Metagenome / Metatranscriptome Family F065659

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065659
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	108 residues
Representative Sequence	VSNGTARLHLTEAGTIDNTFFFGPGTEFSSATFDITWTPTGKVQHFRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP
Number of Associated Samples	98
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	25.20 %
% of genes near scaffold ends (potentially truncated)	35.43 %
% of genes from short scaffolds (< 2000 bps)	84.25 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.850 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (23.622 % of family members)
Environment Ontology (ENVO)	Unclassified (40.157 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.819 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 46.67% Coil/Unstructured: 53.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF01527	HTH_Tnp_1	3.94
PF02954	HTH_8	2.36
PF13276	HTH_21	1.57
PF13472	Lipase_GDSL_2	0.79
PF02371	Transposase_20	0.79
PF12728	HTH_17	0.79
PF01740	STAS	0.79
PF12146	Hydrolase_4	0.79
PF02780	Transketolase_C	0.79
PF13372	Alginate_exp	0.79
PF01867	Cas_Cas1	0.79
PF03023	MurJ	0.79
PF13414	TPR_11	0.79
PF13229	Beta_helix	0.79
PF13751	DDE_Tnp_1_6	0.79
PF09723	Zn-ribbon_8	0.79
PF13424	TPR_12	0.79
PF00881	Nitroreductase	0.79
PF00202	Aminotran_3	0.79
PF07366	SnoaL	0.79
PF13924	Lipocalin_5	0.79
PF14014	DUF4230	0.79
PF13173	AAA_14	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	0.79
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1518	CRISPR-Cas system-associated integrase Cas1	Defense mechanisms [V]	0.79
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	0.79
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.85 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.85 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.85 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	26.77 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.75 %
Unclassified	root	N/A	3.15 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26.77 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.51 %
Unclassified	root	N/A	3.15 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.36 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.51 %
Unclassified	root	N/A	3.15 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.57 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.79 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	26.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.51 %
Unclassified	root	N/A	3.15 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.57 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.79 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.51 %
Unclassified	root	N/A	3.15 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.79 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.79 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	26.77 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.51 %
Unclassified	root	N/A	3.15 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.79 %
Acidobacteriia bacterium SbA2	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	0.79 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100801189	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100801617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1056	Open in IMG/M
3300001867\|JGI12627J18819_10067442	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300004139\|Ga0058897_11118111	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300005176\|Ga0066679_10199351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1275	Open in IMG/M
3300005176\|Ga0066679_10663415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300005332\|Ga0066388_101679340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1122	Open in IMG/M
3300005436\|Ga0070713_100054766	All Organisms → cellular organisms → Bacteria	3311	Open in IMG/M
3300005436\|Ga0070713_101386333	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300005445\|Ga0070708_100010274	All Organisms → cellular organisms → Bacteria	7580	Open in IMG/M
3300005536\|Ga0070697_100678886	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300005542\|Ga0070732_10728304	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005559\|Ga0066700_10647443	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300005568\|Ga0066703_10208814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1186	Open in IMG/M
3300005764\|Ga0066903_101493318	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300005764\|Ga0066903_105311816	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300005921\|Ga0070766_10813335	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300006028\|Ga0070717_10802973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300006755\|Ga0079222_10144594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1340	Open in IMG/M
3300006755\|Ga0079222_12278885	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300006804\|Ga0079221_10045199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1947	Open in IMG/M
3300006903\|Ga0075426_10000437	All Organisms → cellular organisms → Bacteria	28918	Open in IMG/M
3300006904\|Ga0075424_100831441	Not Available	985	Open in IMG/M
3300007258\|Ga0099793_10225964	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	901	Open in IMG/M
3300009012\|Ga0066710_104264609	Not Available	534	Open in IMG/M
3300009088\|Ga0099830_11130223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300009089\|Ga0099828_10152379	All Organisms → cellular organisms → Bacteria → Acidobacteria	2043	Open in IMG/M
3300009090\|Ga0099827_10478504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1069	Open in IMG/M
3300009090\|Ga0099827_11973326	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300010043\|Ga0126380_11805715	Not Available	553	Open in IMG/M
3300010048\|Ga0126373_10173961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2066	Open in IMG/M
3300010048\|Ga0126373_10200378	All Organisms → cellular organisms → Bacteria	1934	Open in IMG/M
3300010048\|Ga0126373_10671176	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300010358\|Ga0126370_10140079	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium SbA2	1747	Open in IMG/M
3300010358\|Ga0126370_10354287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1187	Open in IMG/M
3300010358\|Ga0126370_11031284	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300010360\|Ga0126372_11303918	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300010361\|Ga0126378_10041457	All Organisms → cellular organisms → Bacteria	4221	Open in IMG/M
3300010361\|Ga0126378_10334969	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300010361\|Ga0126378_11497599	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300010366\|Ga0126379_11489739	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300010376\|Ga0126381_101876186	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300010398\|Ga0126383_10041796	All Organisms → cellular organisms → Bacteria	3746	Open in IMG/M
3300011120\|Ga0150983_11259739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	883	Open in IMG/M
3300011120\|Ga0150983_15999954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1754	Open in IMG/M
3300011270\|Ga0137391_10541462	All Organisms → cellular organisms → Bacteria → Acidobacteria	982	Open in IMG/M
3300011271\|Ga0137393_11065555	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300012199\|Ga0137383_10201276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1459	Open in IMG/M
3300012200\|Ga0137382_10237299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1261	Open in IMG/M
3300012203\|Ga0137399_10477471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1044	Open in IMG/M
3300012209\|Ga0137379_10409958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1264	Open in IMG/M
3300012210\|Ga0137378_10735110	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300012211\|Ga0137377_10206490	All Organisms → cellular organisms → Bacteria	1886	Open in IMG/M
3300012211\|Ga0137377_10703599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	945	Open in IMG/M
3300012349\|Ga0137387_10527214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	857	Open in IMG/M
3300012351\|Ga0137386_10869367	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300012361\|Ga0137360_10305867	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300012917\|Ga0137395_10542258	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300012923\|Ga0137359_10871468	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300012923\|Ga0137359_10993748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300012927\|Ga0137416_11241983	Not Available	672	Open in IMG/M
3300012930\|Ga0137407_10393558	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300012948\|Ga0126375_10865802	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300012971\|Ga0126369_10075236	All Organisms → cellular organisms → Bacteria	2976	Open in IMG/M
3300012971\|Ga0126369_10274492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1673	Open in IMG/M
3300012971\|Ga0126369_12042281	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300014154\|Ga0134075_10158008	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300015053\|Ga0137405_1055076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	804	Open in IMG/M
3300018468\|Ga0066662_10612787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1021	Open in IMG/M
3300019888\|Ga0193751_1029360	All Organisms → cellular organisms → Bacteria	2596	Open in IMG/M
3300020199\|Ga0179592_10045034	All Organisms → cellular organisms → Bacteria	2003	Open in IMG/M
3300020579\|Ga0210407_10020840	All Organisms → cellular organisms → Bacteria	4869	Open in IMG/M
3300020580\|Ga0210403_11010393	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300021088\|Ga0210404_10064903	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300021170\|Ga0210400_11322098	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300021171\|Ga0210405_10121793	All Organisms → cellular organisms → Bacteria → Acidobacteria	2060	Open in IMG/M
3300021178\|Ga0210408_10296754	All Organisms → cellular organisms → Bacteria → Acidobacteria	1288	Open in IMG/M
3300021180\|Ga0210396_10298301	All Organisms → cellular organisms → Bacteria → Acidobacteria	1427	Open in IMG/M
3300021479\|Ga0210410_10047517	All Organisms → cellular organisms → Bacteria	3735	Open in IMG/M
3300021479\|Ga0210410_10844517	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300021560\|Ga0126371_10724346	All Organisms → cellular organisms → Bacteria	1142	Open in IMG/M
3300021560\|Ga0126371_11549827	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300022506\|Ga0242648_1077334	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300022531\|Ga0242660_1027774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1118	Open in IMG/M
3300022717\|Ga0242661_1009867	All Organisms → cellular organisms → Bacteria → Acidobacteria	1354	Open in IMG/M
3300022726\|Ga0242654_10040005	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300025911\|Ga0207654_10849963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300025921\|Ga0207652_10540122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1048	Open in IMG/M
3300025929\|Ga0207664_10469983	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300026498\|Ga0257156_1073101	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300026499\|Ga0257181_1001335	All Organisms → cellular organisms → Bacteria	2223	Open in IMG/M
3300026557\|Ga0179587_10014711	All Organisms → cellular organisms → Bacteria	4125	Open in IMG/M
3300027266\|Ga0209215_1016592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	933	Open in IMG/M
3300027326\|Ga0209731_1054758	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300027502\|Ga0209622_1029222	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300027725\|Ga0209178_1040364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1483	Open in IMG/M
3300027846\|Ga0209180_10317750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300027874\|Ga0209465_10060857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1819	Open in IMG/M
3300027882\|Ga0209590_10487864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300027903\|Ga0209488_10065158	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2696	Open in IMG/M
3300027903\|Ga0209488_10778028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300028536\|Ga0137415_11056957	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300030969\|Ga0075394_10106026	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300031057\|Ga0170834_107833854	All Organisms → cellular organisms → Bacteria → Acidobacteria	2140	Open in IMG/M
3300031057\|Ga0170834_110776705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1103	Open in IMG/M
3300031128\|Ga0170823_10469225	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300031231\|Ga0170824_106111873	All Organisms → cellular organisms → Bacteria	1363	Open in IMG/M
3300031231\|Ga0170824_115181216	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300031446\|Ga0170820_11096503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300031446\|Ga0170820_14327256	All Organisms → cellular organisms → Bacteria → Acidobacteria	654	Open in IMG/M
3300031469\|Ga0170819_15641793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1197	Open in IMG/M
3300031469\|Ga0170819_17666592	All Organisms → cellular organisms → Bacteria → Acidobacteria	911	Open in IMG/M
3300031715\|Ga0307476_11087187	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300031718\|Ga0307474_10402437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1065	Open in IMG/M
3300031718\|Ga0307474_10826283	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300031740\|Ga0307468_100243461	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300031754\|Ga0307475_10078906	All Organisms → cellular organisms → Bacteria	2534	Open in IMG/M
3300031754\|Ga0307475_10193343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1625	Open in IMG/M
3300031754\|Ga0307475_10207353	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1568	Open in IMG/M
3300031754\|Ga0307475_10302380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1284	Open in IMG/M
3300031820\|Ga0307473_10228760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1125	Open in IMG/M
3300031823\|Ga0307478_10550823	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300031962\|Ga0307479_10106724	All Organisms → cellular organisms → Bacteria	2724	Open in IMG/M
3300032174\|Ga0307470_10335711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1042	Open in IMG/M
3300032180\|Ga0307471_100080929	All Organisms → cellular organisms → Bacteria	2857	Open in IMG/M
3300032180\|Ga0307471_103709548	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300032261\|Ga0306920_103315298	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.64%
Host-Associated	Host-Associated	2.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.64%
Plants	Host-Associated → Plants	2.36%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.64%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.36%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.68%
Loam	Environmental → Terrestrial → Soil → Loam	14.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.36%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.51%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.36%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.75%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	11.02%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.57%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027326	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1008011893	3300000364	Soil	VGTIDNTFFFGPGTEYSSATFDITWTPMGKVLHFRPGSSDPTDPSNFSAEIRFATATGSFTVLQNGVTYTITNASSAGVFAEMGRERNGSFLHDD*
INPhiseqgaiiFebDRAFT_1008016172	3300000364	Soil	VSDRTARLHLTEEGTIDNTFFGGPGTDYASATFDITWTPMGKVQHFRPGSSDPTDPSNFAAEIRFATATGSFTVLQNGVTYTITNASSAGVFAEMGTERNGSFLP*
JGI12627J18819_100674422	3300001867	Forest Soil	VSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDLTWTPMGKVQHFRPGSSDPTDPSNFAAEIRFATATGSFTVLQNGVAYTITNASSAGVFAEMGTERNGSFLP*
Ga0058897_111181113	3300004139	Forest Soil	LSAEGTAHLHLTEAATIDNTFIFGPGTEYSNATFDLTWTPSGEVQHFRPGSSNPTDPSDFAAEMRFATATGSFTVIRNGVTFTINNATSAGVFAEMGRERNGSFLDHD*
Ga0066679_101993511	3300005176	Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHFRPGSDDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0066679_106634152	3300005176	Soil	DNTFFFGPGTEFASATFDITWTPTGKVQHLRPGSSDPTDPSNFAADIRFATATGSFTVLQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0066388_1016793401	3300005332	Tropical Forest Soil	LFWIVAVPDYALFVSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVHHFRPGSSDPTDPSNFAAEMRFATATGSFTVAQNGVTYTINNASSAGVFAEMGTERNGSFLP*
Ga0070713_1000547663	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSNGTARLHLTEAGTIDNTFFFGPGTEFSSATFDITWTPTGKVQHFRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0070713_1013863331	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSNGTARLHLTEEGTIDNLFFGGPGIDYASATFDITWTPMGAVQHFRPGSSDPTDPSNFAAEIRFAIATGSFTVLQNGVIYTITNASSAGVFAEMGTERNGSFLP*
Ga0070708_1000102743	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSNQTASLHLTEEGTIDNTFFFGPGTEFASATFDITWTASGKVQHFRPGSSDPTDPSNFSAEIRSATATGSFTVLQNGVTFTINNASSEGVFAEMGTERNGSFLP*
Ga0070697_1006788862	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDVTWTPTGKVHHFRPGSDDPTDPSNFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0070732_107283042	3300005542	Surface Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDLTWTPMGKVQHFRPGSSDLTDPSNFAAEIRFATATGSFTVLQNGVAYTITNASSAGVFAEMGTERNGSFLP*
Ga0066700_106474432	3300005559	Soil	VSNRTARLHLTEESTIDNTFFFGPGTEFASATFDITWTPTGKVQHFRPGSDDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0066703_102088141	3300005568	Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVLQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0066903_1014933182	3300005764	Tropical Forest Soil	VSNGTARLHLTEAGTIDNTFFLGPGTDYASATFDVTWTPMDEVQHFRPGSSDPTDPSNFAAEIRFATATGSFVVLQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0066903_1053118161	3300005764	Tropical Forest Soil	HLTEAGTIDNTFFFGPGTEYSSATFDITWTPSGEVQHFRPGSSDPTDPSNFAADMRFATATGSFTVIQNGVTYTINNASSAGVFAEMGKERNGSLLHHE*
Ga0070766_108133351	3300005921	Soil	LSLSEEGSAHLHVTEAGTIDNTFIFGPGTEYSSATFDLTWTPSGEVQHFRPGSSNPTDPSNFAAEMRFATATGSFTVIRNGVTFTINNATSAGVFAEMGRERNGSFLDHD*
Ga0070717_108029731	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VSNGTARLHLTEEGTIDNLFFGGPGIDYASATFDITWTPMGAVQHFRPGPSDPTDPSNFAAEIRFAIATGSFTVLQNGVIYTITNASSAGVFAEMGTERNGSFLP*
Ga0079222_101445942	3300006755	Agricultural Soil	VSNGPARLHLTEAGTIDNTFFFGPGTDYASATFDITWTPTGKVQHFRPGSSDPTDPSNFAAEIQFAIATGSFTVVRDGVTFTINNASSADVFAEMGTERNGFFLP*
Ga0079222_122788851	3300006755	Agricultural Soil	VAVPDYALFVSDRTARLHLTEEGTIDNLFFGGPGIDYASATFDITWTPMGGVQHFRPGSSDPTDPSNFAAEIRLAAANGSFTVLSNGVTYTITN
Ga0079221_100451993	3300006804	Agricultural Soil	VSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDITWTPTGKVQHFRPGSSDPTDPSNFAAEIQFAIATGSFTVVRDGVTFTINNASSADVFAEMGTERNGFFLP*
Ga0075426_100004379	3300006903	Populus Rhizosphere	LYDPSSGAQVHDFNGHVSQSGLFWILAVPDYALFVSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDITWTPTGKVQHFRPGSSDPTDPSNFAAEIQFAIATGSFTVVRDGVTFTINNASSADVFAEMGTERNGFFLP*
Ga0075424_1008314411	3300006904	Populus Rhizosphere	GAQVHDFNGHVSQSGLFWILAVPDYALFVSNGTARLHLTEAGTIDNTFFFGPGTDYPSATFDITLTPTGKVQHFRPGSSDPTDPSNFAAEIQFAIATGSFTVVRDGVTFTINNASSADVFAEMGTERNGFFLP*
Ga0099793_102259642	3300007258	Vadose Zone Soil	DNTFFFGPGTEFASATFDITWTPTGKVHHFRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0066710_1042646092	3300009012	Grasslands Soil	LFVGNGTARLHLTEEGTIDNSFFFGPGTEFGSATFDITWTPTGNVQHFRPGSDDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0099830_111302232	3300009088	Vadose Zone Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFSSATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVMQNGVTFTINNA
Ga0099828_101523792	3300009089	Vadose Zone Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0099827_104785041	3300009090	Vadose Zone Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFSSATFDITWTPTGKVHHFRPGSPDPTDPSNFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0099827_119733262	3300009090	Vadose Zone Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGT
Ga0126380_118057151	3300010043	Tropical Forest Soil	LSLSEKGSARLHLTEAGTIDNTFFFGPGTEYSSATFDITWTPNGKVHHYRPGSPDPTDPSNFAAEIHFATATGSFTVIQNGVTFTINNASSAGVFAEMGTERNGSFVQ*
Ga0126373_101739611	3300010048	Tropical Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAPTIDNTFFFGPGTDYASATFDITWTPLGQVQHFRPGSSDPTDPSNFAAEIRFATATGSFTVLQNGVTFTINNASSAGV
Ga0126373_102003781	3300010048	Tropical Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDITWTPMGQVQHFRPGSPDPTDPSNFAAEIRFATATGSFTVLQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0126373_106711761	3300010048	Tropical Forest Soil	VSDQTARLHLTEAGTIDNIFIGGPGTEYASATFDITWTPMGKVQHFRPGSSDRTDPSNFAAEIRFATATGSFTVLQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0126370_101400791	3300010358	Tropical Forest Soil	GSGAQVHDFNGHISQSGLFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDVTWTPMGQVQHFRPRSYDPTDPSNFAAEIRFATATGSFTVLQNGVTYTINSASSAGVFAEMGTERNGSFLP*
Ga0126370_103542871	3300010358	Tropical Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFLGPGTDYASATFDVTWTPMDEVQHFRPGSSDPTDPSNFAAEIRFATATGSFVVLQNGVTFTINNASSAGVFAEMGT
Ga0126370_110312842	3300010358	Tropical Forest Soil	LFWIVAVPDYALFVSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVHHFRPGSSDPTDPSNFAAEMRFATATGSFTVAHNGVTYTINNASSAGVFAEMGTERNGSFLP*
Ga0126372_113039182	3300010360	Tropical Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNLFFFGPGTDYASATFDITWTPMGQVQHFRPGSSDPTDPSNFAAEIRFATATGSFTVLKNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0126378_100414574	3300010361	Tropical Forest Soil	VVSLSEDGSAHIHLTEAGTIDNTFFFGPGTDYSSATFDITWTPSGEVQHFRPGSSDPTDPSNFAADMRFATATGSFSVIQNGVTYTINNASSAGVFAEIGKERNGSLLHRD*
Ga0126378_103349691	3300010361	Tropical Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDITWTPMGQVQHFRPGSSDPTDPSNFAAEIRFATATGSFTVLKNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0126378_114975991	3300010361	Tropical Forest Soil	MDTFHNQVCSGLSRPDYALFVSNGTARLHLTEEGTIDNTAFLGPGTEYSSATFDITWTPTGKVHHFRPGSSDPTDPSNFAAEIRFATATGSFAVVQNGVTYTINSASSPGVFAEMGTERNGSFLP*
Ga0126379_114897391	3300010366	Tropical Forest Soil	PSSGAQVHDFNGHISQSGLFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFLGPGTDYASATFDVTWTPMDEVQHFRPGSSDPTDPSNFAAEIRFATATGSFVVLQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0126381_1018761862	3300010376	Tropical Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFLGPGTDYASATFDITWTPMDEVQHFRPGSSDPTDPSNFAAEIRFATATGSFVVLQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0126383_100417962	3300010398	Tropical Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFLGPGTDYASATFDVTWTPMDEVQHFRPGSSDPTDPSNFAAEIRFATATGSFVVLQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0150983_112597391	3300011120	Forest Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPAGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVLQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0150983_159999543	3300011120	Forest Soil	LSEEGSAHLHLTEAGTIDNTFIFGPGTEYSSATFDLTWTPSGEVQHFRPGSSNPTDPSNFAAEMRFATATGSFTVIRNGVTFTINNATSAGVFAEMGRERNGSFLDHD*
Ga0137391_105414622	3300011270	Vadose Zone Soil	GTIDNTFFFGPGTEFSSATFDITWTPTGKVHHFRPGSPDPTDPSNFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0137393_110655551	3300011271	Vadose Zone Soil	MVPTIAEHSCSYELTSIDLFDPSSGAQVHDFNGHISQSGLFWIIPVPDYALFVSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0137383_102012762	3300012199	Vadose Zone Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVVQNVVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0137382_102372992	3300012200	Vadose Zone Soil	VSNRTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHFRPGSDDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0137399_104774712	3300012203	Vadose Zone Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFSSATFDITWTPTGKVHHFRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0137379_104099581	3300012209	Vadose Zone Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGV
Ga0137378_107351101	3300012210	Vadose Zone Soil	VGNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0137377_102064901	3300012211	Vadose Zone Soil	LFWIIPVPDYALFVSNGTARLHLTEEGTIDNTFFFGPGTDYASATFDLTWTPMGKVQHFRPGSSDLTDPSNFAAEIRFATATGSFTVLQNGVTYTITNASSAGVFAEMGTERNGSFLP*
Ga0137377_107035992	3300012211	Vadose Zone Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVHHFRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0137387_105272142	3300012349	Vadose Zone Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINN
Ga0137386_108693671	3300012351	Vadose Zone Soil	DYALFVSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVHHFRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0137360_103058671	3300012361	Vadose Zone Soil	GTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVHHFRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0137395_105422582	3300012917	Vadose Zone Soil	VLFVSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVHHFRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0137359_108714682	3300012923	Vadose Zone Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTSKVQHIRPGSSDPADPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0137359_109937482	3300012923	Vadose Zone Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHFRPGSDDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASS
Ga0137416_112419831	3300012927	Vadose Zone Soil	PDYALFVSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0137407_103935582	3300012930	Vadose Zone Soil	VSNGTARLHLTEEGSIDNTFFFGPGTEFASATFDITWTPTGKVQHFRPGSDDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0126375_108658022	3300012948	Tropical Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDVTWTPMGQVQHFRPRSSDPTDPSNFAAEIRFATATGSFTVLQNGVTYTINNASSAGVFAEMGTERNGSFLP*
Ga0126369_100752362	3300012971	Tropical Forest Soil	VSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDITWTPMGKVQHFRPGSSDPEDPSNFAAEIRSATATGSFTVLLDGVTYTITNASSAGVFAEMGTERNGSFLP*
Ga0126369_102744923	3300012971	Tropical Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAATIDNTFFFGPGTDYASATFDITWTPMGQVQHFRPASSDPTDPSNFAAEIRFATATGSFTVLQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0126369_120422811	3300012971	Tropical Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFLGPGTDYASATFDVTWTPMDEVQHFRPGSSDPTDPSNFAAEIRFATATGSFVVLQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0134075_101580082	3300014154	Grasslands Soil	VSNGTARLHLTEEGTIDNPFFFGPGTEFASATFDVTWTPTGKVQHFRPGSDDPTDPSNFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0137405_10550761	3300015053	Vadose Zone Soil	VSNGTARLHLTEEGTIDNTFFFGPGTDFASATFDITWTPTGKVQHFRPGSDDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP*
Ga0066662_106127871	3300018468	Grasslands Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHFRPGSDDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0193751_10293603	3300019888	Soil	VSNGTARLHLTEAGTIDNTFFFGPGTEFSSATFDVTWTPTGKVHHFRPGSSDPTDPSNFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGLFLP
Ga0179592_100450345	3300020199	Vadose Zone Soil	VSSGTARLHLTEEGTIDNTFFFGPGTEFSSATFDITWTPTGKVHHFRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFL
Ga0210407_100208404	3300020579	Soil	VSNRTARLHLTEEGTIDNTFFFGPGTEFSSATFDITWTPTGKVHHFRPGSSDPTDPSDFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGLFLQ
Ga0210403_110103932	3300020580	Soil	LSAEGTAHLHLTEAATIDNTFIFGPGTEYSSATFDLTWTPSGEVQHFRPGSSNPTDPSDFAAEMRFATATGSFTVIRNGVTFTINNATSAGVFAEMGRERNGSFLDHD
Ga0210404_100649032	3300021088	Soil	LSEEGSAHLHLTEAGTIDNTFIFGPGTEYSSATFDLTWTPSGEVQHFRPGSSNPTDPSDFAAEMRFATATGSFTVIRNGVTFTINNATSAGVFAEMGRERNGSFLDHD
Ga0210400_113220981	3300021170	Soil	LSLSEEGSAHLHLTEAGTIDNTFIFGPGTEYSSATFDLTWTPSGEVQHFRPGSSNPTDPSNFAAEMRFATATGSFTVIRNGVTFTINNATSAGVFAEMGRERNGSFLDHD
Ga0210405_101217933	3300021171	Soil	LSEEGSAHLHLTEAGTIDNTFIFGPGTEYSSATFDLTWTPSGEVQHFRPGSSNPTDPSNFAAEMRFATATGSFTVIRNGVTFTINNATSAGVFAEMGRERNGSFLDHD
Ga0210408_102967543	3300021178	Soil	NYALSLSAEGTAHLHLTEAATIDNTFIFGPGTEYSSATFDLTWTPSGEVQHFRPGSSNPTDPSDFAAEMRFATATGSFTVIRNGVTFTINNATSAGVFAEMGRERNGSFLDHD
Ga0210396_102983013	3300021180	Soil	PSSGAQVHDFNGHVSQSGLFWIVAVPNYALSLSAEGTAHLHLTEAATIDNTFIFGPGTEYSSATFDLTWTPSGEVQHFRPGSSNPTDPSDFAAEMRFATATGSFTVIRNGVTFTINNATSAGVFAEMGRERNGSFLDHD
Ga0210410_100475173	3300021479	Soil	VSNRTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHFRPGSSDPTDPSNFAAEVRFATATGSFTVLQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0210410_108445172	3300021479	Soil	VPDYALSVSNRTARLHLTEEGTIDNTFFFGPGTEFSSATFDITWTPTGKVHHFRPGSSDPTDPSDFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGLFLQ
Ga0126371_107243461	3300021560	Tropical Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDITWTPMGQVQHFRPGSSDPTDPSNFAAEIRFATATGSFTVLKNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0126371_115498271	3300021560	Tropical Forest Soil	VPDYALFVSDQTARLHLTEAGTIDNIFIGGPGMDYASATFDITWTPMGKVQHFRPGSSDPTDPSNFAAEIRFATATGSFTVPQNGVTYTITNASSAGVFAEMGTERNGSFLP
Ga0242648_10773341	3300022506	Soil	PSSGAQVHDFNGHVSQSGLFWIVAVPNYALSLSEEGSAHLHLTEAGTIDNTFIFGPGTEYSSATFDLTWTPSGEVQHFRPGSSNPTDPSNFAAEMRFATATGSFTVIRNGVTFTINNATSAGVFAEMGRERNGSFLDHD
Ga0242660_10277741	3300022531	Soil	VGNKTARLHLTEEGTIDSTFFFGPGTEFSSATFDITWTPTGKVHHFRPGSSDPTDPSDFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGLFLQ
Ga0242661_10098673	3300022717	Soil	FWIVAVPNYALSLSEEGSAHLHLTEAATIDNTFIFGPGTEYSSATFDLTWTPSGEVQHFRPGSSNPTDPSDFAAEMRFATATGSFTVIRNGVTFTINNATSAGVFAEMGRERNGSFLDHD
Ga0242654_100400051	3300022726	Soil	VGNKTARLHLTEEGTIDSTFFFGPGTEFSSATFDITWTPTGKVHHFRPGSSDPTDPSDFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLQ
Ga0207654_108499632	3300025911	Corn Rhizosphere	VSNGTARLHLTEEGTIDNLFFGGPGIDYASATFDITWTPMGAVQHFRPVSSDPTDPSNFAAEIRFAIATGSFTVLQNGVIYTITNA
Ga0207652_105401222	3300025921	Corn Rhizosphere	VSNGTARLHLTEEGTIDNLFFGGPGIDYASATFDITWTPMGAVQHFRPGSSDPTDPSNFAAEIRFAIATGSFTVLQNGVIYTITNASSAGVFAEMGTERNGSFLP
Ga0207664_104699833	3300025929	Agricultural Soil	VPDYALFVSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDITWTPTGKVQHFRPGSSDPTDPSNFAAEIQFAIATGSFTVVRDGVTFTINNASSADVFAEMGTERNGFFLP
Ga0257156_10731011	3300026498	Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVHHFRPGSPDPTDPSNFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0257181_10013351	3300026499	Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFSSATFDITWTPTGKVHHFRPGSPDPTDPSNFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0179587_100147113	3300026557	Vadose Zone Soil	VSSGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVHHFRPGSSDPTDPSNFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0209215_10165922	3300027266	Forest Soil	VSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDLTWTPMGKVQHFRPGSSDPTDPSNFAAEIRFATATGSFTVLQNGVAYTITNA
Ga0209731_10547581	3300027326	Forest Soil	NTFFFGPGTEYSSATFDITWTPSGKVHHFRPGSSDPTDPSNFAADIRFATATGSFTVIQNGVTFTINNASSAGVFAEMGRERNGSFLAP
Ga0209622_10292222	3300027502	Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDLTWTPMGKVQHFRPGSSDPTDPSNFAAEIRFATATGSFTVLQNGVAYTITNASSAGVFAEMGTERNGSFLP
Ga0209178_10403642	3300027725	Agricultural Soil	VSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDITWTPTGKVQHFRPGSSDPTDPSNFAAEIQFAIATGSFTVVRDGVTFTINNASSADVFAEMGTERNGFFLP
Ga0209180_103177501	3300027846	Vadose Zone Soil	VSNGTARLHLTEEGSIDNTFFFGPGTEFASATFDITWTPTGKVQHFRPGSDDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0209465_100608573	3300027874	Tropical Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAATIDNTFFFGPGTDYASATFDITWTPMGQVQHFRPASSDPTDPSNFAAEIRFATATGSFTVLQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0209590_104878641	3300027882	Vadose Zone Soil	QVHDFNGHISQSGLFWIIPVPDYALFVSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0209488_100651583	3300027903	Vadose Zone Soil	DYALFVSNGTARLHLTEEGTIDNTFFFGPGTEFSSATFDITWTPTGKVHHFRPGSPDPTDPSNFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0209488_107780281	3300027903	Vadose Zone Soil	DYALFVSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0137415_110569571	3300028536	Vadose Zone Soil	AQVHDFNGHISQSGLFWIVSVPDYALFVSNGTARLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0075394_101060261	3300030969	Soil	VSDRTAHLHLTEEGTIDNTFFFGPGTEFTSATFDITWTPTGKVQHFRPGSSDPTDPSNFAADIRFATATGSFTVLQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0170834_1078338542	3300031057	Forest Soil	VSDRTAHLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHFRPGSSDPTDPSNFAADIRFATATGSFTVLQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0170834_1107767052	3300031057	Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFLGPGTDYASATFDITWTPMGEVQHFRPGSSDPTNPSNFAAEIRFATATGSFTVLQNGVTYTITNASSAGVFAEMGTERNGSFLP
Ga0170823_104692251	3300031128	Forest Soil	AGLFWIVAVPDYSLSVSDRTAHLHLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHFRPGSSDPTDPSNFAADIRFATATGSFTVLQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0170824_1061118731	3300031231	Forest Soil	TIDNTFFFGPGTEFASATFDITWTPTGEVRHFHPGSSDPTDPSNFAAEIRFATASGSFTVLQNGVTYTINNASSAGVFAEMGTERNGSFLP
Ga0170824_1151812161	3300031231	Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDLTWTPMGEVQHFRPGSSDLTDPSNFAAEIRFATATGSFTVLKNGVTYTITNASSAGVFAEMGTERNGSFLP
Ga0170820_110965032	3300031446	Forest Soil	VSNNKTARLHLTEAGTIDNTFFFGPGTEFASATFDITWTSTGKVQHFRPGSSDPTDPTNFSAEIRLATATGSFTVVQNGVTFTINDASS
Ga0170820_143272561	3300031446	Forest Soil	TFFFGPGTEFASATFDITWTPTGKVQHFRPGSSDPTDPSNFAADIRFATATGSFTVLQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0170819_156417931	3300031469	Forest Soil	VSNNKTARLHLTEAGTIDNTFFFGPGTEFASATFDITWTSTGKVQHFRPGSSDPTDPTNFSAEIRLATATGSFTVVQNGVTFTINDASSAGVFAEMGTERNGSFLP
Ga0170819_176665922	3300031469	Forest Soil	VSNRTARLRLTEEGTIDNTFFFGPGTEFASATFDITWTPTGKVQHFRPGSSDPTDPSNFAADIRFATATGSFTVLQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0307476_110871871	3300031715	Hardwood Forest Soil	VSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDLTWTPMGKVQHFRPGSSDLTDPSNFAAEIRFATATGSFTVLQNGVAYTITNASSAGVFA
Ga0307474_104024371	3300031718	Hardwood Forest Soil	LFWIIPVPDYALFVSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDLTWTPMGKVQHFRPGSSDLTDPSNFAAEIRFATATGSFTVLQNGVAYTITNASSAGVFAEMGTERNGSFLP
Ga0307474_108262831	3300031718	Hardwood Forest Soil	LSVSEDGPARLHLTEAATIDNTFIFGPGTEYANATFDITWTPMGDVQHFRPGSSNSTDPSNFAADIRFATATGSFTVLRNGVTFTINNASSAGVFAEMGRERNGSFLNQE
Ga0307468_1002434611	3300031740	Hardwood Forest Soil	LHLTEEGTIDNTFIGGPGTDYASATFDITWTPMGEVQHFRPGSSDPTDPSNFAAEMRFATATGSFTVIRNGVTFTINNATSAGVFAEMGRERNGSFLHDD
Ga0307475_100789065	3300031754	Hardwood Forest Soil	GPARLHLTEEGTIDNTFFFGPGTDYSSATFDITWTPSGGVQHFRPGSSNPTDPSNFAAEIRFATAAGSFTVIRNGVTFTINNASSAGVFAEMGRERNGSFLNQE
Ga0307475_101933432	3300031754	Hardwood Forest Soil	VSEDGPARLHLTEAATIDNTFIFGPGTEYANATFDITWTPMGDVQHFRPGSSNSTDPSNFAADIRFATATGSFTVLRNGVTFTINNASSAGVFAEMGRERNGSFLNQE
Ga0307475_102073531	3300031754	Hardwood Forest Soil	VPDYALSVSNGTARLHLTEEGTIDNTFFFGPGTEFSSATFDITWTPTGKVHHFRPGSSDPTDPSDFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLQ
Ga0307475_103023801	3300031754	Hardwood Forest Soil	VSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDLTWTPMGKVQHFRPGSSDLTDPSNFAAEIRFATATGSFTVLQNGVAYTITNASSAGVFAEMGTERNGSFLP
Ga0307473_102287603	3300031820	Hardwood Forest Soil	VSNGTARLHLTEEGTIDNTFFFGPGTEFSSATFDITWTPTGKVQHIRPGSSDPTDPSNFAADIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGSFLP
Ga0307478_105508232	3300031823	Hardwood Forest Soil	VPDYALSVSNGTARLHLTEEGTIDNTFFFGPGTEFSSATFDITWTPTGKVHHFRPGSSDPTDPSDFAAEIRFATATGSFTVVQNGVTFTINNASSA
Ga0307479_101067246	3300031962	Hardwood Forest Soil	VPDYALSVSNGTARLHLTEEGTIDNTFFFGPGTEFSSATFDITWTPTGKVHHFRPGSSDPTDPSDFAAEIRFATATGSFTVVQNGVTFTINNASSAGVFAEMGTERNGLFLK
Ga0307470_103357111	3300032174	Hardwood Forest Soil	VSNQTASLHLTEEGTIDNTFIFGPGSEFASATFDITWTASGKVQHFRPGSSDPTDPTNFSAEIRSATATGSFTVLQNGVTFTINNASSEGVFAEMGTERNGSFLP
Ga0307471_1000809293	3300032180	Hardwood Forest Soil	VSNGTARLHLTEEGTIDNTFIGGPGTDYASATFDITWTPMGEVQHFRPGSSDPTDPSNFAAEMRFATATGSFTVIRNGVTFTINNATSAGVFAEMGRERNGSFLDHD
Ga0307471_1037095482	3300032180	Hardwood Forest Soil	FWIIAVPDYTLSVSEDGPARLHLTEAATIDNTFIFGPGTEYANATFDITWTPMGDVQHFRPGSSNPADPSNFAADLRVATATGSFTVIRNGVIFTINNASSLGSFAEMGRERNGSFLE
Ga0306920_1033152982	3300032261	Soil	VSNGTARLHLTEAGTIDNTFFFGPGTDYASATFDITWTPMGEVQHFRPGSSDPTDPSNFAGEIRFATATGSFTVLQNGVTFTINSASSAGVFAEMGTERNGSFLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F065659

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences