Metagenome Family F065225

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065225
Family Type	Metagenome
Number of Sequences	128
Average Sequence Length	69 residues
Representative Sequence	MPSPRTPHDLEPDDGSGAQPRHDQAPAEPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNNPGSSINP
Number of Associated Samples	87
Number of Associated Scaffolds	128

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	84.25 %
% of genes near scaffold ends (potentially truncated)	21.09 %
% of genes from short scaffolds (< 2000 bps)	94.53 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (69.531 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (17.969 % of family members)
Environment Ontology (ENVO)	Unclassified (39.844 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.906 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.63% β-sheet: 0.00% Coil/Unstructured: 68.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 128 Family Scaffolds
PF02096	60KD_IMP	25.00
PF00005	ABC_tran	3.91
PF12893	Lumazine_bd_2	0.78
PF13601	HTH_34	0.78
PF13304	AAA_21	0.78
PF02371	Transposase_20	0.78

COG ID	Name	Functional Category	% Frequency in 128 Family Scaffolds
COG0706	Membrane protein insertase Oxa1/YidC/SpoIIIJ	Cell wall/membrane/envelope biogenesis [M]	25.00
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.78

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.53 %
All Organisms	root	All Organisms	30.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.53 %
cellular organisms	root	All Organisms → cellular organisms	30.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.53 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	30.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.53 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	27.34 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.53 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27.34 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.53 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	14.06 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.56 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.53 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	14.06 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.78 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.53 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	7.03 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.53 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	7.03 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.56 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.53 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	7.03 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	69.53 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	7.03 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.78 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.78 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.78 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0504881	Not Available	503	Open in IMG/M
3300001431\|F14TB_100761068	Not Available	604	Open in IMG/M
3300001431\|F14TB_102362047	Not Available	518	Open in IMG/M
3300001686\|C688J18823_10476703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	802	Open in IMG/M
3300002568\|C688J35102_117840633	Not Available	510	Open in IMG/M
3300002568\|C688J35102_119321925	Not Available	673	Open in IMG/M
3300002568\|C688J35102_119841328	Not Available	790	Open in IMG/M
3300002568\|C688J35102_120199407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	923	Open in IMG/M
3300002568\|C688J35102_120625863	Not Available	1260	Open in IMG/M
3300002568\|C688J35102_120698556	Not Available	1374	Open in IMG/M
3300002568\|C688J35102_120843231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1782	Open in IMG/M
3300002568\|C688J35102_120967993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3567	Open in IMG/M
3300004081\|Ga0063454_100454171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	882	Open in IMG/M
3300004081\|Ga0063454_100724368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	754	Open in IMG/M
3300004081\|Ga0063454_101160631	Not Available	636	Open in IMG/M
3300004081\|Ga0063454_101571517	Not Available	566	Open in IMG/M
3300004153\|Ga0063455_100446548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	783	Open in IMG/M
3300004463\|Ga0063356_103375290	Not Available	688	Open in IMG/M
3300004463\|Ga0063356_103448537	Not Available	681	Open in IMG/M
3300004479\|Ga0062595_100142024	Not Available	1378	Open in IMG/M
3300004479\|Ga0062595_100737057	Not Available	799	Open in IMG/M
3300005172\|Ga0066683_10669904	Not Available	619	Open in IMG/M
3300005180\|Ga0066685_10687056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	703	Open in IMG/M
3300005184\|Ga0066671_10841582	Not Available	584	Open in IMG/M
3300005338\|Ga0068868_101429297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300005345\|Ga0070692_10758110	Not Available	659	Open in IMG/M
3300005441\|Ga0070700_100805714	Not Available	757	Open in IMG/M
3300005564\|Ga0070664_101258937	Not Available	698	Open in IMG/M
3300005578\|Ga0068854_101837053	Not Available	556	Open in IMG/M
3300005719\|Ga0068861_102288488	Not Available	542	Open in IMG/M
3300006034\|Ga0066656_10793248	Not Available	607	Open in IMG/M
3300006058\|Ga0075432_10426052	Not Available	578	Open in IMG/M
3300006791\|Ga0066653_10476759	Not Available	633	Open in IMG/M
3300006791\|Ga0066653_10688100	Not Available	527	Open in IMG/M
3300006844\|Ga0075428_101162555	Not Available	814	Open in IMG/M
3300009012\|Ga0066710_100432388	Not Available	1970	Open in IMG/M
3300009094\|Ga0111539_12966646	Not Available	548	Open in IMG/M
3300009094\|Ga0111539_13481921	Not Available	505	Open in IMG/M
3300009148\|Ga0105243_10601436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1059	Open in IMG/M
3300009156\|Ga0111538_10951893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1087	Open in IMG/M
3300009789\|Ga0126307_10070120	Not Available	2758	Open in IMG/M
3300009789\|Ga0126307_10163678	All Organisms → cellular organisms → Bacteria	1782	Open in IMG/M
3300009789\|Ga0126307_10453496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1035	Open in IMG/M
3300009840\|Ga0126313_10054389	Not Available	2833	Open in IMG/M
3300009840\|Ga0126313_10133149	Not Available	1862	Open in IMG/M
3300009840\|Ga0126313_10329035	Not Available	1200	Open in IMG/M
3300009840\|Ga0126313_10332561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1193	Open in IMG/M
3300010037\|Ga0126304_10018408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3943	Open in IMG/M
3300010038\|Ga0126315_10136757	Not Available	1441	Open in IMG/M
3300010038\|Ga0126315_10534804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	751	Open in IMG/M
3300010038\|Ga0126315_10704395	Not Available	659	Open in IMG/M
3300010039\|Ga0126309_10139194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1293	Open in IMG/M
3300010039\|Ga0126309_10176688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1166	Open in IMG/M
3300010039\|Ga0126309_10564575	Not Available	711	Open in IMG/M
3300010039\|Ga0126309_11034864	Not Available	553	Open in IMG/M
3300010040\|Ga0126308_10003069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	7358	Open in IMG/M
3300010040\|Ga0126308_10130658	Not Available	1569	Open in IMG/M
3300010040\|Ga0126308_10819986	Not Available	645	Open in IMG/M
3300010042\|Ga0126314_11366287	Not Available	532	Open in IMG/M
3300010044\|Ga0126310_10115514	Not Available	1654	Open in IMG/M
3300010044\|Ga0126310_10314509	Not Available	1084	Open in IMG/M
3300010045\|Ga0126311_10388320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300010166\|Ga0126306_10167965	All Organisms → cellular organisms → Bacteria	1640	Open in IMG/M
3300010323\|Ga0134086_10290023	Not Available	633	Open in IMG/M
3300010325\|Ga0134064_10163556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	777	Open in IMG/M
3300010326\|Ga0134065_10051158	Not Available	1273	Open in IMG/M
3300010326\|Ga0134065_10503285	Not Available	505	Open in IMG/M
3300010375\|Ga0105239_11034019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	945	Open in IMG/M
3300010375\|Ga0105239_11617727	Not Available	749	Open in IMG/M
3300010399\|Ga0134127_10844078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	968	Open in IMG/M
3300011003\|Ga0138514_100133005	Not Available	550	Open in IMG/M
3300012210\|Ga0137378_10489097	Not Available	1137	Open in IMG/M
3300012285\|Ga0137370_10124364	Not Available	1473	Open in IMG/M
3300012350\|Ga0137372_10210795	Not Available	1549	Open in IMG/M
3300012356\|Ga0137371_11029651	Not Available	623	Open in IMG/M
3300012469\|Ga0150984_101252283	Not Available	567	Open in IMG/M
3300012469\|Ga0150984_123066202	Not Available	582	Open in IMG/M
3300012897\|Ga0157285_10372234	Not Available	507	Open in IMG/M
3300012951\|Ga0164300_11113511	Not Available	517	Open in IMG/M
3300012960\|Ga0164301_10712831	Not Available	756	Open in IMG/M
3300013297\|Ga0157378_13140530	Not Available	513	Open in IMG/M
3300013307\|Ga0157372_11781295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	708	Open in IMG/M
3300014166\|Ga0134079_10416068	Not Available	629	Open in IMG/M
3300014326\|Ga0157380_12224745	Not Available	612	Open in IMG/M
3300015371\|Ga0132258_12588629	Not Available	1268	Open in IMG/M
3300015373\|Ga0132257_103739059	Not Available	554	Open in IMG/M
3300015374\|Ga0132255_102667878	Not Available	764	Open in IMG/M
3300017965\|Ga0190266_10096936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1200	Open in IMG/M
3300017965\|Ga0190266_11040223	Not Available	552	Open in IMG/M
3300018061\|Ga0184619_10180634	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	968	Open in IMG/M
3300018432\|Ga0190275_10078685	Not Available	2854	Open in IMG/M
3300018432\|Ga0190275_11098611	Not Available	869	Open in IMG/M
3300018466\|Ga0190268_11568330	Not Available	577	Open in IMG/M
3300018469\|Ga0190270_10264977	Not Available	1506	Open in IMG/M
3300018469\|Ga0190270_10458473	Not Available	1201	Open in IMG/M
3300018476\|Ga0190274_12601440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	603	Open in IMG/M
3300018482\|Ga0066669_11111485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	713	Open in IMG/M
3300019356\|Ga0173481_10235370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	815	Open in IMG/M
3300019356\|Ga0173481_10344195	Not Available	710	Open in IMG/M
3300019767\|Ga0190267_10410432	Not Available	760	Open in IMG/M
3300019767\|Ga0190267_11678544	Not Available	502	Open in IMG/M
3300025918\|Ga0207662_10641058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	741	Open in IMG/M
3300025986\|Ga0207658_11218140	Not Available	688	Open in IMG/M
3300026023\|Ga0207677_11408398	Not Available	642	Open in IMG/M
3300028596\|Ga0247821_10766459	Not Available	634	Open in IMG/M
3300028596\|Ga0247821_10773307	Not Available	631	Open in IMG/M
3300028704\|Ga0307321_1113284	Not Available	558	Open in IMG/M
3300028705\|Ga0307276_10008197	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300028722\|Ga0307319_10167157	Not Available	716	Open in IMG/M
3300028811\|Ga0307292_10143668	Not Available	961	Open in IMG/M
3300028881\|Ga0307277_10179493	Not Available	924	Open in IMG/M
3300030336\|Ga0247826_10332550	Not Available	1101	Open in IMG/M
3300030336\|Ga0247826_11537715	Not Available	540	Open in IMG/M
3300031731\|Ga0307405_10553348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	931	Open in IMG/M
3300031731\|Ga0307405_11779956	Not Available	547	Open in IMG/M
3300031740\|Ga0307468_101010347	Not Available	733	Open in IMG/M
3300031824\|Ga0307413_10574090	Not Available	919	Open in IMG/M
3300031852\|Ga0307410_10690310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	860	Open in IMG/M
3300031901\|Ga0307406_10484036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1000	Open in IMG/M
3300031903\|Ga0307407_10838333	Not Available	702	Open in IMG/M
3300031911\|Ga0307412_11581394	Not Available	598	Open in IMG/M
3300031995\|Ga0307409_100446389	Not Available	1247	Open in IMG/M
3300031995\|Ga0307409_101126447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	806	Open in IMG/M
3300032002\|Ga0307416_101905168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300032004\|Ga0307414_11085444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	739	Open in IMG/M
3300032005\|Ga0307411_10438172	Not Available	1090	Open in IMG/M
3300032126\|Ga0307415_101682665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	611	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.09%
Host-Associated	Host-Associated	28.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.31%
Plants	Host-Associated → Plants	28.91%
Aquatic	Environmental → Aquatic	0.78%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.03%
Sediment	Environmental → Aquatic → Sediment	0.78%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.75%
Loam	Environmental → Terrestrial → Soil → Loam	15.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.75%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	13.28%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.69%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.12%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.34%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.34%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.78%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.78%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	17.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.62%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	13.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	10.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.47%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.91%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.91%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.12%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.12%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.34%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.56%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.56%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.78%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.78%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.78%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.78%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.78%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.78%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.78%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.78%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_05048812	3300000033	Soil	MPPPRTPENLEPDDGSGAQRRHDQAPAGPSHANPVTRIHIRAGGYIARHPTLLRVLEWPGWNNPGGSINP*
F14TB_1007610682	3300001431	Soil	MPSPRTPHDLEPDDGSGAQPRHDQVPAEPSRANPVKCIQMLTGGYIARHSALLTVLEWLGWNIPGSSINP*
F14TB_1023620471	3300001431	Soil	MPSPRTPRDLDPDDGSGAQPRHDQVPAEPSRANPVKXXQTLAGGYIARHPTLLRALEWLGWNNPGGYMTP*
C688J18823_104767033	3300001686	Soil	MPSPTTPHDLDPDDGSGAQPRHDQAPAEPSRANPVLRLRILTGGDLARRPALLGVLEWLGWNSPGGSINP*
C688J35102_1178406331	3300002568	Soil	TRFAKRGPTTKGAPMPSPRTPHDLGPDDGSGERRHDQAPAEPSRVNPVTRIQTLTGAYITRHPALLSVLEWLGWNNPGGYMNP*
C688J35102_1192901101	3300002568	Soil	MPSPRTPHDLELEDGSGAQPRHDQAPAEPTRVNPVTRIQTLTGGYIARHPAVLRVL
C688J35102_1193219252	3300002568	Soil	MPSPRTPHDLEPDDGSGAQPRHDQVPAEPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNIPGSSINP*
C688J35102_1198413282	3300002568	Soil	MPAPRTPDELEPDDGTGAQPQHDQAPAEPSRANPVLRIQIRASGYIAKHPRLLGVLEWLGWNIPGASFNP*
C688J35102_1201994073	3300002568	Soil	MPSPRTPHDLKPDDGSGAQRRHDQAPAEPSRVNPVTRIQTRARGYIARHPALLRVLEWLGWNNPGGSINP*
C688J35102_1206258633	3300002568	Soil	MPSPRTPHDLEPDDGSGAQRRHDQAPAGPSHVNPVTRIQTRAGGHIARHPTLLRVLEWLGWNNPGGSINP*
C688J35102_1206985562	3300002568	Soil	MPSRTPRELQPGDGSGPQPRPDQAQAEPHANPVTRIQILTGGYLARHPALLTLLEGLIWNNPGGSVNP*
C688J35102_1208432312	3300002568	Soil	MPAPGTPQQLDSEDGSGAQPRDDRVPAEPSRAKPFMRIQILAGGYVARHPALLTVLEGLGWHNPGDSMNP*
C688J35102_1209679936	3300002568	Soil	MQTKPAGTEPEDDSGSRPPDDQLATEPSHANPVTRIRILASGYIARHPTLLRVLEWLGWNNPGGGMNP*
Ga0063454_1004541711	3300004081	Soil	RAPMPAPRTPDELEPDDGTGAQPQHDQAPAEPSRANPVLRIQIRASGYIAKHPRLLGVLEWLGWNIPGASFNP*
Ga0063454_1007243682	3300004081	Soil	MPSRTPQELEPAEGSGPQPRPYQARAEPSRANLVTRIQILTCGYLARHPALLTLLEGLGWNSPAGSVNP*
Ga0063454_1011606312	3300004081	Soil	MPSPRTPHDLELEDGSGAQPRHDQAPAEPTRVNPVTRIQTLTGGYIARHPAVLRVLEWLSWNNPGGNINP*
Ga0063454_1015715171	3300004081	Soil	MPAPRTPRGLDPDDGSSAQPQHFQAPAEPSPANPVTRIQTRAGGYIARHPALLRVLEWLAWNDPGGSMNP
Ga0063455_1004465481	3300004153	Soil	MPSRTPQELEPAEGSGPQPRPYQARAEPSRANLVTRIQILTCGCLARHPALLTLLEGLGWNNP
Ga0063356_1033752901	3300004463	Arabidopsis Thaliana Rhizosphere	NLEPDDGSGAQRRHDQAPAGPSHANPVTRIHIRAGGYIARHPTLLRVLEWLSWNNPGGSINP*
Ga0063356_1034485372	3300004463	Arabidopsis Thaliana Rhizosphere	MPSPRTPRDLDPDDGSGAQPQHDQAPAEPSRANPVTRIQTLTGGYITRHPTLLRALEWLGWNNPGGYMTP*
Ga0062595_1001420244	3300004479	Soil	MPAPRTPRDLEPDDGSGAQPQHDQTPAERTRANPVTRIQTLTGGYLARHPALLGVLEWL
Ga0062595_1007370573	3300004479	Soil	MPSPTTPHDLDPDDGSGAQPRHDQAPAEPSRANPVLRLRILTGGYLARHPALLGVLEWLGWNNPGGSINP*
Ga0066683_106699042	3300005172	Soil	MPSAATPHDLDPDDGSGAQPRHDQAPAEPSRANPVLRLRILTGGYLARHPALLGVLEWLGWNSPGGSINP*
Ga0066685_106870561	3300005180	Soil	MPSPRTPHDLEPDDGSGAQRRHAQAPAEPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNIPGSSINP*
Ga0066671_108415822	3300005184	Soil	MPSPRTPHDLEPEDGSGAQRRHDQAPAEPTRANPVTRIQTRAGGYLARHPTLLRVLEWLGWNNPGGSINP*
Ga0068868_1014292972	3300005338	Miscanthus Rhizosphere	MPSPRTPHDLEPDDGSGAQPRHAQAPGEPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNIPGSSINP*
Ga0070692_107581101	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MPSPRTPHDLEPDDGSGAQPRHAQAPAEPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNIPGSSINP*
Ga0070700_1008057141	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPSPRTPHDLEPDDGSGAQPRHAQAPAEPSRANPVKRIQMLTGGYIARHPALLTVLGWLGWNIPGSSINP*
Ga0070664_1012589372	3300005564	Corn Rhizosphere	VSAHDDGSGAAPRHDQAPIERSRANRIMRVQALIGGYFARRPALLAVLEWLGRNNPGGSINP*
Ga0068854_1018370531	3300005578	Corn Rhizosphere	MPPPRTPENLEPDDGSGAQRRHDQAPAEPSHVNPVTHIQTRAGGYIARHPTLLRVLEWLAWNNPGGSINP*
Ga0068861_1022884882	3300005719	Switchgrass Rhizosphere	MPSPRTPQDLESEDGSGAQPRHDQAQAEPTRANPVTRIKTLTGGYIAGHPALLRVLEWLGWNNPGGS
Ga0066656_107932481	3300006034	Soil	MPSPRTPHDLGPEDGSGARRHDQAPAEPTRANPVTRIQTHAGGYLARHPALLSVLEWLGWNNPGSSINP*
Ga0075432_104260522	3300006058	Populus Rhizosphere	MSDKPPTHPLRYSGPTTEGAPMPSPRTPRDLDPDDGSGAQPQHDQAPAEPSRANPVTRIQTLTGGYIARHPTLLPVLAWLGWNNPGDSMNP*
Ga0066653_104767591	3300006791	Soil	MPSPRTPHDLGPDDGSGAQRRHDQAPAEPSRVNPVTPIQTRARGYIARHPALLRVLEWLGWNNPGGSINP*
Ga0066653_106881002	3300006791	Soil	MPSPRTPHDLEPEDGSGAQPRHDQAPAEPSRANPVTRMETLTGGYLARHPALLRVLEWLGWNNPGGYMNP*
Ga0075428_1011625551	3300006844	Populus Rhizosphere	MPAPRTPRDLEPEDGSSAQPQHDQAPAEPSCANPVTRIQTLAGGYIARHPTLLPVMQWLGWNNPGDSINP*
Ga0066710_1004323882	3300009012	Grasslands Soil	MPSPRTPHDLEPDDGSGAQPRHAQAPAEPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNNPGGSINP
Ga0111539_129666461	3300009094	Populus Rhizosphere	MPSPRTPRDLDPDDGSGAQPQHDQAPAEPSRANPVTRIQTLTGGYIARHPTLLRALEWLGWNNPGGYMTP*
Ga0111539_134819211	3300009094	Populus Rhizosphere	MPAPRTPHDLDPDDGCGAQPQHDQAPAEPSPANPVTRIQTLTGGYIARHPTLLPVLEWLGWNNPGDSMNP*
Ga0105243_106014362	3300009148	Miscanthus Rhizosphere	MPPPRTPENLEPDDGSGAQRRHDQAPAEPSHVNPVTHIQTRAGGYIARHPTLLRVLEWLAWNKPGGSINP*
Ga0111538_109518931	3300009156	Populus Rhizosphere	MPAPRTPHDLDPDDGCGAQPQHDQAPAEPSPANPVTRIQTLTGGYIARHPTLLRALEWLGWNNPGGYMTP*
Ga0126307_100701204	3300009789	Serpentine Soil	MPSPRTPHDLEPDDGSGAQRRHDEAPAEPSRANPVRRIQTLTGGYIARHPALLRVLEWLGWNNPGGYMNP*
Ga0126307_101636782	3300009789	Serpentine Soil	MPPPRTSENLEPDDGSGAQRRHDQAPAGPSHANPVTRIQIRAGGYIARHPTLLRVLEWLSWNNTGGSINP*
Ga0126307_104534963	3300009789	Serpentine Soil	MPSPTTPHDLDPDDGSGAQPRHDQAPAEPSRANPVLRLRILTGGYLARHPALLGVLEWLGWNSPGGSINP*
Ga0126313_100543892	3300009840	Serpentine Soil	MPAPRTPRDLDRDDGSGARPQLDQAPAEPSHANPVTRFQILAGGYIGRHPTLLRVLDWLGWNNPGGSMNP*
Ga0126313_101331493	3300009840	Serpentine Soil	MPPPRTSENLEPDDGSGAQRRHDQAPAGPSHANPVTRIQIRAGGYIARHPTLLGVLEWLSWNNTGGSINP*
Ga0126313_103290351	3300009840	Serpentine Soil	EDGSGAQPRHDQAPAEPSRANPVTRIQILAGGYLARHPALLGVLEWLGWNSPGGNINP*
Ga0126313_103325612	3300009840	Serpentine Soil	MPAPRTPRDLEPDDGSGAQPQHDQAPAEPSRANPVTRIQTLAGGYIARHPTLLRVLEWLGWNNPGGSMNP*
Ga0126304_100184082	3300010037	Serpentine Soil	MPPPRTPHDLEPDDGSGAQRRHDQAPAGPSHANPVTRIQIRAGGYIARHPTLLRVLEWLSWNNTGGSINP*
Ga0126315_101367573	3300010038	Serpentine Soil	MPAPRTPQNLEPEDGSGAPPRHDQAPAEPWRANPVRRIQTLVGGYLARHPALLTVLEWLGWNNPGGSMNP*
Ga0126315_105348041	3300010038	Serpentine Soil	MPAPRTPRDLEPEDGSGAQPQHDQAPVEPSRANPVTRIQTRAGGYIARHPTLLRVLEWLAWNNPGGSMNP*
Ga0126315_107043951	3300010038	Serpentine Soil	MPSPTTPHDLDPDDGSGAQPRHDQAPAEPSRANSVLRLRILTGGYLARHPALLGVLEWLGWNSPGGSINP*
Ga0126309_101391942	3300010039	Serpentine Soil	MPSPTTPHDLDPADGSGAQPRHDQAPAEPSRANPVLRLRILTGGYLARHPALLGVLEWLGWNSPGGSINP*
Ga0126309_101766882	3300010039	Serpentine Soil	MPSPRTPQHLEPDDGSGAQRRHDQAPAERLRASPGTRIQILAGGFLARHPTLSAVLESLGWNNPGGSMGP*
Ga0126309_105645751	3300010039	Serpentine Soil	MPPPRTSENLEPDDGSGAQRRHDQAPAGPSHANPVTRIQIRAGGYIARHPTLLRVLEWLSWNNTGGSSIDP*
Ga0126309_110348641	3300010039	Serpentine Soil	PRQKELPMPSPRTPQNLEPEDGPGAQRRHDQAPAERSRANPAKRIQILAGGCLARHPTLLTVLESLGWNNPGSSMGP*
Ga0126308_100030696	3300010040	Serpentine Soil	MPAPRTPRDLDRDDGSGARPQLDQAPAEPSHANPVTRVQILAGGYIGRHPTLLRVLDWLGWNNPGGSMNP*
Ga0126308_101306581	3300010040	Serpentine Soil	MPHDLEPDDGSGAQRRHDEAPAEPSRANPVRRIQTLTGGYIARHPALLRVLEWLGWNNPGGYMNP*
Ga0126308_108199862	3300010040	Serpentine Soil	MPSPTTPHDLDPDDGSGAQPRHDQAPAEPPRANPVLRLRILTGGYLARHPAVLGVLEWLGWNSPGGSINP*
Ga0126314_113662871	3300010042	Serpentine Soil	MTSPRTPQNLEPEDGSGAPPRHDQAPAEPWRANPVRRIQTLVGGYLARHPALLTVLEWLGWNNPGGSMNP*
Ga0126310_101155143	3300010044	Serpentine Soil	MPAPRTPRDLEPEDGSGAQPQHDQAPVEPSRANPVTRIQTRAGGYIARHPTLLRVLEWLGWNNPGGSMNP*
Ga0126310_103145092	3300010044	Serpentine Soil	MPSPRTPRDLDPDDGSGAQPQHDHAPAEPSRANPATRIQTRTGGYIARHPTLLRALEWLGWNNPGGYMTP*
Ga0126311_103883202	3300010045	Serpentine Soil	MPSPRTPHDLEPEDGSGAQPRHDQAPAEPSRANPVKRIQMLTGEYIARHPALLTVLEWLGWYTPGSSINP*
Ga0126306_101679652	3300010166	Serpentine Soil	MPPPRTSENLEPDDGSGAQRRHDQAPAGPSHANPVTRIQIRAGGCIARRPTLLRVLEWLSWNNTGGSINP*
Ga0134086_102900231	3300010323	Grasslands Soil	MPSPRTPHDLGPDDGSGERRHDQAPAEPSCVNPVTRIQTLTGAYITRHPALLSVLEWLGWNNPGGYMNP*
Ga0134064_101635562	3300010325	Grasslands Soil	MPSPTTPHDLDPDDGSGAQPRHDQAPAEPSRANPVLRLRILTGGYLARHPALLRVLEWLGWNNPGGSINP*
Ga0134065_100511581	3300010326	Grasslands Soil	EGASMPSPRTPHDLEPDDGSGAQPRHAQAPAEPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNIPGSSINP*
Ga0134065_105032852	3300010326	Grasslands Soil	MPSPTTPHDLDPDDGSGAQPRHDQAPAEPSRANPVLRLRILTGGDLARHPALLGVLEWLGWNSPGGSINP*
Ga0105239_110340192	3300010375	Corn Rhizosphere	MPSPRTPHDLEPDDGSGAQPRHAQAPGEPSRANPVKRIQMLTGGYIARHPALLTVLGWLGWNIPGSSINP*
Ga0105239_116177271	3300010375	Corn Rhizosphere	GSGAQRRHDQAPAEPSHVNPVTRSQTRAGGYIARHPTLLRVLEWLAWNNPGGSINP*
Ga0134127_108440782	3300010399	Terrestrial Soil	MPLPRTPHDLEPDDGSGAQPRHAQAPGEPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNIPGSSINP*
Ga0138514_1001330051	3300011003	Soil	MPSPRQPQKLEPEDGSGAQRRHDQVPAEPSRANLVTRIQTLIGGYLARHPTLLKVLEELGWNNPGGSMNP*
Ga0137378_104890971	3300012210	Vadose Zone Soil	PEDGSGAQPRHDQAPVEPTRANPVTRIQTLTGGYTARHPALLRVLEWLGWNSPGGSINP*
Ga0137370_101243642	3300012285	Vadose Zone Soil	MPSPPTPHDLDPDDGSGAQPRHDQAPAEPSRANPVLRLRILTGGYLARHPALLGVLEWLGWNSPGGSINP*
Ga0137372_102107952	3300012350	Vadose Zone Soil	MPSPRTPHDLEPDDGSGAQRRHDQAPAGPSHANPVTRIQTRAGGYLARHPTLLRVLEWLGWNNPGGSINP*
Ga0137371_110296513	3300012356	Vadose Zone Soil	MPSPTTPHDLDPDDGSGAQPRHDQAQAEPTRANPVTRIQTLTGGYIARHPALLRVLEWLGWNNPGGYMNP*
Ga0150984_1012522832	3300012469	Avena Fatua Rhizosphere	MPSPRTPHDLEPDDGSGGQRRHDQAPAEPSRVNPVTRIQTLTGGYIARRPALLRVLEWLGWNNPGGYMNP*
Ga0150984_1230662021	3300012469	Avena Fatua Rhizosphere	SLINRTESHMPSRTPHHSQSADGSGAQPPGGKAPAEPSDANPLMRIPILTGRFVARHPALLAVLNWLGWNNPGGSMNP*
Ga0157285_103722341	3300012897	Soil	MPPPRTPENLEPDDGSGAQRRHDQAPAEPARATPATRIQTLAGRYIARHPTLLRVLEWLAWNNPGGSINP*
Ga0164300_111135112	3300012951	Soil	MPSPRTPHDLEPDDGSGAQPRHAQALAEPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNIPGSSINP*
Ga0164301_107128311	3300012960	Soil	MPPPRTPENLEPDDGSGAPRRHDQAPAEPSHVNPVTRIQTRAGGYIARHPTLLRVLEWLAWNNPGGSINP*
Ga0157378_131405301	3300013297	Miscanthus Rhizosphere	MPSPRTPHDLEPDDGSGAQPRHDQAPARPSRANPVKRIQMLTGGYIARHPALLTVLGWLGWNIPGSSINP*
Ga0157372_117812952	3300013307	Corn Rhizosphere	VSAHDDGSGAAPRHDQAPIERSRANRIMRVQALIGGYFARRPALLAVLEWLGRNNPGGSIGTGGH*
Ga0134079_104160681	3300014166	Grasslands Soil	MPSPRTPHDLEPDDGSGAQPRHAQAPAEPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNNPGGSINP*
Ga0157380_122247452	3300014326	Switchgrass Rhizosphere	VSAHDDGSGAAPRHDQAPIERSRANRIMRVQALIGGYFARRPALLAVLEWLGRNNPGGCINP*
Ga0132258_125886292	3300015371	Arabidopsis Rhizosphere	MPPTRTSENLEPDDGSGAQRRHDQAPAGPSHANPVTRIHIRAGGYIARHPTLLRVLEWLSWNNTGGSINP*
Ga0132257_1037390591	3300015373	Arabidopsis Rhizosphere	MPSPRTPHDLEPDDGSGAQRRHDQAPAGPSHANPVTRIHIRAGGYIARHPTLLRVLEWLSWNNTGGSINP*
Ga0132255_1026678781	3300015374	Arabidopsis Rhizosphere	MPSPRTPHDLEPEDGSGAQPRHDQAPAEPSRANPVTRIQILASGYLARHPALLGVLEWLGWNSPGGNINP*
Ga0190266_100969363	3300017965	Soil	MPSPTTPHDLDPDDGSGAQPRHDQAPAEPSRANPVLRLRILTGGYLARHPALLGVLEWLGWNSPGGSINP
Ga0190266_110402231	3300017965	Soil	MPSPRTPRDLEPDDGSGAQPRHAQAPAEPSRANPVKRIQMLTGGYIARHPALLTVLKWLGWNIPGSSINP
Ga0184619_101806341	3300018061	Groundwater Sediment	MPAPRTPRDLDPDDGSGAQPRHDQVPAEPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNIPGSSINP
Ga0190275_100786852	3300018432	Soil	MPPPRTSENLEPDDGSGAQRRHDQAPAGPSHANPVTRIQIRAGGYIARHPTLLRVLEWLSWNNTGGSINP
Ga0190275_110986111	3300018432	Soil	MPAPKTPRDLEPDDGSGAQPQHDQTPAEPSRANPVTRIQTLAGGYIGRHPALLRVLEWL
Ga0190268_115683301	3300018466	Soil	MPPPRTPENLEPDDGSGAQRRHDQAPAGPSHANPVTRIQIRAGGYIARHPTLLRVLEWLGWNNPGGS
Ga0190270_102649771	3300018469	Soil	MPPPRTPENLEPDDGSGAQRRHDQAPAGPSHANPVTRIQIRAGGYIARHPTLLRVLEWLSWNNTG
Ga0190270_104584732	3300018469	Soil	MPSPRTPQDLEPEDGSGAQPRHDQAQAEPTRANPVTRIQTLTGGYIARHPALSRVLEWLSWNNPGGSINP
Ga0190274_126014402	3300018476	Soil	MPSPRTPHDLEPDGSGAQPRHDQAPAEPSRANPVTRIQILAGGYLARHPALLGVLEWLGWNNPGGYMTP
Ga0066669_111114851	3300018482	Grasslands Soil	MPSPTTPHDLDPDDGSGAQPRHDQAPAEPSRANPVLRLRTLTGGYLARHPALLGVLEWLGWNSPGGSINP
Ga0173481_102353702	3300019356	Soil	MPSPRTPQDLESEDGSGAQPRHDQAQAEPTRANPVTRIKTLTGGYIARHPALLRVLEWLGWNNLGGSINP
Ga0173481_103441951	3300019356	Soil	MPPPRTPENLEPDDGSGAQRRHDQAPAGPSRANPVTRIQTLAGGYIARHPTLLRVLEWLSWNNPGGSINP
Ga0190267_104104322	3300019767	Soil	MPSPTTPHDLDPDDGSGAQPRHDQAPAEPSRANPVLRLRILTGGYLARHPALLGVLEWLGWNNPGGSINP
Ga0190267_116785441	3300019767	Soil	MPSPRMPQDLESEDGAGAQPRHDHAQAEPTRANPVTRIQTLTGGYIARHPALLTVLEWLGWNNPGNYMNP
Ga0207662_106410582	3300025918	Switchgrass Rhizosphere	MPSPRTPHDLEPDDGSGAQPRHAQAPAEPSRANPVKRIQMLTGGYIARHPALLTVLGWLGWNIPGSSINP
Ga0207658_112181402	3300025986	Switchgrass Rhizosphere	MPSPRTPHDLEPDDGSGAQPRHDQAPARPSRANPVKRIQMLTGGYIARHPALLTVLGWLGWNIPGSSINP
Ga0207677_114083981	3300026023	Miscanthus Rhizosphere	MPSPRTPHDLEPDDGSGAQPRHDQAPARPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNIPGSSINP
Ga0247821_107664592	3300028596	Soil	MPSPRTPHDLEPDDGSGAQPRHAQAPAEPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNIPGSSINP
Ga0247821_107733072	3300028596	Soil	MPAPTTPQDLEPEDGSSAQPQHDQAPAEPSRANPVTRIQTLAGGYLARHPTLLRVLEWLGWNNPG
Ga0307321_11132841	3300028704	Soil	MPSPRTPHDLEPDDGSGAQPRHDQAPAEPSRANPVTRIETLTGGYLARHPALLTVLEWLGWNNPGSSINP
Ga0307276_100081973	3300028705	Soil	MRSARTPHDLEPDDGSGAQPRHDQAPAEPSRANPVTRIETLTGGYLARHPALLTVLEWLGWNNPGGSINP
Ga0307319_101671572	3300028722	Soil	MPAPRTPRDLEPEDGSGAQPQHDQAPAEPSRANPVTRIQTRAGGYIARHPTLLRVLEWLS
Ga0307292_101436681	3300028811	Soil	MPSPRTPHDLEPDDGSGAQPRHDQAPAEPSRANPVKRIQMLTGGYIARHPALLTVLEWLGWNNPGSSINP
Ga0307277_101794932	3300028881	Soil	MPSPRTPQDLEPEDGSGAQPRHDQAQAEPTRANPVTRIQTLTGGYIARHPALLTVLEWLGWNIPGSSINP
Ga0247826_103325503	3300030336	Soil	MPPPRTPENLEPDDGSGAQRRHDQAPAEPSHVNPVTRIQTRTGGYIARHPTLLRVLEW
Ga0247826_115377151	3300030336	Soil	MPAPTTPQDLEPEDGSSAQPQHDQAPAEPSRANPVTRIQTLAGGYLARHPTLLRVLEWLGWNNPGGSMNP
Ga0307405_105533481	3300031731	Rhizosphere	MPAPRTPRDPEPQDGSGAQPQHDQAPAEPSRANPVTRIQTRAGGYIARHPTLLRVLEWLGWNNPGGSMNP
Ga0307405_117799562	3300031731	Rhizosphere	MPAPRTPRDLEPQDGSSAQPQHDQAPAEPSRANPVRRIQTLAGGYIARHPTLLRVLEWLGWNNPGGSMNP
Ga0307468_1010103471	3300031740	Hardwood Forest Soil	MPSPRTPQDLESEDGSGAQPRHDQAQAEPTRANPVTRIKTLTGGYIARHPALLRVLEWLGWNNPGGSINP
Ga0307413_105740901	3300031824	Rhizosphere	MPAPRTPRDLEPQDGSSAQPQHDQAPAEPSRANPVTRIQTLAGGYITRHPTPLRVLEWLGWNNPGGYMNP
Ga0307410_106903102	3300031852	Rhizosphere	MPAPRTPRDLDCDDGSGARPQLDQAPAEPSHANPVTRVQILAGGYIGRHPTPLRVLDWLGWNNPGGSMNP
Ga0307406_104840362	3300031901	Rhizosphere	MPSPRTPHDLEPEDGSGAQPRHDQAPAHPTRANPVTRIQTLTGGYLARHPALSRVLEWLGWNNPGGSINP
Ga0307407_108383331	3300031903	Rhizosphere	MPAPRTPRDLEPEDGSGAQPRHDQAPAEPSRANPVTRIQILAGGYLARHPALLGVLEWLGWN
Ga0307412_115813941	3300031911	Rhizosphere	MPSPRTPRDLDPDDGSGAQPQHDHAPAEPARANPVTRIQNRTGGYIARHPTLLRVLEW
Ga0307409_1004463893	3300031995	Rhizosphere	MPPPRTSENLEPDDGSGAQRRHDQAPAGPSHANPVTRIQIRAGGYIARHPTLLPVLEWLSWNNTGGSINP
Ga0307409_1011264471	3300031995	Rhizosphere	APMPSPRTPRDLDPDDGSGAQPQHDQAPAEPSRANPVTRIQTLAGGYITRHPTPLRVLEWLGWNNPGGYMNP
Ga0307416_1019051682	3300032002	Rhizosphere	MPSPRTPQDLEPEGGSGAQPRHDQPQAGPTRANPVTRIQTLTGGYIARHPALLTVLEWLGWNNPGGSINP
Ga0307414_110854441	3300032004	Rhizosphere	MPPPRTSENLEPDDGSGAQRRHDQAPAGPSRGNPVTRIQIRAGGYIARHPTLLPVLEWLSWNNTGGSINP
Ga0307411_104381721	3300032005	Rhizosphere	MPAPRTPRDLEPQDGSSAQPQHDQAPAEPSRANPVRRIQTLAGGYIARHPTLLRVLEWLGWN
Ga0307415_1016826652	3300032126	Rhizosphere	PRDLDPDDGSGAQPQHDQAPAEPSRANPVTRIQTLAGGYITRHPTPLRVLEWLGWNNPGGYMNP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F065225

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences