Metagenome Family F065157

Basic Information
Family ID	F065157
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	47 residues
Representative Sequence	LTPQLEMASVRRTAAQPMTFEGVVNRKPVTLLPIGRVAHEYYTTYFQMI
Number of Associated Samples	106
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.66 %
% of genes from short scaffolds (< 2000 bps)	90.62 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (52.344 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.469 % of family members)
Environment Ontology (ENVO)	Unclassified (21.875 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.094 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.06% β-sheet: 12.99% Coil/Unstructured: 51.95%
Feature Viewer

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Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF01636	APH	35.16
PF07690	MFS_1	7.03
PF00202	Aminotran_3	4.69
PF00392	GntR	3.12
PF07282	OrfB_Zn_ribbon	2.34
PF12833	HTH_18	2.34
PF07944	Glyco_hydro_127	1.56
PF04149	DUF397	0.78
PF06029	AlkA_N	0.78
PF10935	DUF2637	0.78
PF13274	DUF4065	0.78
PF00293	NUDIX	0.78
PF09365	DUF2461	0.78
PF12680	SnoaL_2	0.78
PF13784	Fic_N	0.78
PF00480	ROK	0.78
PF00589	Phage_integrase	0.78
PF00440	TetR_N	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	1.56
COG3533	Beta-L-arabinofuranosidase, GH127 family	Carbohydrate transport and metabolism [G]	1.56
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.78

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.34 %
Unclassified	root	N/A	47.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	32.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.03 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.12 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.53 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.34 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.34 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.56 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.56 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.34 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.56 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.78 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.66 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.34 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.56 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.78 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.78 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.78 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y02GZLNR	Not Available	640	Open in IMG/M
3300001867\|JGI12627J18819_10319552	Not Available	626	Open in IMG/M
3300003218\|JGI26339J46600_10037675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1341	Open in IMG/M
3300005327\|Ga0070658_10732558	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005434\|Ga0070709_11811110	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005435\|Ga0070714_100727052	Not Available	959	Open in IMG/M
3300005437\|Ga0070710_10200205	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300005440\|Ga0070705_101729876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300005466\|Ga0070685_10043521	All Organisms → cellular organisms → Bacteria	2567	Open in IMG/M
3300005566\|Ga0066693_10292673	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300005921\|Ga0070766_11110012	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300006028\|Ga0070717_10476688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1126	Open in IMG/M
3300006031\|Ga0066651_10491656	Not Available	650	Open in IMG/M
3300006163\|Ga0070715_10590276	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300006175\|Ga0070712_100271586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1362	Open in IMG/M
3300006354\|Ga0075021_10983852	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300006755\|Ga0079222_10256295	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300006796\|Ga0066665_10719992	Not Available	790	Open in IMG/M
3300006804\|Ga0079221_10655227	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300009148\|Ga0105243_10170747	All Organisms → cellular organisms → Bacteria → Proteobacteria	1883	Open in IMG/M
3300009523\|Ga0116221_1408339	Not Available	591	Open in IMG/M
3300009545\|Ga0105237_11545662	Not Available	670	Open in IMG/M
3300009553\|Ga0105249_10202658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1942	Open in IMG/M
3300009672\|Ga0116215_1091755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1362	Open in IMG/M
3300009672\|Ga0116215_1212031	Not Available	852	Open in IMG/M
3300009672\|Ga0116215_1543680	Not Available	502	Open in IMG/M
3300009700\|Ga0116217_10134765	All Organisms → cellular organisms → Bacteria → Proteobacteria	1661	Open in IMG/M
3300009700\|Ga0116217_10554450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	718	Open in IMG/M
3300010341\|Ga0074045_10248689	Not Available	1176	Open in IMG/M
3300010361\|Ga0126378_11284845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300010373\|Ga0134128_10387649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1560	Open in IMG/M
3300010379\|Ga0136449_100057388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8608	Open in IMG/M
3300010379\|Ga0136449_100065099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7911	Open in IMG/M
3300010379\|Ga0136449_100150667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4564	Open in IMG/M
3300010379\|Ga0136449_101162040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1220	Open in IMG/M
3300010379\|Ga0136449_103223808	Not Available	630	Open in IMG/M
3300010400\|Ga0134122_11751399	Not Available	651	Open in IMG/M
3300010400\|Ga0134122_12298967	Not Available	585	Open in IMG/M
3300011270\|Ga0137391_10453600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1090	Open in IMG/M
3300012202\|Ga0137363_10238661	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1474	Open in IMG/M
3300012203\|Ga0137399_10531566	Not Available	987	Open in IMG/M
3300012210\|Ga0137378_10534484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1080	Open in IMG/M
3300012210\|Ga0137378_10911595	Not Available	792	Open in IMG/M
3300012500\|Ga0157314_1058674	Not Available	510	Open in IMG/M
3300013104\|Ga0157370_11229509	Not Available	676	Open in IMG/M
3300015374\|Ga0132255_104084492	Not Available	619	Open in IMG/M
3300016387\|Ga0182040_10937430	Not Available	719	Open in IMG/M
3300017993\|Ga0187823_10261812	Not Available	589	Open in IMG/M
3300018060\|Ga0187765_10454062	Not Available	802	Open in IMG/M
3300020581\|Ga0210399_11100808	Not Available	636	Open in IMG/M
3300020582\|Ga0210395_10562913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	857	Open in IMG/M
3300020582\|Ga0210395_11276374	Not Available	538	Open in IMG/M
3300021178\|Ga0210408_10030399	All Organisms → cellular organisms → Bacteria	4275	Open in IMG/M
3300021180\|Ga0210396_11066543	Not Available	682	Open in IMG/M
3300021181\|Ga0210388_11261664	Not Available	625	Open in IMG/M
3300021388\|Ga0213875_10288413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	775	Open in IMG/M
3300021407\|Ga0210383_10276175	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300021407\|Ga0210383_10312822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1352	Open in IMG/M
3300021432\|Ga0210384_10333892	All Organisms → cellular organisms → Bacteria	1365	Open in IMG/M
3300021432\|Ga0210384_11082811	Not Available	704	Open in IMG/M
3300021444\|Ga0213878_10330791	Not Available	657	Open in IMG/M
3300021474\|Ga0210390_11145379	Not Available	630	Open in IMG/M
3300021478\|Ga0210402_10747109	Not Available	902	Open in IMG/M
3300024219\|Ga0247665_1025866	Not Available	749	Open in IMG/M
3300024325\|Ga0247678_1069496	Not Available	582	Open in IMG/M
3300025885\|Ga0207653_10010746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2856	Open in IMG/M
3300025898\|Ga0207692_10805962	Not Available	614	Open in IMG/M
3300025906\|Ga0207699_11380321	Not Available	521	Open in IMG/M
3300025907\|Ga0207645_10768603	Not Available	655	Open in IMG/M
3300025915\|Ga0207693_10052864	All Organisms → cellular organisms → Bacteria	3186	Open in IMG/M
3300025921\|Ga0207652_10532670	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300025928\|Ga0207700_10410238	Not Available	1188	Open in IMG/M
3300025929\|Ga0207664_10760033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	872	Open in IMG/M
3300025944\|Ga0207661_10669544	Not Available	954	Open in IMG/M
3300026374\|Ga0257146_1044437	Not Available	720	Open in IMG/M
3300027064\|Ga0208724_1025133	Not Available	603	Open in IMG/M
3300027604\|Ga0208324_1162687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	604	Open in IMG/M
3300027812\|Ga0209656_10070807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1901	Open in IMG/M
3300027894\|Ga0209068_10809292	Not Available	552	Open in IMG/M
3300028138\|Ga0247684_1051293	Not Available	667	Open in IMG/M
3300028881\|Ga0307277_10021092	All Organisms → cellular organisms → Bacteria → Proteobacteria	2552	Open in IMG/M
3300030494\|Ga0310037_10102851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1323	Open in IMG/M
3300030494\|Ga0310037_10189694	Not Available	916	Open in IMG/M
3300031543\|Ga0318516_10720622	Not Available	566	Open in IMG/M
3300031682\|Ga0318560_10766665	Not Available	521	Open in IMG/M
3300031715\|Ga0307476_11100083	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031719\|Ga0306917_10314362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1212	Open in IMG/M
3300031724\|Ga0318500_10244002	Not Available	870	Open in IMG/M
3300031744\|Ga0306918_10940010	Not Available	673	Open in IMG/M
3300031747\|Ga0318502_10212126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1122	Open in IMG/M
3300031748\|Ga0318492_10610064	Not Available	582	Open in IMG/M
3300031765\|Ga0318554_10563261	Not Available	643	Open in IMG/M
3300031771\|Ga0318546_10707079	Not Available	709	Open in IMG/M
3300031779\|Ga0318566_10154908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1136	Open in IMG/M
3300031781\|Ga0318547_10127852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1478	Open in IMG/M
3300031781\|Ga0318547_10472959	Not Available	773	Open in IMG/M
3300031796\|Ga0318576_10165939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1033	Open in IMG/M
3300031805\|Ga0318497_10495437	Not Available	684	Open in IMG/M
3300031805\|Ga0318497_10568372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	636	Open in IMG/M
3300031819\|Ga0318568_10758332	Not Available	602	Open in IMG/M
3300031823\|Ga0307478_11215750	Not Available	628	Open in IMG/M
3300031831\|Ga0318564_10522545	Not Available	514	Open in IMG/M
3300031845\|Ga0318511_10477839	Not Available	576	Open in IMG/M
3300031912\|Ga0306921_10724757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1141	Open in IMG/M
3300031938\|Ga0308175_100198944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1972	Open in IMG/M
3300031996\|Ga0308176_10299945	All Organisms → cellular organisms → Bacteria → Proteobacteria	1565	Open in IMG/M
3300032009\|Ga0318563_10210332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1049	Open in IMG/M
3300032043\|Ga0318556_10238271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	949	Open in IMG/M
3300032044\|Ga0318558_10050100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1844	Open in IMG/M
3300032067\|Ga0318524_10460721	Not Available	665	Open in IMG/M
3300032068\|Ga0318553_10106458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1433	Open in IMG/M
3300032089\|Ga0318525_10301218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	823	Open in IMG/M
3300032094\|Ga0318540_10172076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1041	Open in IMG/M
3300032160\|Ga0311301_10025926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15782	Open in IMG/M
3300032160\|Ga0311301_10145621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4314	Open in IMG/M
3300032160\|Ga0311301_10349519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2314	Open in IMG/M
3300032160\|Ga0311301_11133884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1012	Open in IMG/M
3300032160\|Ga0311301_12102000	Not Available	653	Open in IMG/M
3300032160\|Ga0311301_12910126	Not Available	518	Open in IMG/M
3300032261\|Ga0306920_102330328	Not Available	741	Open in IMG/M
3300032770\|Ga0335085_12074632	Not Available	575	Open in IMG/M
3300032805\|Ga0335078_10298796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2166	Open in IMG/M
3300032828\|Ga0335080_10681179	Not Available	1073	Open in IMG/M
3300032828\|Ga0335080_11261765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	740	Open in IMG/M
3300032892\|Ga0335081_10331652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1994	Open in IMG/M
3300033134\|Ga0335073_11029892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	848	Open in IMG/M
3300033134\|Ga0335073_11822027	Not Available	567	Open in IMG/M
3300033158\|Ga0335077_11028543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	819	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.19%
Host-Associated	Host-Associated	7.03%
Engineered	Engineered	0.78%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.28%
Plants	Host-Associated → Plants	7.03%
Aquatic	Environmental → Aquatic	3.91%
Solid Waste	Engineered → Solid Waste	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.69%
Freshwater	Environmental → Aquatic → Freshwater	2.34%
Sediment	Environmental → Aquatic → Sediment	1.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.56%
Roots	Host-Associated → Plants → Roots	0.78%
Grass	Engineered → Solid Waste → Grass	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.62%
Loam	Environmental → Terrestrial → Soil → Loam	14.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.78%
Composting	Engineered → Solid Waste → Grass → Composting	0.78%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	35.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.12%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.34%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.78%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.78%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.47%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	15.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.59%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.25%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.91%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.34%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.56%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.56%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.56%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.56%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.78%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.78%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.78%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.78%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.78%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.78%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.78%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012500	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.old.080610	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017993	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024219	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK06	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_01953140	2170459021	Switchgrass, Maize And Mischanthus Litter	MASVRRTAAQPMTFEGVVDRKPVPLLPIGRVAHEYYTTYFQMI
JGI12627J18819_103195522	3300001867	Forest Soil	SGVHGTDPGSLTPQLEMASVRRTAAQPMTFEGVVNRKPATLLPIGRIAHEYYTTYFSMV*
JGI26339J46600_100376753	3300003218	Bog Forest Soil	SIHRTAAQPMTFEAVADRKPIKMIPIARAAHEYYTTYWQMM*
Ga0070658_107325582	3300005327	Corn Rhizosphere	MASVRRTAAQPMTFEGVVNRKPVTLLPIGRVAHEYYTTYFQMI*
Ga0070709_118111102	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MASIHRTAAQPMAFQGVVNHKPATLHPIGRIAHEYYTTYFQMA*
Ga0070714_1007270521	3300005435	Agricultural Soil	EMASIRRTAAQPITFEAVADRKPVTLIPIARAAHEYYTTYFQME*
Ga0070710_102002052	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VHGNNPGMLTPQLEMASIHRTAAQPMAFEGTVNHKPATLLPIGRVTHEYYTTYFQMM*
Ga0070705_1017298762	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	PGMLTPQLEMASIRRTATQPMAFEGVVNHKPATLLPIGRITHDYYTTYFQMV*
Ga0070685_100435213	3300005466	Switchgrass Rhizosphere	LTPQLEMASVRRTAAQPMTFEGVVNRKPVTLLPIGRVAHEYYTTYFQMI*
Ga0066693_102926731	3300005566	Soil	HGGDPGLLTPQLDMASVRRTAAQPMTFEGVVDSKPVTLLPVGRVAHEYYTTYFQMI*
Ga0070766_111100121	3300005921	Soil	SGVHGNNPSMLTPQLEMASIHRTAAQPMAFQGLVNHKPATLLPIGRVTHDYYTTYFQMA*
Ga0070717_104766881	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PLLETASVRRTAAQPMTFEAVADHKPVTLIPVARAAHEYYTTYFQMM*
Ga0066651_104916562	3300006031	Soil	RRTAAQPMTFEGVVNRKPATLRPIGRVAHEYYTTYFQMI*
Ga0070715_105902761	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	GNNPGMLTPQLEMASIHRTAAQPMAFEGTVNHKPATLLPIGRVTHEYYTTYFQMM*
Ga0070712_1002715861	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SIHRTAAQPMAFQGVVNHKPATLLPIGRIAHEYYTTYFEMV*
Ga0075021_109838521	3300006354	Watersheds	EMASIHQTAVQPMTFEAVADGKPIKMIPIARAAHEYYTTYWQMM*
Ga0079222_102562951	3300006755	Agricultural Soil	DPRLTFDAVVNRQPVTLLPIGRAAHQYYTTYFQMI*
Ga0066665_107199922	3300006796	Soil	QLEMASIHRTAAQPMAFQGVVNHKPATLLPIGRIAHEYYTTYFQMA*
Ga0079221_106552271	3300006804	Agricultural Soil	PGSLTPQLEMASVRRTATQPMTFEGVVNRKPVTLLPIGRVAHEYYTTYFQMI*
Ga0105243_101707473	3300009148	Miscanthus Rhizosphere	AQPMTFEGVVNRKPVTLLPIGRVAHEYYTTYFQMI*
Ga0116221_14083392	3300009523	Peatlands Soil	AQPMTFEGVADRKPVTMIPIARATHEYYTTYFQMV*
Ga0105237_115456622	3300009545	Corn Rhizosphere	AAQPMAFEGTVNHKPATLLPIGRVTHEYYTTYFQMT*
Ga0105249_102026583	3300009553	Switchgrass Rhizosphere	PLTPQLDMASIRRTAAQPMTFEGVVNRKPVTLAPIGRVAHEYYTTYFQMI*
Ga0116215_10917551	3300009672	Peatlands Soil	DPGTLTPQLEMASVRQTAAQPMTFEGVADRKPVTMIPIARAAHEYYTTYWQMM*
Ga0116215_12120312	3300009672	Peatlands Soil	DPGTLTPQLEMASVRQTAAQPMTFEGVADRKPVTMIPIARATHEYYTTYFQMV*
Ga0116215_15436802	3300009672	Peatlands Soil	LTPQLEMASIHRTAAQPMTFEGVADRKPVKMIPIARAAHEYYTTYWQMM*
Ga0116217_101347651	3300009700	Peatlands Soil	PQLEMASVRQTAAQPMTFEGVADRKPVKMIPIARAAHEYYTTYWQMM*
Ga0116217_105544501	3300009700	Peatlands Soil	LEMASVRQTAAQPMTFEGVADRKPVKMIPIARAAHQYYTTYWEMI*
Ga0074045_102486892	3300010341	Bog Forest Soil	QPMTFEAVVDRKPVKMIPIARAAHEYYTTYWQMM*
Ga0126378_112848451	3300010361	Tropical Forest Soil	EMASIRRTAGQPMTFEGVANHKPATLLPIGRVAHEYYTTYFQMV*
Ga0134128_103876491	3300010373	Terrestrial Soil	RTAAQPMSFQGVVNHKPATLLPIGRVTHEYYTTYFQMM*
Ga0136449_10005738810	3300010379	Peatlands Soil	MASVRQTAAQPMTFEGVADRKPVKLIPIARAAHEYYTTYWQMI*
Ga0136449_1000650991	3300010379	Peatlands Soil	ASVRQTAAQPMTFEGVADRKPVTMIPIARAAHEYYTTYWQMV*
Ga0136449_10015066711	3300010379	Peatlands Soil	MASIHQTAAQPMTFEAVADRKPIKMIPIARAAHEYYTTYWQMM*
Ga0136449_1011620401	3300010379	Peatlands Soil	IHQTAAQPMTFEAVADRKPIKMIPIARAAHEYYTTYWQMV*
Ga0136449_1032238081	3300010379	Peatlands Soil	MASVRQTAAQPMTFEGVADRKPVKMIPIARAAHEYYTTYWQMM*
Ga0134122_117513992	3300010400	Terrestrial Soil	FDPLKDKDAITRMLTPQLEVASIQRTAAQPMAFGGIVNHKPATLLPIGRVTHEYYTTYFQMI*
Ga0134122_122989671	3300010400	Terrestrial Soil	LTPQLDMASVRRTATQPMTFEGVVNRKPITLLPIGRVAHEYYTTYFQMM*
Ga0137391_104536003	3300011270	Vadose Zone Soil	AQPMTFEAVAGHKPVKLIPVARAAHEYYTTYFQMI*
Ga0137363_102386611	3300012202	Vadose Zone Soil	RRTATQPMAFEGVVNHKPATLLPIGRITHDYYTTYFQMV*
Ga0137399_105315661	3300012203	Vadose Zone Soil	PQLEMASIQRTAAQPMAFEGTVNHKPATLLPIGRVTHEYYTTYFQMA*
Ga0137378_105344843	3300012210	Vadose Zone Soil	SIRRTAAQPMTFEGVAGHKPVKLIPIARAAHQYYTTYFQMT*
Ga0137378_109115951	3300012210	Vadose Zone Soil	PGMLTPQLEMASIRRTAAQPMAFEGVVNHKPATLLPIGRITHEYYTTYFQMA*
Ga0157314_10586741	3300012500	Arabidopsis Rhizosphere	SDPGLLTPQLEMASVRRTAAEPMTFEGVVNRKPVTLLPIGRVAHEYYTTYFQMI*
Ga0157370_112295091	3300013104	Corn Rhizosphere	QRTAAQPMAFGGIVDHKPATLLPIGRVTHEYYTTYFQMA*
Ga0132255_1040844922	3300015374	Arabidopsis Rhizosphere	HGSDPGVLTPQLEMASVRRTAAQPMTFEGVVNRKPVTLLPIGRVAHEYYTTYFQMI*
Ga0182040_109374303	3300016387	Soil	VLSSVHGTDPGSLTPQLEMASIRRTATQPMTFEGIANHKPVTMRPIARVAHEYYTTYFSM
Ga0187823_102618121	3300017993	Freshwater Sediment	LSTTPTRLAAGTLTPQLEMASVRQTAAQPMTFEGVADRKPVKLIPIARAAHEYYTTYFQM
Ga0187765_104540622	3300018060	Tropical Peatland	EMASVRRTAAQPMTFEGVVNHKPITMLPIARVAHEYYTTYFSML
Ga0210399_111008082	3300020581	Soil	MASIRRTATQPMEFEGVVNHKPVTLLPIGRVAHEYYTTYFEML
Ga0210395_105629132	3300020582	Soil	LEMASIRRTAAQPMAFEGVANHKPVPLLPIGRVAHEYYTTYFEMV
Ga0210395_112763741	3300020582	Soil	IRRTAAQPMAFEGVANHKPVSLLPIGRVAHDYYTTYFQMV
Ga0210408_100303995	3300021178	Soil	AAQPMAFEGVANHKPVPLLPIGRVAHEYYTTYFQMV
Ga0210396_110665432	3300021180	Soil	GNNPGMLTPQLEMASIHRTAAQPMAFQGVVNHKPATLLPIGRIAHEYYTTYFQMA
Ga0210388_112616641	3300021181	Soil	AQPMTFEGVADRKPVKMIPIARTAHEYYTTYWQTA
Ga0213875_102884132	3300021388	Plant Roots	VLSGVYARDPGPLTPQLEMASIHRTAAQPMTFQAVSGRKPITLRPIARVAHEYYTTYFQM
Ga0210383_102761751	3300021407	Soil	GVYGSDPGSLTPQLEMASIHRTTAQPMTFEAVADRKPVKLIPVARAAHEYYTTYWQMT
Ga0210383_103128222	3300021407	Soil	AQPMTFGGVVNHQPVTLLPIARVAHEYYTTYFQMV
Ga0210384_103338921	3300021432	Soil	GNNPGMLTPQLEMASIHRTAAQPMAFQGVVNHKPATLLPIGRVTHDYYTTYFQMA
Ga0210384_110828111	3300021432	Soil	AGVHGNDPGWLTPQLEMASIHRTAAQPMAFEGVANHKPVPLLPIGRVAHEYYTTYFQMM
Ga0213878_103307912	3300021444	Bulk Soil	LEVGSVQRTAAQPMTFEGISSGKPARLIPVGRAAHEYYTTYFQAV
Ga0210390_111453792	3300021474	Soil	TPQLEMASIHQTAAQPMTFEGVADRKPVKMIPIARAAHQYYTTYWQMT
Ga0210402_107471091	3300021478	Soil	SGVHGNNPGMLTPQLEMASIHRTAAQPMAFQGVVNHKPATLLPIGRVTHEYYTTYFQMA
Ga0247665_10258662	3300024219	Soil	DMASVRRTATQPMTFEGVVNRKPVALLPIGRVAHEYYTTYFQMI
Ga0247678_10694962	3300024325	Soil	LDMASVRRTAAQPMTFEGVVNRKPVTLLPIGRVAHEYYTTYFQMM
Ga0207653_100107461	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	PLTPQLDMASVRRTAAQPMTFEGVVNRKPVTLAPIGRVAHEYYTTYFQMI
Ga0207692_108059622	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	EMASIHRTAAQPMAFQGVVNHKPATLLPIGRVTHEYYTTYFQMT
Ga0207699_113803211	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	AQPMAFQGVVNHKPATLHPIGRIAHEYYTTYFQMA
Ga0207645_107686032	3300025907	Miscanthus Rhizosphere	MASVRRTATQPMTFEGVVNRKPVTLLPIGRVAHEYYTTYFQMI
Ga0207693_100528641	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	GSLTPQLEMASIRRAAAQPMTFEAVADRKPVTLIPIARAAHEYYTTYFQME
Ga0207652_105326701	3300025921	Corn Rhizosphere	DMASVRRTATQPMTFEGVVNRKPVTLLPIGRVAHEYYTTYFQMI
Ga0207700_104102382	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	LSGVHGNNPGMLTPQLEMASIHRTAAQPMAFEGTVNHKPATLLPIGRVTHEYYTTYFQMM
Ga0207664_107600332	3300025929	Agricultural Soil	TAAQPMAFQGVVNHKPATLLPIGRIAHEYYTTYFEMV
Ga0207661_106695442	3300025944	Corn Rhizosphere	ASVRRTATQPMTFEGVVNRKPVTLLPIGRVAHEYYTTYFQMI
Ga0257146_10444371	3300026374	Soil	MLTPQLEMASIQRTAAQPMAFEGTVNHKPATLLPIGRITHEYYTTYFQMV
Ga0208724_10251331	3300027064	Forest Soil	LTPQLEMASIHQTVAQPMTFEGVADRKPVKMIPIARTAHEYYTTYWQTA
Ga0208324_11626871	3300027604	Peatlands Soil	LEMASVRQTAAQPMTFEGVADRKPVKMIPIARAAHQYYTTYWEMI
Ga0209656_100708073	3300027812	Bog Forest Soil	QLEMASIHQTATQPMTFEAVADRKPVKMIPIARAAHEYYTTYWQMM
Ga0209068_108092922	3300027894	Watersheds	EMASIHQTAVQPMTFEAVADGKPIKMIPIARAAHEYYTTYWQMM
Ga0247684_10512932	3300028138	Soil	TAAQPMTFEGVVNRKPVTLLPIGRVAHEYYTTYFQMM
Ga0307277_100210923	3300028881	Soil	SDPGLLTPQLDMASVRRTATEPMTFEGVVNRKPVTLVPIGRVAHEYYTTYFQMI
Ga0310037_101028512	3300030494	Peatlands Soil	TPQLEMASVRQTAAQPMTFEGVADRKPVKLIPIARAAHEYYTTYWQMI
Ga0310037_101896942	3300030494	Peatlands Soil	GVYGSDPGSLTPQLEMASVRQTAAQPMTFEGVADRKPVKLIPIARAAHEYYTTYWQMV
Ga0318516_107206222	3300031543	Soil	LTPQLAMTSVHRTAAQPMTFEAVADGKPVELIPIARAAQEYYTTYWQMA
Ga0318560_107666652	3300031682	Soil	AQHDGTDPGSLTPQLEMASIRRTATQPMTFEGIANHKPITMRPIARVAHEYYTTYFSMV
Ga0307476_111000832	3300031715	Hardwood Forest Soil	HGTDPGSLTPQLEMASIRRTAAQPMAFEGVVNHKPVTLLPIGRVAHEYYTTYFQMI
Ga0306917_103143623	3300031719	Soil	PQLEMASIRRTAGQPMTFEGVVNHKPATLLPIGRVAHEYYTTYFEMI
Ga0318500_102440021	3300031724	Soil	QLELASVRRTAGQPMTFEGVVNHQPVTLLPIGRIAHEYYTTYFQVV
Ga0306918_109400102	3300031744	Soil	AAQPMTFEAVAGRKPVRLIPIARAAHEYYTTYFEMV
Ga0318502_102121263	3300031747	Soil	EMASIRRTAGQPMTFEGVVNHKPATLLPIGRVAHEYYTTYFEMI
Ga0318492_106100641	3300031748	Soil	RRTATQPMTFEGIANHKPVTMRPIARVAHEYYTTYFSMV
Ga0318554_105632611	3300031765	Soil	MASIRRTATQPMTFEGIANHKPITMRPIARVAHEYYTTYFSMV
Ga0318546_107070793	3300031771	Soil	IRRTAAQPMTFEGIANHKPVTMRPIARVAHQYYTTYFSMV
Ga0318566_101549081	3300031779	Soil	SVHGTDPGSLTPQLEMASIRRTATQPMTFEGIANHKPITMRPIARVAHEYYTTYFEMI
Ga0318547_101278522	3300031781	Soil	SNPGWLTPQLEMASIRRTAGQPMTFEGVVNHKPATLLPIGRVAHEYYTTYFEMI
Ga0318547_104729591	3300031781	Soil	GSLTPQLEMASMRRTAAQPMTFEGIVNHKPITMLPIARVAHEYYTTYFSMV
Ga0318576_101659391	3300031796	Soil	LEMASIRRTAAPSMTFEAVADGKPITMKPIARAAHEYYTTYFEMI
Ga0318497_104954371	3300031805	Soil	VQPRDPGPLTPQLELASVRRTAGQPMTFEGVVNHQPVTMLPIGRIAHEYYTTYFQVV
Ga0318497_105683721	3300031805	Soil	VYPKDPGSLTPQLEMASIRRTAAPSMTFEAVADGKPITMKPIARAAHEYYTTYFEMV
Ga0318568_107583321	3300031819	Soil	ASVRRTAAQPLTFEGVVNHQPDTLLPIGRIAHEYYTTYFSMA
Ga0307478_112157502	3300031823	Hardwood Forest Soil	LEMASVRQTATQPMTFEGVVNRKPVPLLPIGRVAHEYYTTYFQMI
Ga0318564_105225451	3300031831	Soil	SVHRTAAQPMTFEAVADGKPVELIPIARAAQEYYTTYWQMA
Ga0318511_104778391	3300031845	Soil	LTPQLETASVRRTAAQPMTFEGVVNHQPVTLLPIGRIAHEYYTTYFSMA
Ga0306921_107247572	3300031912	Soil	LAMTSVHRTAAQPMTFEAVADGKPVELIPIARAAHEYYTTYWQMA
Ga0308175_1001989441	3300031938	Soil	ASVRRTAAQPMTFEGVVDRKPVTLLPIGRVAHEYYTTYFQMI
Ga0308176_102999451	3300031996	Soil	AAQPMTFEGVVDRKPVTLLPIGRVAHEYYTTYFQMI
Ga0318563_102103323	3300032009	Soil	PVVLSSVHGTDPGSLTPQLEMASIRRTATQPMTFEGIANHKPITMRPIARVAHEYYTTYFSMV
Ga0318556_102382711	3300032043	Soil	ASIRRTAGQPMTFEGVVNHKPATLLPIGRVAHEYYTTYFEMI
Ga0318558_100501001	3300032044	Soil	DPGPLTPQLELASVRRTAGQPMTFEGVVNHQPVTLLPIGRIAHEYYTTYFSMA
Ga0318524_104607211	3300032067	Soil	VSDPGSLTPQLEMASVRRTAAQPMTFEGVVNHQPVTLLPIGRIAHEYYTTYFSMA
Ga0318553_101064581	3300032068	Soil	VVLSAVNGSNPGWLTPQLEMASIRRTAGQPMTFEGVVNHKPATLLPIGRVAHEYYTTYFEMI
Ga0318525_103012182	3300032089	Soil	GWLTPQLEMASIRRTAGQPMTFEGVVNHKPATLLPIGRVAHEYYTTYFEMI
Ga0318540_101720762	3300032094	Soil	RTAGQPMTFEGVVNHKPATLLPIGRVAHEYYTTYFEMI
Ga0311301_100259261	3300032160	Peatlands Soil	SDPGTLTPQLEMASVRQTAAQPMTFEGVADRKPVTMIPIARATHEYYTTYFQMV
Ga0311301_1014562110	3300032160	Peatlands Soil	MASIHQTAAQPMTFEAVADRKPIKMIPIARAAHEYYTTYWQMM
Ga0311301_103495191	3300032160	Peatlands Soil	GTDPGSLTPQLEMASIHQTAAQPMTFEAVADRKPIKMIPIARAAHEYYTTYWQMM
Ga0311301_111338841	3300032160	Peatlands Soil	TAAQPMTFEGVADRKPVKLIPIARAAHEYYTTYWQMV
Ga0311301_121020001	3300032160	Peatlands Soil	LEMASVRQTAAQPMTFEGVADRKPVKMIPIARAAHQYYTTYWQMM
Ga0311301_129101262	3300032160	Peatlands Soil	AAQPMTFEGVADRKPVKMIPIARAAHEYYTTYWQMM
Ga0306920_1023303281	3300032261	Soil	GSLTPQLEMASIRRTAAQPMTFEGIANRKPVTMRPIARVAHEYYTTYFSMV
Ga0335085_120746321	3300032770	Soil	PGSLTPQLEMASIRRTAAQPMAFEGVVNHKPATLLPIGRAAHEYYTTYFSMT
Ga0335078_102987964	3300032805	Soil	GPVVLSAVYGSDPGPLTPQLQMASIRRTAAPSMTFEAVANHKPVKLIPIARAAHEYYTTYFQMI
Ga0335080_106811791	3300032828	Soil	GPLTPQLQMASIRRTAAPSMTFEAVANHKPVKLIPIARAAHEYYTTYFQMI
Ga0335080_112617652	3300032828	Soil	DPGSLTPQLEMASIRRTAAPSMTFEAVADGKPITMKPIARAAHEYYTTYFQMI
Ga0335081_103316521	3300032892	Soil	QLQMASIRRTAAPSMTFEAVADHKPVKLIPIARAAHEYYTTYFEMA
Ga0335073_110298921	3300033134	Soil	MASVRRTAAQPMTFEGVVNHKPVTMLPIGRVAHEYYTTYFSMV
Ga0335073_118220271	3300033134	Soil	TDPGPPTPQLDMASVRRTAAQPMTFEGVVNRKPATLLPIGRVAHEYYTTYFQMI
Ga0335077_110285431	3300033158	Soil	SGVYPKDPGSLTPQLEMSSIRRTAAPSMTFEAVADGKPITMKPIARAAHEYYTTYFQMI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065157

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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