300005617\|Ga0068859_102576809	Not Available	560	Open in IMG/M
3300005840\|Ga0068870_10168574	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300005841\|Ga0068863_100597069	All Organisms → cellular organisms → Bacteria → Acidobacteria	1092	Open in IMG/M
3300006358\|Ga0068871_100093117	All Organisms → cellular organisms → Bacteria → Acidobacteria	2513	Open in IMG/M
3300006844\|Ga0075428_102148512	Not Available	577	Open in IMG/M
3300006845\|Ga0075421_102416840	Not Available	549	Open in IMG/M
3300006903\|Ga0075426_10225630	All Organisms → cellular organisms → Bacteria → Acidobacteria	1361	Open in IMG/M
3300006931\|Ga0097620_100520513	All Organisms → cellular organisms → Bacteria → Acidobacteria	1284	Open in IMG/M
3300009011\|Ga0105251_10155991	All Organisms → cellular organisms → Bacteria → Acidobacteria	1030	Open in IMG/M
3300009011\|Ga0105251_10499465	Not Available	568	Open in IMG/M
3300009078\|Ga0105106_11065905	Not Available	574	Open in IMG/M
3300009101\|Ga0105247_10193542	All Organisms → cellular organisms → Bacteria → Acidobacteria	1363	Open in IMG/M
3300009101\|Ga0105247_10436473	Not Available	941	Open in IMG/M
3300009147\|Ga0114129_10455465	Not Available	1677	Open in IMG/M
3300009148\|Ga0105243_12714149	Not Available	536	Open in IMG/M
3300009166\|Ga0105100_10704440	Not Available	623	Open in IMG/M
3300009174\|Ga0105241_10343493	All Organisms → cellular organisms → Bacteria → Acidobacteria	1294	Open in IMG/M
3300009174\|Ga0105241_10678187	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300009176\|Ga0105242_13134805	Not Available	513	Open in IMG/M
3300009177\|Ga0105248_10514603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae → Alcaligenes	1349	Open in IMG/M
3300009177\|Ga0105248_12547898	Not Available	583	Open in IMG/M
3300009177\|Ga0105248_12556713	Not Available	582	Open in IMG/M
3300009553\|Ga0105249_10708954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	1067	Open in IMG/M
3300010375\|Ga0105239_12162105	Not Available	647	Open in IMG/M
3300010397\|Ga0134124_11274330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	757	Open in IMG/M
3300010397\|Ga0134124_11490044	Not Available	704	Open in IMG/M
3300010399\|Ga0134127_10551576	All Organisms → cellular organisms → Bacteria → Acidobacteria	1173	Open in IMG/M
3300010399\|Ga0134127_11478318	Not Available	752	Open in IMG/M
3300010399\|Ga0134127_11956111	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300010399\|Ga0134127_12769436	Not Available	570	Open in IMG/M
3300010399\|Ga0134127_13702378	Not Available	502	Open in IMG/M
3300010400\|Ga0134122_10697353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	953	Open in IMG/M
3300010400\|Ga0134122_11764909	Not Available	649	Open in IMG/M
3300011003\|Ga0138514_100138008	Not Available	540	Open in IMG/M
3300011119\|Ga0105246_11297510	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300012899\|Ga0157299_10308975	Not Available	527	Open in IMG/M
3300013306\|Ga0163162_10081772	All Organisms → cellular organisms → Bacteria	3301	Open in IMG/M
3300013306\|Ga0163162_11715975	Not Available	717	Open in IMG/M
3300013306\|Ga0163162_12695963	Not Available	572	Open in IMG/M
3300013308\|Ga0157375_10749170	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → unclassified Sphingobacteriaceae → Sphingobacteriaceae bacterium	1128	Open in IMG/M
3300014325\|Ga0163163_10622411	All Organisms → cellular organisms → Bacteria → Acidobacteria	1143	Open in IMG/M
3300014325\|Ga0163163_12690280	Not Available	555	Open in IMG/M
3300014325\|Ga0163163_12701415	Not Available	553	Open in IMG/M
3300014326\|Ga0157380_10139658	All Organisms → cellular organisms → Bacteria → Acidobacteria	2079	Open in IMG/M
3300014326\|Ga0157380_12084868	Not Available	630	Open in IMG/M
3300014745\|Ga0157377_10312942	All Organisms → cellular organisms → Bacteria → Acidobacteria	1040	Open in IMG/M
3300015373\|Ga0132257_102549980	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300015374\|Ga0132255_103763980	Not Available	645	Open in IMG/M
3300018429\|Ga0190272_12312596	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	580	Open in IMG/M
3300018476\|Ga0190274_12229391	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	645	Open in IMG/M
3300025885\|Ga0207653_10004225	All Organisms → cellular organisms → Bacteria	4511	Open in IMG/M
3300025904\|Ga0207647_10444682	Not Available	727	Open in IMG/M
3300025908\|Ga0207643_10708261	Not Available	651	Open in IMG/M
3300025910\|Ga0207684_10339533	All Organisms → cellular organisms → Bacteria → Acidobacteria	1293	Open in IMG/M
3300025911\|Ga0207654_10359560	All Organisms → cellular organisms → Bacteria → Acidobacteria	1004	Open in IMG/M
3300025911\|Ga0207654_11337033	Not Available	522	Open in IMG/M
3300025918\|Ga0207662_11032768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300025923\|Ga0207681_10661742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	866	Open in IMG/M
3300025932\|Ga0207690_11751892	Not Available	519	Open in IMG/M
3300025936\|Ga0207670_10168773	All Organisms → cellular organisms → Bacteria → Acidobacteria	1639	Open in IMG/M
3300025961\|Ga0207712_10391195	All Organisms → cellular organisms → Bacteria → Acidobacteria	1166	Open in IMG/M
3300026023\|Ga0207677_11032484	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	747	Open in IMG/M
3300026075\|Ga0207708_10206335	All Organisms → cellular organisms → Bacteria → Acidobacteria	1569	Open in IMG/M
3300026075\|Ga0207708_11358113	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Saprospiria → Saprospirales → Lewinellaceae → Flavilitoribacter → Flavilitoribacter nigricans → Flavilitoribacter nigricans DSM 23189 = NBRC 102662	623	Open in IMG/M
3300026078\|Ga0207702_11611632	Not Available	642	Open in IMG/M
3300026088\|Ga0207641_11350749	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300026142\|Ga0207698_11365848	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300026142\|Ga0207698_11973453	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300026944\|Ga0207570_1018389	Not Available	549	Open in IMG/M
3300027637\|Ga0209818_1000139	All Organisms → cellular organisms → Bacteria	16934	Open in IMG/M
3300027691\|Ga0209485_1000298	All Organisms → cellular organisms → Bacteria	15631	Open in IMG/M
3300027886\|Ga0209486_10605591	Not Available	695	Open in IMG/M
3300027907\|Ga0207428_11216454	Not Available	524	Open in IMG/M
3300028380\|Ga0268265_10621313	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300028381\|Ga0268264_10107677	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2435	Open in IMG/M
3300031538\|Ga0310888_10035601	Not Available	2235	Open in IMG/M
3300031858\|Ga0310892_10565833	Not Available	765	Open in IMG/M
3300033412\|Ga0310810_10302857	All Organisms → cellular organisms → Bacteria → Acidobacteria	1716	Open in IMG/M
3300033412\|Ga0310810_10957720	All Organisms → cellular organisms → Bacteria → Acidobacteria	740	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	60.16%
Environmental	Environmental	39.84%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	60.16%
Terrestrial	Environmental → Terrestrial	38.28%
Aquatic	Environmental → Aquatic	1.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	37.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	29.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.56%
Roots	Host-Associated → Plants → Roots	3.91%
Freshwater	Environmental → Aquatic → Freshwater	1.56%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.78%

Habitat	Taxonomy	Distribution
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	25.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.88%
Loam	Environmental → Terrestrial → Soil → Loam	14.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.69%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.91%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.56%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.28%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.69%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.34%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	10.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	9.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	7.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	7.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.91%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.12%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.34%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.34%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	2.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	2.34%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.34%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2	Host-Associated	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300024287	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK31	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026944	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_119936511	3300000891	Soil	MKRDQLKNRSRSAFLVFSLLFGSGMFLSTTARAQRQDDRYERDRDNANQNRRGRDWDRYGNYGGSVELRS
JGI10220J13317_119758292	3300001139	Soil	MNRDQSKNRIAGALLMFALLFGIGIVLSPTAQAQSQDDRYDRGRDNSGQNRRGRDWERYGNYGGSDELRRTALN
JGI24736J21556_10176703	3300001904	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSLLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSELRRTALNA
JGI24736J21556_10484591	3300001904	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNRDDRYTQDRNRSDNGDQ
Ga0062590_1026602551	3300004157	Soil	MKTDQLQNRIGTAFLVFSILFGMGIALSLNVHAQTPDDRYTQDRDRDNRDQDRRGRDWDRYGNYGGSS
Ga0065712_101052361	3300005290	Miscanthus Rhizosphere	MKTNQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDW
Ga0065715_101935212	3300005293	Miscanthus Rhizosphere	MKTDQAQSRIGAAFLVFSMLFGIGIALSLTAQAQSPDDRYNQDRNRDNGDQDRRGRDWDRYGNYGGSSE
Ga0065715_106859042	3300005293	Miscanthus Rhizosphere	MKTNQSQNRIGNAFLVFSMLFGIVIALSMTAQAQNPDDRYTQDRNRSDNGDQ
Ga0065707_106575881	3300005295	Switchgrass Rhizosphere	MKRDQSQNRIGNAFLVFAMLFGIGIALSMTAQAQNQDDRYTRDRNRSDNGDQNQRGRDWDRYGNYG
Ga0070677_102273092	3300005333	Miscanthus Rhizosphere	MKTDQSQNRIGNAFLVFSILFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGN
Ga0070682_1002522883	3300005337	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSLLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGD
Ga0070689_1000977181	3300005340	Switchgrass Rhizosphere	MKRDQLKNRSRSAFLVFSLLFGSGMFLSTTARAQRQDDRYERDRDNANQNRRGRDW
Ga0070692_100666681	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKTDQSQNRIGNAFLVFSLLFGIGIVLGTNTQAQNPDDRYTQDRNRSDNGDKNRRGRDWDRYGNYGGSSELRR
Ga0070669_1015704381	3300005353	Switchgrass Rhizosphere	MKTDQSQNRIGNAFLVFSILFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNR
Ga0070659_1007072691	3300005366	Corn Rhizosphere	MKRDQSQSRIGNAFLVFSMLIGLVLALSMTAQGQYQDDRYKQDRNRSDNGDQNRRGRDWDRYGNYGGSSE
Ga0070701_102628544	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MKTDQSQNRIGNAFLVFSILFGIGIALSMTAQAQNTDDRYIQDLGNQNRRGRDWDRYGNYGGSSELR
Ga0070705_1013385932	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKRDQLKNRSRSAFLVFSLLFGSGMFLSTTARAQRQDDRYERDRDNANQNRRGRDWDRYGNYGGS
Ga0070700_1002230441	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTRSQIMKRDQLKNRSRSAFLVFSLLFGSGMFLSTTARAQRQDDRYERDRDNANQNRRGRDWDRYGNYG
Ga0070694_1010578072	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNRDDRYTQDRNRSDNGDQNRRGRDWDRYGNYG
Ga0070694_1010977562	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MKTDQSQSRIGNAFLVFSLLFGIGIVLGTNTQAQNPDDRYTQDRNRSDNGDQNRRGRDWD
Ga0070708_1003312751	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKRNQFLRRIGGAILAFALLLGIGIALSTAAAQNPDYRYPQDRDRNGNGDQNRRDRNWDRYGNYGGSV
Ga0070663_1004604341	3300005455	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSILFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSS
Ga0070706_1017843041	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MKTDQSQSRIGNAFLVFSLLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGR
Ga0068853_1013639682	3300005539	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSVLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRG
Ga0068853_1016941761	3300005539	Corn Rhizosphere	MKTDQLQNRIGTAFLVFSILFGTGIALSLNAHAQTPDDRYIQDLGRSNGDQDRRGR
Ga0070696_1019145032	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MKRDQPKNRIANAFLVFSLLFGIGLVLAPTARAQDQDDRYNRDRDNGNQ
Ga0070693_1003494791	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MKTGQSQNRIGNAFLAFSILVGIGIALSMTAQAQNPDDRYTQDRNRSD
Ga0068855_1008146261	3300005563	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSLLFGIGIALSMTAQAQNPDDRYTQDRNRSDNAD
Ga0068857_1010060301	3300005577	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRR
Ga0068857_1013778581	3300005577	Corn Rhizosphere	MKTDQSENRVGNAFLAFSILFGIGIALSMTAHAQNPHDRYTQERERSDNGDQSRRGRDWDRYGNYGGS
Ga0068854_1010382291	3300005578	Corn Rhizosphere	MKTDQAQSRIGNAFLVFSILFGIGIAWIMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSELRR
Ga0070702_1003847051	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKRDQLKNRRRSAFLVFSLLFGSGMFLSTTARAQRQDDRYERDRDNANQNRRGRDWDRYGNYGG
Ga0068852_1016399231	3300005616	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSLLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSELRR
Ga0068859_1003386731	3300005617	Switchgrass Rhizosphere	MKTDQSQNRIGNAFLVFSLLFGIGIVLSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNY
Ga0068859_1008091433	3300005617	Switchgrass Rhizosphere	MKTNQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRY
Ga0068859_1011813181	3300005617	Switchgrass Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNRDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSELR
Ga0068859_1013310113	3300005617	Switchgrass Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTHDRARSDNGDQNRRGRNWDRYGNYGGSAELR
Ga0068859_1025768091	3300005617	Switchgrass Rhizosphere	MKTEKSQNRIGNAFLVFSMLFGIVIALSMTAHAQYPDDRYPQDRNRSDNGDQNRRGRDWDRYGNYGGSSELRR
Ga0068861_1018902952	3300005719	Switchgrass Rhizosphere	MKTHQSQNRIGNAFLVFSILFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQ
Ga0068870_101685742	3300005840	Miscanthus Rhizosphere	MKTGQSKNRIRSAFLVFSLLFGLGILLSTTAQAQNQDDRYNRDRDNGNQNRRGREWDRYG
Ga0068863_1005970691	3300005841	Switchgrass Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGS
Ga0097621_1003528744	3300006237	Miscanthus Rhizosphere	MKTGQSQNRIGNAFLAFSILVGIGIALSMTAQAQNPDDRYTQDRNRSDNG
Ga0068871_1000931174	3300006358	Miscanthus Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQERNRSDNGDQNRRGRDWDRYGNYGGSS
Ga0075428_1021485122	3300006844	Populus Rhizosphere	MKRDQSKNRIAGAFLVFSLLFGIGIVLSTTAQAQNPDDRYDRDRHDGNQNRRGRDWDRYGNYG
Ga0075421_1024168401	3300006845	Populus Rhizosphere	MKTDQLQNRIGTAFLVFSILFGTGIALSLNAHAQTPDDRYSQDRDRDNRDQDRRGRDWDRYGNYGGSEE
Ga0075426_102256301	3300006903	Populus Rhizosphere	MKTDQSQSRIGNAFLVFSILFGIGIALSMTSQAQNPDNRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSELRRTAL
Ga0097620_1005205134	3300006931	Switchgrass Rhizosphere	MKTDQSQNRIGNAFLVFSVLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGN
Ga0105251_101559911	3300009011	Switchgrass Rhizosphere	MKTDQSQSRIGNAFLAFSILFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGN
Ga0105251_104994652	3300009011	Switchgrass Rhizosphere	VKTNQSQNGIGNAFLVFSILFGIVIALSMTAHAQNPDDRYTQDRNRSDNGDQNRRGRDWD
Ga0105106_110659051	3300009078	Freshwater Sediment	MKTNWSQSKIGGAILVFSLLFGIGFALSTTAQAQNPDDRYVQDRGNDNGDRNRRGR
Ga0105247_101935421	3300009101	Switchgrass Rhizosphere	MKTGQSQNRIGNAFLAFSMLVGIGIALSMTAQAQNPDDRYSQDRNRSDHGDQNRRGRDWDRYGNYGGSS
Ga0105247_104364731	3300009101	Switchgrass Rhizosphere	MKTDQSQNRIGNAFLVFSLLFGIGIVLSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSE
Ga0114129_104554653	3300009147	Populus Rhizosphere	MKRTQSKKRGRSAFLVFSLLFGIAMVLGTTAQAQNQEDRYRRDRENGSQTRRGRDWDSYGNYGG
Ga0105243_127141491	3300009148	Miscanthus Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGMGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGPDWDRYGNYGGS
Ga0105100_107044401	3300009166	Freshwater Sediment	MKTNWSQSKIGGAILVFSLLFGIGFALSTTAQAQNPDDRYVQDRDRNKNDDSNSRGRNRDQYD
Ga0105241_103434934	3300009174	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAHAQNPDDRYTQDRNRSDNGDQNRRGRDWD
Ga0105241_106781871	3300009174	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYG
Ga0105242_131348051	3300009176	Miscanthus Rhizosphere	MKTDQLQNRIGNAFLVFSMLFGLGIALSMTAKAQNPDDRYTQDRNRSDNGDQNRRGRD
Ga0105248_105146034	3300009177	Switchgrass Rhizosphere	MKTNQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRR
Ga0105248_125478982	3300009177	Switchgrass Rhizosphere	MKTDQSQNRIGNAFLVFSILFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRY
Ga0105248_125567131	3300009177	Switchgrass Rhizosphere	MKTDQSQNRIGNAFLVFSLLFGMGIVLGTNAQAQNPDDRYTQDRNRSDNGDQN
Ga0105249_107089543	3300009553	Switchgrass Rhizosphere	MKSDQLQNRIGTAFLVFSILFGTGIALSLNAHAQTPDDRYNQDRDRDNRNQDRRGRDWDRYGNYGGSSELRRTA
Ga0105239_121621051	3300010375	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNRDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSELRRTAL
Ga0134124_112743302	3300010397	Terrestrial Soil	MKTDQSQNRIGTAFLVFSILFGTGIALSLNAHAQTPDDRYTQDRDRDNRDQDRRGRDWERYGNYGGSSELRRTALTA
Ga0134124_114900441	3300010397	Terrestrial Soil	MKTDQSQSRIGNAFLAFSILFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDW
Ga0134127_105515763	3300010399	Terrestrial Soil	MKTDQSQNRIGNAFLVFSLLFGIGIVLGTNTQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSE
Ga0134127_114783181	3300010399	Terrestrial Soil	MKTDQAQSRIGNAFLVFSILFGIGIAWIMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSE
Ga0134127_119561112	3300010399	Terrestrial Soil	MKTDQSQSRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYSQDRNRSDNVDQNRRGRDWDRYG
Ga0134127_127694361	3300010399	Terrestrial Soil	MKTDQSQNRIGNAFLVFSILFGIGIALTITAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYG
Ga0134127_137023781	3300010399	Terrestrial Soil	MKRTQSKKRSRSAFLVFSLLFGIALVLGTTAQAQNQEDRYRRDRENGEQSRRGRDWDSYGNYGGSSELRSTA
Ga0134122_106973533	3300010400	Terrestrial Soil	MKTDQSQSRIGAAFLVFSMLFGIGIALSLTAQAQNPDDRYTQDRNRDNGDQDRRGRD
Ga0134122_117649091	3300010400	Terrestrial Soil	MKTDQSQNRIGNAFLVFSLLFGIGIVLGTNTQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRY
Ga0138514_1001380081	3300011003	Soil	MKTDQSQSRIGNAFLVFSMLFGIVIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDGYGNYGGSSELRRTALNAG
Ga0105246_112975102	3300011119	Miscanthus Rhizosphere	MKTGQSQNRIGNAFLAFSILVGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWD
Ga0157299_103089751	3300012899	Soil	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNY
Ga0163162_100817723	3300013306	Switchgrass Rhizosphere	MKKDQSQNRIGNAFLVFSLLFGIVIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSS
Ga0163162_117159751	3300013306	Switchgrass Rhizosphere	MKTNQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSELRRTAL
Ga0163162_126959631	3300013306	Switchgrass Rhizosphere	MKTDKSQNRIGNAFLVFSVMFGIVIALSMTAQAQYPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSE
Ga0157375_107491701	3300013308	Miscanthus Rhizosphere	MKTDQSQSRIGVAFLVFSILFGIGIALSMTAQAQNSDDRYTQDRNRSDNGDQNRRGRDWDRYG
Ga0163163_106224111	3300014325	Switchgrass Rhizosphere	MKRDQSKNRIAGAFFLVFSLLFGIGIVLSTTAQAQNQDDRYNRDRDNGNQNRRGRDWDRYGNYGGSVELRRT
Ga0163163_126902802	3300014325	Switchgrass Rhizosphere	VKTNQSQNGIGNAFLVFSILFGIVIALSMTAHAQNPDDRYTQDRNRSDNGDQNRRGRD
Ga0163163_127014151	3300014325	Switchgrass Rhizosphere	MKTDQSQNRVGNAFLVFSLLFGIGIASSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWD
Ga0157380_101396581	3300014326	Switchgrass Rhizosphere	MKTDQSQNRVGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNY
Ga0157380_120848681	3300014326	Switchgrass Rhizosphere	MKTDQSQNRIGNAFLVFSLLFGIGIVLGTNTQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSEL
Ga0157377_103129421	3300014745	Miscanthus Rhizosphere	MKRDQSQNRIGNAFLVFSILLGIGIALSLTAQAQNPDDRYSQDRNRSDNGDQNRHGRDWDRYGNYGGSSELRRTALNA
Ga0182005_12890021	3300015265	Rhizosphere	MKTDQSQNRIGNAFLVFSILFGIGIALSMTAQAQNPDDRYTQDRNRSDNGD
Ga0132257_1025499802	3300015373	Arabidopsis Rhizosphere	MNKESIMKRDQSKNRIAGAFLVFSLLFAIGTVLSTTAQAQNPDDRWVRDRDSVNQDRRGRDWDRYGNYGGSSELRR
Ga0132257_1026770521	3300015373	Arabidopsis Rhizosphere	MKIDQSQNRIGNAFLVFSLLFGIGIALSMTAQAQNPDDRYTQDRNRSDN
Ga0132255_1037639801	3300015374	Arabidopsis Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYSQDRNRSDNVDQNRRGRDW
Ga0190272_123125961	3300018429	Soil	MKADQSQSRIGNAFLVFSLLFGIGIALSTTAQAQNPDDRYTQDRNRSDNGNQNRRGRDWDRYGSRV
Ga0190274_122293911	3300018476	Soil	MKRDQSENKIANAFLVFSLLFGIGLVLSTTARAQNQDDRYDRNRDNRNQDTR
Ga0173479_102539863	3300019362	Soil	MKTDQSQNRIGNAFLVFSMLFGVGIALSMTAQAQNPDDRYTQDRNRSDNGDQ
Ga0182009_101086325	3300021445	Soil	MKTDQSQNRIGNAFLVFSLLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQ
Ga0247690_10115833	3300024287	Soil	MKTDQSQSRIGNAFLAFSILFGIGIALSMTVQAQNPDDRYTQDRNRSDNGD
Ga0207653_100042251	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGDY
Ga0207647_104446821	3300025904	Corn Rhizosphere	MKTDQLQNRIGTAFLVFSILFGTGIALSLNAHAQTPDDRYTQDRDRDYRDQDRRG
Ga0207643_107082611	3300025908	Miscanthus Rhizosphere	MKTDQSQSRIGNAFVVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRRDNEDQNRRGRDWDRYGNYGGSS
Ga0207684_103395331	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKTDQSQSRIGNAFLVFSLLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRD
Ga0207654_103595601	3300025911	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSELRRT
Ga0207654_113370331	3300025911	Corn Rhizosphere	MKTDQSQSRIGNAFVVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSELRRTAL
Ga0207662_110327681	3300025918	Switchgrass Rhizosphere	MKTDQSQNRIGNAFLVFSLLFGIGIALSITAQAQNPDDRYNQDRKRSDNGDQNRHGRDWD
Ga0207681_106617422	3300025923	Switchgrass Rhizosphere	MKTDQSQNRVGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNWDQNR
Ga0207690_117518921	3300025932	Corn Rhizosphere	MKRDQSQSRIGNAFLVFSMLIGLVLALSMTAQGQYQDDRYKQDRNRSDNGDQNRRGRDWDRYG
Ga0207709_108912073	3300025935	Miscanthus Rhizosphere	MKKDQSQSRIGAAFLVFSMLFGIGIALSMTAQAQNQDDRYTQDRNRSDNG
Ga0207670_101687733	3300025936	Switchgrass Rhizosphere	MKRDQLKNRSRSAFLVFSLLFGSGMFLSTTARAQRQDDRYERDRDNANQNRRGRDWDRYG
Ga0207712_103911954	3300025961	Switchgrass Rhizosphere	MKTDQSQNRIGNAFLVFSILFGIGIALSMTAQAQNTDDRYIQDLGNQNRRGRD
Ga0207677_110324841	3300026023	Miscanthus Rhizosphere	MKTDQSQNRIGTAFLVFSILFGTGIALSLNAHAQTPDDRYTQDRDRDNRDQDRRGRDWERYGNYGGSSELRRTALTAGY
Ga0207708_102063351	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKRDQLKNRSRSAFLVFSLLFGSGMFLSTTARAQRQDDRYERDRDNANQNRRGRDWDRYGNYG
Ga0207708_113581131	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKTDQSQSRIGVAFLVFSILFGIGIALSMTAQAQNPDDRYNQDRNRDNGDQNRRGRDWDRYGNYGGSAELRRTAL
Ga0207702_116116321	3300026078	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSELR
Ga0207641_113507491	3300026088	Switchgrass Rhizosphere	MKTDQSQSRIGNAFVVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSELRRTALNAG
Ga0207676_111260961	3300026095	Switchgrass Rhizosphere	MKTDQSQSRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNA
Ga0207698_110244832	3300026142	Corn Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNLSLR
Ga0207698_113658481	3300026142	Corn Rhizosphere	MKRDQLKNRSRSAFLVFSLLFGSGMFLSTTARAQRQDDRYERDRDNANQNRRGRDWDRYGNYGGSAEL
Ga0207698_119734531	3300026142	Corn Rhizosphere	MKTDQLQNRIGTAFLVFSILFGTGIALSLNAHAQTPDDRYIQDLGRNNGDQDRRGRDWD
Ga0207570_10183891	3300026944	Soil	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNR
Ga0209818_10001391	3300027637	Agricultural Soil	MKTDRSKNRSGSAFLVFSLLFGLGMFLSMTAQAQSQDDRYGRDRDSVNQNRRGRDWDR
Ga0209485_10002981	3300027691	Agricultural Soil	MKTDRSKNRSGSAFLVFSLLFGLGMFLSMTAQAQSQDDRYGRDRDSVNQNRRGRDWDRPRGSPKTGHIWSPQNRP
Ga0209073_104934792	3300027765	Agricultural Soil	MKTHQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPNDRYTQDRNRSDSGDQ
Ga0209486_106055912	3300027886	Agricultural Soil	MKRDQSKKRIGNAFLVFSLLFGIGMVLSTNAQAQNQDDRYVRDREYGNQNRRGRDWDRYGNYGG
Ga0207428_112164541	3300027907	Populus Rhizosphere	MKTDQSQNRIGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSE
Ga0268265_106213132	3300028380	Switchgrass Rhizosphere	MKRDQLKNRSRSAFLVFSLLFGSGMFLSTTARAQRQDDRYERDRDNANQNRRGRDWDRY
Ga0268264_101076771	3300028381	Switchgrass Rhizosphere	MKSDQLQNRIGTAFLVFSILFGTGIALSLNAHAQTPDDRYIQDLGRNNGDQDRRGRDWDRYGNYGGSADLRRTAL
Ga0310888_100356012	3300031538	Soil	MKTDQSQNRVGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNWDQNRRGRDWDRYGNYGGSAELRRT
Ga0310892_105658331	3300031858	Soil	MKTDQSQNRVGNAFLVFSMLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRY
Ga0310900_112485543	3300031908	Soil	MKRDQSKNRIANAFLVFSLLFGIGIVLSTTAQAQNPDDRYDRNRDNGNQ
Ga0310810_103028574	3300033412	Soil	MKTDQSQNRIGNAFLVFSLLFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWDRYGNYGGSSELRRTAL
Ga0310810_109577202	3300033412	Soil	MKTDQSQNRIGNAFLVFSILFGIGIALSMTAQAQNPDDRYTQDRNRSDNGDQNRRGRDWD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064835

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences