Metagenome / Metatranscriptome Family F065149

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065149
Family Type	Metagenome / Metatranscriptome
Number of Sequences	128
Average Sequence Length	70 residues
Representative Sequence	VEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDAEAAAR
Number of Associated Samples	100
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.74 %
% of genes near scaffold ends (potentially truncated)	88.28 %
% of genes from short scaffolds (< 2000 bps)	84.38 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.969 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (39.062 % of family members)
Environment Ontology (ENVO)	Unclassified (60.156 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (64.844 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.00% β-sheet: 37.00% Coil/Unstructured: 60.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01541	GIY-YIG	5.47
PF06725	3D	4.69
PF00072	Response_reg	3.91
PF10604	Polyketide_cyc2	3.12
PF02371	Transposase_20	2.34
PF10520	Lipid_desat	2.34
PF07311	Dodecin	2.34
PF00211	Guanylate_cyc	1.56
PF00355	Rieske	1.56
PF04238	DUF420	1.56
PF13561	adh_short_C2	0.78
PF00571	CBS	0.78
PF09509	Hypoth_Ymh	0.78
PF07681	DoxX	0.78
PF02036	SCP2	0.78
PF04333	MlaA	0.78
PF04972	BON	0.78
PF07929	PRiA4_ORF3	0.78
PF01594	AI-2E_transport	0.78
PF00076	RRM_1	0.78
PF04519	Bactofilin	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	2.34
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.34
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.56
COG2322	Cytochrome oxidase assembly protein CtaM/YozB, DUF420 family	Posttranslational modification, protein turnover, chaperones [O]	1.56
COG0628	Predicted PurR-regulated permease PerM	General function prediction only [R]	0.78
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.78
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.78
COG2853	Lipoprotein subunit MlaA of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.78
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.97 %
Unclassified	root	N/A	7.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.97 %
Unclassified	root	N/A	7.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.97 %
Unclassified	root	N/A	7.03 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.97 %
Unclassified	root	N/A	7.03 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.34 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	2.34 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.56 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.78 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	42.97 %
Unclassified	root	N/A	7.03 %
bacterium SCN 62-11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	2.34 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.78 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	42.97 %
Unclassified	root	N/A	7.03 %
bacterium SCN 62-11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	2.34 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.78 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	41.41 %
Unclassified	root	N/A	7.03 %
bacterium SCN 62-11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	2.34 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	39.06 %
Unclassified	root	N/A	7.03 %
Deltaproteobacteria bacterium RBG_13_65_10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_65_10	2.34 %
bacterium SCN 62-11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	2.34 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	39.06 %
Unclassified	root	N/A	7.03 %
Deltaproteobacteria bacterium RBG_13_65_10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_65_10	2.34 %
bacterium SCN 62-11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	2.34 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	39.06 %
Unclassified	root	N/A	7.03 %
Deltaproteobacteria bacterium RBG_13_65_10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_65_10	2.34 %
bacterium SCN 62-11	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	2.34 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.56 %
Kutzneria buriramensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → Kutzneria buriramensis	0.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.78 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10459297	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300004157\|Ga0062590_102573326	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	540	Open in IMG/M
3300005166\|Ga0066674_10015824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3198	Open in IMG/M
3300005166\|Ga0066674_10208604	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300005167\|Ga0066672_10205034	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1258	Open in IMG/M
3300005172\|Ga0066683_10077320	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2000	Open in IMG/M
3300005172\|Ga0066683_10520311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	726	Open in IMG/M
3300005174\|Ga0066680_10128967	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300005174\|Ga0066680_10258109	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1108	Open in IMG/M
3300005175\|Ga0066673_10074834	All Organisms → cellular organisms → Bacteria	1768	Open in IMG/M
3300005178\|Ga0066688_10375182	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300005179\|Ga0066684_10656193	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	705	Open in IMG/M
3300005180\|Ga0066685_10092544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2009	Open in IMG/M
3300005186\|Ga0066676_10049785	All Organisms → cellular organisms → Bacteria	2375	Open in IMG/M
3300005186\|Ga0066676_10103409	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300005186\|Ga0066676_10115496	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1648	Open in IMG/M
3300005332\|Ga0066388_108689309	Not Available	505	Open in IMG/M
3300005445\|Ga0070708_100918392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	822	Open in IMG/M
3300005446\|Ga0066686_10434214	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300005446\|Ga0066686_11135919	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300005447\|Ga0066689_10157996	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1353	Open in IMG/M
3300005447\|Ga0066689_10418423	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300005447\|Ga0066689_10860429	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300005450\|Ga0066682_10258212	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300005451\|Ga0066681_10888682	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	535	Open in IMG/M
3300005539\|Ga0068853_102106431	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_65_10	547	Open in IMG/M
3300005540\|Ga0066697_10691555	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300005552\|Ga0066701_10203443	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1214	Open in IMG/M
3300005552\|Ga0066701_10734117	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300005556\|Ga0066707_10052922	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2361	Open in IMG/M
3300005556\|Ga0066707_10388988	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300005557\|Ga0066704_10334718	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300005558\|Ga0066698_10823146	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300005559\|Ga0066700_10894630	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300005561\|Ga0066699_10194352	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300005569\|Ga0066705_10949975	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300005574\|Ga0066694_10158293	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300005586\|Ga0066691_10151926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1332	Open in IMG/M
3300005586\|Ga0066691_10900195	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300005598\|Ga0066706_11203350	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300006032\|Ga0066696_10084736	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300006034\|Ga0066656_10637456	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	687	Open in IMG/M
3300006034\|Ga0066656_11069022	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300006163\|Ga0070715_10736957	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300006175\|Ga0070712_101369357	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300006797\|Ga0066659_10282948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria → Kutzneria buriramensis	1257	Open in IMG/M
3300006797\|Ga0066659_11375837	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	589	Open in IMG/M
3300006854\|Ga0075425_101701255	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	710	Open in IMG/M
3300006871\|Ga0075434_100595654	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300006880\|Ga0075429_101929805	Not Available	511	Open in IMG/M
3300006969\|Ga0075419_11307063	Not Available	538	Open in IMG/M
3300007255\|Ga0099791_10103584	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300009012\|Ga0066710_100705503	All Organisms → cellular organisms → Bacteria	1539	Open in IMG/M
3300009012\|Ga0066710_102973311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	661	Open in IMG/M
3300009012\|Ga0066710_104894325	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300009088\|Ga0099830_10885185	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	738	Open in IMG/M
3300009088\|Ga0099830_11733951	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300009089\|Ga0099828_10716084	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300009090\|Ga0099827_10264154	All Organisms → cellular organisms → Bacteria	1449	Open in IMG/M
3300009137\|Ga0066709_103174965	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	600	Open in IMG/M
3300009176\|Ga0105242_12020450	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300010301\|Ga0134070_10046042	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300010301\|Ga0134070_10173500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	781	Open in IMG/M
3300010304\|Ga0134088_10390591	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M
3300010325\|Ga0134064_10326753	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	592	Open in IMG/M
3300010326\|Ga0134065_10101674	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	956	Open in IMG/M
3300010329\|Ga0134111_10340509	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300010333\|Ga0134080_10176568	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	916	Open in IMG/M
3300010333\|Ga0134080_10182963	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300010337\|Ga0134062_10048968	All Organisms → cellular organisms → Bacteria	1715	Open in IMG/M
3300010337\|Ga0134062_10584609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300010375\|Ga0105239_13635381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300011269\|Ga0137392_10503247	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300011270\|Ga0137391_10074959	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	2911	Open in IMG/M
3300011271\|Ga0137393_10430938	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	1130	Open in IMG/M
3300012096\|Ga0137389_10257688	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300012189\|Ga0137388_11842467	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	536	Open in IMG/M
3300012189\|Ga0137388_11962303	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300012202\|Ga0137363_10144403	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium SCN 62-11	1863	Open in IMG/M
3300012202\|Ga0137363_10560830	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	962	Open in IMG/M
3300012356\|Ga0137371_10493782	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300012373\|Ga0134042_1155317	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300012388\|Ga0134031_1254113	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012404\|Ga0134024_1266070	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300012922\|Ga0137394_10127389	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2158	Open in IMG/M
3300012923\|Ga0137359_10884026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	771	Open in IMG/M
3300012927\|Ga0137416_10391646	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1175	Open in IMG/M
3300012958\|Ga0164299_11289811	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300012972\|Ga0134077_10242048	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300012975\|Ga0134110_10007614	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4060	Open in IMG/M
3300012984\|Ga0164309_11677705	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300014154\|Ga0134075_10112860	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300014154\|Ga0134075_10233165	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300014745\|Ga0157377_11586959	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_65_10	524	Open in IMG/M
3300015241\|Ga0137418_11021268	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	596	Open in IMG/M
3300015264\|Ga0137403_11029392	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300015359\|Ga0134085_10423424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	600	Open in IMG/M
3300015371\|Ga0132258_11059559	All Organisms → cellular organisms → Bacteria	2050	Open in IMG/M
3300015373\|Ga0132257_102119200	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	727	Open in IMG/M
3300017654\|Ga0134069_1388865	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300018468\|Ga0066662_12217168	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300018482\|Ga0066669_10854082	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	810	Open in IMG/M
3300025325\|Ga0209341_10411487	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1094	Open in IMG/M
3300025939\|Ga0207665_10264398	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300026307\|Ga0209469_1070356	All Organisms → cellular organisms → Bacteria	1065	Open in IMG/M
3300026309\|Ga0209055_1182632	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	648	Open in IMG/M
3300026324\|Ga0209470_1036219	All Organisms → cellular organisms → Bacteria	2482	Open in IMG/M
3300026342\|Ga0209057_1036241	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2513	Open in IMG/M
3300026536\|Ga0209058_1173044	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300026540\|Ga0209376_1063983	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2037	Open in IMG/M
3300026540\|Ga0209376_1073175	All Organisms → cellular organisms → Bacteria	1853	Open in IMG/M
3300027748\|Ga0209689_1018291	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4397	Open in IMG/M
3300027748\|Ga0209689_1149845	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1122	Open in IMG/M
3300027873\|Ga0209814_10321211	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300031720\|Ga0307469_10652868	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300031720\|Ga0307469_12137167	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_13_65_10	545	Open in IMG/M
3300032180\|Ga0307471_100038021	All Organisms → cellular organisms → Bacteria	3816	Open in IMG/M
3300032180\|Ga0307471_100252049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1818	Open in IMG/M
3300032180\|Ga0307471_102624665	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	638	Open in IMG/M
3300032205\|Ga0307472_101841461	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	602	Open in IMG/M
3300033004\|Ga0335084_10613581	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300033551\|Ga0247830_10972483	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.41%
Host-Associated	Host-Associated	8.59%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.41%
Plants	Host-Associated → Plants	8.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.25%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.34%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.59%
Loam	Environmental → Terrestrial → Soil → Loam	7.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	45.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.91%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.78%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.78%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	39.06%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.25%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012388	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012404	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_104592971	3300002908	Grasslands Soil	ARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGAFVMTLRKQATAQDAGPTGDPEAAAR*
Ga0062590_1025733262	3300004157	Soil	VLARDADGRRIRSRPLRLPEPVIEEGSSAAYDADGALVMTFRKQATAEDAGSAGDPEAAAR*
Ga0066674_100158245	3300005166	Soil	VLARDAEGRAIRSQPLRLPAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPTGDPEAAAR*
Ga0066674_102086041	3300005166	Soil	SVEVRFAGRKAVVLARDAEGRAIRSQPLRLPAAVVEEGSSADYDNDGALLVTLPKQATARDAGPTGDPHAATR*
Ga0066672_102050342	3300005167	Soil	VLARDAEGRAIRSQPLRLTAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPTGDPEAAAR*
Ga0066677_108350051	3300005171	Soil	ARDAEGRAIRSQPLRLPDPVVEEGARADYVADGTLVMTLRKQAAAPDAGPTGNPEAAAR*
Ga0066683_100773201	3300005172	Soil	PGSVEVRFAGRKAAVLARDAEGRAIRSQPLRLPAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPTGDPEAAAR*
Ga0066683_105203111	3300005172	Soil	PGSVEVRFAGRKAAVLARDAEGRAIRSQPLRLPAPVVEEGASPDYDTEGALVITLRKQATAQDAGPTGDAKAAAR*
Ga0066680_101289673	3300005174	Soil	VLARDAEGRAIRSQPLRLPAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPTGDPEAAA
Ga0066680_102581093	3300005174	Soil	GDVEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDGEAAAR*
Ga0066673_100748341	3300005175	Soil	VRLRIQASGDVEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPAAVLEEGSSADYDTDGALLLTLRKHATAQDAGPTGDPHATAR*
Ga0066690_110325361	3300005177	Soil	VLARDAEGRAIRSQPLRLPDPVVEEGARADYVADGTLVMTLRKQAAAPDAGPTG
Ga0066688_103751821	3300005178	Soil	RFAGRKAVVLARDAEGRAIRSQPLRLPARVVEEGSSADYDAEGALVITLLKQPTAQHAGPTGEAQAAAR*
Ga0066684_106561931	3300005179	Soil	EVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDGEAAAR*
Ga0066685_100925446	3300005180	Soil	ARDAEGRAIRSQPLRLPAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPTGDPEAAAR*
Ga0066676_100497851	3300005186	Soil	PGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYYADGALVVTLRKQATAQDAGPTGDPEAAPR*
Ga0066676_101034094	3300005186	Soil	PGSVEVRFAGRKAAVLARDAEGRAIRSQPLRLPAPVVEEGASPDYDTEGALVMTLRKQATAQDAGPTGDAKAAAR*
Ga0066676_101154963	3300005186	Soil	VEVRFAGRKAVVLARDAEGRAIRSQPLRLTAPVVEEGSSADYDADGALVLTLRKQATAQDAGPTGDAEAAAR*
Ga0066388_1086893091	3300005332	Tropical Forest Soil	DVEPGSVEVRLAGRNAVVRARDAAGRPIRSGPLDLPAPVVEEGASADYDADGVFVLTLPKQAIAR*
Ga0070708_1009183921	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VEVQFAGRKTVVLARDGAGRPLRSRLLRLPEPVVEEEASAGYDADGALVMTLPKQATAAGRTDDPEPAAR*
Ga0066686_104342141	3300005446	Soil	ARDAEGRAIRSQPLRLPAPVVEEGLSADYDADGALVITFLKPATAQDAGPTADADAAAR*
Ga0066686_111359192	3300005446	Soil	IQASGDVEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLTAPVVEEGSSADYDADGALVLTLRKQATAQDAGPTGDAEAAAR*
Ga0066689_101579964	3300005447	Soil	GRKAVVLARDAAGRAIRSQPLRLPEPVVEAGSSAAYSADGALVVTLRKQATAQDAGPPGDPEAAAR*
Ga0066689_104184231	3300005447	Soil	VVLARDAEGRAIRSQPLRLPARVVEGGSSADYDAEGALVITLLKQATAQDAGPTSKAQAAR*
Ga0066689_108604292	3300005447	Soil	RIQASGDVEPGSVEVRFAGRKAVVLARDAEGQAIRSQPLRLPAPVVEEGSSADYDADGALVITLLKQATAQDAGPTGDAEAAAR*
Ga0066682_102582121	3300005450	Soil	RKAVVLARDAEGRAIRSQPLRLPAAVLEEGSSADYDTDGALLLTLRKHATAQDARPTADPHATAR*
Ga0066681_108886821	3300005451	Soil	ARDAEGRAIRSQPLRLPEPVVEEGSSADYYADGALVVTLRKQATAQDAGPTGDPEAAPR*
Ga0070697_1002959393	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	DAMGRPIRSQPLRLPEPVVEEGASADYEGDGTLVMTLRKQATARDAGRMGDPETAAR*
Ga0068853_1021064311	3300005539	Corn Rhizosphere	RETVVLARDAKGRRIRSQPLRLPEPVVEEGSSAGYDADGVLVVTLRKQAITRDARPTGDPDAAAR*
Ga0066697_106915551	3300005540	Soil	DVEPGSVEVRFAGRKAVVLARDAEGQAIRSQPLRLPAPVVEEGSSADYDADGALVITLLKQATAQDAGPTGDAEAAAR*
Ga0066701_102034432	3300005552	Soil	RFAGRKAVVLARDAEGRAIRSQPLRLPARVVAEGSSADYDAEGALVITLLKQATAQDAGPTSKAQAAR*
Ga0066701_107341172	3300005552	Soil	EPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDGEAAAR*
Ga0066707_100529225	3300005556	Soil	DAEGRAIRSQPLRLPEPVVEEGSSADYYADGALVVTLRKQATAQDAGPTGDPEAAPR*
Ga0066707_103889881	3300005556	Soil	RFAGRKAVVLARDAEGRAIRSQPLRLPARVVEEGSSADYDAEGALVITLLKQATAQHAGPTGEAQAAAR*
Ga0066704_103347181	3300005557	Soil	RFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGAFVMTLRKQATAQDAGPTGDPEAAAR*
Ga0066698_108231462	3300005558	Soil	RFAGRKAVVLARDAEGRAIRSQPLRLPARVVEEGSSADYDAEGALVITLLKQATAQDAGPTGEAQAAARRQ*
Ga0066700_101849571	3300005559	Soil	VLARDAEGRAIRSQPLRLPDPVVEEGARADYVADGTLVMTLRKQAAAPDAGPTGNPEAAAR*
Ga0066700_108946301	3300005559	Soil	VVLARDAEGRAIRSQPLRLTAPVVEEGSSADYDADGALVITLLKPATARDAGPKGDPEAAAR*
Ga0066699_101943521	3300005561	Soil	EVRFAGHKTVVVARDAEGRAIHSQSLHLPGPVTEEGSSADYDADGALVMTLRKQPTAHAAAPTDDPEAAVR*
Ga0066705_109499751	3300005569	Soil	QASGDVEPGSVEVRFAGRKAAVLARDAEGRAIRSQPLRLPAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPTGDPEAAAR*
Ga0066694_101582931	3300005574	Soil	RKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDAEAAAR*
Ga0066691_101519263	3300005586	Soil	VLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGAFVMTLRKQATAQDAGPTGDPEAAAR*
Ga0066691_109001952	3300005586	Soil	RFAGRKAVVLARDAEGRAIRSQPLRLTAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPTGDAETAAR*
Ga0066706_112033501	3300005598	Soil	GDVEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDAEAAAR*
Ga0066696_100847364	3300006032	Soil	GDVEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYYADGALVVTLRKQATAQDAGPTGDPEAAPR*
Ga0066656_106374561	3300006034	Soil	RAIRSQPLRLPEPVVEEGSSADYYADGALVVTLRKQATAQDAGPTGDPEAAPR*
Ga0066656_110690222	3300006034	Soil	VEVRFAGRKAVVLARDAEGRAIRSQPLRLTAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPTGDPEAAAR*
Ga0070715_107369571	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	EPGSLEVRFAGRKTVVLARDVAGRPIRSHALRLPELVLEEGSSADYDTDGTLVMTLRKQTAAEDAGPADDVATDAR*
Ga0070712_1013693571	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VEVRFAGRETVVLARDADGRRIRSRPLRLPEPVIEEGSSAAYDADGALVMTFRKEAGPMGDPDAAPR*
Ga0066659_102829484	3300006797	Soil	AVVLARDAEGRAIRSQPLRLTAPVVEEGSSADYDADGALVITLLKPATARDAGPKGDPEAAAR*
Ga0066659_113758371	3300006797	Soil	VVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGTFVMTLRKQATAQDAGPTGDPEAAAR*
Ga0075425_1017012552	3300006854	Populus Rhizosphere	VLARDADGRRIRSRPLRLPGPVTDEGSSAAYDADGALVMTFRKEAGPMGDPDAAPR*
Ga0075434_1005956541	3300006871	Populus Rhizosphere	VEPGSVEVRFAGRKTVVLARDVAGRPIRSRALPLPELVLEEGSSADYDTDGTLVMTLRKQTAAEDAGPADDVATDAR*
Ga0075429_1019298052	3300006880	Populus Rhizosphere	PIRSQLLHLPEPVVEEGASADYDSDGALVMTLRKQTTAQDAGRMGDPETAAR*
Ga0075419_113070631	3300006969	Populus Rhizosphere	TMGRPIRSQLLHLPEPVVEEGASADYDSDGALVMTLRKQTTAQDAGRMGDPETAAR*
Ga0099791_101035844	3300007255	Vadose Zone Soil	MQASGEVKSGSVEVKFAGRKAVVLARDAEDRAIRSEPLRLPAPVVEEGSSADYDADGALVITLRKWATARDAGATGDAEAAAR*
Ga0066710_1007055031	3300009012	Grasslands Soil	GRKAVVLARDAEGRAIRSQPLRLPAAVLEEGSSADYDTDGALLLTLRKHATAQDARPTADPHATAR
Ga0066710_1029733111	3300009012	Grasslands Soil	PDAVRLRIQASGDVEPGSVEVRFAGRKAAVLARDAEGRAIHSQPLRLPAPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDAEAAAR
Ga0066710_1048943252	3300009012	Grasslands Soil	LHIQASGDVEPGSVEVRFAGRKAVMLARDAEGRAIRSQPLRLPAPVVEEGSSADYDADGALVITLRKRATAQDAGPTGDPQAAAR
Ga0099830_108851851	3300009088	Vadose Zone Soil	GRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGALVMTLRKQATAQGAGPTGDPEAAAR*
Ga0099830_117339511	3300009088	Vadose Zone Soil	VRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDTDGALVMTLRKQATAQDAGLTGDPEAAAR*
Ga0099828_107160841	3300009089	Vadose Zone Soil	GDVEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDTDGALVMTLRKQATAQDAGLTGDPEAAAR*
Ga0099827_102641543	3300009090	Vadose Zone Soil	LGDVEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGAFVMTLRKQATAQDAGPTGDPEAAAR*
Ga0066709_1031749651	3300009137	Grasslands Soil	EPGSVEVRFAGRKAAVLARDAEGRAIRSQPLRLPAPVVEEGASPDYDTEGALVITLRKQATAQDAGPTGDAKAAAR*
Ga0105242_120204502	3300009176	Miscanthus Rhizosphere	SVEVQFADRETVVLARDAKGRRIRSQPLRLPEPVVEEGSSAGYDADGILVVTLRKQAITQDARPTGNPDAAAR*
Ga0134070_100460421	3300010301	Grasslands Soil	PGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPAAVLEEGSSADYDTDGALLLTLRKHATAQDAGPTGAPHATAR*
Ga0134070_101735001	3300010301	Grasslands Soil	RFAGRQAVVLARDAEGRTIRSQPLRLPAPVVEEGSSADYDADGALVMTFRKLATAQDAGPMGDPEAAAR*
Ga0134088_103905912	3300010304	Grasslands Soil	VELGSVEVRFAGRKAVVLARDAEGRTIRSQPLRLPDPVVEEGSSADYDADGALVMTFRKLATAQDAGPMGDPEAAAR*
Ga0134064_103267532	3300010325	Grasslands Soil	QASGDVEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDAEAAAR*
Ga0134065_101016741	3300010326	Grasslands Soil	GSVEVRFAGRQAVVLARDAEGRTIRSQPLRLPAPVVEEGSSADYDADGARVVTLRKQATAQDAGPPGDPEAAAR*
Ga0134111_103405092	3300010329	Grasslands Soil	RRDVEPGSVEVRFAGRKVVVLARDTEGRPVRSRALRLRERVIEEGPTAEYDTDDALVVTLRKQVAAGDLRRPPRPLSATR*
Ga0134080_101765681	3300010333	Grasslands Soil	AEGRAIRSQPLRLPEPVVEEGSSAAYSADGALVVTLRKQATVQDAGPPGDPEAAAR*
Ga0134080_101829632	3300010333	Grasslands Soil	GSVEVRFAGRKAAVLARDAEGRAIRSQPLRLPAPVVEEGASPDYDTEGALVITLRKQATAQDAGPTGDAKAAAR*
Ga0134062_100489684	3300010337	Grasslands Soil	ASGDIEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPAAVLEEGSSADYDTDGALLLTLRKHATAQDARPTADPHATAR*
Ga0134062_105846092	3300010337	Grasslands Soil	VRFAGRKAAVLARDAEGRAIRSQPLRLPAPVVEEGASPDYDTEGALVITLRKQATAQDAGPTGDAKAAAR*
Ga0105239_136353811	3300010375	Corn Rhizosphere	FSGRKMVVLARDAEGRPIRSQSLRLPEPVVEEGSSAGYDADGVLVVTLRKQAITQDARPTGNPDAAVR*
Ga0137392_105032473	3300011269	Vadose Zone Soil	EVRFAGRKAVVLAHDAEGRAIRSQPLRLPAPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDAEAAAR*
Ga0137391_100749595	3300011270	Vadose Zone Soil	EVRFAGRKAVVLARDAEGRAIRSQPLRLTAPVLEEGSSADYDADGALVMTLRKQATAQGAGPTGDPEAAAR*
Ga0137393_104309382	3300011271	Vadose Zone Soil	ASGDVEPESVEVRFAGRKAVVLAHDAEGRAIRSQPLRLPAPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDAEAAAR*
Ga0137389_102576881	3300012096	Vadose Zone Soil	RAIRSQPLRLPEPVVEEGSSADYDTDGALVMTLRKQATAQDAGLTGDPEAAAR*
Ga0137388_118424671	3300012189	Vadose Zone Soil	GRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGALVMTLRKQATAQHAGPTSDREAAAR*
Ga0137388_119623032	3300012189	Vadose Zone Soil	VVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDTDGALVMTLRKQATARHAGPTGNREAVAR*
Ga0137363_101444032	3300012202	Vadose Zone Soil	EPGSVEVRFAGRKAVVLAHDAEGRAIRSQPLRLPAPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDAEAAAR*
Ga0137363_105608303	3300012202	Vadose Zone Soil	RDAEGRAIRSQTLRLPAPVVEEGSSADYDVDGALVITLRKQATAQDAGPTGDPEAAAR*
Ga0137371_104937823	3300012356	Vadose Zone Soil	AEGRAIRSQPLRLTAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPTGDPEAAAR*
Ga0134042_11553171	3300012373	Grasslands Soil	RDAEGRAIRSQPLRLPAAVLEEGSSADYDTDGALLLTLRKHATAQDARPTADPHATAR*
Ga0134031_12541131	3300012388	Grasslands Soil	RKAVVLARDAEGRAIRSQPLRLPARVVEEGSSADYDTDGALLLTLRKHATAQDAGPTGAPHATAR*
Ga0134024_12660701	3300012404	Grasslands Soil	DAVRLRIQASGDVEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPAAVLEEGSSADYDTDGALLLTLRKHATAQDAGPTGDPHATAR*
Ga0137394_101273893	3300012922	Vadose Zone Soil	VRIQASGDVEPGSVEVRFAGRKAVVLARDAEGQAIRSQPLRLPAPVVEEGSSADYDADGALVITLLKRATAQDAGPTGDAEAAAR*
Ga0137359_108840262	3300012923	Vadose Zone Soil	GDVEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLTAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPTGDPEAAAR*
Ga0137419_104207681	3300012925	Vadose Zone Soil	VLARDAEGRAIRSQPLRRPDPVVEGARADCVADGTLVMTLRKQAAAPDAGPTGNPEAAAR
Ga0137416_103916461	3300012927	Vadose Zone Soil	VRIQASGDVEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLHLPAPVVEEGSSADYDADGALVITLLKQATAQDAGPTGDVEAAAR*
Ga0164299_112898112	3300012958	Soil	VEVRFAGRKAVVLARDAGGRAIRSRPLRLPLPVVEEGSAADYDADGLLVVTLRKQPAAGDAGPSGDSEASAR*
Ga0134077_102420482	3300012972	Grasslands Soil	EGRAIRSQPLRLPEPVVEEGSSADYYADGALVVTLRKQATAQDAGPTGDPEAAPR*
Ga0134110_100076141	3300012975	Grasslands Soil	EPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYYADGALVVTLRKQATAQDAGPTGDPEAAPR*
Ga0164309_116777052	3300012984	Soil	MVVLARDAEGRPIRSQSLRLPEPVVEEGSSAEYDADGALVMTLRKQATAARPTREPEAAVR*
Ga0134075_101128603	3300014154	Grasslands Soil	GDVEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYYADGALVVTLRKQATAQDAGPTGDPEAARR*
Ga0134075_102331651	3300014154	Grasslands Soil	VLARDAEGRAIRSQPPRLPAPVVEEESSADYDADGALVMTLLKQN
Ga0157377_115869591	3300014745	Miscanthus Rhizosphere	GRRIRSQPLRLPEPVVEEGSSAGYDADGVLVVTLRKQAIAQDARPTGNPDAAAR*
Ga0137418_110212682	3300015241	Vadose Zone Soil	PGSVEVRFAGRKAVVLGRDAEGRAIRSQPLRLPEPVVEEGSSADYYADGALVVTLRKQATAQDAGPTGDPEAAAR*
Ga0137403_110293921	3300015264	Vadose Zone Soil	VEVRFAGRKAVVLARDAEGRAIHSQPLRLTAPVVEEGSSADYEADGALVMTLRKHATAQDGGPTGDPEAAAR*
Ga0134085_104234242	3300015359	Grasslands Soil	EPGSVEVRFAGRKAAVLARDAEGRAIRSQPLRLPAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPTGDAEAAAR*
Ga0132258_110595594	3300015371	Arabidopsis Rhizosphere	VEVRFAGRETVVLARDADGRRIRSRPLRLPEPVIEEGSSAAYDADGALVMTFRKQATAEDAGSAGDPEAAAR*
Ga0132257_1021192002	3300015373	Arabidopsis Rhizosphere	DGRRIRSRPLRLPEPVIEEGSSAAYDADGALVMTFRKQATAEDAGSAGDPEAAAR*
Ga0134069_13888651	3300017654	Grasslands Soil	IQASGDVEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLTAPVVEEGSSADYDADGALVLTLRKQATAQDAGPTGDAEAAAR
Ga0066655_104505091	3300018431	Grasslands Soil	VLARDAEGRAIRSQPLRLPDPVVEEGARADYVADGTLVMTLRKQAAAPDAGPMGNPEAAA
Ga0066662_122171681	3300018468	Grasslands Soil	VLARDAEGRAIHSQPLRLPAPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDAEAAA
Ga0066669_108540821	3300018482	Grasslands Soil	EPGSVEVRFAGRKAAVLARDAEGRAIRSQPLRLPAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPTGDPEAAAR
Ga0209341_104114873	3300025325	Soil	AVVLARNAEGRAIRSQPLRLPEPVVEEGSSADYYADGALVVTLRKQATAQDAGPTGDPEAPAR
Ga0207665_102643983	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VEVRFAGRKTVVLARDVAGRPIRSRALRLPELVLEEGSSADYDTDGTLVMTLRRQTAAEDAGPADDVATDAR
Ga0209469_10703562	3300026307	Soil	VEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDAEAAAR
Ga0209055_11826321	3300026309	Soil	VVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDGEAAAR
Ga0209470_10362196	3300026324	Soil	FAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYYADGALVVTLRKQATAQDAGPTGDPEAAPR
Ga0209057_10362411	3300026342	Soil	VEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDGEAAAR
Ga0209058_11730442	3300026536	Soil	IEPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPAAVLEEGSSADYDTDGALLLTLRKHATAQDARPTADPHATAR
Ga0209376_10639831	3300026540	Soil	ARDAEGRAIRSQPLRLPAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPTGDPEAAAR
Ga0209376_10731751	3300026540	Soil	EPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPAAVVEEGSSADYDNDGALLVTLPKQATARDAGPTGDPHAATR
Ga0209689_10182915	3300027748	Soil	VLARDAEGRAIRSQPLRLPAPVVEEGSSADYDADGALVMTLRKQNTAQDAGPT
Ga0209689_11498453	3300027748	Soil	EPGSVEVRFAGRKAVVLARDAEGRAIRSQPLRLPEPVVEEGSSADYDADGALVITLRKQATAQDAGPTGDGEAAAR
Ga0209814_103212112	3300027873	Populus Rhizosphere	IQASGDVEPGSVEVRFAGRKTVVLARDTMGRPIRSQLLHLPEPVVEEGASADYDSDGALVMTLRKQTTAQDAGRMGDPETAAR
Ga0307469_106528682	3300031720	Hardwood Forest Soil	KMVVLARDAEGRPIRSQSLRLSEPVVEEGSTAEYDADGALVMTLRKQATAARPTSEPDAAVR
Ga0307469_121371671	3300031720	Hardwood Forest Soil	ETVVLARDAKGRRIRSQRLRLPEAVVEEGSSAGYDADGVLVVTLRKQAIAQDARPTGNPDAAAR
Ga0307471_1000380211	3300032180	Hardwood Forest Soil	IQASGDVEPGSVEVRFAGRKAVVLARDAEGQAIRSQPLRLPAPVVEEGSSADYDADGALVITLLKRATAQDAGPTGDAEAAAR
Ga0307471_1002520494	3300032180	Hardwood Forest Soil	EPGSVQVRFAGRKTVVLARDADGRQIRSQPLRLPEPVVEEGSSADYDADGALVMTLRKQAPAQDAGPTGDPEAAAR
Ga0307471_1026246652	3300032180	Hardwood Forest Soil	ASRDVEPGSVEVRFAGRKTVVLARDADGRPIRSQLLRLPVLVVEEGSSAGYDADGALVVTLRKQATNQGAGPTDDPEAPAR
Ga0307472_1018414611	3300032205	Hardwood Forest Soil	AGRKTVVLARDTDGRPIRSQPLRLPQPVVEEGSSADYDADGALVMTLPKQATAQGAGPTDDSEAAAR
Ga0335084_106135812	3300033004	Soil	MVVLARDAEGRRIRSQSLRLSEPVVEEGSSAEYDADGALVMTLRKQAPAARPTSEPEATA
Ga0247830_109724832	3300033551	Soil	TVVLARDAMGRPIRSQLLRLPEPVVEEGASADYDSDGALVMTLRKLSTVQDAGRMGDPETAAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065149

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences