NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F065610

Metagenome / Metatranscriptome Family F065610

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F065610
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 72 residues
Representative Sequence LKRNVLFQCICQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDEPVKIYYEKDGSWLEARPKSQHFG
Number of Associated Samples 97
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 66.67 %
% of genes near scaffold ends (potentially truncated) 40.94 %
% of genes from short scaffolds (< 2000 bps) 87.40 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.126 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(31.496 % of family members)
Environment Ontology (ENVO) Unclassified
(46.457 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(67.717 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 41.00%    Coil/Unstructured: 59.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.68
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF13620CarboxypepD_reg 32.28
PF00005ABC_tran 2.36
PF00574CLP_protease 1.57
PF13578Methyltransf_24 1.57
PF07883Cupin_2 0.79
PF02599CsrA 0.79
PF00082Peptidase_S8 0.79
PF13709DUF4159 0.79
PF07519Tannase 0.79
PF00174Oxidored_molyb 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 3.15
COG0740ATP-dependent protease ClpP, protease subunitPosttranslational modification, protein turnover, chaperones [O] 3.15
COG1030Membrane-bound serine protease NfeD, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.57
COG1551sRNA-binding carbon storage regulator CsrASignal transduction mechanisms [T] 0.79
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 0.79
COG3915Uncharacterized conserved proteinFunction unknown [S] 0.79

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.13 %
UnclassifiedrootN/A7.87 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000559|F14TC_100835890All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300002560|JGI25383J37093_10028024All Organisms → cellular organisms → Bacteria → Proteobacteria1887Open in IMG/M
3300002908|JGI25382J43887_10123822All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter1342Open in IMG/M
3300004631|Ga0058899_12088600All Organisms → cellular organisms → Bacteria → Acidobacteria653Open in IMG/M
3300004801|Ga0058860_11640984All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300005166|Ga0066674_10083013All Organisms → cellular organisms → Bacteria → Proteobacteria1476Open in IMG/M
3300005167|Ga0066672_10512037All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium779Open in IMG/M
3300005172|Ga0066683_10525314All Organisms → cellular organisms → Bacteria → Acidobacteria722Open in IMG/M
3300005180|Ga0066685_10123213All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1747Open in IMG/M
3300005180|Ga0066685_10281209All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1150Open in IMG/M
3300005184|Ga0066671_10050197All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2104Open in IMG/M
3300005184|Ga0066671_10256625All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1079Open in IMG/M
3300005186|Ga0066676_10832040All Organisms → cellular organisms → Bacteria → Acidobacteria623Open in IMG/M
3300005187|Ga0066675_11152673All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300005332|Ga0066388_102795821All Organisms → cellular organisms → Bacteria891Open in IMG/M
3300005334|Ga0068869_101303738All Organisms → cellular organisms → Bacteria → Acidobacteria641Open in IMG/M
3300005445|Ga0070708_101394125All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium654Open in IMG/M
3300005446|Ga0066686_10384926All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium958Open in IMG/M
3300005450|Ga0066682_10631182All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium668Open in IMG/M
3300005450|Ga0066682_10694282All Organisms → cellular organisms → Bacteria → Acidobacteria626Open in IMG/M
3300005454|Ga0066687_10118879All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1359Open in IMG/M
3300005458|Ga0070681_10638765All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium979Open in IMG/M
3300005468|Ga0070707_100107922All Organisms → cellular organisms → Bacteria2701Open in IMG/M
3300005536|Ga0070697_100676480All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300005549|Ga0070704_101561761All Organisms → cellular organisms → Bacteria → Acidobacteria608Open in IMG/M
3300005552|Ga0066701_10102274All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1675Open in IMG/M
3300005553|Ga0066695_10296754All Organisms → cellular organisms → Bacteria → Acidobacteria1019Open in IMG/M
3300005553|Ga0066695_10560035All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium693Open in IMG/M
3300005555|Ga0066692_10208705All Organisms → cellular organisms → Bacteria1224Open in IMG/M
3300005555|Ga0066692_10835807All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300005557|Ga0066704_10358516All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium976Open in IMG/M
3300005558|Ga0066698_10160732All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1522Open in IMG/M
3300005558|Ga0066698_10845434All Organisms → cellular organisms → Bacteria → Acidobacteria589Open in IMG/M
3300005559|Ga0066700_10844767All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium613Open in IMG/M
3300005568|Ga0066703_10173671All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1301Open in IMG/M
3300005586|Ga0066691_10033297All Organisms → cellular organisms → Bacteria → Acidobacteria2678Open in IMG/M
3300005610|Ga0070763_10474295All Organisms → cellular organisms → Bacteria → Acidobacteria713Open in IMG/M
3300005764|Ga0066903_108679667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium517Open in IMG/M
3300006034|Ga0066656_10520992All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium774Open in IMG/M
3300006794|Ga0066658_10240812All Organisms → cellular organisms → Bacteria → Acidobacteria965Open in IMG/M
3300006796|Ga0066665_10117393All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1976Open in IMG/M
3300006796|Ga0066665_11657270All Organisms → cellular organisms → Bacteria → Acidobacteria505Open in IMG/M
3300006797|Ga0066659_10462035All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300006797|Ga0066659_10473003All Organisms → cellular organisms → Bacteria → Acidobacteria1000Open in IMG/M
3300006845|Ga0075421_101717306Not Available678Open in IMG/M
3300006845|Ga0075421_102095912All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300006854|Ga0075425_103011534All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300006871|Ga0075434_101281667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium744Open in IMG/M
3300006903|Ga0075426_10588474All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium830Open in IMG/M
3300006904|Ga0075424_100055665All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4132Open in IMG/M
3300006914|Ga0075436_101486570All Organisms → cellular organisms → Bacteria → Acidobacteria514Open in IMG/M
3300006954|Ga0079219_11497342All Organisms → cellular organisms → Bacteria → Acidobacteria611Open in IMG/M
3300007004|Ga0079218_11804907All Organisms → cellular organisms → Bacteria → Acidobacteria685Open in IMG/M
3300007255|Ga0099791_10676439All Organisms → cellular organisms → Bacteria → Acidobacteria507Open in IMG/M
3300009012|Ga0066710_101200974All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1175Open in IMG/M
3300009012|Ga0066710_101486240All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1046Open in IMG/M
3300009012|Ga0066710_101909960All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium888Open in IMG/M
3300009012|Ga0066710_104557640All Organisms → cellular organisms → Bacteria → Acidobacteria518Open in IMG/M
3300009090|Ga0099827_11528764All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium581Open in IMG/M
3300009137|Ga0066709_100014843All Organisms → cellular organisms → Bacteria7445Open in IMG/M
3300009137|Ga0066709_100876249All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1306Open in IMG/M
3300009137|Ga0066709_100965025All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1246Open in IMG/M
3300009176|Ga0105242_11974341All Organisms → cellular organisms → Bacteria → Acidobacteria625Open in IMG/M
3300010047|Ga0126382_10060238All Organisms → cellular organisms → Bacteria → Acidobacteria2274Open in IMG/M
3300010304|Ga0134088_10027179All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2564Open in IMG/M
3300010304|Ga0134088_10234487All Organisms → cellular organisms → Bacteria → Acidobacteria882Open in IMG/M
3300010333|Ga0134080_10593211All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300010366|Ga0126379_13755922All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300010376|Ga0126381_101357559All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA31027Open in IMG/M
3300011119|Ga0105246_10324610All Organisms → cellular organisms → Bacteria → Proteobacteria1252Open in IMG/M
3300011120|Ga0150983_15173862All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300011120|Ga0150983_16728064All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium710Open in IMG/M
3300011269|Ga0137392_11446215Not Available546Open in IMG/M
3300011441|Ga0137452_1023728All Organisms → cellular organisms → Bacteria → Acidobacteria1896Open in IMG/M
3300012207|Ga0137381_11621422All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300012212|Ga0150985_100198830All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300012212|Ga0150985_102303837All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium909Open in IMG/M
3300012212|Ga0150985_102778157All Organisms → cellular organisms → Bacteria → Acidobacteria672Open in IMG/M
3300012356|Ga0137371_10587186All Organisms → cellular organisms → Bacteria856Open in IMG/M
3300012359|Ga0137385_10249221All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1538Open in IMG/M
3300012362|Ga0137361_10520086All Organisms → cellular organisms → Bacteria → Acidobacteria1093Open in IMG/M
3300012469|Ga0150984_111050445All Organisms → cellular organisms → Bacteria1654Open in IMG/M
3300012469|Ga0150984_111496771Not Available592Open in IMG/M
3300012469|Ga0150984_115351124All Organisms → cellular organisms → Bacteria2232Open in IMG/M
3300012582|Ga0137358_10592190All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium744Open in IMG/M
3300012948|Ga0126375_10045535All Organisms → cellular organisms → Bacteria → Acidobacteria2298Open in IMG/M
3300015371|Ga0132258_10751470All Organisms → cellular organisms → Bacteria2456Open in IMG/M
3300016270|Ga0182036_10365362Not Available1116Open in IMG/M
3300016357|Ga0182032_11526122Not Available580Open in IMG/M
3300016404|Ga0182037_10337597All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1223Open in IMG/M
3300016404|Ga0182037_11636886All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300016422|Ga0182039_10214792All Organisms → cellular organisms → Bacteria → Acidobacteria1544Open in IMG/M
3300016422|Ga0182039_11593157All Organisms → cellular organisms → Bacteria → Acidobacteria596Open in IMG/M
3300016445|Ga0182038_10571507Not Available973Open in IMG/M
3300017654|Ga0134069_1277720All Organisms → cellular organisms → Bacteria → Acidobacteria588Open in IMG/M
3300018433|Ga0066667_10298055All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1252Open in IMG/M
3300018433|Ga0066667_10770578All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium814Open in IMG/M
3300018433|Ga0066667_11081876All Organisms → cellular organisms → Bacteria → Acidobacteria693Open in IMG/M
3300018468|Ga0066662_10210697All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1547Open in IMG/M
3300018468|Ga0066662_10240537All Organisms → cellular organisms → Bacteria → Acidobacteria1470Open in IMG/M
3300021170|Ga0210400_10654979All Organisms → cellular organisms → Bacteria865Open in IMG/M
3300022507|Ga0222729_1023353All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium745Open in IMG/M
3300025922|Ga0207646_10010915All Organisms → cellular organisms → Bacteria8824Open in IMG/M
3300025922|Ga0207646_10226991All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1687Open in IMG/M
3300026296|Ga0209235_1014653All Organisms → cellular organisms → Bacteria4289Open in IMG/M
3300026322|Ga0209687_1155029All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium736Open in IMG/M
3300026325|Ga0209152_10309281All Organisms → cellular organisms → Bacteria → Acidobacteria594Open in IMG/M
3300026326|Ga0209801_1015650All Organisms → cellular organisms → Bacteria → Acidobacteria3808Open in IMG/M
3300026329|Ga0209375_1159515All Organisms → cellular organisms → Bacteria → Acidobacteria935Open in IMG/M
3300026343|Ga0209159_1097993All Organisms → cellular organisms → Bacteria → Acidobacteria1281Open in IMG/M
3300026536|Ga0209058_1002008All Organisms → cellular organisms → Bacteria16998Open in IMG/M
3300026536|Ga0209058_1153103All Organisms → cellular organisms → Bacteria → Acidobacteria1077Open in IMG/M
3300026538|Ga0209056_10132552All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1951Open in IMG/M
3300026538|Ga0209056_10637334All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300031057|Ga0170834_100590452All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium682Open in IMG/M
3300031231|Ga0170824_110890137All Organisms → cellular organisms → Bacteria2322Open in IMG/M
3300031469|Ga0170819_12287056All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium654Open in IMG/M
3300031719|Ga0306917_10878344All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3702Open in IMG/M
3300031912|Ga0306921_11197600Not Available846Open in IMG/M
3300031912|Ga0306921_11235810Not Available830Open in IMG/M
3300031912|Ga0306921_11524752All Organisms → cellular organisms → Bacteria → Acidobacteria729Open in IMG/M
3300031941|Ga0310912_10660088All Organisms → cellular organisms → Bacteria → Acidobacteria812Open in IMG/M
3300031947|Ga0310909_11395073Not Available561Open in IMG/M
3300032205|Ga0307472_102654800All Organisms → cellular organisms → Bacteria → Acidobacteria511Open in IMG/M
3300032261|Ga0306920_101571478All Organisms → cellular organisms → Bacteria → Acidobacteria937Open in IMG/M
3300034664|Ga0314786_116838All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil31.50%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil11.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil9.45%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.30%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.51%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.72%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.15%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.15%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.36%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.36%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere2.36%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.36%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.57%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.79%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.79%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.79%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.79%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004801Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011441Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2EnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026326Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026343Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300026537Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300034664Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F14TC_10083589023300000559SoilVKRNVSFQSVCPGCNAQLRIEFVREPTQTGAMWTVDCPACGTSKMIPSEPVRIYYQKDGAWIESLPHTSHFG*
JGI25383J37093_1002802423300002560Grasslands SoilLKRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKLIPDDPVKIYYQKDGNWIEARPKSQHFG*
JGI25382J43887_1012382223300002908Grasslands SoilLKRNVLFPCICQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDEPVKIFYEKDGSWIEREPKSQHFA*
Ga0058899_1208860013300004631Forest SoilVKRNVLFQCTCQGCNTKLKIECVTEPTLTGAGGTVDCPVCGASKMIPDEPVRISYQKDGAWVESIPHTSYTR
Ga0058860_1164098413300004801Host-AssociatedVLHQCSCPGCHASLKIEFMTEPVRTGAMWTVDCPVCGTSKMVPDEPVRIAYAKGAEWIESAPHTSHFG*
Ga0066674_1008301323300005166SoilLKRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKLIPDDPIKIYYQKDGNWIEARPKSQHFG*
Ga0066672_1051203723300005167SoilLKRNVLFQCMCQGCNARLKIEFISEPARTGAMWTVDCPVCGTSKMIPDEPVKIYYEKDGSWLEARPKSQHFG*
Ga0066683_1052531413300005172SoilVEVQLKRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDDPVKIYYQKDGDWIEARPKSQHFG*
Ga0066685_1012321323300005180SoilLKRNVLFQCLCQGCNARLKIEFISEPARTGAMWTVDCPVCGTSKMIPDEPVKIYYEKDGSWLEARPKSQHFG*
Ga0066685_1028120923300005180SoilVKRNVLFQATCAGCNTRLKIEFITEPMRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFT*
Ga0066671_1005019723300005184SoilVKRNVLFQATCAGCNTRLKIEFITEPTRTGAMYTVDCPVSGTSKMVPDEPVKIYYLKDGNWVESKPKTQHFT*
Ga0066671_1025662513300005184SoilLKRSFLFPCICQGCNARLKIELMSEPMRTGAMCTVDCPVCGTSKMIPDEPVKIFYEKDGQWIEAAPRTQHFK*
Ga0066676_1083204023300005186SoilVKRSVLFQCVCQGCNAQLRIEFITEPVRTGAMWTVDCPVCGTSKIVPNDSVRIYHQKQGDWIESLPHTSHFG*
Ga0066675_1115267313300005187SoilVKRNVFFTCGCQACNARLKIEFISEPIRTGAMWTVDCPVCGASKMVPDQPVRIYHQKDGAWVESVPRTNY*
Ga0066388_10279582113300005332Tropical Forest SoilVCPACNHALKIEFITEPVRTGSMWTVDCPVCGTSKMIPDEPVRIFYQKDGSWIESVPRTNYFG*
Ga0068869_10130373823300005334Miscanthus RhizosphereMELNLKRNVQVRCVCQGCNAKLKIEFITEPMRTGAGGTVDCPACGTSKMIPDEPVRIFYEKDGTWLESLPHTNYLRVRS*
Ga0070708_10139412513300005445Corn, Switchgrass And Miscanthus RhizosphereVKRNVSFPATCAGCNTRLKIEFITEPIRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFSAG*
Ga0066686_1038492623300005446SoilLKRNVLFQCLCQGCNARLKIEFISEPARTGAMWTVDCPVCGTSKMIPDEPVKIYYEKDGSWLEARPKSQHF
Ga0066682_1063118223300005450SoilSHECACAGCSARLKIEFVTEPMRTGAMGTVDCPVCGTSKMVPDEPARIFYYKDNNWLESRPKTQHAW*
Ga0066682_1069428223300005450SoilVKRNVTIPCVCPGCNAKLKIEMITEPIRTGAGGTVDCPACGTSKLIPGEPVRIYYEKDGTWVESQPHTSYMRK*
Ga0066687_1011887923300005454SoilVKRNVLFQATCAGCNTRLKIEFITEPTRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFT*
Ga0070681_1063876523300005458Corn RhizosphereLKRNVFFHTICPGCNSRLKIDFVTEPVRTGAMWTVDCPVCGTSKMVPDEPVRISYQKDGKWVESQPHTKYAARG*
Ga0070707_10010792223300005468Corn, Switchgrass And Miscanthus RhizosphereVKRNVSFQCICPGCNARLKIEFITEPIRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFSAG*
Ga0070697_10067648023300005536Corn, Switchgrass And Miscanthus RhizosphereVKRNVLFQATCAGCNTRLKIEFITEPMRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFSAG
Ga0070704_10156176113300005549Corn, Switchgrass And Miscanthus RhizosphereMKRNFATHCYCSGCNSRLKIEFVTEPIKTGAMWTVDCPACGTSKMVNDEPVRIHFEKDGKWTESPPHTQYSA*
Ga0066701_1010227423300005552SoilLKRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKKIPDDPVKIYYQKDGNWIEARPKSQHFG*
Ga0066695_1029675423300005553SoilLKRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDDPVKIYYQKDGDWIEARPKSQHFG*
Ga0066695_1056003513300005553SoilLKRNVLFQCICQGCNARLKIEFISEPTRTGAMWTVDCPVCGTSKMIPDEPVKIFYEKDGSWLEARP
Ga0066692_1020870533300005555SoilVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKLIPDDPVKIYYQKDGNWIEARPKSQHFG*
Ga0066692_1083580723300005555SoilVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKKIPDDPVKIYYQKDGNWIEARPKSQHFG*
Ga0066704_1035851613300005557SoilCQGCNARLKIEFISEPARTGAMWTVDCPVCGTSKMIPDEPVKIYYEKDGSWLEARPKSQHFG*
Ga0066698_1016073223300005558SoilLKRNVLFQCICQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDEPVKIYYEKD
Ga0066698_1084543423300005558SoilRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTGKMIPDDPVKIYYQKDGNWIEARPKSQHFG*
Ga0066700_1084476713300005559SoilCAGCNTRLKIEFITEPMRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVEGKPKTQHFT*
Ga0066703_1017367113300005568SoilLKRNVLFQCMCQGCNARLKIEFISEPARTGAMWTVDCPVCGTSKMIPDEPVKIYYEKDGSWLEARPKSQHFG
Ga0066691_1003329733300005586SoilLKRNVLFQCSCQGCNARLKIEFIGEPVRTGAMWTVDCPVCGTSKLIPDDPVKIYYQKDGNWIEARPKSQHFG*
Ga0070763_1047429523300005610SoilVKRNVLFQCTCQGCNTKLKIECVTEPTLTGAGGTVDCPVCGASKMIPDEPVRISYQKDGAWVESIPHTSYTRGNV*
Ga0066903_10867966723300005764Tropical Forest SoilVKRNVSFPCVCQGCNARLKIEFISEPLRTGAMWTVDCPVCGTSKMIPDEPVGIAYLKDGSWVEAQPRT
Ga0066656_1052099233300006034SoilNARLKIEFVTEPTRTGAMSTVDCPACGTSKVVPDTPVRIFYLKDHNWIEAGPKTQHAG*
Ga0066658_1024081223300006794SoilVKRNVSFPSTCPGCNTRLKIEFITEPIRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFGNSTSDA*
Ga0066665_1011739323300006796SoilLFPCICQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPEEPVKIFYEKDGSWIEREPKSQHFA*
Ga0066665_1165727023300006796SoilVKRNVSFPSTCPGCNTRLKIEFITEPIRTGAMYTVDCPVCGTSKLVPNEPVKIYYQKDGNWVESKPKTQHFGNS
Ga0066659_1046203523300006797SoilLKRNVLFQATCPGCGARLKIEFITEPARTGAMWTVDCPKCGTSKMIPDEPVKIFYEKDGTWIESAPKTQHFV*
Ga0066659_1047300323300006797SoilVKRNVSFPSTCPGCNTRLKIEFITEPIRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFGNSTSEV*
Ga0075421_10171730623300006845Populus RhizosphereMKRNVLFQCVCQGCNARLKIEFVTEPIRTGAMWTVDCPVCGASKMVPDEPVRVFHSKDGEWMESVPHTSY*
Ga0075421_10209591223300006845Populus RhizosphereGCNNSLKIEFITEPIRTGSMWTVDCPVCGTSKMVPDEPVRIFYQKDGSWIESVPHTSYFS
Ga0075425_10301153423300006854Populus RhizosphereVKRNVSFQATCAGCNTRLKIEFITEPIRTGAMHTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFSAG*
Ga0075434_10128166723300006871Populus RhizosphereVKRNVSFPATCAGCNTRLKIEFITEPMRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWLESKPKTQHFSAG*
Ga0075426_1058847413300006903Populus RhizosphereCPGCNARLKIDFITEPIRTGAMWTVDCPVCGMSKMIPDEPIGIAYLKDESWVESQPRTNYFRNSLSG*
Ga0075424_10005566523300006904Populus RhizosphereVKRNVSFPATCAGCNARLKIEFITEPMRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFSAG*
Ga0075436_10148657023300006914Populus RhizosphereLKRNVSFQSGCPGCNARLKIEFITEPTRTGAMWTVDCPRCGTSKMVPDEPVKIYYEKDGSWIESTPKTQHFA*
Ga0079219_1149734213300006954Agricultural SoilLKRNVLFQCVCQGCNARLKIEFITEPIRTGAMFTVDCPQCGTSKMVPDDPVKIFYEKDGKWIECAPKTQHFA*
Ga0079218_1180490723300007004Agricultural SoilYLKRNVLFECGCPGCNTRLKIEFVTEPMRTGAMSTVDCPVCGTSKMIPSEPLRIYYQKDGNWLEARPKSQHFA*
Ga0099791_1067643923300007255Vadose Zone SoilLKRNVLFQCMCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDEAVKIFYEKDGNWIEARPR
Ga0066710_10120097413300009012Grasslands SoilLKRNVLFQCICQGCNARLKIEFISEPTRTGAMWTVDCPVCGTSKMIPDEPVKIFYEKDGSWLEARPK
Ga0066710_10148624013300009012Grasslands SoilLKRNVLFQCLCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDEPVKIYYEKNGNWLEA
Ga0066710_10190996013300009012Grasslands SoilVKRNVSFPSTCPGCNTRLKIEFITEPIRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFT
Ga0066710_10455764013300009012Grasslands SoilLVFREVSLKRNVLFPATCPGCGARLKIEFITEPARTGAMWTVDCPKCGTSKLIPDEPVKIFYEKDGNWIESTPKTQHFA
Ga0099827_1152876423300009090Vadose Zone SoilVKRNVLFQCTCPGCNARLKIEFITEPIRTGAMHTVDCPVCGTSKMIPDEPVKIYYQKDGN
Ga0066709_10001484353300009137Grasslands SoilVKRNVLFQCVCQGCNAQLRIEFITEPVRTGAMWTVDCPVCGTSKIVPNDPVRIYHQKQGDWIESLPHTSHFG*
Ga0066709_10087624923300009137Grasslands SoilMCQGCNAPLKIEFISEPARTGAMWTVDCPVCGTSKMIPDEPVKIYYEKDGSWLEARPKSQHFG*
Ga0066709_10096502523300009137Grasslands SoilVKRNVLFQATCAGCNTRLKIEFITEPTRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPETQHFT*
Ga0105242_1197434113300009176Miscanthus RhizosphereVKRNVLFQCSCPGCNARLKIEFITDPARTGSGGTVDCPVCGASKMIPAEPVRIFFEKDGNWVESLPHTSHLG*
Ga0126382_1006023833300010047Tropical Forest SoilLKRNVLLQCLCQGCNAPLKVEFISEPLRTGAIWTVDFPVCGTSKMIPNDPVKIYYQKDGKWIEARPKSQHFG*
Ga0134088_1002717923300010304Grasslands SoilLKRNVLFQSICQGCNARLKIEFISEPTRTGAMWTVDCPVCGTSKMIPDEPVKIYYEKDGSWLEATPKSQHFG*
Ga0134088_1023448723300010304Grasslands SoilVCAGCNARLKIEFVTEPTRTGAMSTVDCPACGTSKVVPDTRVRIFYLKDHNWIEAGPKTQHAG*
Ga0134080_1059321113300010333Grasslands SoilKEMKDRFMSTFHKTELKYRRSYNTAEVQLKRNVLFQCICQGCNARLKIEFISEPARTGAMWTVDCPVCGTSKMIPDEPVKIYYEKDGSWLEARPKSQHFG*
Ga0126379_1375592213300010366Tropical Forest SoilRNVLFPCTCQGCGAKLKIEFVTEPVRTGAMWTVDCPVCGTSKMIPDEPVKIFYEKDGSWIESRPKTQHFSAG*
Ga0126381_10135755933300010376Tropical Forest SoilLRRNVTFNSICQGCNARLKIEFITEPIRTGAMWTVDCPACGTSKMVVDEPVRIAYEKDGKWVDSLPHTRYSRV*
Ga0105246_1032461033300011119Miscanthus RhizosphereMELNLKRNVQVRCVCQGCNAKLKIEFITEPMRTGAGGTVDCPACGTSKMIPDEPVRIFYEKDGTWLESLPH
Ga0150983_1517386213300011120Forest SoilVKRNVLFQCTCQGCNTTLKIECVTEPTLTGAGGTVDCPVCGASKMIPDEPVRISYQKDGAWVESTPHTSYTR
Ga0150983_1672806423300011120Forest SoilLKRNVVFPATCQGCGARLKIEFITEPVRTGAMWTVDCPKCGTSKMVPDEPVKIFYLHDGGWIESTPKTQYSA*
Ga0137392_1144621523300011269Vadose Zone SoilICPGCNARLKVEFTDPMRTGAMGTVDCPVCGTSKMVPGEPVKIYYEKDGNWIECPPKTQHFA*
Ga0137452_102372833300011441SoilMLCICPGCSARLKIEFITEPIRTGAMWTVDCPVCGTSKMVTDEPQRMFHSNNGEWIESAPHTSYSR
Ga0137381_1162142223300012207Vadose Zone SoilLKGNVLLQCLCQGCNAPLKVEFISEPVRTGAMWTVDCPVCGTSKMIPNDPVKIYYQKDRKWIEARPKSQHFG*
Ga0150985_10019883013300012212Avena Fatua RhizosphereLKRNVFFNAFCQGCNARLRIEFVTEPVRTGAMWTVDCPACGTSKMVPDEPVRIGYHKDGNWIESQPHTMY*
Ga0150985_10230383723300012212Avena Fatua RhizosphereMLKRNVFFHSICQGCNARLRIEFITEPHSTGAMWTVDCPVCGTSKMVPDEPVTIAHEKDGNWVVGIPHTRYTK*
Ga0150985_10277815723300012212Avena Fatua RhizosphereMRTNALFPCFCQGCGAALKIEFVTEPIRTGAMWTVDCPLCGTSKMVPDEPVRIFHAKDGGWVESLPHSSHFGNSGTIA*
Ga0137371_1058718623300012356Vadose Zone SoilNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKKIPDDPVKIYYQKDGNWIEARPKSQHFG*
Ga0137385_1024922113300012359Vadose Zone SoilVKRNVLFQCVCQGCNARLKIEFITEPMRTGAMSTVDCPVCGTSKMIPDEPVRIYYEKDGGWVESQPHTSYKRE*
Ga0137361_1052008623300012362Vadose Zone SoilLKRNVLFPCICQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDEAVKIFYEKDGSWIEARPRSQHFA*
Ga0150984_11105044523300012469Avena Fatua RhizosphereMLKRNVFFHSICQGCNARLRIEFITEPHSTGAMWTVDCPVCGTSKMVPDEPVTIAHEKDGNWVEGIPHTRYTK*
Ga0150984_11149677123300012469Avena Fatua RhizosphereEPVPTLRIIQTEVCLKRNVFFNSFCQGCNARLRIEFVTEPVRTGAMWTVDCPACGTSKMVPDEPVRIGYHKDGNWIESQPHTRY*
Ga0150984_11535112423300012469Avena Fatua RhizosphereLKRNVFFNSFCQGCNARLRIEFVTEPVRTGAMWTVDCPACGTSKMVPDEPVRIGYHKDGNWIESQPHTQY*
Ga0137358_1059219023300012582Vadose Zone SoilLKRNVLFPCICQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPNEAVKIFYEKDGSWIEARPRSQHFA*
Ga0126375_1004553523300012948Tropical Forest SoilLKRNVLLQCLCQGCNAPLKVEFISEPVRTGAMWTVDCPVCGTSKMIPNDPVKIYYQKDGKWIEARPKSQHFG*
Ga0132258_1075147013300015371Arabidopsis RhizosphereLFWLEIPLKRNFPYTCTCAGCSGRLKIEFLSEPIRTGSMWTVDCPACGMSKMVPDEPVRIFLLKDASWIEFTPKTQHVL*
Ga0182036_1036536223300016270SoilLKRNVIFNSICQGCNARLKIEFVTDPVRTGAMWTVDCPVCGTSKMVVDEPVGIAYEKNGSWVESKPHTRY
Ga0182032_1152612213300016357SoilLKRNVIFNSICQGCNARLKIEFVTEPVRTGAMWTVDCPVCGTSKMVVDEPVRIAYEKNGSWVESKPHTRY
Ga0182037_1033759713300016404SoilTAEVELKRNVLVPCRCQGCAAKLKIEFVTEPVRTGAMWTVDCPVCGTSKMIPDEPVKIFYEKDGSWIESRPKTQHFSTG
Ga0182037_1163688623300016404SoilLKRNVVFGSICQGCNARLRIEFITEPVRTGSMWTVDCPVCGTSKMVVDEPVGIAYEKDGSWVESKPHTKY
Ga0182039_1021479223300016422SoilLKRNVIFNSICQGCNARLKIEFVTDPVRTGAMWTVDCPVCGTSKMVVDEPVGISYEKNGNWVESKPHTRY
Ga0182039_1159315713300016422SoilILSLKWGEYITGEVELKRNVLVPCRCQGCAAKLKIEFVTEPVRTGAMWTVDCPVCGTSKMIPDEPVKIFYEKDGSWIESRPKTQHFSAG
Ga0182038_1057150723300016445SoilLKRNVIFNSICQGCNARLKIEFVTEPVRTGAMWTVDCPVCGTSKMVVDEPVGIAYEKNGSWVESKPH
Ga0134069_127772013300017654Grasslands SoilSYNTAEVQLKRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDDPVKIYYQKDGEWIEARPKSQHFG
Ga0066667_1029805513300018433Grasslands SoilLKRNVLFQCMCQGCNAPLKIEFISEPARTGAMWTVDCPVCGTSKMIPDEPVKIYYEKDGSWLEARPKSQHFG
Ga0066667_1077057823300018433Grasslands SoilVKRNVLFQATCAGCNTRLKIEFITEPTRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPK
Ga0066667_1108187623300018433Grasslands SoilLKRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKLIPDDPIKIYYQKDGNWIEARPKSQHFG
Ga0066662_1021069723300018468Grasslands SoilLKRNVLFPCICQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDEPVKIFYEKDGSWIEREPKSQHFA
Ga0066662_1024053733300018468Grasslands SoilLKRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKLIPDDPVKIYYQKDGNWIEARPKSQHFG
Ga0210400_1065497913300021170SoilHNVLFPCICPGCNARLKVEFTEPMRTGAMGTVDCPVCGTSKMVPGEPVKIYYEKDGNWIECPPKTQHFA
Ga0222729_102335313300022507SoilVKRNVVFQCACPGCNTKLKIECITEPTRTGAGGTVDCPVCGASKMIPDEPVRISYEKDGN
Ga0207646_1001091523300025922Corn, Switchgrass And Miscanthus RhizosphereVKRNVSFPATCAGCNTRLKIEFITEPIRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFSAG
Ga0207646_1022699123300025922Corn, Switchgrass And Miscanthus RhizosphereVKRNVSFQCICPGCNARLKIEFITEPIRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFSAG
Ga0209235_101465363300026296Grasslands SoilCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKLIPDDPIKIYYQKDGNWIEARPKSQHFG
Ga0209687_115502923300026322SoilVKRNVLFQATCAGCNTRLKIEFITEPTRTGAMYTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFT
Ga0209152_1030928113300026325SoilLKWGEYNTREVELKRNVLFPCVCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDEPVKIFYEKDGSWIEREPKSQHFA
Ga0209801_101565063300026326SoilLKRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMVPDEPVKIYYQKDGNWVESKPKTQHFGNSTSEV
Ga0209375_115951523300026329SoilTNFGFRKSAIRFMSTCHRTELKYWRSYNTAEVQLKRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDDPVKIYYQKDGEWIEARPKSQHFG
Ga0209159_109799323300026343SoilLKRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDDPVKIYYQKDGDWIEARPKSQHFG
Ga0209058_100200813300026536SoilLKRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDDPVKIYYQKDGEWIEARPKSQHF
Ga0209058_115310323300026536SoilLKRNVLFQCICQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDEPVKIYYEKDGSWLEARPKSQHFG
Ga0209157_122828223300026537SoilCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDDPVKIYYEKDGEWIEARPKSQHFG
Ga0209056_1013255213300026538SoilLKRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDDPVKIYYQKDGEWIEARPKSQHFG
Ga0209056_1063733413300026538SoilRNVLFQCSCQGCNARLKIEFISEPVRTGAMWTVDCPVCGTSKKIPDDPVKIYYQKDGNWIEARPKSQHFG
Ga0170834_10059045213300031057Forest SoilLKRNVFFNSFCQGCNARLRIEFVTEPVRTGAMWTVDCPVCGTSKMVPDEPVRIGYHKDGNWIDSLPHTR
Ga0170824_11089013713300031231Forest SoilLKRNVFFNSICPGCNARLRIEFVTEPVRTGAMWTVDCPACGTSKMVPDEPVRIAYHKDGNWIDSLPHTR
Ga0170819_1228705613300031469Forest SoilLKRNVFFNSICPGCNARLRIEFVTEPVRTGAMWTVDCPACGTSKMVPDEPVRIAYHKDGNWIDSLPHT
Ga0306917_1087834423300031719SoilLKRNVIFNSICQGCNARLKIEFVTEPVRTGAMWTVDCPVCGTSKMVVDEPVGIAYEKNGSWVESKPHTRY
Ga0306921_1119760013300031912SoilLKRNVIFNSICQGCNARLKIEFVTEPVRTGAMWTVDCPVCGTSKMVVDEPVGISYEKNGSWVESKPHT
Ga0306921_1123581013300031912SoilLKRNVVFSSICPGCNSRLKIEFITEPVRTGAMWTVDCPVCGTSKMVVDEPVGIAYEKNGSWVESKPHTKY
Ga0306921_1152475213300031912SoilVRSAIILSLKWGEYITAEVELKRNVLVPCRCQGCAAKLKIEFVTEPVRTGAMWTVDCPVCGTSKMIPDEPVKIFYEKDGSWIESRPKTQHFSAG
Ga0310912_1066008823300031941SoilLKRNVIFNSICQGCNARLKIEFVTEPVRTGAMWTVDCPVCGTSKMVVDEPVGISYEKNGSWVESKPHTRY
Ga0310909_1139507323300031947SoilLKRNVIFNSICQGCNARLKIEFVTEPVRTGAMWTVDCPVCGTSKMVVDEPVGISYEKN
Ga0307472_10265480013300032205Hardwood Forest SoilTELKYWRSYYTAEVQLKRNVLFQCSCQGCNSRLKIEFISEPVRTGAMWTVDCPVCGTSKMIPDDPVKIYYQKDEDLIEARPKSQHFG
Ga0306920_10157147813300032261SoilSICQGCNARLKIEFVTEPVRTGAMWTVDCPVCGTSKMVVDEPVGISYEKNGSWVESKPHTRY
Ga0314786_116838_230_4483300034664SoilMKRNFLLNSVCPGCNARLRIEFVTEPVRTGAMWTVDCPVCGTSKIVPDDPVRIAYAKGAEWIESTPHTSHYG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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