Metagenome / Metatranscriptome Family F065065

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065065
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	95 residues
Representative Sequence	MRLLYSLVAAMLMTVLLPVLHASAFTSDPTSGTNPDGSPRFVDPDDQIHSLFSGRSGLNEDGWADRSSTPRNAFPSPGGTNQGFTFPSWFFPTSPGR
Number of Associated Samples	102
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.93 %
% of genes near scaffold ends (potentially truncated)	37.50 %
% of genes from short scaffolds (< 2000 bps)	88.28 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.125 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.562 % of family members)
Environment Ontology (ENVO)	Unclassified (30.469 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 28.00% β-sheet: 3.20% Coil/Unstructured: 68.80%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01255	Prenyltransf	4.69
PF04392	ABC_sub_bind	3.12
PF07883	Cupin_2	1.56
PF07452	CHRD	1.56
PF11994	DUF3489	1.56
PF06039	Mqo	1.56
PF13683	rve_3	1.56
PF02738	MoCoBD_1	1.56
PF00118	Cpn60_TCP1	0.78
PF07690	MFS_1	0.78
PF13458	Peripla_BP_6	0.78
PF07978	NIPSNAP	0.78
PF03006	HlyIII	0.78
PF10108	DNA_pol_B_exo2	0.78
PF00115	COX1	0.78
PF00344	SecY	0.78
PF02774	Semialdhyde_dhC	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	4.69
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.12
COG0579	L-2-hydroxyglutarate oxidase LhgO	Carbohydrate transport and metabolism [G]	1.56
COG0002	N-acetyl-gamma-glutamylphosphate reductase	Amino acid transport and metabolism [E]	0.78
COG0136	Aspartate-semialdehyde dehydrogenase	Amino acid transport and metabolism [E]	0.78
COG0201	Preprotein translocase subunit SecY	Intracellular trafficking, secretion, and vesicular transport [U]	0.78
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.78
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
All Organisms	root	All Organisms	46.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
cellular organisms	root	All Organisms → cellular organisms	46.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.25 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	7.81 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	25.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7.81 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.78 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.28 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.81 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.12 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.56 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.78 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	7.81 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	6.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.12 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.34 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1.56 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %
Stappiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	7.81 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	6.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.12 %
Defluviicoccus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus	1.56 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Roseibium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	7.03 %
Hyphomicrobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	4.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.12 %
unclassified Hyphomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium	1.56 %
unclassified Defluviicoccus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → unclassified Defluviicoccus	1.56 %
Roseibium denhamense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium → Roseibium denhamense	0.78 %
Bradyrhizobium niftali	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium niftali	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.12 %
Mycolicibacterium septicum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium septicum	7.03 %
Hyphomicrobium denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	4.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.12 %
Hyphomicrobium sp. 99	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99	1.56 %
Defluviicoccus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → unclassified Defluviicoccus → Defluviicoccus sp.	1.56 %
Roseibium denhamense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium → Roseibium denhamense	0.78 %
Bradyrhizobium niftali	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium niftali	0.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.78 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17259447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3458	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1020644	All Organisms → cellular organisms → Bacteria → Proteobacteria	1044	Open in IMG/M
3300001545\|JGI12630J15595_10001378	All Organisms → cellular organisms → Bacteria	5244	Open in IMG/M
3300001545\|JGI12630J15595_10084858	Not Available	622	Open in IMG/M
3300002906\|JGI25614J43888_10035194	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300002908\|JGI25382J43887_10348716	Not Available	629	Open in IMG/M
3300002917\|JGI25616J43925_10008424	All Organisms → cellular organisms → Bacteria	4488	Open in IMG/M
3300003505\|JGIcombinedJ51221_10294157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	661	Open in IMG/M
3300004152\|Ga0062386_100374849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → unclassified Defluviicoccus → Defluviicoccus sp.	1143	Open in IMG/M
3300004152\|Ga0062386_100492320	Not Available	995	Open in IMG/M
3300005169\|Ga0066810_10140406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99	569	Open in IMG/M
3300005332\|Ga0066388_103622030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	788	Open in IMG/M
3300005434\|Ga0070709_10113558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1824	Open in IMG/M
3300005434\|Ga0070709_10767332	Not Available	754	Open in IMG/M
3300005437\|Ga0070710_10194647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1277	Open in IMG/M
3300005439\|Ga0070711_100134911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium septicum	1843	Open in IMG/M
3300005445\|Ga0070708_101872647	Not Available	556	Open in IMG/M
3300005764\|Ga0066903_108052137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → unclassified Hyphomicrobium → Hyphomicrobium sp. 99	540	Open in IMG/M
3300006173\|Ga0070716_100011192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4515	Open in IMG/M
3300006173\|Ga0070716_100316577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium septicum	1092	Open in IMG/M
3300006175\|Ga0070712_100406513	All Organisms → cellular organisms → Bacteria → Proteobacteria	1125	Open in IMG/M
3300006175\|Ga0070712_100585251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	943	Open in IMG/M
3300006176\|Ga0070765_100201091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1808	Open in IMG/M
3300006845\|Ga0075421_101846217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium septicum	649	Open in IMG/M
3300006854\|Ga0075425_101410997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium septicum	788	Open in IMG/M
3300009147\|Ga0114129_10635257	All Organisms → cellular organisms → Bacteria → Proteobacteria	1379	Open in IMG/M
3300009792\|Ga0126374_10235830	Not Available	1184	Open in IMG/M
3300010046\|Ga0126384_11701369	Not Available	596	Open in IMG/M
3300010048\|Ga0126373_10529210	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1225	Open in IMG/M
3300010343\|Ga0074044_10471855	Not Available	820	Open in IMG/M
3300010359\|Ga0126376_10057992	Not Available	2772	Open in IMG/M
3300010366\|Ga0126379_10439146	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300010398\|Ga0126383_11771765	Not Available	706	Open in IMG/M
3300012200\|Ga0137382_10509023	Not Available	856	Open in IMG/M
3300012202\|Ga0137363_10606462	Not Available	924	Open in IMG/M
3300012205\|Ga0137362_10685474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium niftali	881	Open in IMG/M
3300012363\|Ga0137390_11589777	Not Available	592	Open in IMG/M
3300012955\|Ga0164298_11115939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium septicum	592	Open in IMG/M
3300012961\|Ga0164302_10330326	All Organisms → cellular organisms → Bacteria → Proteobacteria	1010	Open in IMG/M
3300012971\|Ga0126369_10932268	Not Available	954	Open in IMG/M
3300012984\|Ga0164309_10532368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	905	Open in IMG/M
3300012984\|Ga0164309_11916741	Not Available	508	Open in IMG/M
3300012985\|Ga0164308_10067191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2394	Open in IMG/M
3300012987\|Ga0164307_10573290	Not Available	866	Open in IMG/M
3300012989\|Ga0164305_10252536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	1275	Open in IMG/M
3300012989\|Ga0164305_10361843	Not Available	1097	Open in IMG/M
3300016319\|Ga0182033_10762182	Not Available	851	Open in IMG/M
3300016341\|Ga0182035_10961226	Not Available	756	Open in IMG/M
3300016357\|Ga0182032_11419847	Not Available	601	Open in IMG/M
3300016404\|Ga0182037_10457724	Not Available	1062	Open in IMG/M
3300016422\|Ga0182039_10906228	Not Available	787	Open in IMG/M
3300016445\|Ga0182038_11335204	Not Available	641	Open in IMG/M
3300017975\|Ga0187782_11343485	Not Available	561	Open in IMG/M
3300019887\|Ga0193729_1084416	Not Available	1233	Open in IMG/M
3300019887\|Ga0193729_1222161	Not Available	625	Open in IMG/M
3300019890\|Ga0193728_1143722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	1057	Open in IMG/M
3300020579\|Ga0210407_10513085	Not Available	937	Open in IMG/M
3300020579\|Ga0210407_10798929	Not Available	728	Open in IMG/M
3300020580\|Ga0210403_10579172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	908	Open in IMG/M
3300020581\|Ga0210399_11409447	Not Available	544	Open in IMG/M
3300020583\|Ga0210401_10580226	Not Available	983	Open in IMG/M
3300021168\|Ga0210406_10377589	Not Available	1139	Open in IMG/M
3300021168\|Ga0210406_10432973	Not Available	1049	Open in IMG/M
3300021168\|Ga0210406_10805824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	714	Open in IMG/M
3300021170\|Ga0210400_10819981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	762	Open in IMG/M
3300021178\|Ga0210408_10317891	Not Available	1241	Open in IMG/M
3300021178\|Ga0210408_11486954	Not Available	508	Open in IMG/M
3300021404\|Ga0210389_10789769	Not Available	742	Open in IMG/M
3300021475\|Ga0210392_11023213	Not Available	619	Open in IMG/M
3300021560\|Ga0126371_10340321	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300022530\|Ga0242658_1060889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium septicum	824	Open in IMG/M
3300025905\|Ga0207685_10696458	Not Available	553	Open in IMG/M
3300025906\|Ga0207699_10889719	Not Available	657	Open in IMG/M
3300025915\|Ga0207693_10336180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium septicum	1182	Open in IMG/M
3300025915\|Ga0207693_10725100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	769	Open in IMG/M
3300025939\|Ga0207665_10307504	Not Available	1187	Open in IMG/M
3300025939\|Ga0207665_10340515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium septicum	1130	Open in IMG/M
3300026304\|Ga0209240_1004079	All Organisms → cellular organisms → Bacteria	5510	Open in IMG/M
3300027603\|Ga0209331_1078645	All Organisms → cellular organisms → Bacteria → Proteobacteria	819	Open in IMG/M
3300027603\|Ga0209331_1085514	Not Available	779	Open in IMG/M
3300027610\|Ga0209528_1011173	All Organisms → cellular organisms → Bacteria → Proteobacteria	1944	Open in IMG/M
3300027635\|Ga0209625_1113607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300027651\|Ga0209217_1084873	Not Available	917	Open in IMG/M
3300027703\|Ga0207862_1122399	Not Available	781	Open in IMG/M
3300027812\|Ga0209656_10146352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Defluviicoccus → unclassified Defluviicoccus → Defluviicoccus sp.	1189	Open in IMG/M
3300027824\|Ga0209040_10159084	Not Available	1211	Open in IMG/M
3300027824\|Ga0209040_10300274	Not Available	782	Open in IMG/M
3300027903\|Ga0209488_10222387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium septicum	1420	Open in IMG/M
3300028047\|Ga0209526_10201815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium denitrificans	1377	Open in IMG/M
3300028047\|Ga0209526_10407781	Not Available	901	Open in IMG/M
3300028536\|Ga0137415_11111388	Not Available	604	Open in IMG/M
3300028906\|Ga0308309_11499931	Not Available	576	Open in IMG/M
3300031231\|Ga0170824_128763215	Not Available	829	Open in IMG/M
3300031446\|Ga0170820_17570080	Not Available	786	Open in IMG/M
3300031543\|Ga0318516_10000804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10799	Open in IMG/M
3300031545\|Ga0318541_10045904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2225	Open in IMG/M
3300031545\|Ga0318541_10273766	Not Available	940	Open in IMG/M
3300031564\|Ga0318573_10565615	Not Available	612	Open in IMG/M
3300031572\|Ga0318515_10067288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1834	Open in IMG/M
3300031573\|Ga0310915_10162902	Not Available	1547	Open in IMG/M
3300031719\|Ga0306917_10235794	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300031723\|Ga0318493_10005677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4880	Open in IMG/M
3300031747\|Ga0318502_10001718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8210	Open in IMG/M
3300031763\|Ga0318537_10297752	Not Available	597	Open in IMG/M
3300031768\|Ga0318509_10207204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1091	Open in IMG/M
3300031859\|Ga0318527_10067573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1427	Open in IMG/M
3300031890\|Ga0306925_11074422	Not Available	815	Open in IMG/M
3300031897\|Ga0318520_11100059	Not Available	504	Open in IMG/M
3300031910\|Ga0306923_11002210	Not Available	907	Open in IMG/M
3300031910\|Ga0306923_11172265	Not Available	823	Open in IMG/M
3300031910\|Ga0306923_12089974	Not Available	572	Open in IMG/M
3300031912\|Ga0306921_10379997	Not Available	1650	Open in IMG/M
3300031912\|Ga0306921_10811061	All Organisms → cellular organisms → Bacteria	1068	Open in IMG/M
3300031942\|Ga0310916_10719246	Not Available	844	Open in IMG/M
3300031945\|Ga0310913_10107530	All Organisms → cellular organisms → Bacteria	1894	Open in IMG/M
3300031954\|Ga0306926_11225549	Not Available	880	Open in IMG/M
3300032001\|Ga0306922_10120478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2790	Open in IMG/M
3300032001\|Ga0306922_10537462	Not Available	1243	Open in IMG/M
3300032001\|Ga0306922_12143958	Not Available	540	Open in IMG/M
3300032035\|Ga0310911_10443937	Not Available	751	Open in IMG/M
3300032065\|Ga0318513_10029628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2355	Open in IMG/M
3300032065\|Ga0318513_10558597	Not Available	560	Open in IMG/M
3300032068\|Ga0318553_10002947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6658	Open in IMG/M
3300032076\|Ga0306924_10349765	Not Available	1695	Open in IMG/M
3300032076\|Ga0306924_10450910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Stappiaceae → Roseibium → Roseibium denhamense	1469	Open in IMG/M
3300032261\|Ga0306920_100539234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1729	Open in IMG/M
3300033289\|Ga0310914_10798057	Not Available	842	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.66%
Host-Associated	Host-Associated	2.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.75%
Aquatic	Environmental → Aquatic	3.91%
Plants	Host-Associated → Plants	2.34%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.75%
Freshwater	Environmental → Aquatic → Freshwater	3.91%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.34%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.75%
Loam	Environmental → Terrestrial → Soil → Loam	23.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.34%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.56%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.53%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.34%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.69%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.34%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.34%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.34%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300027603	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_00075990	2088090014	Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFADPDDQIHSMFSGGAALNEDGWADRSSTQRNAFPSPGGPNQGFSFPSWFFPTSPGR
AF_2010_repII_A01DRAFT_10206442	3300000580	Forest Soil	MRLLYSLVAAMLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGRSGLNEDGWADRSSTPRNAFPSPGGTNQGFTFPSWFFPTSPGQ*
JGI12630J15595_100013786	3300001545	Forest Soil	MRFLYSFAVAMLLAILLPVLQSSAFTIDPASGTNPDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRHSAAPATVGTAQGITFPNWFFPTSPPR*
JGI12630J15595_100848582	3300001545	Forest Soil	MRFLYSFAVAMLLAILLPVLQASAFTIDSESGTNSDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFLPTLPRR*
JGI25614J43888_100351941	3300002906	Grasslands Soil	MRLLYSLAAAILVTVLLPVLHASAFSTDPTSGTNPDGSPRFVDPDDQIRSFFFGGSGVNEDGWADRNSAPRTAFPSPDGTNQGITFPTWFF
JGI25382J43887_103487162	3300002908	Grasslands Soil	MRLLYSLAAAMLMTVLLPVLHASAFTSDPTSGTNSDGSPRFVDPDDQIHSLFSTGSGLNEDGWSDRNSVPRNALRAPDGTNQGVTFPSWFFPTSPRW*
JGI25616J43925_100084243	3300002917	Grasslands Soil	MRLLYSLAAAILVTVLLPVLHASAFSTDPTSGTNPDGSPRFVDPDDQIRSFFFGGSGVNEDGWADRNSAPRTAFPSPDGTNQGITFPTWFFPTSPGR*
JGIcombinedJ51221_102941571	3300003505	Forest Soil	MRFLYSFAVAMLLAILVPVLQASAFTIDSESGTNSDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFSPTLPRR*
Ga0062386_1003748492	3300004152	Bog Forest Soil	MRLLYSLAAAMLLTALIPVLHASAFTIDTASGTNPDGSSRFVDPDEQIHSSFFGGSSVNEDGWADRNSVSRNAVPRTDEPTQGVTFPNWFFPTSPRR*
Ga0062386_1004923202	3300004152	Bog Forest Soil	PVLHASAFTIDSTSGTTPDGAPRFVDPDEQVQSFFSGGSALNEDGWSDRNSLSRNVSPAPDATTQGITFPNWFFPTSPRR*
Ga0066810_101404061	3300005169	Soil	MRLLYSFAVAMLLAILLPVVQASAFTIDSASGTNPDGSSRFMDPDEQIHSSFFGGSAVNEDGWADRNSVRRDVAPATDGTTQGITFPNWFFPTSPRH*
Ga0066388_1036220301	3300005332	Tropical Forest Soil	MRLLYSLVAAMLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFFGRSGLNEDGWADRSSTPRNAFPSPGGTNQGFTFPRWFFPTSPGR*
Ga0070709_101135584	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFADPDDQIHSMFSGGAALNEDGWADRSSTQRNAFPSPGGPNQGFSFPSWFFPTSPGR*
Ga0070709_107673322	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSMFSGGSGLNEEGWADRSSTQRNAFPSPGRPNQGFSFPSWFFPTAPGR*
Ga0070710_101946471	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	TIDSASGTNSDGSSRFVDPDEQIHSSLFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFFPTLPRR*
Ga0070711_1001349113	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSMFSGGAALNEDGWADRSSTQRNAFPSPGGPNQGFSFPSWFFPTSPGR*
Ga0070708_1018726472	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLYSLAAAMLVTVLLPVLHASAFSTDPTSGTNPDGSPRFVDPDDQIRSFFFGGSGVNEDGWADRNSAPRTASPSSDGTNQGITFPSWFFPTSPRR*
Ga0066903_1080521371	3300005764	Tropical Forest Soil	MRLLYSLVAAMLVTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFFGRSGLNEDGWADRSTTPRNAFTSPGGTNQGFSFPNWFFPTSPGR*
Ga0070716_1000111922	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFTDPDDQIHSLFSGGAGLNEDGWADRSSTQRNAFPSPGGTNQGFSFPSWFFPTSPGR*
Ga0070716_1003165773	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LLPVLHASAFTSDPASGTNPDGSPRFADPDDQIHSMFSGGAALNEDGWADRSSTQRNAFPSPGGPNQGFSFPSWFFPSSPGR*
Ga0070712_1004065132	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSMFSGGSGLNEEGWADRSSTQRNAFPSPGGSNQGFSFPSWFFPTAPGR*
Ga0070712_1005852512	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLYSLAAAMLVSVLLPVLHASAFTSDPTSGTNPDGSSRFVDPDDQIHSLFSGGSGVNEDGWSDRNSAARNAFPSSGESNQGITFPNWLFPTSPRR*
Ga0070765_1002010914	3300006176	Soil	MRLLYSFAVAMLLAILLPVVQASAFTIDSASGTNPDRSSRFVDPDEQIHSTFFGGSAVNEDGWADRHSAAPATVGTAQGITFPNWFFSTSPPR*
Ga0075421_1018462172	3300006845	Populus Rhizosphere	TLMTVLLPVLHASAFTSDPASGTNPDGSPRFADPDDQIHSMFSGGARLTEDGWADRSSIQRNAFPSPGGPNQGFSFPSWFFPTSPGR*
Ga0075425_1014109972	3300006854	Populus Rhizosphere	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSMFSGGSGLNEEGWADRSSTQRNAFPSPGGPNQGFSFPSWFFPTSPGR*
Ga0114129_106352571	3300009147	Populus Rhizosphere	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFADPDDQIHSMFSGGARLTEDGWADRSSIQRNAFPSPGGPNQGFSFPSWFFPTSPGR*
Ga0126374_102358301	3300009792	Tropical Forest Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGRSGLNEGGWADRSSTPRNALPSPGGTNQGFSFPSWFFPTSPGR*
Ga0126384_117013692	3300010046	Tropical Forest Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGRSGLNEDGWADRSSTPRNALPSPGETNQGFSFPSWFFPTSPGR*
Ga0126373_105292102	3300010048	Tropical Forest Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGRSGLNEDGWADRSSTPRNALPSPGETNQGFTFPSWFFPTSPGR*
Ga0074044_104718552	3300010343	Bog Forest Soil	MRLLYSLAVAMLLTVLLPVLHASAFTIDSTSGTTSDGSPRFVDPDEQVHSFFFGGSAVNEDGWADRNSVSRNVAPATDATNQGITFPSLFFPTSPRR*
Ga0126376_100579925	3300010359	Tropical Forest Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGRSGLNEGGWADRSSTPRNALPSPGGTNQGFSFPSWFFSTSPGR*
Ga0126379_104391462	3300010366	Tropical Forest Soil	MRLLYSLVAAMLVTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGRSGLNEGGWADRSSTPRNALPSPGGTNQGFSFPSWFFSTSPGR*
Ga0126383_117717652	3300010398	Tropical Forest Soil	MRLLYSLVAAMLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFFGRSGLNEDGWADRSSTPRNAFPSPGGTRPCTH*
Ga0137382_105090233	3300012200	Vadose Zone Soil	AMLLATLLPVLHASAFTIDPASGTNSDASSRFVDPDEQIHSSFFGGSTVNEDGWADRNSAYRNFSPGADGSKQGITFPNLFLPTLPRR*
Ga0137363_106064622	3300012202	Vadose Zone Soil	MRLLYSLAVAMLVTVLLPVLHASAFTTDPTSGMNADGSPRFVDPDDQIRSLFSGGLNEDGWSDRSSDRRNALPSPDRTDQGVTFPNWFFPTPRR*
Ga0137362_106854742	3300012205	Vadose Zone Soil	MRLLYSLAAAMLVTVLLPVLHASAFTTDPTSGTNPDGSPRFVDPDDQIHSLFSGGSGLNEDGWSDRSSAPRNAFPSPDGTNQGVTFPSWFFP
Ga0137390_115897771	3300012363	Vadose Zone Soil	MRLLYSLAVAMLVTVLLPVLHASAFTTDPTSGMNADGSPRFVDPDDQIRSLFSGGLNEDGWSDRSSDRRNALPSPDRTDQGVT
Ga0164298_111159391	3300012955	Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFADPDDQIHSMFSGGAGLNEDGWADRSSTQRNAFPSPGGPNQGFSFPSWFFPTAPGR*
Ga0164302_103303262	3300012961	Soil	VLQASAFTIDPTSGTNSDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFFPTLPRR*
Ga0126369_109322682	3300012971	Tropical Forest Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGRSGLNEDGWADRSSTPRNALPSPGGTNQGFSFPSWFFSTSPGR*
Ga0164309_105323682	3300012984	Soil	MRFLYSFAVAMLLAILLPVLHASAFTIDSASGTNSDGSSRFVDPDEQIHSSLFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFFPTLPRR*
Ga0164309_119167411	3300012984	Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFADPDDQIHSMFSGGAALNEDGWADRSSTQRNAFPSPGGPNQGFSFPSWFFPTSPGRQISQRAISAC*
Ga0164308_100671913	3300012985	Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFADPDDQIHSMFSGGAGLNEDGWADRSSTQRNAFPSPGGPNQGFSFPSWFFPTSPGR*
Ga0164307_105732902	3300012987	Soil	MRATLLPPSKASETSVLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFADPDDQIHSMFSGGAALNEDGWADRSSTQRNAFPSPGGPNQGFSFPSWFFPTSPGR*
Ga0164305_102525362	3300012989	Soil	MRFLYSFAVAMLLAILLPVLQASAFTIDSGSGTNSDGSSRFVDPDEQIHSSLFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFFPTLPRR*
Ga0164305_103618432	3300012989	Soil	MRLLYSFAIAMLLTILLPVLHASAFTIDPTSGTNADGSPRFVDPDEQVHSSFFGVSAVNEDGWADRYSAAPATVRTAHGITFPNWFFPTSPPR*
Ga0182033_107621821	3300016319	Soil	MRLLYSLVAAMLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGRSGLNEDGWADRSSTPRNALPSPGGTNQGFSFPNWFFPTSPGR
Ga0182035_109612262	3300016341	Soil	MRLVYSFATAVLLTVLLPVLHASAFTTGSAMATPDSSSGFVDPDEQVHSFFFGNSSVNEDGWADRNSVSRNLSAAPDATNQVGTFPNLLFPSVPRR
Ga0182032_114198472	3300016357	Soil	FHAATYSTERTSMRLLYSLATAMLVTLLLPVLHASAFTTDPTSGTNPDGSPRFTDPDEQIHSLFSGGSGLNEDGWFDRNSASRNVFPSPDRTNQGVTFPSWFFPTSPRW
Ga0182037_104577242	3300016404	Soil	VYGDLGQRKDCCMRRLFYSFATAALLTGLLPVLHAFAFTTGSTSATPDSSSGFVDPEEQVHSFFFGSSGVNEDGWADRNSVSRNLSPTPDATNQGGTFPNLLSPAAPRR
Ga0182039_109062281	3300016422	Soil	MRLLCYLAAAMLLTLLLPALPASAFTIDSASGTNPDGSSHFVDPDEQIHSSFFGGSAVNEDGWADRNSVSRNLSAAPDATNQVGTFPNLLFPSVPRR
Ga0182038_113352042	3300016445	Soil	MRRLFYSFATAALLTGLLPVLHAFAFTTGSTSATPDSSSGFVDPEEQVHSFFFGSSGVNEDGWADRNSVSRNLSPTPDATNQGATFPNLLSPTAPRR
Ga0187782_113434852	3300017975	Tropical Peatland	HLVYSLAAAILLVVLIPVLQASAFTMDSTSGTNSDGSARFVDPDEQVRSFLLFGSSGLNEDGWADRNSASRHIAPSSDETTRGIALPNWFFPTSPQR
Ga0193729_10844163	3300019887	Soil	MRFLYSFAVAMLLAILLPVLQSSAFTIDPASGTNPDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRHSAAPATVGTAQGITFPNWF
Ga0193729_12221611	3300019887	Soil	AFTMDPASGTNPDGSSRFVDPDEQIHSSFFGGSAVNEDGWADQNSPSRNFSSGADGRNQGITFPNVFFPTLPRR
Ga0193728_11437221	3300019890	Soil	ALRRPAQPKDPPMRFLYSFAVAMLLAILLPVLQASAFTIDSESGTNSDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGATFPNLFSPTLPRR
Ga0210407_105130852	3300020579	Soil	MRLLYSFAVAMLLAILLPVLQASAFTIDSESGTNSDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFFPTLPRR
Ga0210407_107989291	3300020579	Soil	MRPLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFTDPDDQIHSLFSGGAGLNEDGWADRSSTQRNAFPSPGGTNQGFSFPNWFFPTSPGR
Ga0210403_105791722	3300020580	Soil	MRFLYYFAVAMLLAILLPVLHASAFTIDSASGTNADGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFFPTLPRR
Ga0210399_107430902	3300020581	Soil	MRFLYSFAVAMLLAILVPVLQASAFTIDSESGTNSDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNLFLPTLPRR
Ga0210399_114094471	3300020581	Soil	MRLLYSLAAAMLVTVLLPVLHASAFSTDPTSGTNPDGSPRFVDPDDQIRSFLFGGSGVNEDGWADRNSAPRTAFPSSDGTNQGITFP
Ga0210401_105802262	3300020583	Soil	FAVAMLLAILLPVLHASAFTIDSASGTNSDGSSRFVDPDEQIHSSLFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFSPTLPRR
Ga0210406_103775892	3300021168	Soil	MRPLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFTDPDDQIHSLFSGGAGLNEDGWADRSSTQRNAFPSPGGTNQGFSFPNWFFPTSPG
Ga0210406_104329732	3300021168	Soil	MRLLYSFAVAMLLAILLPVLQASAFTIDSESGTNSDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFSPTLPRR
Ga0210406_108058242	3300021168	Soil	MRLLYSFAVAMLLAILLPVLQASAFTIDSASGTNADGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFFPTLPRR
Ga0210400_108199812	3300021170	Soil	HAILYSFAVAMLLAILLPVLQASAFTIDSESGTNSDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFFPTLPRR
Ga0210408_103178914	3300021178	Soil	SGTNSDGSSRYVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFSPTLPRR
Ga0210408_114869541	3300021178	Soil	MRLLYSLAAAILVTVLLRVLHASAFSTDPTSGTNPDGSPRFVDPDDQIHSLFFGRSGLNEDGWADRSSTSRNAFPSPSGTNQGPTFPSWFFPTSPGR
Ga0210389_107897691	3300021404	Soil	IVPNVLKDVRGRPFQNHQAVPGLPYARRSAQPKDPPMRFLYYFAVAMLLAILLPVLHASAFTIDSASGTNSDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFFPTLPRR
Ga0210392_110232132	3300021475	Soil	MRLLYSFAVAMLLAILLPVLQASAFTIDSASGTNSDGSSRFVDPDEQIHSSLFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFFPTLPRR
Ga0126371_103403211	3300021560	Tropical Forest Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGRSGLNEDGWADRSSTPRNALPSPGGTNQGFSFPNWFFRTSPGR
Ga0242658_10608892	3300022530	Soil	MRPLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFADPDDQIHSMFSGGAALNEDGWADRSSTQRNAFPSPGGPNQGFSFPSWFFPTSPGR
Ga0207685_106964581	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFTDPDDQIHSLFSGGAGLNEDGWADRSSTQRNAFPSPGGTNQGFSFPSWFFPTSPGR
Ga0207699_108897192	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFTDPDDQIHSLFSGGAGLNEDGWADRSSTQRNAFPSPGGTNQGFSCPNWFFPTSPGR
Ga0207693_103361802	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFADPDDQIHSMFSGGAGLNEDGWADRSSTQRNAFPSPGGPNQGFSFPSWFFPTAPGR
Ga0207693_107251001	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ASMRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSMFSGGSGQNEEGWADRSSTQRNAFPSPGRPNQGFSFPSWFFPTAPGR
Ga0207665_103075042	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSMFSGGSGLHEEGWADRSSTQRNAFPSPGRPNQGFSFPSWFFPTAPGR
Ga0207665_103405151	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	YSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFADPDDQIHSMFSGGAALNEDGWADRSSTQRNAFPSPGGPNQGFSFPSWFFPSSPGR
Ga0209240_10040795	3300026304	Grasslands Soil	MRLLYSLAAAILVTVLLPVLHASAFSTDPTSGTNPDGSPRFVDPDDQIRSFFFGGSGVNEDGWADRNSAPRTAFPSPDGTNQGITFPTWFFPTSPGR
Ga0209331_10786451	3300027603	Forest Soil	KDPPMRFLYSFAVAMLLAILLPVLQASAFTIDSESGTNSDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFLPTLPRR
Ga0209331_10855141	3300027603	Forest Soil	MRLLYSFAVSMLLTILLPVLHASAFTIDPTSGTNPDGSPRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITF
Ga0209528_10111732	3300027610	Forest Soil	MRFLYSFAVAMLLAILLPVLQSSAFTIDPASGTNPDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGATFPNLFLPTLPRR
Ga0209625_11136071	3300027635	Forest Soil	MRFLYSFAVAMLLAILLPVVQASAFTIDSASGTNPDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGAT
Ga0209217_10848731	3300027651	Forest Soil	MRFLYSFAVAMLLAILLPVLQSSAFTIDPASGTNPDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRHSAAPATVGTAQGITFPNWFFPTSPPR
Ga0207862_11223992	3300027703	Tropical Forest Soil	MRLVYSFATAVLLTVLLPVLHASAFTTGSAMATPDSSSGFVDPDEQVHSFFFGNSGVSEDGWADRNSVSRNLSAAPDATNQVGTFPNLLFPSVPRR
Ga0209656_101463523	3300027812	Bog Forest Soil	MSVRRILRRPAQPKDRPMRLLYSLAAAMLLTALIPVLHASAFTIDTASGTNPDGSSRFVDPDEQIHSSFFGGSSVNDEGWADRNSVSRHAVPGTDAPSQGVTFPNWLFPTSPPR
Ga0209040_101590841	3300027824	Bog Forest Soil	ALRRAAQPKGRPMRLLHALAAAMLLTVLIPVLHASAFTIDPASGTNPDGSSRFVDPDEQIHSSFFGGSSVNDEGWADRNSVSRHAVPGTDAPSQGVTFPNWLFPTSPPR
Ga0209040_103002742	3300027824	Bog Forest Soil	MLVTVLLPVLHASAFTIDSTSGTTPDGAPRFVDPDEQVQSFFSGGSALNEDGWSDRNSLSRNVSPAPDATTQGITFPNWFFPTSPRR
Ga0209488_102223872	3300027903	Vadose Zone Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFTDPDDQIHSLFSGGAGLNEDGWADRSSTQRNAFPSPGATNQGFSFPSWFFPTSPGR
Ga0209526_102018153	3300028047	Forest Soil	MRLLYSFAVSMLLTILLPVLHASAFTIDPTSGTNPDGSPRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGATFPNLFLPTLPRR
Ga0209526_104077812	3300028047	Forest Soil	MRFLYSFAVAMLLAILLPVLQASAFTIDSESGTNSDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGITFPNLFLPTLPRR
Ga0137415_111113881	3300028536	Vadose Zone Soil	MRLLYSFAVAMPLAILLPVLQASAFTMDPASGTNPDGSSRFVDPDEQIHSSFFGGSAVNEDGWADRNSAYRNFSPGADGSNQGATFPNLFL
Ga0308309_114999311	3300028906	Soil	MRLLYSFAVAMLLAILLPVVQASAFTIDSASGTNPDRSSRFVDPDEQIHSTFFGGSAVNEDGWADRHSAAPATVGTAQGITFPNWFFSTSPPR
Ga0170824_1287632152	3300031231	Forest Soil	HQRKCQFAVSRGDLHNPKERPMRLLYSFAIAMLLTILLPVLHASAFTIDPTSGTNADGSPRFVDPDEQVHSSFFGGSAVNEDGWADRYSAAPATVGTAHGITFPNWFFPTSPPR
Ga0170820_175700801	3300031446	Forest Soil	ERPMRLLYSFAIAMLLTILLPVLHASAFTIDPTSGTNADGSPRFVDPDEQVHSSFFGGSAVNEDGWADRYSAAPATVGTAHGITFPNWFFPTSPPR
Ga0318516_100008042	3300031543	Soil	MRLLYSLATAMLVTLLLPVLHASAFTTDPTSGTNPDGSPRFTDPDEQIHSLFSGGSGLNEDGWFDRNSASRNVFPSPDRTNQGVTFPSWFFPTSPRW
Ga0318541_100459042	3300031545	Soil	MRLLYSLATAMLVTLLLPVLHASTFTTDPTSGTNPDGSPRFTDPDEQIHSLFSGGSGLNEDGWFDRNSASRNVFPSPDRTNQGVTFPSWFFPTSPRW
Ga0318541_102737662	3300031545	Soil	MRLLYSLVAAMLVTVLLPVLHASAFTSDPASGTNYDGSPRFVDPDDQIHSLFSGGSGLNEDGWADQRSTPRNAFPSPGGANQGFTFPSWFFPTSPGR
Ga0318573_105656153	3300031564	Soil	MRLLYSLVAAMLVTVLLPVLHASAFTSDPASGTNYDGSPRFVDPDDQIHSLFSGGSGLNEDGWADQRSTPRNAFPSPGGANQGFTFPSWFFPT
Ga0318515_100672883	3300031572	Soil	MRLLYSLATAMLVTLLLPVLHASAFTTDPTSGTNPDGSPRFTDPDEQIHSLFSGGSGLNEDGWFDRNSASRNVFPSPDRTNQGVTFPSWFPTSPRW
Ga0310915_101629025	3300031573	Soil	MRLLYSLVAAMLVTVLLPVLHASAFTSDPASGTNYDGSPRFVDPDDQIHSLFSGGSGLNEDGWADQRSTPRNAFPSPGGANQGFTFPSWFFPTSPAR
Ga0306917_102357943	3300031719	Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGRSGLNEDGWADRSSTPRNALPSPGGTNQGFSFPNWFFPTSPGR
Ga0318493_100056774	3300031723	Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGRSGLNEDGWADRSSTPRNAFPSPGGTNQGFTFPSWFFPTSPGR
Ga0318502_100017189	3300031747	Soil	MRLLYSLATAMLVTLLLPVLHASAFTTDPTSGTNPDGSPRFTDPDEQIHSLFSGGSGLNEDGWFDRNSASRNVFPSPDRTNQGVTFPSWF
Ga0318537_102977522	3300031763	Soil	MRLLYSLVAAMLVTVLLPVLHASAFTSDPASGTNYDGSSRFVDPDDQIHSLFSGGSGLNEDGWADQRSTPRNAFPSPGGANQGFTFPSWFFPTSPAR
Ga0318509_102072042	3300031768	Soil	MRLLYSLATAMLVTLLLPVLHASAFTTDPTSGTNPDGSPRFTDPDEQIHSLFSGGSGLNEDGWFDRNSASRNVFPSPDRTNQGVTFPSWFFPTSPR
Ga0318527_100675731	3300031859	Soil	MRLLYSLATAMLVTLLLPVLHASAFTTDPTSGTNPDGSPRFTDPDEQIHSLFSGGSGLNEDGWFDRNSASRNVFPSPDRTNQGVTFPSWFFPT
Ga0306925_110744222	3300031890	Soil	MRRLFYSFATAALLTGLLPVLHAFAFTTGSTSATPDSSSGFVDPEEQVHSFFFGSSGVNEDGWADRNSVSRNLSPTPDA
Ga0318520_111000592	3300031897	Soil	MRLVYSFATAVLLTVLLPVLHASAFTTGSAMATPDSSSGFVDPDEQVHSFFFGNSGVSEDGWDDRNSV
Ga0306923_110022102	3300031910	Soil	MRRLFYSFATAALLTGLLPVLHAFAFTTGSTSATPDSSSGFVDPEEQVHSFFFGSSGVNEDGWADRNSVSRNLSPTPDATNQGGTFPNLLSPAAPRR
Ga0306923_111722652	3300031910	Soil	VRRSSRRDLINRRTSMRLLYSLAAAMLVSVLLPVLHASAFSTDPTSGTNPDGSPRFVDPDDQIRSFFFGGSGVNEDGWADRNSAPRTAFPSPDGTNQGITFPSWFFPTSPGR
Ga0306923_120899742	3300031910	Soil	MRRLFHSFATAVLLTGLLPVLHASAFTTGSTSGTPDSSSGFVDPEEQVHSFFFGGSGVNEDGWADRNSVSRNLSPTPDATNQGATFPNLLSPTAPRR
Ga0306921_103799973	3300031912	Soil	MRRLFYSFATAALLTGLLPVLHAFAFTTGSTSATPDSSSGFVDPEEQVHSFFFGSSGVNEDGWADRNSVSRNLSPTPDATNQGGTFP
Ga0306921_108110611	3300031912	Soil	MRLLYSLVAAMLVTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGGSGLNEDGWADQRSTPRNAFPSPGGANQGFTFPS
Ga0310916_107192462	3300031942	Soil	MRLLYSLVAAMLVTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGGSGLNEDGWADQRSTPRNAFPSPGGANQGFTFPSWFFPTSPGR
Ga0310913_101075302	3300031945	Soil	MRLLYSLVAAMLVTVLLPVLHASAFTSDPASGTNYDGSPRFVDPDDQIHSLFSGGSGLNEDGWADQRSTPRNAFPSPSGANQGFTFPSWFFPTSSGR
Ga0306926_112255491	3300031954	Soil	MRRLFYSFATAALLTGLLPVLHAFAFTTGSTSATPASSSGFVDPEEQVHSFFFGSSGVNEDGWADRNSVSRNLSPTPDATNQGGTFPNLLSPAAPRR
Ga0306922_101204784	3300032001	Soil	MRLLYSLVAAMLVTVLLPVLHASAFTSDPASGTNYDGSPRFVDPDDQIHSLFSGGSGLNEDGWADQRSTPRNAFPSPGGANHGFTFPSWFFPTSPGR
Ga0306922_105374622	3300032001	Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFFGRSGLNEDGWADRSSTPRNALPSPGGTNQGFSFPNWFFPTSPGR
Ga0306922_121439581	3300032001	Soil	LVAAMLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFFGRSGLNEDGWADRSSTPRNGFPSPGGTNQGFTFPSWFFPTSPGR
Ga0310911_104439371	3300032035	Soil	MRLLYSLVAATLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGRSGLNEDGWADRSSTPRNALPSPGGTNQGFSFPNWFF
Ga0318513_100296284	3300032065	Soil	MRLLYSLVAAMLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFSGRSGLNEDGWADRSSTPRNAFPSPGGTNQGFTFPSWFFPT
Ga0318513_105585971	3300032065	Soil	MRLLYSLVAAMLVTVLLPVLHASAFTSDPASGTNYDGSPRFVDPDDQIHSLFSGGSGLNEDGWADQRSTPRNAFPSPGGANHGFTFPSW
Ga0318553_100029477	3300032068	Soil	MRLLYSLVAAMLMTVLLPVLHASAFTSDPTSGTNPDGSPRFVDPDDQIHSLFSGRSGLNEDGWADRSSTPRNAFPSPGGTNQGFTFPSWFFPTSPGR
Ga0306924_103497653	3300032076	Soil	MRRLFYSFATAALLTGLLPVLHAFAFTTGSTSATPDSSSGFVDPEEQVHSFFFGSSGVNEDGWADRNSVSRNLSPTPDATNQGGAFPNLLSPAAPRR
Ga0306924_104509102	3300032076	Soil	RPDQPKGASMRLLYSLVAAMLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFFGRSGLNEDGWADRSSTPRNGFPSPGGTNQGFTFPSWFFPTSPGR
Ga0306920_1005392341	3300032261	Soil	MRLLYSLVAAMLMTVLLPVLHASAFTSDPASGTNPDGSPRFVDPDDQIHSLFFGRSGLNEDGWADRSSTPRNGFPSPGGTNQGFTFPSWFFPTSPGR
Ga0310914_107980572	3300033289	Soil	TSMRLLYSLAAAMLVSVLLPVLHASAFSTDPTSGTNPDGSPRFVDPDDQIRSFFFGGSGVNEDGWADRNSAPRTAFPSPDGTNQGITFPSWFFPTSPGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065065

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences