Metagenome Family F064969

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F064969
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	97 residues
Representative Sequence	MDVPVQYFQSVIAIELAVSGALLWQMRFFESDSARREGEPLPDARLRLGLALVLGATMFGSLWAMADEGPKWAAVAVTIGLALSLVPILLRVLPPL
Number of Associated Samples	102
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.44 %
% of genes near scaffold ends (potentially truncated)	96.88 %
% of genes from short scaffolds (< 2000 bps)	93.75 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.250 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (32.031 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.812 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.10% β-sheet: 0.00% Coil/Unstructured: 37.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF06803	DUF1232	17.19
PF00571	CBS	2.34
PF02633	Creatininase	2.34
PF01694	Rhomboid	2.34
PF00196	GerE	1.56
PF01887	SAM_HAT_N	1.56
PF08241	Methyltransf_11	1.56
PF07040	DUF1326	1.56
PF13474	SnoaL_3	0.78
PF03729	DUF308	0.78
PF13302	Acetyltransf_3	0.78
PF01435	Peptidase_M48	0.78
PF09335	SNARE_assoc	0.78
PF03372	Exo_endo_phos	0.78
PF06897	DUF1269	0.78
PF13460	NAD_binding_10	0.78
PF01939	NucS	0.78
PF08125	Mannitol_dh_C	0.78
PF03575	Peptidase_S51	0.78
PF13424	TPR_12	0.78
PF12681	Glyoxalase_2	0.78
PF13683	rve_3	0.78
PF13649	Methyltransf_25	0.78
PF01872	RibD_C	0.78
PF05231	MASE1	0.78
PF07690	MFS_1	0.78
PF05392	COX7B	0.78
PF06772	LtrA	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	17.19
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	2.34
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	2.34
COG1912	Stereoselective (R,S)-S-adenosylmethionine hydrolase (adenosine-forming)	Defense mechanisms [V]	1.56
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	1.56
COG0246	Mannitol-1-phosphate/altronate dehydrogenases	Carbohydrate transport and metabolism [G]	0.78
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.78
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.78
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.78
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.78
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.78
COG1637	Endonuclease NucS, RecB family	Replication, recombination and repair [L]	0.78
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.78
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.78
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	0.78
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.78
COG4292	Low temperature requirement protein LtrA (function unknown)	Function unknown [S]	0.78
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.19 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.56 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.28 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.78 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.78 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.78 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.78 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.56 %
uncultured Gemmatimonadota bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	0.78 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.78 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	0.78 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.78 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.78 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.56 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.78 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.78 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.78 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	0.78 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.78 %
uncultured Gemmatimonadota bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	0.78 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.56 %
unclassified Rubrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae	0.78 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.78 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	0.78 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.78 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.78 %
uncultured Gemmatimonadota bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	0.78 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.56 %
Cellulomonas fimi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → Cellulomonas fimi	0.78 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.78 %
Rubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	0.78 %
Microbispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	0.78 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.78 %
uncultured Gemmatimonadota bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	0.78 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402H5444	Not Available	515	Open in IMG/M
2189573001\|GZR05M102HMPBU	Not Available	510	Open in IMG/M
2228664022\|INPgaii200_c1028758	Not Available	580	Open in IMG/M
3300000550\|F24TB_10202040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300000891\|JGI10214J12806_12669616	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300000956\|JGI10216J12902_102766655	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300000956\|JGI10216J12902_117916953	Not Available	762	Open in IMG/M
3300002075\|JGI24738J21930_10070634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	723	Open in IMG/M
3300004114\|Ga0062593_102263394	Not Available	610	Open in IMG/M
3300004157\|Ga0062590_101368784	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300004157\|Ga0062590_102386813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300004463\|Ga0063356_104833216	Not Available	579	Open in IMG/M
3300004479\|Ga0062595_102079942	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300004643\|Ga0062591_100374932	Not Available	1163	Open in IMG/M
3300005093\|Ga0062594_100161662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1489	Open in IMG/M
3300005093\|Ga0062594_100371926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1136	Open in IMG/M
3300005093\|Ga0062594_101408204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	708	Open in IMG/M
3300005093\|Ga0062594_103361085	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300005330\|Ga0070690_101641621	Not Available	522	Open in IMG/M
3300005332\|Ga0066388_106034011	Not Available	612	Open in IMG/M
3300005334\|Ga0068869_100710283	Not Available	858	Open in IMG/M
3300005338\|Ga0068868_101344027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	665	Open in IMG/M
3300005340\|Ga0070689_100303018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1330	Open in IMG/M
3300005364\|Ga0070673_100211549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1675	Open in IMG/M
3300005406\|Ga0070703_10069189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1175	Open in IMG/M
3300005434\|Ga0070709_11293645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300005439\|Ga0070711_100118865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1951	Open in IMG/M
3300005440\|Ga0070705_100119742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1698	Open in IMG/M
3300005440\|Ga0070705_101180937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300005444\|Ga0070694_100691717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	828	Open in IMG/M
3300005445\|Ga0070708_102021356	Not Available	533	Open in IMG/M
3300005456\|Ga0070678_100088724	All Organisms → cellular organisms → Bacteria	2365	Open in IMG/M
3300005457\|Ga0070662_101439337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas → Cellulomonas fimi	594	Open in IMG/M
3300005468\|Ga0070707_101359581	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300005471\|Ga0070698_101244754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	694	Open in IMG/M
3300005530\|Ga0070679_100657415	Not Available	991	Open in IMG/M
3300005539\|Ga0068853_100105038	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300005545\|Ga0070695_100413155	Not Available	1026	Open in IMG/M
3300005545\|Ga0070695_101506460	Not Available	560	Open in IMG/M
3300005546\|Ga0070696_100357383	Not Available	1133	Open in IMG/M
3300005546\|Ga0070696_100395649	Not Available	1080	Open in IMG/M
3300005549\|Ga0070704_101922705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300005615\|Ga0070702_100183630	Not Available	1371	Open in IMG/M
3300005618\|Ga0068864_101576670	Not Available	660	Open in IMG/M
3300005719\|Ga0068861_100078203	All Organisms → cellular organisms → Bacteria	2583	Open in IMG/M
3300005764\|Ga0066903_103496288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	847	Open in IMG/M
3300005764\|Ga0066903_107789213	Not Available	551	Open in IMG/M
3300005985\|Ga0081539_10050062	All Organisms → cellular organisms → Bacteria	2366	Open in IMG/M
3300006034\|Ga0066656_11071104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	518	Open in IMG/M
3300006058\|Ga0075432_10184148	Not Available	819	Open in IMG/M
3300006058\|Ga0075432_10370224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	612	Open in IMG/M
3300006175\|Ga0070712_101077806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	697	Open in IMG/M
3300006804\|Ga0079221_10998383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	628	Open in IMG/M
3300006845\|Ga0075421_100409542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1627	Open in IMG/M
3300006847\|Ga0075431_100406919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1361	Open in IMG/M
3300006847\|Ga0075431_101685963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300006903\|Ga0075426_10030390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3865	Open in IMG/M
3300009092\|Ga0105250_10201818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300009094\|Ga0111539_12560576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300009098\|Ga0105245_11819546	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300009100\|Ga0075418_10473600	Not Available	1343	Open in IMG/M
3300009101\|Ga0105247_10072127	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2161	Open in IMG/M
3300009101\|Ga0105247_10608914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	811	Open in IMG/M
3300009101\|Ga0105247_11602548	Not Available	535	Open in IMG/M
3300009147\|Ga0114129_12855884	All Organisms → cellular organisms → Bacteria → Terrabacteria group	573	Open in IMG/M
3300009147\|Ga0114129_12957057	Not Available	560	Open in IMG/M
3300009147\|Ga0114129_12985696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	557	Open in IMG/M
3300009162\|Ga0075423_13118266	Not Available	508	Open in IMG/M
3300009176\|Ga0105242_10977114	Not Available	853	Open in IMG/M
3300009553\|Ga0105249_11932113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Microbispora	663	Open in IMG/M
3300009553\|Ga0105249_13191237	Not Available	527	Open in IMG/M
3300010046\|Ga0126384_11799000	Not Available	582	Open in IMG/M
3300010362\|Ga0126377_13203489	Not Available	529	Open in IMG/M
3300010375\|Ga0105239_11972734	Not Available	677	Open in IMG/M
3300010396\|Ga0134126_10446043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1498	Open in IMG/M
3300012885\|Ga0157287_1096303	Not Available	542	Open in IMG/M
3300012897\|Ga0157285_10254707	Not Available	578	Open in IMG/M
3300012899\|Ga0157299_10023951	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1185	Open in IMG/M
3300012913\|Ga0157298_10251107	Not Available	599	Open in IMG/M
3300012930\|Ga0137407_10120642	All Organisms → cellular organisms → Bacteria	2277	Open in IMG/M
3300012937\|Ga0162653_100065281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → unclassified Rubrobacteraceae → Rubrobacteraceae bacterium	581	Open in IMG/M
3300012938\|Ga0162651_100086569	Not Available	527	Open in IMG/M
3300012984\|Ga0164309_10191802	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300012984\|Ga0164309_10784794	Not Available	765	Open in IMG/M
3300013296\|Ga0157374_11008423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	852	Open in IMG/M
3300013297\|Ga0157378_10265042	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300013297\|Ga0157378_12131262	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300013306\|Ga0163162_12169902	Not Available	637	Open in IMG/M
3300013307\|Ga0157372_12575470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	584	Open in IMG/M
3300014326\|Ga0157380_10597348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1091	Open in IMG/M
3300014968\|Ga0157379_11019721	Not Available	790	Open in IMG/M
3300014968\|Ga0157379_12220534	Not Available	545	Open in IMG/M
3300014969\|Ga0157376_10413071	Not Available	1308	Open in IMG/M
3300014969\|Ga0157376_12798210	Not Available	528	Open in IMG/M
3300015200\|Ga0173480_10057917	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300015200\|Ga0173480_10463843	Not Available	750	Open in IMG/M
3300018074\|Ga0184640_10176966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	959	Open in IMG/M
3300018465\|Ga0190269_11881961	Not Available	515	Open in IMG/M
3300019361\|Ga0173482_10083556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1123	Open in IMG/M
3300022756\|Ga0222622_10677188	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → environmental samples → uncultured Gemmatimonadota bacterium	748	Open in IMG/M
3300022915\|Ga0247790_10030733	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1187	Open in IMG/M
3300023168\|Ga0247748_1068094	Not Available	557	Open in IMG/M
3300025927\|Ga0207687_10107792	Not Available	2062	Open in IMG/M
3300025929\|Ga0207664_10268893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1493	Open in IMG/M
3300025934\|Ga0207686_11131381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300025938\|Ga0207704_10222556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1397	Open in IMG/M
3300025938\|Ga0207704_11149789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300025960\|Ga0207651_11106853	Not Available	710	Open in IMG/M
3300026023\|Ga0207677_11434453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	636	Open in IMG/M
3300027465\|Ga0207626_101341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300027873\|Ga0209814_10208119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300027873\|Ga0209814_10214939	Not Available	832	Open in IMG/M
3300027907\|Ga0207428_11277260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	509	Open in IMG/M
3300028381\|Ga0268264_11635992	Not Available	654	Open in IMG/M
3300028587\|Ga0247828_11027761	Not Available	540	Open in IMG/M
3300028784\|Ga0307282_10639882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516	Open in IMG/M
3300028807\|Ga0307305_10523068	Not Available	531	Open in IMG/M
3300028824\|Ga0307310_10070662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1499	Open in IMG/M
3300028878\|Ga0307278_10413315	Not Available	592	Open in IMG/M
3300028889\|Ga0247827_10573287	Not Available	718	Open in IMG/M
3300030336\|Ga0247826_10422178	Not Available	990	Open in IMG/M
3300030511\|Ga0268241_10113366	Not Available	638	Open in IMG/M
3300031740\|Ga0307468_100921783	Not Available	760	Open in IMG/M
3300032180\|Ga0307471_100934857	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1034	Open in IMG/M
3300032180\|Ga0307471_102489211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	655	Open in IMG/M
3300032205\|Ga0307472_100555919	Not Available	1003	Open in IMG/M
3300032205\|Ga0307472_101068618	Not Available	761	Open in IMG/M
3300032205\|Ga0307472_102066865	Not Available	572	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	59.38%
Host-Associated	Host-Associated	40.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.81%
Plants	Host-Associated → Plants	40.62%
Aquatic	Environmental → Aquatic	1.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.94%
Sediment	Environmental → Aquatic → Sediment	1.56%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	27.34%
Loam	Environmental → Terrestrial → Soil → Loam	18.75%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.16%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.56%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	27.34%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.56%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.56%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.34%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.56%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.56%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.78%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.78%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.78%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012885	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027465	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK03-A (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030511	Bulk soil microbial communities from Mexico - Amatitan (Am) metaG (v2)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_06242190	2070309009	Soil	VDVPVQYFQSVIAIELAVTGALLWQIRFVDSRRTDHPEGKPLPDPRLRLGLALVLGATLFGSLWAMADEGPRWAALAVTVGLAVSLTPILLRVLPP
FD2_05865110	2189573001	Grass Soil	MDVPVQYFQSVIAIELAVSGALLWQMRFFESSTTRRQGPPLPDARLRVALALVLGATMFGSLWAMADEGPKWAAVAVTIGLAVSLVPILLRVLPPLAKDAAT
INPgaii200_10287581	2228664022	Soil	MDVPVQYFQSVIAIELAVSGALLWQIRFFESNAERRKGEPLPDARLRVGLALVLGATVFGSLWAMADEGPKWAALAVTIGLAISLFPILLRVLPPLGRDAATDTRDP
F24TB_102020402	3300000550	Soil	MVGRASYRRPRQDTEARLTVHLQTWRVGATVDVPVQYFQSVIAIELAVAGALLWQIRFFESSATRREGEPLPDARLRVGLALVLGATVFGSLWA
JGI10214J12806_126696162	3300000891	Soil	VTGAILAAARGVPVQFFQSAIAIELAIAGALLWQIRFFEPTDKTPRTNEHPHDSRVRLGFAIVLGATLFGSLWAMADEGPKWAALAVTVGLAVSAIP
JGI10216J12902_1027666553	3300000956	Soil	VDVPVQYFQSVITIELAVAGALLWQMRYFEPGDATRRDKADRPDSRLRLGLAIVLGATVFGSLWAIADEGPKWAAVAVTIGLAVSLIRSC*
JGI10216J12902_1179169532	3300000956	Soil	VDVPVQYFQSVIAIELAVSGALLWQIRYFEAPHARQRESDDLPDSRLRLGVALVLGGTVFGSLWAIANDGPEWAAVAVTIGVAVSIVPILLRVLPPLARD
JGI24738J21930_100706342	3300002075	Corn Rhizosphere	VDVPVQFFQSVIAIELAVTGALLWQIRFFESGDRARRESEHLPDSRLRLGLALVLGSTLFVSLWAIADEGPKWAALAVTVGLAISLIPILLRVLPPLAKDASTDKR
Ga0062593_1022633942	3300004114	Soil	VDVPVQFFQSVIAIEVAVTGALLWQIRFFESRDARRREKEDLPDPRLQLGLALVLAATVFGSLWAIADEGPKWAALAVTIGLAVSLIPIILRVLPPLAKDAATNER
Ga0062590_1013687841	3300004157	Soil	MLSQHSGRRRDGRHPGRSSWSTRSVFQSAIAIELAIAGALLWQIRFFEPTDKTPRTNEHPHDSRVRLGFAIVLGATLFGSLWAMADEGPKWAALAVTVGLAVSAIPIMLRVLPP
Ga0062590_1023868131	3300004157	Soil	LRSSILVGVEVPVQYFQSVIAVELAVAGALLWEIHFFDSRGTRPEGEHLPDSRLRVGLALVLGATVFGSLWAMADEGPKWAALAVTVGLAVSLTPILLRVLPPWRRTLRPTNA
Ga0063356_1048332161	3300004463	Arabidopsis Thaliana Rhizosphere	MDVPVQYFQSVIAIELAVTGALLWQIRYFEPRDTPRRGEERLPDSRLRLGLALVLGATMFGSLWAIADEGPKWAAVAVTVGLAVSLTPILLRVLPPL
Ga0062595_1020799421	3300004479	Soil	VDVPVQFFQSVIAIELAVTGALLWQMRFFESKDARQRENERLPDSRLRLGLALVLGSTLFGSLWAIADEGPKWAALAVTVGLAVSLIPILLRVLPPL
Ga0062591_1003749322	3300004643	Soil	MDIPVQYFQSVIGIELAVSGALLWQIRYFESNTARREGEPLPDARLRVGLAVVMGATVYGSLWAIADEGPKWAALLVTIG
Ga0062594_1001616623	3300005093	Soil	VDVPVQYFQSVIAIELAVAGALLWQIRYFESPEKDQRDSARHPDSRLRLGLALVLGMTMFGSLWAMADEGPKWAAVAVTIGLAVSLIPILL
Ga0062594_1003719261	3300005093	Soil	VTGAILAAARGVPVQFFQSAIAIELAIAGALLWQIRFFEPTDKTPRTNEHPHDSRVRLGFAIVLGATLFGSLWAMADEGPKWAALAVTVGLAVSAIPVM
Ga0062594_1014082042	3300005093	Soil	VDVPVQYFQSVIAIELAVTGALLWQIRYFESGDANRREGERVPDSRLRLGLALVLGLTMFGSLWAIADEGPKWAAVAVTVGLAVSLIPILLRVLPPLAR
Ga0062594_1033610851	3300005093	Soil	VDVPVQYFQSVIAIEVAVTGALLWQIRYFESSGPRREDLPDSRLRLGLALVLGTTVFGSLWAIANDGPEWAAVAVTTGLAVSIVPILLRVLPPLA
Ga0070690_1016416212	3300005330	Switchgrass Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESDSARREGEPLPDARLRLGLALVLGATMFGSLWAMADEGPKWAAVAVTIGLALSLVPILLRVLPPLANDAATKERD
Ga0066388_1060340112	3300005332	Tropical Forest Soil	VDVPVQFFQSVIAMELAVTGALLWEMRFFESKDSKQREREGLPDSRLRLGLALVLGVTLFGSLWAIADEGPKWAALVVTVGLAVSLVPILLR
Ga0068869_1007102832	3300005334	Miscanthus Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESNTARREGEPLPDARLRVGLALVLGATVFGSLWAMADEGPKWAALVVTIGLAVSLVP
Ga0068868_1013440271	3300005338	Miscanthus Rhizosphere	VRLERWRVGAPVDVPVQFFQSVIAIELAVSGALLWQMRFFESSTARREGKPLPDARLRVALALVLGATVFGSLWAIADEGPKWAALAVTIGLAVSLVPILLRVLPPLA
Ga0070689_1003030181	3300005340	Switchgrass Rhizosphere	MTESWAAMDVPVQYFQSVIAIELAVSGALLWQMRFFESDSARREGEPPPDARLRLGLALVLGATVFGSLWAMADEGPKWAAVAVTIGLALSLVPILLRVLPPLANDAATKER
Ga0070673_1002115491	3300005364	Switchgrass Rhizosphere	MTESWAAMDVPVQYFQSVIAIELAVSGALLWQMRFFESDSARREGEPPPDARLRLGLALVLGATVFGSLWAMADEGPKWAAVA
Ga0070703_100691893	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESNAARREGEPLPDARLRVGLALVLGATVFGSLWAMADEGPKWAAVAVTIGLAVSLVPIVLRVLPPLAKDATTNERDPD
Ga0070709_112936451	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LTVRLQIWRVGAPMDVPVQYFQSVIAIELAVSGALLWQMRFFESRTARREGEPLPDARLRVALALVLGATLFGSLWAMADEGPKWAA
Ga0070711_1001188651	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESDSARREGEPLPDARLRLGLALVLGATMFGSLWAMADEGPKWAAVAVTIGLALSLVPILLRVLPPLANDAATKER
Ga0070705_1001197421	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESRTARREGEPLPDARLRVALALVLGATLFGSLWAMADEGPKWAAQVVTIGLAVSLVPILLRVL
Ga0070705_1011809371	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESNAARREGEPLPDARLRVGLALVLGATVFGSLWAMADEGPKWAAVAVTI
Ga0070694_1006917171	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LTVRLQIWRVGAPMDVPVQYFQSVIAIELAVSGALLWQMRFFESRTARREGEPLPDARLRVALALVLGATLFGSLWAMADEGPKWAAQVVTIGLA
Ga0070708_1020213561	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VDVPVQYFQSVIAIELAVSGALLWQIRFFESSATRREGEPLPDARLRVGLALVLGATVFGSLWAMADEGPKWAAVAVTIGLAVSLVPILLRVLP
Ga0070678_1000887241	3300005456	Miscanthus Rhizosphere	VDVPVQYFQSVIAIELAVAGALLWQIRFFESKDTTRRDGEQLPDPRLRLCLALVLGATLFGSLWAMADEGPKWAALAVTIGLAVSLTPILLRVLPPL
Ga0070662_1014393371	3300005457	Corn Rhizosphere	LTVRLQIWRVGAPMDVPVQYFQSVIAIELAVTGALLWQMRFFESRTARREGEPLPDARLRVALALVLGATLFGSLWAMADEGPKWAAQVVTIGLAVSLVPILLRVLPPLVKDATTNERDP
Ga0070707_1013595812	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LTALRRTWRVGASVDVPVQYFQSIIAIELAVTGALLWQIRFFESNATRREGKPLPDARLRVALALVLGATVFGSLWAMADEGPKWAALVVTIGLAVSLVPILLRVLPP
Ga0070698_1012447542	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MTESWAAMDVPVQYFQSVIAIELAVSGALLWQMRFFESDSARREGEPPPDARLRLGLALVLGATVFGSLWAMADEGPQWAAVAVTIGLALSVVP
Ga0070679_1006574152	3300005530	Corn Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESDSARREGEPLPDARLRLGLALVLGATMFGSLWAMADEGPKWAAVAVTIGLALSLVPILLRVLPPLA
Ga0068853_1001050381	3300005539	Corn Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESDSARREGEPLPDARLRLGLALVLGATMFGSLWAMADEGPKWAAVAVTIGLALSLVPILLRV
Ga0070695_1004131552	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESDSARREGEPPPDARLRLGLALVLGATVFGSLWAMADEGPKWAAVAVTIGLALSLVPILLRVLPPLA
Ga0070695_1015064601	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VDVPVQYFQSVIAIELAVAGALLWQIRFFESKDTTRRDGEQLPDPRLRLCLALVLGATLFGSLWAMADEGPKWAALLVTIGLAVSLVPIILRVLPPLAKDATTDE
Ga0070696_1003573831	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VGAPLVDVPVQYFQSIIAIELAVAGALLWQMRYFESSAARREGEPLPDARLRVALAVVLGVTLFGSLWAMADEGPKWAALLVTIGLAVSLVPILLRVLPPLARDAT
Ga0070696_1003956493	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VDVPVQYFQSVIAIELAVTGALLWQINFFDSKRTTPREGKLPDARLRILMALILGATVFGSLWAMVDAERSRWPAIAVTIGLAISIIPILLRVLPPLARD
Ga0070704_1019227051	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAPRQDTEARLTVRLQIWRVGAPMDVPVQYFQSVIAIELAVTGALLWQMRFFESRKARREGEPLPDARLRVALALVLGATLFGSLWAMADEGPKW
Ga0070702_1001836303	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VRLERWRVGAPVDVPVQFFQSVIAIELAVSGALLWQMRFFESSTARREGKPLPDARLRVALALVLGATVFGSLWAMADEGPKWAAQVVTIGLAVSLVPILLRVLPPL
Ga0068864_1015766702	3300005618	Switchgrass Rhizosphere	VDVPVQYFQSVIAIELAVAGALLWQIRFFESKDTTRRDGEQLPDPRLRLCLALVLGATLFGSLWAMADEGPKWAALAVTVGLAVS
Ga0068861_1000782031	3300005719	Switchgrass Rhizosphere	VDVPVQYFQSVIAIELAVAGALLWQIRFFESKDTTRRDGEQLPDPRLRLCLALVLGATLFGSLWAMADEGPKWAALAVTVGLAVSLTPILLRVLPPLA
Ga0066903_1034962882	3300005764	Tropical Forest Soil	VPHIAATDVPVQYFQSVITIELAVAGALLWQIHYFDSKGRADRDAASLPDARLRLGLGLVLGMTMFGSLWAIADEGPRWAAGAVAVGLAVSVLPILLRVLPPLVKDARTNER
Ga0066903_1077892131	3300005764	Tropical Forest Soil	VAGALLWQMHYFDSGDAARRSSERRPDARLRLGLAIVLGATVFGSLWAMADEGPKWAAVAVTIGLAVSLTPILLGVLPSLARTPRRTSVIPTTP*
Ga0081539_100500622	3300005985	Tabebuia Heterophylla Rhizosphere	MDVPVQFFQSVIAIELAVTGALLWQIRFFESKDVPRRQNERLPDSRLRLGLALVLGATVFGSLWAIADEGPKWAALAVTVGLAVSLIPTLFLPRAEADRVPSPA*
Ga0066656_110711042	3300006034	Soil	MDVPVQYFQSVIAIELAVSGALLWQMRFFESRTARRAGESLPDARLRVGLALVLGATLFGSLWAMADEGPKWAALAVTIGLAVSL
Ga0075432_101841482	3300006058	Populus Rhizosphere	MDVPVQYFQSVITIELAVSGALLWQMRFFESNTARREGEPLPDARLRVGLALVLGATVFGSLWAMADEGPKWAAVAVTIGLAVSLVPIVLRVLPPLAKDATTN
Ga0075432_103702241	3300006058	Populus Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESNAARREGEPLPDARLRVGLALVLGATLFGSLWAMADEGPKWAAVAVTI
Ga0070712_1010778062	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESNTARREGEPLPDARLRVGLALVLGATLFGSLWAMADEGPKWAAVAVTIGLAVSLVPI
Ga0079221_109983832	3300006804	Agricultural Soil	MDVPVQYFQSVIAIELAVSGALLWQMRFFESNTARREGEPLPDARLRVGLALVLGATVFGSLWAMADEGPKWAAVAVTIGLAVSLV
Ga0075421_1004095421	3300006845	Populus Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESSTARREGEPLPDARLRVALALILGATLFGSLWAIADEGPKWAAQVVTIGL
Ga0075431_1004069191	3300006847	Populus Rhizosphere	VPVQYFQSVIAIELAVAGALLWQIRYFESRDRTERESKQLPDARLRLGLALVLGTTLFGSLWAMADEGPKWAAVAVTIGLAISLIPILL
Ga0075431_1016859632	3300006847	Populus Rhizosphere	MDIPVQYFQSVIAIELAVSGALLWQIRFFESNTRRQGDPLPDARLRLGLALVLGTTLFGSLWAMADEGPKWAAVVVTVGLALSL
Ga0075426_100303906	3300006903	Populus Rhizosphere	MDVPVQYFQSVITIELAVSGALLWQMRFFESNTARREGEPLPDARLRVGLALVLGATVFGSLWAMADEGPKWAAVAVTIGLAVSLVPI
Ga0105250_102018182	3300009092	Switchgrass Rhizosphere	MEVPVQYFQSVIAIELAVTGALLWQIRYFEPRDSNQSAEHLTDPRLKFAIAVVLSATVFGSLWAMADEGPKWAAIAVTIGLAVSLIPIILRVLPPLARDA
Ga0111539_125605762	3300009094	Populus Rhizosphere	MGIPVQYFQSVIAIELAVSGALLWQIRFFESNTGRREGDPLPDARLRLGLALVLGTTLFGSLWAMADEGPKWAAVVVTIGLALSLVPIGLRVLPPL
Ga0105245_118195461	3300009098	Miscanthus Rhizosphere	VDVPVQYFQSVIAIELAVAGALLWQMHFFESSAARREGESLPDARLRVGLALVLGATVFGSLWAMADEGPKWAAVAVTIGLALSVVPILLRVLPPLA
Ga0075418_104736003	3300009100	Populus Rhizosphere	VIADVPVQFFQSVITIELAVAGALLWQIRYFEPRDELRNSAHLPDPRLRIGIALVMGATIFGALWAIADEGPKWAAIAVTLGLSISVVPILVRVLPPLRR
Ga0105247_100721271	3300009101	Switchgrass Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESDSARREGEPPPDARLRLGLALVLGATVFGSLWAMADEGPKWAAVAVTIGLALSLVPILLRVLPPL
Ga0105247_106089141	3300009101	Switchgrass Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESDSARREGEPLPDARLRLGLALVLGATMFGSLWAMADEGPKWAAVAVTIGLALSLV
Ga0105247_116025482	3300009101	Switchgrass Rhizosphere	VDVPVQFFQSVIAIELAVSGALLWQMRFFESSTARREGKPLPDARLRVALALVLGATVFGSLWAIADEGPKWAALAVTIGLAVSLVPILLRVLPPLAKDA
Ga0114129_128558842	3300009147	Populus Rhizosphere	VDVPVQYFQSVIAIELAVTGALLWQIRFFESRDTTPRDGEQLPDPRLRLGLALVLGATLFGSLWAMADEGPKWAALAVTVGLAVSITPILLRVLPPLAKNA
Ga0114129_129570572	3300009147	Populus Rhizosphere	MDIPVQYFQSVIAVELAVTGALLWQIRFFEPDTARRQGVPLPDARLRAGLALVLGATVFGSLWAMADEGPKWAAVAVTIGLAVSLVPILLRALPPLAKDATTNERDPD
Ga0114129_129856962	3300009147	Populus Rhizosphere	MPHIAAMDVPVQYFQSVITIELAVAGALLWQIHYFDSKSRTDRDAAHLPDPRLRLGLGLVLSITVFGSLWAIADEGPRWAAAAVAIGLAVSLLPILLRVL
Ga0075423_131182661	3300009162	Populus Rhizosphere	VIADVPVQFFQSVITIELAVAGALLWQIRYFEPRDELRNSAHLPDPRLRIGIALLMGATIFGALWAIADEGPKWAAIAVTLGLSISVVPILVRVLPP
Ga0105242_109771142	3300009176	Miscanthus Rhizosphere	LEAARVGAPLVDVPVQYFQSIIAIELAVAGALLWQMRYFESSAARREGEPLPDARLRVALAVVLGVTLFGSLWAMADEGPKWAALFVT
Ga0105249_119321131	3300009553	Switchgrass Rhizosphere	VDVPVQYFQSVIAIELAVAGALLWQMRFFESSTARREGEPLPDARLRVALALVLGATVFGSLWAMADEGPKWAALFVTIGLAVSLVPILLRVLPP
Ga0105249_131912371	3300009553	Switchgrass Rhizosphere	VDVPVQFFQSVIAIELAVTGALLWQIRYFEPGDANRREGERRPDSRLRLGLALVLGLTMFGSLWAIADEGPKWAAVAVTVGLAVSLIP
Ga0126384_117990001	3300010046	Tropical Forest Soil	VRIPLILDVPVQFFQSVIAVELAVTGALLWQMRYFESREARARQDNRLPDSRLRLGLALVLGATVFGSLWAMADEGPKWAAVAVTIGLAVSLIPILLRVLAPLARE
Ga0126377_132034891	3300010362	Tropical Forest Soil	MDVPVQYFQSVIAIELAVAGALLWQMRFFESGDAARRDRERLPDSRLRLGVALVLGTTVFGSLWAMADEGPKWAAVLVT
Ga0105239_119727341	3300010375	Corn Rhizosphere	MDVPVQFFQSVIAIELAVAGALLWQIRFFESGDDARRESGHVPSARLRLGLALVLGVTIFGSLWAMADEGPKWAALLVTVG
Ga0134126_104460433	3300010396	Terrestrial Soil	MDVPVQYFQSVIAIELAVSGALLWQMRFFESDSARREGEPLPDARLRLGLALVLGATMFGSLWAMADEGPKWAAVAVTIGLALSLVPILLRVLPPLANDAATKE
Ga0157287_10963031	3300012885	Soil	VDVPVQFFQSVIAIELAVAGALLWQIRYFEPRDAKRRESESLPDARLRVGLALVLGATLFGSLWAIADEGPKWAALAVTVGLAISLIPIGLRVLPPLAKDATTNE
Ga0157285_102547071	3300012897	Soil	VDVPVQFFQSAIAIELAVAGALLWQIRFFESGDRARRDGEHLPDSRLRRGLALVLGLTIFGSLWAIADEGPKWAALAVTVGLAISLIPI
Ga0157299_100239511	3300012899	Soil	VDVPVQFFQSVIAIELAVAGALLWQIRYFEPRDAKRRESESLPDARLRVGLALVLGATLFGSLWAIADEGPKWAALAVTVGLA
Ga0157298_102511072	3300012913	Soil	VDVPVQFFQSVIAIELAVAGALLWQIRYFEPRDAKRRESESLLDARLRVGLALVLGATLFGSLWAIADEGPKWAALAVTVGLAISLIPIGLRVLPPLAKDATTNE
Ga0137407_101206424	3300012930	Vadose Zone Soil	MDVPVQYFQSVIAIELAVSGALLWQMRFFESRTARRAGESLPDARLRVGLALALGATLFGSLWAMADDGPKWAALAVTIGLAVSLVPILLRVLPPLAKDATS
Ga0162653_1000652811	3300012937	Soil	MDVPVQYFQSVIAIELAVSGALLLQMRFFESNSARREGDPLPDARLRVGLALVLGATVFGSLWAMADDGPKWAAVAVTIFVIENHR*
Ga0162651_1000865691	3300012938	Soil	MDVPVQYFQSVIAIELAVSGALLWQMRFFESNSARREDEPLPDAQLRVGLALVLGATVFGSLWAMADEGPKWAAVAVTIGLALSLVPILLRVLPPLAKDAATKE
Ga0164309_101918021	3300012984	Soil	VDVPVQYFQSVIAIELAVTGALLWQIRFFESRDSVRTKGEHVPDSRLRVGMALVLGATVVGSLWAMVDEGDSRWPAVVVTVGLAISLVPILLRVLPPLAKDAAT
Ga0164309_107847941	3300012984	Soil	LTVRLQIWRVGAPVDVPVQYFQSVIAIELAVSGALLWQMRFFESSTARREGEPLPDARLRVALALVLGATVFGSLWAMAGEGPKWAAVAVTIGLA
Ga0157374_110084232	3300013296	Miscanthus Rhizosphere	MDVPVQYFQSVIAIELAVTGALLWQMRFFESRTARREGEPLPDARLRVALALVLGATLFGSLWAMADEGPKWAAVAVTIGLAVSLVPLLLGVLPPLAKGGGA
Ga0157378_102650424	3300013297	Miscanthus Rhizosphere	VDVPVQFFQSVIAIELAVTGALLWQIRFFESGDRARRESEHLPDSRLRLGLALVLGSTLFVSLWAIADEGPKWAALAVTVGLAISLIPILLRVLPPLAK
Ga0157378_121312622	3300013297	Miscanthus Rhizosphere	LEAARVGAPLVDVPVQYFQSIIAIELAVTGALLWQIRFFESNTARRQDDPLPDARLRLGLALVLGATLFGPLWAMADEGPKWAAVVVTIGLALSLVPIGLRVLPP
Ga0163162_121699022	3300013306	Switchgrass Rhizosphere	MSVPVQYFQSVIALELAVTGALLWQMRYFEARDPNRPDAPRLPDARLRLGLAAVIGATLFGSLWAMADEGPKWAAVAVTIGLAISLLPILIRVLPPL
Ga0157372_125754702	3300013307	Corn Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESRTARREAEPLPDARLRVALALVLGATLFGSLWAMADEGPKWAAQVVTIGLAVSLVPILLRVLPPLVKDA
Ga0157380_105973482	3300014326	Switchgrass Rhizosphere	VDVPVQFFQSVIAIELAVTGALLWQIRFFESGDRARRESEHLPDSRLRLGLALVLGSTLFVSLWAIADEGPKWAALAVTVGLAISLIPILLRVLPPLAKDAS
Ga0157379_110197211	3300014968	Switchgrass Rhizosphere	MTDPILAAARGVPVQFFQSAIAIELAIAGALLWQIRFFEPTDKTPRTNEHPHDSRVRLGFAIVLGATLFGSLWAMADEGPKWAALAVTVGLAVSAIPVM
Ga0157379_122205342	3300014968	Switchgrass Rhizosphere	VDVPVQYFQSVIAIELAVTGALLWQMRFFESRSAERPDRKSLPDPRLRLGLALVLGATVFGSLWAMADERQSWAATAVTVGLAVSVIPILLRVLPPLA
Ga0157376_104130712	3300014969	Miscanthus Rhizosphere	VDVPVQYFQSVIAIELAVAGALLWQIRFFESKDTTRRDGEQLPDPRLRLCLALVLGATLFGSLWAMADEGPKWAALAVTIGLAVSLTPILLRVLPPLAKDARTQGRTSAILATP
Ga0157376_127982101	3300014969	Miscanthus Rhizosphere	MSPRFGCATTGYSESRSLVDVPVQFFQSVIAIELAVTGALLWQIRFFESGDRARRESEHLPDSRLRLGLALVLGSTLFGSLWAIADEGPKWAALAVTVGLAI
Ga0173480_100579171	3300015200	Soil	VEVPVQFFQSVIAIEVAVSGALLWQIRFFESRDAQRREREHLPDARLRLGLALVLGATIFGSLWAIADEGPKWAALLVTVGLAVSLVPILLRVLPPLARDAR
Ga0173480_104638432	3300015200	Soil	VDVPVQYFQSVIAIELAVTGALLWQIRFFESNGTERPEDEHLPDARLRVGMALVLGATVFGSLWAMVDEGRSRWPAIAVTIGL
Ga0184640_101769661	3300018074	Groundwater Sediment	LDVPVQYFQSVITIELAVSGALLWQIRYFESSTARREGEPLPDARLRVGLAVVMGATVFLSLWAMADEGPKWAALAVTIGLAVSLVPILVR
Ga0190269_118819611	3300018465	Soil	VDVPVQFFQSVIAIELAVTGALLWQIRFFESGDRARRKNEHVPDSRLRLGLALVLGLTVFGSLWAIADEGPKWAALAVTVGLAISLIPILLRVLPPLAKDASTDKRDP
Ga0173482_100835561	3300019361	Soil	VDVPVQYFQSVITIELAVAGALLWQMHYFESSTARREGKPLPDARLRVALALVLGATVFGSLWAMADEGPKWAALLVTIGLAVSLVPIVLGCYRRWRRMLRPTSATPTTP
Ga0222622_106771882	3300022756	Groundwater Sediment	MPGVLDGAACQRESWAALDVPVQYFQSVITIELAVSGALLWQIRYFESNTARREGEPLPDARLRVGLAVVMGATVFLSLWAMADEGPKWAALAVTIGLAVSLVPILVRVLPPLA
Ga0247790_100307333	3300022915	Soil	VDVPVQFFQSVIAIELAVAGALLWQIRYFEPRDAKRRESESLPDARLRVGLALVLGATLFGSLWAIADEGPKWAALAVTVGLAISLIPIGLRVLPPLAK
Ga0247748_10680942	3300023168	Soil	VDVPVQFFQSVIAIELAVAGALLWQIRYFEPRDAKRRESESLPDARLRVGLALVLGATLFGSLWAIADEGPKWAALAVTVGLAISLIPIGLRVLPPLAKDAT
Ga0207687_101077921	3300025927	Miscanthus Rhizosphere	VRLERWRVGAPVDVPVQFFQSVIAIELAVSGALLWQMRFFESSTARREGKPLPDARLRVALALVLGATVFGSLWAIADEGPKWAALAVTIGLAVSLVPILLRCYR
Ga0207664_102688933	3300025929	Agricultural Soil	LTALRPTWRVGASVDVPVQYFQSIIAIELAVTGALLWQIRFFESNATRREGKPLPDARLRVALALVLGATVFGSLWAMADEGPKWAALVVTIGLAVSLVPILLRVLPPLARDA
Ga0207686_111313811	3300025934	Miscanthus Rhizosphere	MDVPVQYFQSVIAIELAVTGALLWQMRFFESSTARREGEPLPDARLRVALALILGATLFGSLWAMADEGPKWAAQVVTIGLAVSLVPI
Ga0207704_102225563	3300025938	Miscanthus Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESNAARREGEPLPDARLRVGLALVLGATVFGSLWAMADEGPKWAAVAVTIGLAVSLVPIVLRVLPP
Ga0207704_111497891	3300025938	Miscanthus Rhizosphere	VRSVLAHGDIESPIVVAADVPVQYFQSVITIELAVTGALLWQMRYFESTEARRRDGGHLPDARLRLGLALVLGATLFGSLWAMADEGPKWAAIVVTLGLAISVLPILVGVLPPLRKD
Ga0207651_111068532	3300025960	Switchgrass Rhizosphere	VDVPVQYFQSVIAIELAVAGALLWQIRFFESKDTTRRDGEQLPDPRLRLCLALVLGATLFGSLWAMADEGPKWAALAVTIGLAVSLTPILLRVLPPLAKDARTNERDP
Ga0207677_114344531	3300026023	Miscanthus Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRFFESDSARREGEPLPDARLRLGLALVLGATMFGSLWAMADEGPKWAAVAVTIGLALSLVPILLRVLPPL
Ga0207626_1013411	3300027465	Soil	MDIPVQYFQSVIAIELAVSGALLWQIRFFESKTARRQGDPLPDARLRLGLALVLGMTVFGSLWAMADEGPRWAAVAVTIGLALSL
Ga0209814_102081191	3300027873	Populus Rhizosphere	MDVPVQYFQSVIAIELAVSGALLWQMRYFEPSTARREGEPLPDARLRVGLALVLGATLFGSLWAMADEGPKWAAVAVTIGLAVSLVPILLRVLP
Ga0209814_102149392	3300027873	Populus Rhizosphere	MDIPVQYFQSVIAIELAVSGALLWQIRFFESNTRRQGDPLPDARLRLGLALVLGTTLFGSLWAMADEGPKWAAVVVTVGLALSLVPIGLRVLPPLT
Ga0207428_112772602	3300027907	Populus Rhizosphere	VDVPVQFFQSVIAIELAVTGALLWQIRFFEPGARRDSGHLPDSRLRLGVALVLGSTLFGSLWAIADGGPKWAALAVTVGLAISLTPILLRVLPPLAKDASTDER
Ga0268264_116359921	3300028381	Switchgrass Rhizosphere	VDVPVQYFQSVIAIELAVAGALLWQIRFFESKDTTRRDGEQLPDPRLRLCLALVLGATLFGSLWAMADEGPKWAALAVTIGLAVSLT
Ga0247828_110277611	3300028587	Soil	VDVPVQFFQSVIAIELAVTGALLWEIRFFESGDRASRESEHLPDSRLRLGLALVLGSTLFGSLWAIADEGPKWAALAVTVGLAISLIPILLR
Ga0307282_106398821	3300028784	Soil	MPGVLDGAACQRESWAALDVPVQYFQSVITIELAVSGALLWQIRYFESSTAQREGEPLPDARLRVGLAVVMGATVFLSLWAMADEGPKWAALAVTIGLAVSLVPILVRVLPPLA
Ga0307305_105230681	3300028807	Soil	VDVPVQFFQSVIAIELAVTGALLWEIRFFESGDRARRDSEHLPDSRLRLGLALVLGLTLFGSLWAIADEGPKWAALAVTVGLAISLIPI
Ga0307310_100706621	3300028824	Soil	VDVPVQYFQSVIAIELAVTGALLWQIHFFESRDTARPEGEHLPDSRLRVAALVLGATVFGSLWAMVDEGHSRWPAVAVTVGLAISLVPILL
Ga0307278_104133151	3300028878	Soil	VIAIELAVAGALLWQIRYFESGDRTRQETENLPDSRLRLGLALVLGATLFASLWAIADEGPKWAALAVTVGLAISLIPIVLRVLPPL
Ga0247827_105732871	3300028889	Soil	VDVPVQFFQSAIAIELAVAGALLWQIRFFEPRDARRREPESLPDARLRVGLALVLGATLFGSLWAIADEGPKWAALAVTVGLAISLIPIGLRVLPPL
Ga0247826_104221781	3300030336	Soil	VDVPVQYFQSVIAIELAVAGALLWQIRYFESPEKSRRDDVRPPDSRLRLGLALVLAATLFGSLWAMADEGPKWAAVAVTIGLAVSVLPIGLRVLPPLAKD
Ga0268241_101133661	3300030511	Soil	VDVPVQYFQSVITIELAVAGALLWQMHYFESREATPREHLPDARLRVGLAVVIGGTLFGSLWAMADEGPKWAAVLVTIGLAVSIVPILLRGLPSLVRDATT
Ga0307468_1009217831	3300031740	Hardwood Forest Soil	MDVPVQYFQSVIAIELAVSGALLWQIRYFEPRDRPRRGGDRLPDSRLRLGLALVLGATMFGSLWAIADEGPKWAAVAVTVGLAVSLI
Ga0307471_1009348572	3300032180	Hardwood Forest Soil	VDVPVQFFQSVIAIELAVTGALLWQMRFFETDAKRESERLPDARIRLALAVVLGATLFGSLWGIADEGPKWAGVAVTIGV
Ga0307471_1024892112	3300032180	Hardwood Forest Soil	MDVPVQYFQSVIAIELAVSGALLWQMRFFESNTARREGEPLPDARLRVGLALVLGATLFGSLWAMADEGPKWAAVAVTIGLAVSLVPILLRVLPPLAKDA
Ga0307472_1005559191	3300032205	Hardwood Forest Soil	MTESWAAMDVPVQYFQSVIAIELAVAGALLWQIHYFDPGAKAARDKERPPDARLRLGLALVLGTTLFGSLWAMADEGPKWAAVLVTIGLAISLIPIGLRVLPSLARDA
Ga0307472_1010686181	3300032205	Hardwood Forest Soil	VGEDRFGSSILNRAMDVPVQYFQSVIAIELAVTGALLWQIRFFESRDAPGRDGERLPDSRLRLGLALVLGATLFGSLWAIADEGPKWAAVAVTIGLAVSLTPILLRVLPPLAKDAKTNE
Ga0307472_1020668651	3300032205	Hardwood Forest Soil	MDVPVQFFQSAIAIELAVTGALLWQIRFFEPRDARRRDSKTLPDSRLRLGLAIVLGATLFGSLWAIADEGPKWAALAVTVALAVS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F064969

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences