Metagenome Family F065153

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065153
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	51 residues
Representative Sequence	MNMHIEVQKLEPSSAPAKPGLLRRILAFLARVLSSPKGDQGGWEGGARGL
Number of Associated Samples	53
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.40 %
% of genes near scaffold ends (potentially truncated)	37.50 %
% of genes from short scaffolds (< 2000 bps)	81.25 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.250 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (35.938 % of family members)
Environment Ontology (ENVO)	Unclassified (64.844 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.688 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.36% β-sheet: 0.00% Coil/Unstructured: 75.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01925	TauE	11.72
PF07690	MFS_1	5.47
PF00196	GerE	2.34
PF04392	ABC_sub_bind	1.56
PF00589	Phage_integrase	1.56
PF01921	tRNA-synt_1f	1.56
PF01970	TctA	1.56
PF07883	Cupin_2	1.56
PF03466	LysR_substrate	1.56
PF14294	DUF4372	0.78
PF00732	GMC_oxred_N	0.78
PF03779	SPW	0.78
PF14237	GYF_2	0.78
PF15919	HicB_lk_antitox	0.78
PF01609	DDE_Tnp_1	0.78
PF02371	Transposase_20	0.78
PF00890	FAD_binding_2	0.78
PF10067	DUF2306	0.78
PF13414	TPR_11	0.78
PF00239	Resolvase	0.78
PF13745	Obsolete Pfam Family	0.78
PF04519	Bactofilin	0.78
PF12697	Abhydrolase_6	0.78
PF05973	Gp49	0.78
PF16694	Cytochrome_P460	0.78
PF13492	GAF_3	0.78
PF13185	GAF_2	0.78
PF02515	CoA_transf_3	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	11.72
COG1384	Lysyl-tRNA synthetase, class I	Translation, ribosomal structure and biogenesis [J]	1.56
COG1784	TctA family transporter	General function prediction only [R]	1.56
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.56
COG3333	TctA family transporter	General function prediction only [R]	1.56
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.78
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.78
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.78
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.78
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.78
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.78
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.78
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.78
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.78
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.78
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.78
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.78
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.66 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	37.50 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.31 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.69 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	3.12 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	8.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.12 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.34 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Pseudorhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes	8.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.12 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.78 %
Caballeronia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
unclassified Pseudorhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes	8.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.12 %
Caballeronia telluris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia telluris	0.78 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Pseudorhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	8.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.69 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3.12 %
Caballeronia telluris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia telluris	0.78 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100357645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	966	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100418984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	1093	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104846929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	744	Open in IMG/M
3300004633\|Ga0066395_10277888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	908	Open in IMG/M
3300004633\|Ga0066395_10335922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	836	Open in IMG/M
3300005332\|Ga0066388_100083939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3574	Open in IMG/M
3300005332\|Ga0066388_100091692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3464	Open in IMG/M
3300005332\|Ga0066388_100330641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2170	Open in IMG/M
3300005332\|Ga0066388_100353949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2115	Open in IMG/M
3300005332\|Ga0066388_100771455	Not Available	1558	Open in IMG/M
3300005332\|Ga0066388_101632372	Not Available	1136	Open in IMG/M
3300005332\|Ga0066388_101739265	Not Available	1105	Open in IMG/M
3300005332\|Ga0066388_102438009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	950	Open in IMG/M
3300005332\|Ga0066388_102672430	Not Available	910	Open in IMG/M
3300005332\|Ga0066388_102724062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	902	Open in IMG/M
3300005332\|Ga0066388_102877532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	880	Open in IMG/M
3300005332\|Ga0066388_103846316	Not Available	766	Open in IMG/M
3300005332\|Ga0066388_107890503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	533	Open in IMG/M
3300005434\|Ga0070709_10535763	Not Available	894	Open in IMG/M
3300005434\|Ga0070709_11251079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	598	Open in IMG/M
3300005713\|Ga0066905_100460557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1048	Open in IMG/M
3300005713\|Ga0066905_101484040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	617	Open in IMG/M
3300005713\|Ga0066905_101666979	Not Available	585	Open in IMG/M
3300005713\|Ga0066905_101748377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	572	Open in IMG/M
3300005713\|Ga0066905_101959206	Not Available	543	Open in IMG/M
3300005713\|Ga0066905_102333867	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300005764\|Ga0066903_100024531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6585	Open in IMG/M
3300005764\|Ga0066903_100149175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3353	Open in IMG/M
3300005764\|Ga0066903_100163592	All Organisms → cellular organisms → Bacteria	3233	Open in IMG/M
3300005764\|Ga0066903_100285645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2592	Open in IMG/M
3300005764\|Ga0066903_100827388	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300005764\|Ga0066903_101259191	Not Available	1378	Open in IMG/M
3300005764\|Ga0066903_101617931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1229	Open in IMG/M
3300005764\|Ga0066903_103255978	Not Available	878	Open in IMG/M
3300005764\|Ga0066903_103792060	Not Available	812	Open in IMG/M
3300005764\|Ga0066903_104690065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	728	Open in IMG/M
3300005764\|Ga0066903_107819184	Not Available	550	Open in IMG/M
3300005764\|Ga0066903_107995754	Not Available	542	Open in IMG/M
3300006163\|Ga0070715_10670026	Not Available	616	Open in IMG/M
3300006173\|Ga0070716_100613711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	820	Open in IMG/M
3300006173\|Ga0070716_101117277	Not Available	629	Open in IMG/M
3300006175\|Ga0070712_100643441	Not Available	900	Open in IMG/M
3300006854\|Ga0075425_100001423	All Organisms → cellular organisms → Bacteria → Proteobacteria	23538	Open in IMG/M
3300006854\|Ga0075425_100001564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	22469	Open in IMG/M
3300006871\|Ga0075434_100362693	All Organisms → cellular organisms → Bacteria → Proteobacteria	1470	Open in IMG/M
3300007076\|Ga0075435_100017134	All Organisms → cellular organisms → Bacteria → Proteobacteria	5476	Open in IMG/M
3300009792\|Ga0126374_10099457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1646	Open in IMG/M
3300009792\|Ga0126374_10180142	Not Available	1315	Open in IMG/M
3300009792\|Ga0126374_10877064	Not Available	693	Open in IMG/M
3300010043\|Ga0126380_10027325	Not Available	2834	Open in IMG/M
3300010043\|Ga0126380_10524628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	915	Open in IMG/M
3300010043\|Ga0126380_11632984	Not Available	576	Open in IMG/M
3300010046\|Ga0126384_10010735	All Organisms → cellular organisms → Bacteria → Proteobacteria	5691	Open in IMG/M
3300010046\|Ga0126384_10137021	Not Available	1867	Open in IMG/M
3300010046\|Ga0126384_10145274	All Organisms → cellular organisms → Bacteria → Proteobacteria	1819	Open in IMG/M
3300010046\|Ga0126384_10318224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1286	Open in IMG/M
3300010046\|Ga0126384_11234829	Not Available	691	Open in IMG/M
3300010047\|Ga0126382_10065801	All Organisms → cellular organisms → Bacteria	2198	Open in IMG/M
3300010047\|Ga0126382_10132552	Not Available	1675	Open in IMG/M
3300010047\|Ga0126382_10444559	Not Available	1025	Open in IMG/M
3300010047\|Ga0126382_11488298	Not Available	622	Open in IMG/M
3300010358\|Ga0126370_10024397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3536	Open in IMG/M
3300010358\|Ga0126370_10380836	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300010358\|Ga0126370_10395925	All Organisms → cellular organisms → Bacteria	1133	Open in IMG/M
3300010358\|Ga0126370_10733272	Not Available	872	Open in IMG/M
3300010358\|Ga0126370_11104371	Not Available	731	Open in IMG/M
3300010359\|Ga0126376_10572671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1062	Open in IMG/M
3300010359\|Ga0126376_10830269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	906	Open in IMG/M
3300010360\|Ga0126372_11480878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	714	Open in IMG/M
3300010361\|Ga0126378_10607107	Not Available	1208	Open in IMG/M
3300010361\|Ga0126378_12835403	Not Available	553	Open in IMG/M
3300010362\|Ga0126377_10592104	All Organisms → cellular organisms → Bacteria → Proteobacteria	1153	Open in IMG/M
3300010362\|Ga0126377_11327249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	791	Open in IMG/M
3300010362\|Ga0126377_11728721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	701	Open in IMG/M
3300010366\|Ga0126379_10622792	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300010366\|Ga0126379_11832537	Not Available	710	Open in IMG/M
3300010366\|Ga0126379_11838508	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300010366\|Ga0126379_11912905	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300010376\|Ga0126381_101356615	Not Available	1028	Open in IMG/M
3300010376\|Ga0126381_102694283	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300010376\|Ga0126381_102731396	Not Available	705	Open in IMG/M
3300010376\|Ga0126381_103723813	Not Available	596	Open in IMG/M
3300010398\|Ga0126383_10233815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1790	Open in IMG/M
3300010398\|Ga0126383_10793817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1029	Open in IMG/M
3300010398\|Ga0126383_11097571	Not Available	885	Open in IMG/M
3300012948\|Ga0126375_11028376	Not Available	673	Open in IMG/M
3300012948\|Ga0126375_11549297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	569	Open in IMG/M
3300012948\|Ga0126375_11878342	Not Available	525	Open in IMG/M
3300012971\|Ga0126369_12462753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	606	Open in IMG/M
3300015371\|Ga0132258_10230063	All Organisms → cellular organisms → Bacteria	4516	Open in IMG/M
3300015371\|Ga0132258_11076317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2032	Open in IMG/M
3300015372\|Ga0132256_101538922	Not Available	776	Open in IMG/M
3300016294\|Ga0182041_11491020	Not Available	622	Open in IMG/M
3300016341\|Ga0182035_10864876	Not Available	796	Open in IMG/M
3300016387\|Ga0182040_10668555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	846	Open in IMG/M
3300016387\|Ga0182040_11954336	Not Available	503	Open in IMG/M
3300016422\|Ga0182039_10089875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia telluris	2235	Open in IMG/M
3300016422\|Ga0182039_10635927	Not Available	936	Open in IMG/M
3300016445\|Ga0182038_11466182	Not Available	612	Open in IMG/M
3300021168\|Ga0210406_10286433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1343	Open in IMG/M
3300021478\|Ga0210402_10861602	Not Available	832	Open in IMG/M
3300021560\|Ga0126371_10702216	Not Available	1159	Open in IMG/M
3300021560\|Ga0126371_11325636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	853	Open in IMG/M
3300027874\|Ga0209465_10026756	All Organisms → cellular organisms → Bacteria → Proteobacteria	2695	Open in IMG/M
3300031543\|Ga0318516_10019904	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	3413	Open in IMG/M
3300031546\|Ga0318538_10323370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	832	Open in IMG/M
3300031546\|Ga0318538_10447129	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300031573\|Ga0310915_10628655	Not Available	760	Open in IMG/M
3300031680\|Ga0318574_10054366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2117	Open in IMG/M
3300031719\|Ga0306917_10447419	Not Available	1012	Open in IMG/M
3300031719\|Ga0306917_10531769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	924	Open in IMG/M
3300031744\|Ga0306918_11138033	Not Available	604	Open in IMG/M
3300031770\|Ga0318521_10615824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	657	Open in IMG/M
3300031781\|Ga0318547_10814136	Not Available	582	Open in IMG/M
3300031833\|Ga0310917_10793034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	640	Open in IMG/M
3300031879\|Ga0306919_10115563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1913	Open in IMG/M
3300031910\|Ga0306923_10763432	Not Available	1071	Open in IMG/M
3300031945\|Ga0310913_10817440	Not Available	657	Open in IMG/M
3300031945\|Ga0310913_10946546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	605	Open in IMG/M
3300031959\|Ga0318530_10412371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.	560	Open in IMG/M
3300032076\|Ga0306924_12334114	Not Available	541	Open in IMG/M
3300032261\|Ga0306920_100482754	Not Available	1840	Open in IMG/M
3300032261\|Ga0306920_101512502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	958	Open in IMG/M
3300033158\|Ga0335077_10710652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1034	Open in IMG/M
3300033158\|Ga0335077_11941297	Not Available	548	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.53%
Host-Associated	Host-Associated	5.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.53%
Plants	Host-Associated → Plants	5.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.91%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.56%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.94%
Loam	Environmental → Terrestrial → Soil → Loam	32.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.12%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	27.34%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.34%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	35.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	27.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.56%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1003576452	3300000364	Soil	MNMHIEVQKLEPSAEPAKPGILRRILAFLARVLSSPRGDHGGWEGGARGL*
INPhiseqgaiiFebDRAFT_1004189842	3300000364	Soil	MNMHVAVREFEPSPAPAKAGILRRILAFLANVLASPKGDQGGWEGGARGL*
INPhiseqgaiiFebDRAFT_1048469291	3300000364	Soil	MNMHVGTQQLEASSAPPTKTGLLPWMLAFLAKVLASPKGDQGGWEGGARGL*
Ga0066395_102778882	3300004633	Tropical Forest Soil	MNVHVEARQLEPSSPPAKAGLLQRMLAFLAKVLASPKGNQGGWEAGARGL*
Ga0066395_103359222	3300004633	Tropical Forest Soil	MNMHVEARQLEPSGAPAKAGLLQRMLAFLAKVLASPKGNQ
Ga0066388_1000839393	3300005332	Tropical Forest Soil	MNMHIELQKLEPSSARAKPGLLRQILAFLARVLSSPKGDQGGWEGGARGL*
Ga0066388_1000916924	3300005332	Tropical Forest Soil	MNMHIGAQEVERPSAPAKPGLLRRILAFLARVLSSPKGDQGGWEGGARGL*
Ga0066388_1003306413	3300005332	Tropical Forest Soil	MNMHVEVRQLEPSGAPAKAGLLQRMLAFLAKVLASPKGNQSGWEAGARGL*
Ga0066388_1003539492	3300005332	Tropical Forest Soil	MLARPVEENAAMNMHVGMRKLAPAPAKAGFLRRILAFLARLLASPKGDQGGWEGGARGL*
Ga0066388_1007714552	3300005332	Tropical Forest Soil	MRHAICREGAAMNMHIEVRELEQSAAAKPGLLRRLLAFLAKVLASPKGDHGGWEGGARGL
Ga0066388_1016323721	3300005332	Tropical Forest Soil	FWHVHCCEGAAMNMHMEVRGLEPSTAPAKPGLLRRILAFLATVLSSPKGDQGGWESGARGL*
Ga0066388_1017392652	3300005332	Tropical Forest Soil	MNMHVEVKKLEPSSTPAKPGLLRRILAFLAKVLSSPKGDQGGWEGGARGL*
Ga0066388_1024380091	3300005332	Tropical Forest Soil	CGSMLTKSLEEHAAMNMHVGAQQLEPSGAPAKAGLVRRMLTFLAKVLASPKGNQGGWEGGARGL*
Ga0066388_1026724302	3300005332	Tropical Forest Soil	MNMHVDVQKLEPSAEPAKPGLLRRILAFLASVLSSPKGDQGGWEGGARGL*
Ga0066388_1027240621	3300005332	Tropical Forest Soil	MNMHVEARQLEPSGAPAKAGLLQRMLAFLAKVLASPKGNQSGWEAGARGL*
Ga0066388_1028775321	3300005332	Tropical Forest Soil	CGSMLTKSLEEHAAMNMHVGAQQLEPSSAPAKAGLWRRMLAFLAKVLASRKGNQGGWEAGARGL*
Ga0066388_1038463162	3300005332	Tropical Forest Soil	MNMQVVVRKLEPSAAPAQGGLLRRMLAFFAKLLASPNGDQGGWEGGARGL*
Ga0066388_1078905032	3300005332	Tropical Forest Soil	MNMHVGAWQLEPSSAPAQAGLLRRILAFLAEVLASPKGNQGGWEAGARGL*
Ga0070709_105357631	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNMHIEVQKLEPSAEPAKPGILRRILAFIARVLSSPKGDHGGWEGGARGL*
Ga0070709_112510792	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSMHIEVRELESSAAAKPGLLRRLLALLAKVLVPPPKGDQGGWEGGARGL*
Ga0066905_1004605572	3300005713	Tropical Forest Soil	MNMQVAVRKFEPSAAPAKGGLLRRMLAFLAKVLASPNGDQGGWEGGARGL*
Ga0066905_1014840402	3300005713	Tropical Forest Soil	MNMHVEARQLEPSVAPAKAGLLQRMLAFLAKVLASPKGNQSGWEAGARGL*
Ga0066905_1016669792	3300005713	Tropical Forest Soil	MNMHTDIQKLEPSSPPAKPGLLRRILTYLAKLLASPPKGDQGGWEGGARGL*
Ga0066905_1017483771	3300005713	Tropical Forest Soil	MNMHVGAQQLEPSSVPAKAGLLRRMLAFLAKVLSSPKGNQGGWEGGARGL*
Ga0066905_1019592061	3300005713	Tropical Forest Soil	MNMRIEVRRLEPSPAPAKPGLLRRILAFLATVLSSPKGDQGGWEGGARGL*
Ga0066905_1023338671	3300005713	Tropical Forest Soil	AAMNKHVGVREFEPSPAPAKAGILRRILAFLAKVLASPKGDQGGWEGGARGL*
Ga0066903_1000245312	3300005764	Tropical Forest Soil	MNMHVGIREFAPSPAPAKAGILRRMLAFLARLLASPKGDQGGWEGGARGL*
Ga0066903_1001491756	3300005764	Tropical Forest Soil	MNMHIEIQKLEPSGEPAKPGILRQILAFLARVLSSPKGDHGGWEGGARGL*
Ga0066903_1001635924	3300005764	Tropical Forest Soil	MQARHFEKDAAREIHIGVRELEPSSAPAKRGLLRRILAFLAKVLSSPKGDQGGWEGGARGL*
Ga0066903_1002856452	3300005764	Tropical Forest Soil	MNMHVDVQKLEPSPEPAKPDLLRRFLAFLARVLSSPKCDQGGWEGGARGF*
Ga0066903_1003729851	3300005764	Tropical Forest Soil	AKAGFLRRMLAFLARLLASPKGYQGGWEGGARGL*
Ga0066903_1008273882	3300005764	Tropical Forest Soil	MNMHIGAQEVERSSSPAKPGLLRRILAFLARVLSSPKGDQGGWEGGARGL*
Ga0066903_1012591911	3300005764	Tropical Forest Soil	MNMHTDIQKLEPSSPPAKPGLLRRILTYLAKLLASSPKGDQGGWEGGARGL*
Ga0066903_1016179312	3300005764	Tropical Forest Soil	MNMHVELQKLESSSVPAKQGLLRRILAFIAKMLAAPPKGDQGGWDGGARGL*
Ga0066903_1032559782	3300005764	Tropical Forest Soil	MNIHVEVQKPEPSSAPAKAGLLRRILAFLAKVLSSPKGDQGGWEGGARGL*
Ga0066903_1037920603	3300005764	Tropical Forest Soil	MNKHIEIREFAPSPAPAKPSLLRRILAFLAKVLSSPKGDQGGWEGGARGL*
Ga0066903_1046900652	3300005764	Tropical Forest Soil	MNMHVGAQQLEPSSVPAKAGLLRRMLAFLAEVLSSPKGNQGGWEAGARGL*
Ga0066903_1078191841	3300005764	Tropical Forest Soil	MNMHVEARQLEPSSSPAKAGLLQRMLAFLAKVLASPKGNQ
Ga0066903_1079957541	3300005764	Tropical Forest Soil	MNMHVGSRVFEPPPVKVGFLRRMLAFLAQLLASPKGYQGGWEGGARGL
Ga0070715_106700262	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MNKHIEIREFAPSPAPAKQGLLRRILAFLAKVLSSPKGDQGGWEGGARGL*
Ga0070716_1006137112	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSMHIEVRELEPSAAAKPGLLRRLLALLAKVLVPPPKGDQGGWEG
Ga0070716_1011172771	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MNKHVGVRDFETSPASTKVGMLRRILAFLAKVLASPKGGWEGGARGL*
Ga0070712_1006434412	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSMHIEVRELEPSAAAKPGLLRRLLALLAKVLVPPPKGDQGGWEGGARGL*
Ga0075425_10000142312	3300006854	Populus Rhizosphere	MNIHIEVQKLEPSAEPAKPGILRRILAFLARVLSSPRGDHGGWEGGARGL*
Ga0075425_1000015642	3300006854	Populus Rhizosphere	MNMHVGTQQLEASSTPPAKTGLLPWMLAFLAKVLASPKGDQGGWEGGARGL*
Ga0075434_1003626933	3300006871	Populus Rhizosphere	MNKHVGVREFEPSPAPAKAGILRRLLAFLAKVLASPKGDQGGWEGGARGL*
Ga0075435_1000171341	3300007076	Populus Rhizosphere	RAQAMNIHIEVQKLEPSAEPAKPGILRRILAFLARVLSSPRGDHGGWEGGARGL*
Ga0126374_100994574	3300009792	Tropical Forest Soil	MLTKSLEEHAAMNMHVGAQQLEPSGAPAKAGLVRRMLTFLAKVLASPKGNQGGWEGGARGL*
Ga0126374_101801422	3300009792	Tropical Forest Soil	MNTHIEVRELETSSAPAKSGLMRRILAFLRKLFASSPKGDQGGWEGGARGL*
Ga0126374_108770643	3300009792	Tropical Forest Soil	KLEPSPEPAKPDLLRRFLAFLARVLSSPKCDQGGWEGGARGF*
Ga0126380_100273253	3300010043	Tropical Forest Soil	MNMHIEVRELEQSAAAKPGLLRRLLAFLAKVLASPKGDHGGWEGGARGL*
Ga0126380_105246281	3300010043	Tropical Forest Soil	FLEEGAAMNMHIGAPEVERSSAPAKPGLLRRILAFLAKVLSSPKGDQGGWEGGARGL*
Ga0126380_116329842	3300010043	Tropical Forest Soil	MLARAFLEEGAAMNMHIGAPEVERSSAPAKSGLLRRILAFLARVLSSPKGDQGGWEGG
Ga0126384_100107353	3300010046	Tropical Forest Soil	MQATLFEKDAAMNKHVGVRDFEPSPAPARAGILRRLLAFLAKVLASPKGDQGGWEGGARGL*
Ga0126384_101370212	3300010046	Tropical Forest Soil	MNMHIEVQKLEPSSAPAKPGLLRRILAFLARVLSSPKGDQGGWEGGARGL*
Ga0126384_101452742	3300010046	Tropical Forest Soil	MNMHVDVREFEPSSAKVGFLQRMLAFLAQLLASPKGYQGGWEGGARGL*
Ga0126384_103182242	3300010046	Tropical Forest Soil	MLARLVEEDAAMNMHVGIREFAPSPAPAKAGILRRMLAFLARLLASPKGDQGGWEGGARGL*
Ga0126384_112348291	3300010046	Tropical Forest Soil	MNMHVGARQLEPSSAPAQAGLLRRILAFLAEVLASPKGNQGGWEAGARGL*
Ga0126382_100658012	3300010047	Tropical Forest Soil	MNMHIEVRELEPSTAPAKPGLVRRMLAFLARVLSSPKGDQGGWESGARGL*
Ga0126382_101325522	3300010047	Tropical Forest Soil	MNKHVGVRDFEPSPAPARAGILRRLLAFLAKVLASPKGDQGGWEGGARGL*
Ga0126382_104445591	3300010047	Tropical Forest Soil	MNMHIEFRGLEPSTAPAKPGILRRILAFIARVLSSPKGDQGGWEGGARGL*
Ga0126382_114882982	3300010047	Tropical Forest Soil	MNMHVEVQKLEPSSSPAKPGLLRRILAFLARALSSPKGDQGGWEGGARGL*
Ga0126370_100243972	3300010358	Tropical Forest Soil	MNMHVGVREFEPSRAKAGFLRRMLAFLARLLASPKGYQGGWEGGARGL*
Ga0126370_103808361	3300010358	Tropical Forest Soil	MNMHVELQKFEPSAEPAKPGLLRRILAFFARVLSSPKGDQGGWEGGTRGL*
Ga0126370_103959253	3300010358	Tropical Forest Soil	LEEDAAMNMHIGAQEVERPSAPAKPGLLRRILAFLARVLSSPKGDQGGWEGGARGL*
Ga0126370_107332722	3300010358	Tropical Forest Soil	MDAAMNMHVGVREFEPSPAKAGFLRRMLAFLAQLLASPKGYQGGWEGGARGL*
Ga0126370_111043713	3300010358	Tropical Forest Soil	DVQKLEPSPEPAKPDLLRRFLAFLARVLSSPKCDQGGWEGGARGF*
Ga0126376_100426441	3300010359	Tropical Forest Soil	MNIHIGVRELEPSSAPTKRGLLRRILAFLAKVLSSPKGDQGG
Ga0126376_105726712	3300010359	Tropical Forest Soil	MNMHVGVREFEPSPAKAGFLRRMLAFLAQLLASPKGYQGGWEGGARGL*
Ga0126376_108302692	3300010359	Tropical Forest Soil	MLTKSLEEHAAMNMHVGAQQLEPSGAPAKAGLVRRMLTFLAMVLASPKGNQGGWEGGARGL*
Ga0126372_114808781	3300010360	Tropical Forest Soil	MNMHVGVREFEPSRAKAGFLRRMLAFLARLLASPKGYQGGWEG
Ga0126378_106071073	3300010361	Tropical Forest Soil	MNMHIGGREFEPSSAPTKPNLLRRILAFLAKLLASPKGDQGGWEGGARGL*
Ga0126378_128354031	3300010361	Tropical Forest Soil	ELEQSAAAKPGLLRRLLAFLAKVLASSKGDHGGWEGGARGL*
Ga0126377_105921041	3300010362	Tropical Forest Soil	GQHAGNRYFEKNAAMNKHVGVREFEPSPAPAKAGILRRILAFLAKVLASPKGDQGGWEGGARGL*
Ga0126377_113272491	3300010362	Tropical Forest Soil	YPISEMDAAMNMHVGVREFEPSPAKAGFLRRMLAFLAQLLASPKGYQGGWEGGARGL*
Ga0126377_117287212	3300010362	Tropical Forest Soil	MNMHVGAQQLEPSGAPAKAGLVRRMLTFLAKVLASPKGNQGGWEGGARGL*
Ga0126379_106227924	3300010366	Tropical Forest Soil	CCEGAAMNMHIEAQKLESSSPPAKRGLLRRILAFLAKVLSSPKGDQGGWEGGARGL*
Ga0126379_118325373	3300010366	Tropical Forest Soil	MNMHVDVQKLEPSPEPAKPDLLRRFLAFLARVLSSPKCDQGKWEG
Ga0126379_118385082	3300010366	Tropical Forest Soil	MQATLFEKDAAMNKHVGVRDFKPSPAPARAGILRRLLAFLAKVLASPKGDQGGWEGGARGL*
Ga0126379_119129051	3300010366	Tropical Forest Soil	MNMHVDVQKLEPSAEPAKPGLLRRILAFLASVLSSPKGDQG
Ga0126381_1013566151	3300010376	Tropical Forest Soil	MNMHVDVQKLEPSAEPAKPGLLRRILAFLASVLSSPKGDQGGWEGG
Ga0126381_1026942831	3300010376	Tropical Forest Soil	MNMHIGAQEVERPSAPAKPGLLRRILAFLAKVLSSPKGDQGGWEGGARGL*
Ga0126381_1027313962	3300010376	Tropical Forest Soil	AGRGAAMNMHVDVQKLEPSPEPAKPDLLRRFLAFLARVLSSPKCDQGGWEGGARGF*
Ga0126381_1037238132	3300010376	Tropical Forest Soil	DIQKLEPSVEPAKPGILQRMLAFLTELLSSPKGDQGGWEGGARGL*
Ga0126383_102338152	3300010398	Tropical Forest Soil	MQATLFEKDAAMNKHVGVRDFEPSPAPARAGILRRLLAFLANVLASPKGDQGGWEGGARGL*
Ga0126383_107938172	3300010398	Tropical Forest Soil	MNMHVGAQQLEPSSVPAKAGLLRRMLAFLAKVLSSPKGNQGGWEAGARGL*
Ga0126383_110975711	3300010398	Tropical Forest Soil	LEEDAAMNMHIGAQEVERSSSPAKPGLLRRILAFLARVLSSPKGDQGGWEGGARGL*
Ga0126375_110283761	3300012948	Tropical Forest Soil	MNKHVGVRDFEPSPAPARAGILRRLLAFLANVLASPKGDQGGWE
Ga0126375_115492972	3300012948	Tropical Forest Soil	MNMHVGARQLEPSSAPAQAGLLRRILAFLAKVLSSPKGDQGGWEGGARGL*
Ga0126375_118783421	3300012948	Tropical Forest Soil	LLGEDVAMNKHIEIREFAPAPAPAKPGLLRRILAFLAKVLSSPKGDQGGWEGGARGL
Ga0126369_124627531	3300012971	Tropical Forest Soil	MLTKSLEEHAAMNMQVVVRKLEPSAAPAQGGLLRRMLAFFAKLLASPNGDQGGWEGGARGL*
Ga0132258_102300636	3300015371	Arabidopsis Rhizosphere	MNMHIHIGARELEQSSGPAQSGPLQRFLAFIAKLLASPKGDQGGWEGGARGL*
Ga0132258_110763174	3300015371	Arabidopsis Rhizosphere	HCWEDAAMNMHVELQKLEPSSAPAKPGLLRRILTYIAKLLASPKGDQDQGGWEGGARGL*
Ga0132256_1015389221	3300015372	Arabidopsis Rhizosphere	MLGTSIIRRGAAMNMHIHIRARQLDQSSGPAQSGPLQRFLAFIAKLLASPKGDQGGWEGGARGL*
Ga0182041_114910201	3300016294	Soil	MNMHVGARQFEPPSAPARAGLLRRIMAFLAKVLASPKGDQGGWEGG
Ga0182035_108648761	3300016341	Soil	KHIEIREFAPSPAPAKPGLLRRILAFLAKVLSSPKGDQGGWEGGARGL
Ga0182040_106685551	3300016387	Soil	MNMHVGARQFEPPSAPAKAGLLRRIMAFLAKVLASPKGDQG
Ga0182040_119543362	3300016387	Soil	MNIHVEVQKPEPSSAPAKAGLLRRILAFLAKVLSSPKGDQGGWEGGARGL
Ga0182039_100898751	3300016422	Soil	MNMHVGARQFEPPSAPARAGLLRRIMAFLAKVLASPKGDQGGWEGGARG
Ga0182039_106359271	3300016422	Soil	MNMHIEIQKLEPPSAPAKPGLFRRILAFIARVLSSPKGD
Ga0182038_114661822	3300016445	Soil	MNMHVDVQKLETLVEPAKPGVLRRILAFIARVLSAP
Ga0210406_102864332	3300021168	Soil	MSMHIEVRELEPSAAAKPGLLRRLLALLAKVLVPPPKGDQGGWEGGARGL
Ga0210402_108616021	3300021478	Soil	MSMHIEVRELESSAAAKPGLLRRLLALLAKVLVPPPKGDQGGWEGGARGL
Ga0126371_107022162	3300021560	Tropical Forest Soil	MNMHIEVRELEQSAAAKPGLLRRLLAFLAKLLASPKGDQGGWEGGARGL
Ga0126371_113256362	3300021560	Tropical Forest Soil	MLPRRVEEDAAMNMHVGIREFAPSPAPAKAGILRRMLAFLARLLASPKGDQGGWEGGARG
Ga0209465_100267562	3300027874	Tropical Forest Soil	MNVHVEARQLEPSSPPAKAGLLQRMLAFLAKVLASPKGNQGGWEAGARGL
Ga0318516_100199043	3300031543	Soil	MNMHVGARQFEPPSAPAKAGPLRRMVAFLAKVLASPKGDQGGWEGGARGL
Ga0318538_103233702	3300031546	Soil	NMHVGARQFEPPSAPAKAGLLRRIMAFLAKVLASPKGDQGGWEGGARGL
Ga0318538_104471291	3300031546	Soil	MHVGVREFEPSPAKAGFLRRMLAFLAQLLASPKGYQGGWEGGARGL
Ga0310915_106286551	3300031573	Soil	MNMHVGVREFEPSPAKAGFLRRMLAFLAQLLASPKGYQGGWEGGARGL
Ga0318574_100543662	3300031680	Soil	MNMHVGARQFEPPSAPAKPGLLRRIMAFLAKVLASPKGDQGGWEGGARGL
Ga0306917_104474191	3300031719	Soil	MNMHIEVQKLEPSSAPAKAGFLRRILAYLAKLLASPKGDQGGWEGGARGL
Ga0306917_105317691	3300031719	Soil	SLEEHAAMNMHVGARQFEPPSAPARAGLLRRIMAFLAKVLASPKGDQGGWEGGARGL
Ga0306918_111380332	3300031744	Soil	MNMHVEARQFEPPSAPAKAGLLRRMMAFLAKVLASPKGDQGGWEGGARGL
Ga0318521_106158242	3300031770	Soil	FEPPSAPARAGLLRRIMAFLAKVLASPKGDQGGWEGGARGL
Ga0318547_108141362	3300031781	Soil	MNMHIEVQKLEPSSAPAKAGLLRRILAYLAKLLASPKGDQGGWEGGARGL
Ga0310917_107930342	3300031833	Soil	MNMHVGARQFEPPSAPAKAGLLRRIMAFLAKVLASPKGDQGGWEGGARGL
Ga0306919_101155632	3300031879	Soil	MNMHVGARQFEPPSAPARAGLLRRIMAFLAKVLASPKGDQGGWEGGARGL
Ga0306923_104802142	3300031910	Soil	REFEPSPAKAGFLRRMLAFLAQLLASPKGYQGGWEGGARGL
Ga0306923_107634322	3300031910	Soil	MNKHIEIREFAPSPAPAKPGLLRRILAFLAKVLSSPKGDQGGWEGGARGL
Ga0310913_108174402	3300031945	Soil	DFWHVRCCEGAAMNMHIEVQKLEPSSAPAKAGLLRRILAYLAKLLASPKGDQGGWEGGARGL
Ga0310913_109465461	3300031945	Soil	VGARQFEPPSAPAKPGLLRRIMAFLAKVLASPKGDQGGWEGGARGL
Ga0318530_104123712	3300031959	Soil	PRSQRSANRCGSLLTTSLEEHAAMNMHVGARQFEPPSAPAKPGLLRRIMAFLAKVLASPKGDQGGWEGGARGL
Ga0306924_123341142	3300032076	Soil	MNIHVEVQKPEPSSAPAKAGLLRRILAFLAKVLSSPTGDQGRVGRRRAG
Ga0306920_1004827543	3300032261	Soil	MNMHIEVQKLEPSSAPAKAGLLRRILAYLAKLLASP
Ga0306920_1015125021	3300032261	Soil	MNMHVGARQFEPPSAPAKAGPLRRMVAFLAKVLASPKGDQGGWEGGAR
Ga0335077_107106522	3300033158	Soil	GTRQFEPSHTPVAAAKAGLLRRMLAFLAKVLASPNGDQGGWEGGARGL
Ga0335077_119412972	3300033158	Soil	HVDCWEDAAMNMHVEVQKLEPSSAPAERGLLRRILAFLAKVLSSPKGDQGGWEGGARGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065153

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences