Metagenome / Metatranscriptome Family F064892

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F064892
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	40 residues
Representative Sequence	GFADGPAAAKHPAHDNLDAMHEWPGDPIAAQHNLWPPVLL
Number of Associated Samples	105
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.34 %
% of genes near scaffold ends (potentially truncated)	96.88 %
% of genes from short scaffolds (< 2000 bps)	89.84 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (65.625 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.781 % of family members)
Environment Ontology (ENVO)	Unclassified (24.219 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.219 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.76% β-sheet: 0.00% Coil/Unstructured: 88.24%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF04185	Phosphoesterase	10.94
PF00294	PfkB	5.47
PF08450	SGL	5.47
PF02771	Acyl-CoA_dh_N	4.69
PF03372	Exo_endo_phos	4.69
PF01259	SAICAR_synt	3.12
PF04542	Sigma70_r2	2.34
PF02481	DNA_processg_A	2.34
PF13231	PMT_2	1.56
PF06114	Peptidase_M78	1.56
PF13368	Toprim_C_rpt	0.78
PF03795	YCII	0.78
PF08281	Sigma70_r4_2	0.78
PF05977	MFS_3	0.78
PF01040	UbiA	0.78
PF01494	FAD_binding_3	0.78
PF00230	MIP	0.78
PF12770	CHAT	0.78
PF00005	ABC_tran	0.78
PF01554	MatE	0.78
PF13522	GATase_6	0.78
PF00248	Aldo_ket_red	0.78
PF13560	HTH_31	0.78
PF00082	Peptidase_S8	0.78
PF03704	BTAD	0.78
PF13936	HTH_38	0.78
PF13649	Methyltransf_25	0.78
PF08241	Methyltransf_11	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	10.94
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	5.47
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	5.47
COG0758	Predicted Rossmann fold nucleotide-binding protein DprA/Smf involved in DNA uptake	Replication, recombination and repair [L]	4.69
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	4.69
COG0152	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Nucleotide transport and metabolism [F]	3.12
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.34
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.34
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.34
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.34
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.56
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.78
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.78
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.78
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.78
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.78
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.78
COG3629	DNA-binding transcriptional regulator DnrI/AfsR/EmbR, SARP family, contains BTAD domain	Transcription [K]	0.78
COG3947	Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains	Transcription [K]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.62 %
Unclassified	root	N/A	34.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.62 %
Unclassified	root	N/A	34.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.62 %
Unclassified	root	N/A	34.38 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.56 %
Unclassified	root	N/A	34.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	51.56 %
Unclassified	root	N/A	34.38 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	38.28 %
Unclassified	root	N/A	34.38 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.81 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.56 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.78 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.78 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.78 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.81 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.56 %
Patulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae	0.78 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.78 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.81 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.56 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	0.78 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.78 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.38 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.81 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.56 %
Patulibacter americanus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter americanus	0.78 %
Nocardioides panacis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	0.78 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.78 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001403\|JGI20205J14842_1008070	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300005332\|Ga0066388_108088683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525	Open in IMG/M
3300005434\|Ga0070709_10047256	All Organisms → cellular organisms → Bacteria	2680	Open in IMG/M
3300005434\|Ga0070709_10353526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1086	Open in IMG/M
3300005445\|Ga0070708_100140762	All Organisms → cellular organisms → Bacteria	2237	Open in IMG/M
3300005518\|Ga0070699_101716596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	575	Open in IMG/M
3300005569\|Ga0066705_10516363	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300005610\|Ga0070763_10126666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1314	Open in IMG/M
3300005618\|Ga0068864_101178025	Not Available	764	Open in IMG/M
3300005952\|Ga0080026_10006663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2694	Open in IMG/M
3300006028\|Ga0070717_10098671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2477	Open in IMG/M
3300006028\|Ga0070717_10505124	Not Available	1093	Open in IMG/M
3300006041\|Ga0075023_100636396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	501	Open in IMG/M
3300006176\|Ga0070765_102107743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300006575\|Ga0074053_11993264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300006806\|Ga0079220_10209088	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300009089\|Ga0099828_11322818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300009177\|Ga0105248_11627252	Not Available	732	Open in IMG/M
3300009792\|Ga0126374_11653254	Not Available	531	Open in IMG/M
3300010048\|Ga0126373_10111053	All Organisms → cellular organisms → Bacteria	2550	Open in IMG/M
3300010048\|Ga0126373_13262986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300010048\|Ga0126373_13321551	Not Available	500	Open in IMG/M
3300010154\|Ga0127503_10469518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1507	Open in IMG/M
3300010337\|Ga0134062_10667477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300010359\|Ga0126376_10476117	All Organisms → cellular organisms → Bacteria	1149	Open in IMG/M
3300010359\|Ga0126376_10623521	Not Available	1024	Open in IMG/M
3300010360\|Ga0126372_12376894	Not Available	580	Open in IMG/M
3300010360\|Ga0126372_12856180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300010361\|Ga0126378_10098805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2875	Open in IMG/M
3300010361\|Ga0126378_11128093	Not Available	884	Open in IMG/M
3300010366\|Ga0126379_11195164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	867	Open in IMG/M
3300010376\|Ga0126381_100680771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1470	Open in IMG/M
3300010376\|Ga0126381_103137328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	654	Open in IMG/M
3300012096\|Ga0137389_11531073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	563	Open in IMG/M
3300012096\|Ga0137389_11715779	Not Available	524	Open in IMG/M
3300012189\|Ga0137388_10204353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1781	Open in IMG/M
3300012201\|Ga0137365_11287419	Not Available	519	Open in IMG/M
3300012204\|Ga0137374_10953198	Not Available	625	Open in IMG/M
3300012207\|Ga0137381_10631086	Not Available	933	Open in IMG/M
3300012210\|Ga0137378_10189290	Not Available	1915	Open in IMG/M
3300012361\|Ga0137360_11277501	Not Available	634	Open in IMG/M
3300012971\|Ga0126369_10064175	All Organisms → cellular organisms → Bacteria	3194	Open in IMG/M
3300012986\|Ga0164304_11365162	Not Available	580	Open in IMG/M
3300012989\|Ga0164305_11798554	Not Available	553	Open in IMG/M
3300014655\|Ga0181516_10317500	Not Available	793	Open in IMG/M
3300016445\|Ga0182038_10151221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1772	Open in IMG/M
3300017926\|Ga0187807_1035228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1550	Open in IMG/M
3300017928\|Ga0187806_1106905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300017932\|Ga0187814_10154661	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300017959\|Ga0187779_10738772	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	668	Open in IMG/M
3300017970\|Ga0187783_11261067	Not Available	532	Open in IMG/M
3300017973\|Ga0187780_10467009	Not Available	899	Open in IMG/M
3300017999\|Ga0187767_10127404	Not Available	738	Open in IMG/M
3300018007\|Ga0187805_10294852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	746	Open in IMG/M
3300018007\|Ga0187805_10494602	Not Available	573	Open in IMG/M
3300018044\|Ga0187890_10487610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300018060\|Ga0187765_11138180	Not Available	544	Open in IMG/M
3300018482\|Ga0066669_10651370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	926	Open in IMG/M
3300020199\|Ga0179592_10103339	All Organisms → cellular organisms → Bacteria	1309	Open in IMG/M
3300021403\|Ga0210397_10233431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1328	Open in IMG/M
3300021403\|Ga0210397_11479580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300021404\|Ga0210389_11517032	Not Available	509	Open in IMG/M
3300021405\|Ga0210387_11462372	Not Available	586	Open in IMG/M
3300021407\|Ga0210383_11044701	Not Available	691	Open in IMG/M
3300021420\|Ga0210394_10665110	Not Available	914	Open in IMG/M
3300021433\|Ga0210391_11099701	Not Available	617	Open in IMG/M
3300021474\|Ga0210390_10671547	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300021477\|Ga0210398_10655961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	850	Open in IMG/M
3300021478\|Ga0210402_10208236	Not Available	1798	Open in IMG/M
3300021560\|Ga0126371_11726960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300024271\|Ga0224564_1020270	Not Available	1202	Open in IMG/M
3300025474\|Ga0208479_1103875	Not Available	515	Open in IMG/M
3300025627\|Ga0208220_1022951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1984	Open in IMG/M
3300025922\|Ga0207646_10635216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	957	Open in IMG/M
3300025922\|Ga0207646_10944005	Not Available	764	Open in IMG/M
3300025929\|Ga0207664_10015470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5539	Open in IMG/M
3300025929\|Ga0207664_10089979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2514	Open in IMG/M
3300027567\|Ga0209115_1134598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300027874\|Ga0209465_10601688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300028906\|Ga0308309_10467995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1087	Open in IMG/M
3300028906\|Ga0308309_11493290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	577	Open in IMG/M
3300029999\|Ga0311339_10413095	Not Available	1403	Open in IMG/M
3300030524\|Ga0311357_10802511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845	Open in IMG/M
3300030626\|Ga0210291_11194499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1101	Open in IMG/M
3300030706\|Ga0310039_10380645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300030740\|Ga0265460_10005323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2378	Open in IMG/M
3300031231\|Ga0170824_115645902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300031446\|Ga0170820_10959773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1588	Open in IMG/M
3300031543\|Ga0318516_10669175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300031545\|Ga0318541_10148607	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300031549\|Ga0318571_10209193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	701	Open in IMG/M
3300031668\|Ga0318542_10455408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	663	Open in IMG/M
3300031668\|Ga0318542_10570190	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300031680\|Ga0318574_10610076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M
3300031708\|Ga0310686_114453266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	558	Open in IMG/M
3300031719\|Ga0306917_10355006	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300031719\|Ga0306917_10604208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300031724\|Ga0318500_10746492	Not Available	500	Open in IMG/M
3300031744\|Ga0306918_10123713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1878	Open in IMG/M
3300031744\|Ga0306918_10970727	Not Available	661	Open in IMG/M
3300031770\|Ga0318521_10607474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	661	Open in IMG/M
3300031781\|Ga0318547_10791603	Not Available	590	Open in IMG/M
3300031782\|Ga0318552_10369700	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300031795\|Ga0318557_10149099	Not Available	1056	Open in IMG/M
3300031798\|Ga0318523_10396492	Not Available	686	Open in IMG/M
3300031910\|Ga0306923_10080038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3660	Open in IMG/M
3300031910\|Ga0306923_11691952	Not Available	654	Open in IMG/M
3300032059\|Ga0318533_11041173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	600	Open in IMG/M
3300032060\|Ga0318505_10606924	Not Available	514	Open in IMG/M
3300032063\|Ga0318504_10463089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300032067\|Ga0318524_10179188	Not Available	1079	Open in IMG/M
3300032076\|Ga0306924_10309801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1811	Open in IMG/M
3300032094\|Ga0318540_10610629	Not Available	525	Open in IMG/M
3300032261\|Ga0306920_101377949	Not Available	1011	Open in IMG/M
3300032261\|Ga0306920_101997700	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300032770\|Ga0335085_10817789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1024	Open in IMG/M
3300032895\|Ga0335074_10055763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5419	Open in IMG/M
3300032896\|Ga0335075_10699559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter americanus	975	Open in IMG/M
3300032896\|Ga0335075_11643586	Not Available	526	Open in IMG/M
3300032898\|Ga0335072_10380646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1526	Open in IMG/M
3300033134\|Ga0335073_10023642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8523	Open in IMG/M
3300033134\|Ga0335073_10988027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	873	Open in IMG/M
3300033158\|Ga0335077_11969761	Not Available	543	Open in IMG/M
3300033289\|Ga0310914_10942756	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300033290\|Ga0318519_10104689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1528	Open in IMG/M
3300033290\|Ga0318519_10423364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	795	Open in IMG/M
3300033290\|Ga0318519_10483765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	744	Open in IMG/M
3300033829\|Ga0334854_037916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	1157	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.44%
Host-Associated	Host-Associated	1.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.41%
Aquatic	Environmental → Aquatic	7.03%
Plants	Host-Associated → Plants	1.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.06%
Freshwater	Environmental → Aquatic → Freshwater	6.25%
Peat	Environmental → Terrestrial → Peat	2.34%
Sediment	Environmental → Aquatic → Sediment	0.78%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.78%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	64.84%
Loam	Environmental → Terrestrial → Soil → Loam	13.28%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.47%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.34%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.47%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.91%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.34%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.56%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.91%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.12%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.56%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.78%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.78%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.78%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.78%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.78%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.78%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001403	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025474	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030626	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033829	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20205J14842_10080702	3300001403	Arctic Peat Soil	VNLLHGFADGPAAAKYPAHDNLDSMHEWPGDPIAGQHNLWPPTVL*
Ga0066388_1080886832	3300005332	Tropical Forest Soil	AFADGPAAAGHPAHDNLAAMHEWAGDPIAAHHDLWPPVVL*
Ga0070709_100472563	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LLGFAGGPAAASHPATDNLDAMHEWPGDPIAAQQNLWPPIRL*
Ga0070709_103535261	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RAFADGPAASRHPARDNLQVTHEWAGDPIAAGHDLWPPVQP*
Ga0070708_1001407621	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LLHGFADGPAASKYRAQDNLDAMQEWSGDPIAAQHSLWPPVVL*
Ga0070699_1017165962	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	ANLLHAFAHGPAAGKYPAHDNLAATREWPGDPIAAQHDLWPPVVL*
Ga0066705_105163632	3300005569	Soil	GPAAARHPAHDNLDATPEWPGDPIAAQHNLWPPVRL*
Ga0070763_101266663	3300005610	Soil	EGPAAAKHPAQDNLGAMHEWPGDPMGAQHNLWPPVVL*
Ga0068864_1011780251	3300005618	Switchgrass Rhizosphere	AAASHPVTDNLDAMHEWPGDPIAAQQNLWPPIRL*
Ga0080026_100066632	3300005952	Permafrost Soil	VLRAFADGPAAASTGRDNLRQLGEWAGDPIAGRHSLWT*
Ga0070717_100986715	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	EGPAAAKYPAHDNLDSMNEWAGDPIAGQHNLWPPVVL*
Ga0070717_105051242	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AFADGPAAAKHPARDNLAAMQEWPGDAIAAQHNLWPPVVL*
Ga0075023_1006363962	3300006041	Watersheds	SSILHAFAGGPAAAKYPAQDNLHSMQEWAGDPIAAQHDLWPPVTL*
Ga0070765_1021077432	3300006176	Soil	FADGPAAARCPARDNLDAMREYAGDPIAAQHDLWPPVIL*
Ga0074053_119932641	3300006575	Soil	VTANLLHGFAHGPAAVEHPADDNLDAMHEWPGDPIAAEYNLWPPLRL*
Ga0079220_102090881	3300006806	Agricultural Soil	LRAFADGPAAARYPARDNLRAMREWPGDPIAAQHNLW*
Ga0099828_113228182	3300009089	Vadose Zone Soil	SDGPAAAKFPARDNLDAMKEWPGDPIAAGHDLWPPVVL*
Ga0105248_116272522	3300009177	Switchgrass Rhizosphere	LGFAGGPAAASHPVTDNLDAMHEWPGDPIAAQQNLWPPIRL*
Ga0126374_116532541	3300009792	Tropical Forest Soil	AFADGPAAAKHPARDNLAATREWPGDPLTAGHNLWPPVVL*
Ga0126373_101110534	3300010048	Tropical Forest Soil	TRNVLHAFADGPAAAKYPAHDNLAAMNEWAGDPIASHHNLWPPIHL*
Ga0126373_132629861	3300010048	Tropical Forest Soil	RAFAEGPAAAKYPAHDNLAATGEWAGDPIAAGHNLWPPIRL*
Ga0126373_133215511	3300010048	Tropical Forest Soil	PAAAKYPAHDNLAAMDEWAGDPIASRHNLWPPTHL*
Ga0127503_104695182	3300010154	Soil	AGGPAAAMHPAHDNLDAMHQWPGDPIAAQYNLWPPIRL*
Ga0134062_106674771	3300010337	Grasslands Soil	RDVTANLLRACADGPAAAKYPAHDNLAAMHEFAGDPIAAHHNLWPPQVR*
Ga0126376_104761171	3300010359	Tropical Forest Soil	GPAAAKYPAHDNLAAMNEWAGDPIASHHNLWPPIHL*
Ga0126376_106235212	3300010359	Tropical Forest Soil	LRAFADGPAAAKHPAHDNLAAMHEWAGDPIAAHHNLWPPVVL*
Ga0126372_123768941	3300010360	Tropical Forest Soil	LGFADGPAGAEHPADDNLDAMHEWPGDPIAAQYNLWPPIRL*
Ga0126372_128561801	3300010360	Tropical Forest Soil	LLHAFADGPAAAKHPARDNLGATQEWPGDPIAAQHNLWPPVVL*
Ga0126378_100988051	3300010361	Tropical Forest Soil	ADGPAAAKYPANDNLDSMQEWPGDPIAAKHSLWPPTVL*
Ga0126378_111280931	3300010361	Tropical Forest Soil	NVLRAFADGPAAHKHPARDNLDAIKPWAGNPIASGHNLW*
Ga0126379_111951642	3300010366	Tropical Forest Soil	TRNVLGAFADGPAAAKHPARDNLAATREWPGDPLTAGHNLWPPVVL*
Ga0126381_1006807713	3300010376	Tropical Forest Soil	LLRAFADGPAAAKYSAHDNLAAMHEWAGDPIAARHNLWPPVVL*
Ga0126381_1031373282	3300010376	Tropical Forest Soil	LRAFADGPAAAKYPAHDNLHAMREWPGDPIAARHDLWPPVVL*
Ga0137389_115310732	3300012096	Vadose Zone Soil	VNLLHGFAEGPAAARYPAHDNLDSMHEWPGDPIAGQHNLWPPTVL*
Ga0137389_117157791	3300012096	Vadose Zone Soil	GPAAARYPAADNLAAMREWPGDPIAARHNLWPPVVR*
Ga0137388_102043532	3300012189	Vadose Zone Soil	GPAAAKYPATDNLAAIHEWPGDPIAASHNLWPPVVR*
Ga0137365_112874192	3300012201	Vadose Zone Soil	PAAAKHPARDNLDAMHEWPGDPIAAQHNLWPPVVR*
Ga0137374_109531982	3300012204	Vadose Zone Soil	QVTANLLHGFAGGPAAAAYPAHDNLGSMHEWPGDPIAARHNLWPPAVL*
Ga0137381_106310861	3300012207	Vadose Zone Soil	LRAFADGPAAAKYPAHDNLAEMHEWPGDPIAARHNLWPPVIL*
Ga0137378_101892903	3300012210	Vadose Zone Soil	PAAAKYPAHDNLDAMHEWPGDPIAARHNLWPPVIL*
Ga0137360_112775011	3300012361	Vadose Zone Soil	AAAAYPAHDNLDSMHEWAGDPIAGQHNLWPPVVL*
Ga0126369_100641754	3300012971	Tropical Forest Soil	VLQAFADGPAAAKHPANDNLDSMQEWPGDPIAAHHDLWPPTVL*
Ga0164304_113651621	3300012986	Soil	RRTTANLLHGFADGPAAAGHPATDNLDAMHEWPGDPIAALQNLWPPIRL*
Ga0164305_117985542	3300012989	Soil	LGFAGGPAAASHPAHDNLDAMHEWRGDPIAAQYNLWPPIRL*
Ga0181516_103175002	3300014655	Bog	VLRAFADGPAAANYPAHDNLDSMDEWAGDPLASGHNLWPPIVL*
Ga0182038_101512213	3300016445	Soil	ADGPAAHKYPAHDNLAAMNEWPGDPIAAQHNLWPPVHL
Ga0187807_10352281	3300017926	Freshwater Sediment	PAAAKYPANDNLDAMQEWPGDPVAGQHNLWPPVVL
Ga0187806_11069051	3300017928	Freshwater Sediment	HAFADGPAAAKHPAHDNLAAMQEWAGDPIAAQHNLWPPIHL
Ga0187814_101546612	3300017932	Freshwater Sediment	AFADGPAAAKYPARDNLDAMDEWPGDPIAAQHNLWPPVHL
Ga0187779_107387721	3300017959	Tropical Peatland	DGPAAARFPAHDNLDAMHEWPGDPIAAGHNLWPPVVL
Ga0187783_112610672	3300017970	Tropical Peatland	DGQAADKHPAQDNLDAMQEWAGDPIAAQHDLWPPVVL
Ga0187780_104670092	3300017973	Tropical Peatland	AAAAKYPAHDNLDAMQEWSGDPIAAQHDLWPPVTL
Ga0187767_101274042	3300017999	Tropical Peatland	ADGPAAASHPAHDNLDSMDEWPGDPIAAQHNLWPPVVL
Ga0187805_102948522	3300018007	Freshwater Sediment	GPAAAKYPANDNLDQMQEWAGDPIAGGHNLWPPTVL
Ga0187805_104946022	3300018007	Freshwater Sediment	LHAFADGPAAARHPAHDNLAAMHEWAGDPIAAQHNLWPPVHL
Ga0187890_104876101	3300018044	Peatland	NVLRAFADGPAAAKYPAQDNLDAMSEWPGDPIAAQHDLWPPVIL
Ga0187765_111381802	3300018060	Tropical Peatland	RAFADGPAAAKYPARDNLDAMQEWAGDPIAAQHDLWPPVVL
Ga0066669_106513701	3300018482	Grasslands Soil	LLHGFARGPAAARHPAHDNLAAMHEFAGDPIAAHHNLWPPQVR
Ga0179592_101033392	3300020199	Vadose Zone Soil	LLRGFADGPAAAKHPARDNLNAVQEWPGDPIAAQHNLWPPVRR
Ga0210397_102334313	3300021403	Soil	AGGPAAAKHPAHDNLDAMHEWPGDPMAAHHDLWPPVRL
Ga0210397_114795802	3300021403	Soil	SNVLHAFADGPAAAKYPAHDNLAQMQEWAGDPIAAGHNLWPPVVL
Ga0210389_115170321	3300021404	Soil	PAAAKYPAHDNLDSMHEWAGDPIAGQHDLWPPVHL
Ga0210387_114623721	3300021405	Soil	TTNLLHGFADGPAAAKYPAHDNLGSMHEWAGDPIAGQHNLWPPVVL
Ga0210383_110447012	3300021407	Soil	PAAAKYPAHDNLDSMHEWPGDPIAGQHNLWPPVVL
Ga0210394_106651101	3300021420	Soil	LLQGFADGPAAAKHPAHDNLHAMNEWPGDPIAAQNNLWPPVVL
Ga0210391_110997012	3300021433	Soil	PAAGKHPAQDNLDAMQEWPGDPIAAQHDLWPPVVL
Ga0210390_106715471	3300021474	Soil	HGFAGGPAAARHPAHDNLDAMHEWPGDPMAAHHDLWPPVRL
Ga0210398_106559612	3300021477	Soil	LLRGFADGPAADKHPAQDNLDAMQEWSGDPIAAQHDLWPPVVL
Ga0210402_102082361	3300021478	Soil	FADGPAAAKHPAHDNLAATKEWAGDPVAAQHNLWPPVVL
Ga0126371_117269602	3300021560	Tropical Forest Soil	LQAFAQGPAAAKYPAKDNLVAMQEWPGDPIAAHHNLWPPTVL
Ga0224564_10202701	3300024271	Soil	VKRVSANLLRGFADGPAAGKHPAQDNLDAMQEWPGDPIAAQHDLWPPVVL
Ga0208479_11038752	3300025474	Arctic Peat Soil	LLHGFAGGPAAASHPAQDNLDSMHEWPGDPIAARRDLWPPVVL
Ga0208220_10229511	3300025627	Arctic Peat Soil	LLRGFAEGPAAAKFPAHDNLDSMHEWPGDPIAAQHNLWPPVVL
Ga0207646_106352161	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LAAAKHPAHDNLAAMHEWAGDPIAAHHNLWPPVVL
Ga0207646_109440051	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ARGPAAAKYPATDNLAAMHEWPGDPIAASHNLWPPVVR
Ga0207664_100154705	3300025929	Agricultural Soil	PAAARYPAHDNLAAMHEWPGDPIAAQHDLWPPVVR
Ga0207664_100899794	3300025929	Agricultural Soil	ADGPAAARYPARDNLAAMQEWPGDPIAAQHSLWPPVVR
Ga0209115_11345981	3300027567	Forest Soil	FADGPAAAKHPARDNLDAMHEWPGDPISAGHNLWPPITL
Ga0209465_106016882	3300027874	Tropical Forest Soil	LHGFADGPAAAKHPARDNLAATHEWPGDPIAAQHNLWPSVVR
Ga0308309_104679951	3300028906	Soil	FADGPAAAKYPAHDNLDSMHEWPGDPIAGQHNLWPPVVL
Ga0308309_114932901	3300028906	Soil	AFADGPAAARCPARDNLDAMREYAGDPIAAQHDLWPPVIL
Ga0311339_104130951	3300029999	Palsa	AFADGPAAASHPAQDNLDAMDEYAGDPIAAQHNLW
Ga0311357_108025111	3300030524	Palsa	DGPAAAKYPAHDNLEEMREWPGDPIAAQHDLWPPVLL
Ga0210291_111944992	3300030626	Soil	VLKAFADGPAAHQHPAHDNVEAMHAWAGDPITTGHTLW
Ga0310039_103806451	3300030706	Peatlands Soil	LRAFADGPAAARYPAQDNLDAMDEWPGDPIAAQHDLWPPVVL
Ga0265460_100053233	3300030740	Soil	AFADGPAAHKHPAHDNVEALQAWPGDPISAGHNLWPPVIL
Ga0170824_1156459021	3300031231	Forest Soil	QVTTNLLHGFADGPAAAKYPAHDNLGSMHEWAGDPIAGQHNLWPPVVL
Ga0170820_109597731	3300031446	Forest Soil	PAAIRFGATDNLAAQHEWPGDPVAAHHNLWPPVVR
Ga0318516_106691751	3300031543	Soil	DGPAAAKHPAHDNLAAMHEWAGDPIAANHNLWPPVVL
Ga0318541_101486072	3300031545	Soil	RAFADGPAAAKYPAHDNLDALREWAGDPIAAQHDLWPPVTL
Ga0318571_102091931	3300031549	Soil	PAAAKHPAHDNLAAMHEWAGDPIAANHNLWPPVVL
Ga0318542_104554082	3300031668	Soil	LCWAAAKHPAHDNLDAMQEWAGDPIAAQHNLWPPVVL
Ga0318542_105701902	3300031668	Soil	FADGPAAAKHPAHDNLDAMDEWAGDPIAAQHNLWPPVHL
Ga0318574_106100762	3300031680	Soil	FADGPAAARHPAHDNLPAMQEWAGDPIAAQHNLWPPMVL
Ga0310686_1144532661	3300031708	Soil	HVTLNILRGFADGPAAAKYPAHDNLDSMHEWAGDPIAGQHSLWPPVTL
Ga0306917_103550061	3300031719	Soil	LRAFADGPAAAKYPARDNLEAMQEWAGDPIAAQHDLWPPVTL
Ga0306917_106042081	3300031719	Soil	GPAAAKHPAHDNLAAMHEWAGDPIAANHNLWPPVVL
Ga0318500_107464922	3300031724	Soil	LLRGFADGPAAAKHPARDNLDAMQEWAGDPIAAQHNLWPPVVL
Ga0306918_101237131	3300031744	Soil	LRAFADGPVAAKHPAHDNLAAMQEWAGDPIAAHHNLWPPMVL
Ga0306918_109707271	3300031744	Soil	ATTANLLRGFADGPAAAKHPAHDNLDAMQEWPGDPIAAQHNLWPPVLL
Ga0318521_106074741	3300031770	Soil	RAFADGPAAHKYPAHDNLAAMNEWPGDPIAAQHNLWPPVHL
Ga0318547_107916032	3300031781	Soil	TANLLRGFADGPAAAKHPAHDNLDAMQEWAGDPIAAQHNLWPPVVL
Ga0318552_103697002	3300031782	Soil	GPAAAKYPARDNLGALREWAGDPIAAQHDLWPPVTL
Ga0318557_101490992	3300031795	Soil	NLLRAYAGGPAAAKHPAHDNLAAMQAWPGDPIAGHHNLWPPIVL
Ga0318523_103964921	3300031798	Soil	GFADGPAAAKHPAHDNLDAMHEWPGDPIAAQHNLWPPVLL
Ga0306923_100800381	3300031910	Soil	DGPAAAKHPAHDNLAAMHEWPGDPIAAQHNLWPPVVR
Ga0306923_116919522	3300031910	Soil	KATTANLLRGFADGPAAAKHPAHDNLDAMQEWPGDPIAAQHNLWPPVVL
Ga0318533_110411732	3300032059	Soil	PAAHKYPAHDNLAAMNEWPGDPIAAQHNLWPPVHL
Ga0318505_106069242	3300032060	Soil	AATANLLRGFADGPAAAKHPAHDNLDAMQEWAGDPIAAQHNLWPPVVL
Ga0318504_104630891	3300032063	Soil	LRAYADGPAAAKHPAHDNLAAMHEWAGDPIAANHNLWPPVVL
Ga0318524_101791882	3300032067	Soil	ACMAAKHPAHDNLAAMQAWPGDPIAGHHNLWPPIVL
Ga0306924_103098013	3300032076	Soil	GPVAAKHPAHDNLAAMQEWAGDPIAAHHNLWPPMVL
Ga0318540_106106292	3300032094	Soil	STANLLRGFADGPAAAKHPAHDNLDAMQEWAGDPIAAQHNLWPPVVL
Ga0306920_1013779491	3300032261	Soil	YADGPAAAKHPAHDNLAAMHEWAGDPIAANHNLWPPVVL
Ga0306920_1019977002	3300032261	Soil	LRAFADGPAAAKYPARDNLDAMQEWAGDPIAAQHDLWPPVTR
Ga0335085_108177892	3300032770	Soil	NVLRAFAEGPAAAKHSAHDNLAAMHEWPGDPIAAKHDLWPPVVL
Ga0335074_100557631	3300032895	Soil	AFADGPAAAKYPARDNLGSMHEWPGDPIAAQHNLWPPVVL
Ga0335075_106995592	3300032896	Soil	HAFADGPAADKYPAHDNLDAMHEWAGDPMAAQHNLWPPIVL
Ga0335075_116435862	3300032896	Soil	RGFADGPAADKHPAQDNLDAMQEWSGDPIAAQHDLWPPVVL
Ga0335072_103806461	3300032898	Soil	LHAFADGPAAARYPARDNLASMHEWPGDPIAGQHNLWPPVVL
Ga0335073_1002364210	3300033134	Soil	PAADKHPAQDNLDAMQEWSGDPIAAQHDLWPPVVL
Ga0335073_109880272	3300033134	Soil	FADGPAAARYPARDNLEAMHEWPGDPLAAGHNLWPPVQL
Ga0335077_119697612	3300033158	Soil	FADGPAAARYPAHDNLAAMHEWPGDPLAAGHNLWPPVVL
Ga0310914_109427561	3300033289	Soil	DGPAAAKYPAHDNLDAMQEWAGDPIAAQHNLWPPVTL
Ga0318519_101046891	3300033290	Soil	AFADGPAAAKHPAHDNLAAMHEWPGDPIAAQHNLWPPVVR
Ga0318519_104233641	3300033290	Soil	YADGPAAAKHRAHDNLAAMHEWAGDPIAANHNLWPPVVL
Ga0318519_104837651	3300033290	Soil	ANLLRGFADGPAAAKHPAHDNLDAMQEWAGDPIAAQHNLWPPVVL
Ga0334854_037916_26_142	3300033829	Soil	VLRAFADGPAAASYPAHDNLDAMDEWPGDPIAAQHDLW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F064892

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences