Metagenome / Metatranscriptome Family F065909

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F065909
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	97 residues
Representative Sequence	MIVARHTAEFCPGGIVRPDKEFIKKTEESIKKSGVKLIDGYMDAPGHVFHFVLETDDNAALNIAVEPLRLVGEVTITPVLKFFKEGSDWAKKIGIQE
Number of Associated Samples	65
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	33.87 %
% of genes near scaffold ends (potentially truncated)	26.77 %
% of genes from short scaffolds (< 2000 bps)	78.74 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (74.016 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (22.047 % of family members)
Environment Ontology (ENVO)	Unclassified (23.622 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (40.157 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.20% β-sheet: 23.20% Coil/Unstructured: 45.60%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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SCOP family	SCOP domain	Representative PDB	TM-score
d.58.14.1: Ribosomal protein S6	d1loua_	1lou	0.66
d.58.14.1: Ribosomal protein S6	d1vmba_	1vmb	0.65
d.128.1.0: Glutamine synthetase/guanido kinase	d2bvca2	2bvc	0.64
d.58.18.0: ACT-like	d2wvfa2	2wvf	0.64
d.128.1.0: Glutamine synthetase/guanido kinase	d4lnoa2	4lno	0.64

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF08734	GYD	10.24
PF04191	PEMT	3.94
PF06348	DUF1059	3.15
PF01814	Hemerythrin	3.15
PF02627	CMD	2.36
PF00571	CBS	1.57
PF12654	DUF3786	1.57
PF01022	HTH_5	1.57
PF07431	DUF1512	0.79
PF02635	DrsE	0.79
PF04055	Radical_SAM	0.79
PF14417	MEDS	0.79
PF01596	Methyltransf_3	0.79
PF07784	DUF1622	0.79
PF01184	Gpr1_Fun34_YaaH	0.79
PF01048	PNP_UDP_1	0.79
PF01936	NYN	0.79
PF16916	ZT_dimer	0.79
PF02803	Thiolase_C	0.79
PF07973	tRNA_SAD	0.79
PF03631	Virul_fac_BrkB	0.79
PF03951	Gln-synt_N	0.79
PF02517	Rce1-like	0.79
PF01965	DJ-1_PfpI	0.79
PF00210	Ferritin	0.79
PF13508	Acetyltransf_7	0.79
PF13649	Methyltransf_25	0.79
PF12840	HTH_20	0.79
PF01625	PMSR	0.79
PF10604	Polyketide_cyc2	0.79
PF03358	FMN_red	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	10.24
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	2.36
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	2.36
COG0174	Glutamine synthetase	Amino acid transport and metabolism [E]	0.79
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.79
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG0775	Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnB	Nucleotide transport and metabolism [F]	0.79
COG0813	Purine-nucleoside phosphorylase	Nucleotide transport and metabolism [F]	0.79
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.79
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	0.79
COG1584	Succinate-acetate transporter SatP	Energy production and conversion [C]	0.79
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.79
COG2820	Uridine phosphorylase	Nucleotide transport and metabolism [F]	0.79
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.79
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.79
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.79
COG4828	Uncharacterized membrane protein	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.59 %
Unclassified	root	N/A	24.41 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.59 %
Unclassified	root	N/A	24.41 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	74.02 %
Unclassified	root	N/A	24.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.57 %

Name	Rank	Taxonomy	Distribution
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	60.63 %
Unclassified	root	N/A	24.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.57 %

Name	Rank	Taxonomy	Distribution
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	46.46 %
Unclassified	root	N/A	24.41 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	9.45 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.57 %

Name	Rank	Taxonomy	Distribution
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	46.46 %
Unclassified	root	N/A	24.41 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	7.87 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.57 %

Name	Rank	Taxonomy	Distribution
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	45.67 %
Unclassified	root	N/A	24.41 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	7.87 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.57 %

Name	Rank	Taxonomy	Distribution
unclassified Nitrososphaerales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales	45.67 %
Unclassified	root	N/A	24.41 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	7.87 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.57 %

Name	Rank	Taxonomy	Distribution
Nitrososphaerales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	45.67 %
Unclassified	root	N/A	24.41 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	7.87 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.57 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_103691190	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	861	Open in IMG/M
3300001213\|JGIcombinedJ13530_104609913	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	668	Open in IMG/M
3300001213\|JGIcombinedJ13530_105230530	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	938	Open in IMG/M
3300001213\|JGIcombinedJ13530_105623198	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	861	Open in IMG/M
3300001213\|JGIcombinedJ13530_110345017	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	541	Open in IMG/M
3300001547\|JGI20215J15232_1045192	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	579	Open in IMG/M
3300002961\|JGI11641J44799_10061748	Not Available	1070	Open in IMG/M
3300003432\|JGI20214J51088_10001949	All Organisms → cellular organisms → Archaea	13951	Open in IMG/M
3300003432\|JGI20214J51088_10004106	All Organisms → cellular organisms → Archaea	9615	Open in IMG/M
3300003432\|JGI20214J51088_10158654	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1598	Open in IMG/M
3300003541\|JGI20214J51650_10420972	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	933	Open in IMG/M
3300004078\|Ga0055513_10044814	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	897	Open in IMG/M
3300004481\|Ga0069718_15410233	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2873	Open in IMG/M
3300006224\|Ga0079037_100074400	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	2761	Open in IMG/M
3300006224\|Ga0079037_101463104	Not Available	681	Open in IMG/M
3300006224\|Ga0079037_101672358	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	636	Open in IMG/M
3300006950\|Ga0075524_10333288	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	666	Open in IMG/M
3300009053\|Ga0105095_10080000	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1765	Open in IMG/M
3300009091\|Ga0102851_11277592	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	811	Open in IMG/M
3300009091\|Ga0102851_11669462	Not Available	715	Open in IMG/M
3300009091\|Ga0102851_11954883	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	663	Open in IMG/M
3300009091\|Ga0102851_11994946	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	657	Open in IMG/M
3300009091\|Ga0102851_12352185	Not Available	608	Open in IMG/M
3300009111\|Ga0115026_10471451	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	927	Open in IMG/M
3300009111\|Ga0115026_11910057	Not Available	506	Open in IMG/M
3300009167\|Ga0113563_10636862	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1186	Open in IMG/M
3300009167\|Ga0113563_12452611	Not Available	629	Open in IMG/M
3300009167\|Ga0113563_12608622	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	611	Open in IMG/M
3300009179\|Ga0115028_10818625	Not Available	727	Open in IMG/M
3300009549\|Ga0116137_1131550	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	705	Open in IMG/M
3300010324\|Ga0129297_10009218	All Organisms → cellular organisms → Archaea	4897	Open in IMG/M
3300010324\|Ga0129297_10027119	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	2794	Open in IMG/M
3300010324\|Ga0129297_10040542	Not Available	2252	Open in IMG/M
3300010324\|Ga0129297_10163235	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1033	Open in IMG/M
3300010324\|Ga0129297_10221826	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	864	Open in IMG/M
3300010324\|Ga0129297_10312848	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	706	Open in IMG/M
3300010328\|Ga0129298_10081041	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1541	Open in IMG/M
3300010328\|Ga0129298_10161629	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1053	Open in IMG/M
3300010328\|Ga0129298_10440044	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	596	Open in IMG/M
3300010346\|Ga0116239_10547131	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	760	Open in IMG/M
3300010346\|Ga0116239_10643215	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	683	Open in IMG/M
3300011340\|Ga0151652_12525432	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	530	Open in IMG/M
3300012931\|Ga0153915_10076736	All Organisms → cellular organisms → Archaea	3493	Open in IMG/M
3300012931\|Ga0153915_10962914	All Organisms → cellular organisms → Archaea	993	Open in IMG/M
3300012931\|Ga0153915_11328818	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	840	Open in IMG/M
3300012931\|Ga0153915_11748162	Not Available	728	Open in IMG/M
3300012931\|Ga0153915_12064642	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	667	Open in IMG/M
3300012931\|Ga0153915_12185602	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	648	Open in IMG/M
3300012931\|Ga0153915_12737783	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	576	Open in IMG/M
3300012964\|Ga0153916_10052970	All Organisms → cellular organisms → Archaea	3665	Open in IMG/M
3300012964\|Ga0153916_11769803	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	690	Open in IMG/M
3300012964\|Ga0153916_11894263	Not Available	667	Open in IMG/M
3300012964\|Ga0153916_12069741	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	639	Open in IMG/M
3300012964\|Ga0153916_12132277	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	629	Open in IMG/M
3300014490\|Ga0182010_10210662	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1021	Open in IMG/M
3300017939\|Ga0187775_10319941	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	618	Open in IMG/M
3300017966\|Ga0187776_10729713	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	704	Open in IMG/M
3300018019\|Ga0187874_10000471	All Organisms → cellular organisms → Archaea	49688	Open in IMG/M
3300018021\|Ga0187882_1000043	All Organisms → cellular organisms → Archaea	139660	Open in IMG/M
3300018024\|Ga0187881_10402773	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	561	Open in IMG/M
3300018088\|Ga0187771_10155273	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1882	Open in IMG/M
3300018088\|Ga0187771_11143849	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	660	Open in IMG/M
3300018088\|Ga0187771_11255583	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	628	Open in IMG/M
3300022185\|Ga0079039_1375973	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	701	Open in IMG/M
3300022551\|Ga0212089_10003997	All Organisms → cellular organisms → Archaea	10755	Open in IMG/M
3300022551\|Ga0212089_10064808	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2066	Open in IMG/M
3300022551\|Ga0212089_10094489	All Organisms → cellular organisms → Archaea → TACK group	1615	Open in IMG/M
3300025144\|Ga0209725_1103785	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	929	Open in IMG/M
3300025144\|Ga0209725_1224484	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	565	Open in IMG/M
3300025319\|Ga0209520_10220958	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1185	Open in IMG/M
3300025891\|Ga0209585_10071996	All Organisms → cellular organisms → Archaea → TACK group	1289	Open in IMG/M
3300026026\|Ga0210129_1014986	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1206	Open in IMG/M
3300026026\|Ga0210129_1084403	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	632	Open in IMG/M
3300027723\|Ga0209703_1200788	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	733	Open in IMG/M
3300027818\|Ga0209706_10110275	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	1366	Open in IMG/M
3300027871\|Ga0209397_10550601	Not Available	575	Open in IMG/M
3300027877\|Ga0209293_10430137	Not Available	686	Open in IMG/M
(restricted) 3300031587\|Ga0315308_1003711	All Organisms → cellular organisms → Archaea → TACK group	8585	Open in IMG/M
(restricted) 3300031587\|Ga0315308_1032455	All Organisms → cellular organisms → Archaea → TACK group	2467	Open in IMG/M
(restricted) 3300031593\|Ga0315307_1011671	All Organisms → cellular organisms → Archaea	3730	Open in IMG/M
3300031712\|Ga0265342_10544940	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	589	Open in IMG/M
(restricted) 3300031806\|Ga0315306_10004607	All Organisms → cellular organisms → Bacteria	6114	Open in IMG/M
3300031873\|Ga0315297_10979919	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	700	Open in IMG/M
(restricted) 3300031876\|Ga0315310_10435139	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	523	Open in IMG/M
3300031999\|Ga0315274_10730344	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1064	Open in IMG/M
3300032046\|Ga0315289_10021964	All Organisms → cellular organisms → Archaea	8590	Open in IMG/M
3300032046\|Ga0315289_10182589	All Organisms → cellular organisms → Archaea	2317	Open in IMG/M
3300032069\|Ga0315282_10065507	All Organisms → cellular organisms → Archaea	3661	Open in IMG/M
3300032163\|Ga0315281_10213090	All Organisms → cellular organisms → Archaea	2147	Open in IMG/M
3300032163\|Ga0315281_11177592	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	767	Open in IMG/M
3300032173\|Ga0315268_11463174	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	695	Open in IMG/M
3300032829\|Ga0335070_10067599	Not Available	3851	Open in IMG/M
3300033408\|Ga0316605_11915530	Not Available	577	Open in IMG/M
3300033413\|Ga0316603_10157892	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1886	Open in IMG/M
3300033414\|Ga0316619_10078114	Not Available	2021	Open in IMG/M
3300033414\|Ga0316619_11814516	Not Available	553	Open in IMG/M
3300033419\|Ga0316601_101334136	Not Available	721	Open in IMG/M
3300033419\|Ga0316601_102472764	Not Available	522	Open in IMG/M
3300033433\|Ga0326726_10684715	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	989	Open in IMG/M
3300033433\|Ga0326726_11628091	Not Available	629	Open in IMG/M
3300033433\|Ga0326726_12042658	Not Available	558	Open in IMG/M
3300033480\|Ga0316620_10493074	All Organisms → cellular organisms → Archaea → TACK group	1130	Open in IMG/M
3300033482\|Ga0316627_100628526	Not Available	984	Open in IMG/M
3300033482\|Ga0316627_102604361	Not Available	535	Open in IMG/M
3300033485\|Ga0316626_10319514	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1271	Open in IMG/M
3300033485\|Ga0316626_10596217	Not Available	952	Open in IMG/M
3300033485\|Ga0316626_10602530	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	947	Open in IMG/M
3300033485\|Ga0316626_11376758	Not Available	633	Open in IMG/M
3300033486\|Ga0316624_10149249	Not Available	1741	Open in IMG/M
3300033486\|Ga0316624_10249761	All Organisms → cellular organisms → Archaea	1408	Open in IMG/M
3300033486\|Ga0316624_10308993	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1285	Open in IMG/M
3300033486\|Ga0316624_10374419	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1182	Open in IMG/M
3300033486\|Ga0316624_10604181	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	954	Open in IMG/M
3300033486\|Ga0316624_11468410	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	626	Open in IMG/M
3300033486\|Ga0316624_11599174	Not Available	601	Open in IMG/M
3300033487\|Ga0316630_10614420	All Organisms → cellular organisms → Archaea → TACK group	909	Open in IMG/M
3300033513\|Ga0316628_100001036	All Organisms → cellular organisms → Archaea	18979	Open in IMG/M
3300033513\|Ga0316628_100341068	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300033513\|Ga0316628_101935581	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	784	Open in IMG/M
3300033513\|Ga0316628_103729519	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	547	Open in IMG/M
3300033513\|Ga0316628_104281180	Not Available	507	Open in IMG/M
3300033521\|Ga0316616_101155146	Not Available	980	Open in IMG/M
3300034083\|Ga0373901_016735	All Organisms → cellular organisms → Archaea	1268	Open in IMG/M
3300034191\|Ga0373909_0259309	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	558	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.06%
Engineered	Engineered	3.15%
Host-Associated	Host-Associated	0.79%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	64.57%
Terrestrial	Environmental → Terrestrial	31.50%
Wastewater	Engineered → Wastewater	1.57%
Bioremediation	Engineered → Bioremediation	1.57%
Plants	Host-Associated → Plants	0.79%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	54.33%
Soil	Environmental → Terrestrial → Soil	29.13%
Marine	Environmental → Aquatic → Marine	10.24%
Peat	Environmental → Terrestrial → Peat	2.36%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	1.57%
Metal	Engineered → Bioremediation → Metal	1.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	26.77%
Lake	Environmental → Aquatic → Freshwater → Lake	23.62%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	22.83%
Wetlands	Environmental → Aquatic → Marine → Wetlands	10.24%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.36%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	1.57%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	1.57%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	25.98%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	23.62%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	19.68%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	7.87%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.09%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.36%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.36%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.57%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	1.57%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	1.57%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	22.05%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	12.60%
Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment	11.02%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	9.45%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	9.45%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	7.87%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	3.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.36%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.36%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.36%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.36%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.57%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	1.57%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	1.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	0.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.79%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	0.79%
Wetland	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Wetland	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001547	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site C1 Bulk	Environmental	Open in IMG/M
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004078	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleB_D2	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300010324	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaG	Environmental	Open in IMG/M
3300010328	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaG	Environmental	Open in IMG/M
3300010346	AD_USMOca	Engineered	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022551	Boni_combined assembly	Environmental	Open in IMG/M
3300025144	Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I18A1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300026026	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300027723	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300031587 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP3	Environmental	Open in IMG/M
3300031593 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP2	Environmental	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031806 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP1	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031876 (restricted)	Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP5	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032046	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40	Environmental	Open in IMG/M
3300032069	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300034083	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.2	Engineered	Open in IMG/M
3300034191	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B4A4.1	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1036911901	3300001213	Wetland	MIVAKHTLEFCPGGNIKPDKEFIKKTEESIKKSGVKFIDAYMDAPGHVFYFILETEDNAALNNAVETLRLVGEVKITPVMKFFKEGSDWAKEIGIQK*
JGIcombinedJ13530_1046099131	3300001213	Wetland	LLFMIVSRHTAEMCPGGIVRPDKEFSKKIESSMKKSGVKLVEGYMGAPSHVFYFVVEADGNKALNNAVEPLRLVWEVTIRPVLKFSENLEWARAIGIQK*
JGIcombinedJ13530_1052305302	3300001213	Wetland	LLFMIVAKHTIENCPGGAVRPDKEFINKTEESMKKSGIKLIDGYMDAPNHIFYFVLETDENPALNIAIEPLRLVGDVTITPVMKFFKEGHDWGKKIGIQE*
JGIcombinedJ13530_1056231982	3300001213	Wetland	LLFMIVAKHTAEMCPGGIVLPDREFLAKLGDSLKKSGVKEIMGYSDAPSHVYYFVFETDDNVSLNNAVEPLRLIGEVAIHPILKLTELSDWAKKIGIQK*
JGIcombinedJ13530_1103450171	3300001213	Wetland	LFFMVVARHTVDMCPGGNVRPDKEFIKKTEESMKKSGVKIVDGYMDAPGHVFYFVLETADNASLNIAVEPLRLVGEVTIAPVLKFFKEGSDWAKKIGIQE*
JGI20215J15232_10451921	3300001547	Wetland	GANIIFIIKGDFGLIFIIVARHSIEFCPGGLLRPDKEFIKKTEESMKKSGVKLIDGYMDAPGHVFYFVLETDDNTALNIAVEPLRLIGEVTIIPVLKFFKEGYDWGKKIGIQE*
JGI11641J44799_100617483	3300002961	Wetland	LLFMIVAKHSVENCPGGVVRPDKEFIKKTEESIKKSGVTLVDAYMDAPRHVFYFVIETADGSALNVAVEPLRLVGKVTITPVLKFFKEGSNWAKKIGIQD*
JGI20214J51088_1000194914	3300003432	Wetland	LLFLIIARHSAEMCPGGMVRPDKEFFKKTTENMKKAGVKLIEGYIDAPSHVFYFVMEADENKALNNAVEQLRLVGEVKIRPVMKFSETFDWAREIGIQQ*
JGI20214J51088_100041069	3300003432	Wetland	LLFMIIAKHTIENCPGGVVRPDKEFIKKTEESVKKSGVNLIDAYMDAPGHVFYFVVETNDNIALNMAIEPLRLVGDVTINPVMKFFKEGYDWGKKIGIQE*
JGI20214J51088_101586541	3300003432	Wetland	LLFMIVAKHTTEMCPGGVVLPDREFLTKLGESMKKSGVKEITGYTDAPSHVFYFVLETDNNIALNNAVEPLRLIGEVSIHPVLNLSEMSEWAKKIGIQK*
JGI20214J51650_104209722	3300003541	Wetland	MIVAKHTTEMCPGGVVLPDREFLTKLGESMKKSGVKEITGYTDAPSHVFYFVLETDNNIALNNAVEPLRLIGEVSIHPVLNLSEMSEWAKKIGIQK*
Ga0055513_100448142	3300004078	Natural And Restored Wetlands	LIFIIVARHSIEFCPGGLLRPDKEFIKKTEESMKKSGVKLIDGYMDAPGHVFYFVLETDDNTALNIAVEPLRLIGEVTIIPVLKFFKEGYDWGKKIGIQE*
Ga0069718_154102337	3300004481	Sediment	RPDKEFIKKTGESITKSGVKLIDALMDAPGHVFYFVLETDDSAALNIAVEPLRIVGEVTMTPVLKFFKEGSDWAKKIGIME*
Ga0079037_1000744004	3300006224	Freshwater Wetlands	LFFMVVAKHTVESCPGGVIRPDKEFIKKTEESIKKSGVKLIDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLVGKVWINPVLKFFKEGSDWAKKIGIQK*
Ga0079037_1014631041	3300006224	Freshwater Wetlands	LFFMVVAKHTVESCPGGVIRPDKEFIKKTEESIKKSGVKLVDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLVGKVWINPVLKFFKEGS
Ga0079037_1016723581	3300006224	Freshwater Wetlands	KLKRQAFGYYGLGDYDLLFMIVARHTPEFCPGGSVRPDKEFIKKTEESMKKSGVKLIDGYMDAPGHVFYFVLETTDNTALNIAVEQLRLVGEVTMTPVMKFFKEGSDWAKKIGIQE*
Ga0075524_103332881	3300006950	Arctic Peat Soil	MLFMIVTRHTAEMCPGGFVRPDKEFSNKIAESMKTSGVKLVEGYMDASSHIFYFVVEADDNKDLNNAVEPLRKVGEVTIRPVLKFSENLDWARTIGIQK*
Ga0105095_100800002	3300009053	Freshwater Sediment	MIVARHTAKFCPGGLVRPDKEFIKKTEESIKKSGVKLIDGYMDAPGHVFYFVLETDDNPSLNIAVEPLRLVGEVTIVPVMKFFKEGYDWGKKIGIQE*
Ga0102851_112775921	3300009091	Freshwater Wetlands	MIVARHTAKFCPGGIVRPDKEFIKKTQASIQKSGVKLIDGYMDAPGHVFYFVLETDDNAALNIAVEPLRLVGEVAINPVMKFFKEGYDWGKKVGIQE*
Ga0102851_116694621	3300009091	Freshwater Wetlands	MVVAKHTVESCPGGVIRPDKEFIKKTEESIKKSGVKLVDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLVGKVWINPVLKFFKEGSDWAKKIGIQK*
Ga0102851_119548831	3300009091	Freshwater Wetlands	MVVAKHSLEFCPGGVARPDKEFSVKLHESIRKSGVKEIAGFMDAPGHVFYFVFATDNNAALNNAVEPLRLIGDVTITPVLNFFAEGVAWAKKIGIQK*
Ga0102851_119949462	3300009091	Freshwater Wetlands	VTVRAQSQKLKRQAFGYYGLGDYDLLFMIVARHTPEFCPGGSVRPDKEFIKKTEESMKKSGVKLIDGYMDAPGHVFYFVLETTDNTALNIAVEQLRLVGEVRMTPVMKFFKEGSDWAKKIGIQE*
Ga0102851_123521851	3300009091	Freshwater Wetlands	VIGLIFLIVAKHTIESCPGGVIRPDKEFIKKTEESIKKSGVRLIDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLIGKVWINPVLKFFKEGSDWAKKIGIQK*
Ga0115026_104714512	3300009111	Wetland	MIVARHTAKFCPGGLVRPDKEFIKKTEESIKKSGVKLIDGYMDAPGHVFYFVLETDDNASLNIAVEPLRLVGEVTIVPVMKFFKEGYDWGKKIGIQE*
Ga0115026_119100571	3300009111	Wetland	MIVAKHTIENCPGGVKRPDREFIKKTEESIKKSGVRLIDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLVGKVWINPVLKFFKAGSDWAKKIGIME*
Ga0113563_106368621	3300009167	Freshwater Wetlands	MVVAKHTVESCPGGVIRPDKEFIKKTEESIKKSGVRLIDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLIGKVWINPVLKFFKEGSDWAKKIGIQK*
Ga0113563_124526112	3300009167	Freshwater Wetlands	MIVAKHTVESCPGGVIRPDKEFIKKTEESIKKSGVKLIDAYMDAPAHVFYFVVETDDNAALNIAVEPLRLVGKVWINPVLKFFKEGSDWAKKAGIQD*
Ga0113563_126086221	3300009167	Freshwater Wetlands	MIVARHTPEFCPGGSVRPDKEFIKKTEESMKKSGVKLIDGYMDAPGHVFYFVLETTDNTALNIAVEQLRLVGEVTMTPVMKFFKEGSDWAKKIGIQE*
Ga0115028_108186251	3300009179	Wetland	MIVARHTPEFCPGGLEKPDKEFIKKTEESMKKSGVKLLDGYMDAPGHVFYFVLDAVDNTALNIAVEPLRLVGTVTISPVMKFFKEGSDWAKKIGIQE*
Ga0116137_11315501	3300009549	Peatland	MVVARHSAESSPAGTVRPDKGFAAKVEESMKKSGVKEIAGYSDVPGHVHYFVLETDSNTALNNAVEPLRLVGDVTITPVLKWSDVVVWAKQIGIQK*
Ga0129297_100092189	3300010324	Lake Sediment	MIVARHTAELCPGGVVRPDKEFIKKTEESMMKSGVKLIEGYMDAPGHVFYFVLETADNAALNTAVEPLRLIGEVTITPVLKFFNEGSDWAKKIGIQK*
Ga0129297_100271193	3300010324	Lake Sediment	MVVAKHNAELCPGGSVRPDKGFTAKLEESMKKSGVKEIAGYTDAPGHVYYFVLETDNNKALNNAVEPLRIIGEVTITPVLKFSELVAWAKQIGIQK*
Ga0129297_100405423	3300010324	Lake Sediment	MVVARHSAELCPGGTVRPDKEFTAKLEESMKKSGVKEIAGYTDAPGHVYYFVVETDDNTALNNAVEPLRLVGEVTIAPVLKFSELVAWAKQIGIQK*
Ga0129297_101632353	3300010324	Lake Sediment	MVVARHNAELCPGGEVRPDKGFAAKVEESMKKSGVKEIAGYTDAPGHVHYFILETDDNTALNNAVEPLRLVGEVTITPVLKWSELVGWAKQIGIQK*
Ga0129297_102218262	3300010324	Lake Sediment	MVVARHSAELCPGGTVRPDKGFTAKLEESMKKSGVKEIAGYTDAPGHVYYFALETDDNTALNNAVEPLRLIGEVTITPVLKFS
Ga0129297_103128481	3300010324	Lake Sediment	FMIVARHSAELCPGGTVRPDKGFAAKVEESMKKSGVKEIAGYTDAPGHVHYFVLETDDNVALNNAVEPLRLVGEVSITPVLKFSELVAWAKQIGIQK*
Ga0129298_100810412	3300010328	Lake Sediment	MIVARHSAELCPGGTVRPDKGFAAKVEESMKKSGVKEIAGYADAPGHVHYFVLETDDNVALNNAVEPLRLVGEVSITPVLKFSELVAWAKQIGIQK*
Ga0129298_101616292	3300010328	Lake Sediment	MIVAKHTTEFCPGGVVRPDKEFIKKTEESIKKSGVKLIEGYMDAPGHVFYFVLETDDSAALNNAVEPLRLVGEVTITPVLKFFKEGSDWAKKIGIQK*
Ga0129298_104400441	3300010328	Lake Sediment	MIVARHTAELCPGGVVRPDKGFTAKIEESMKKSEVKEIAGYLDAPGHVYYFVLETDDNAALNNAVEPLRLVGEVTITPVLKFFKEGSDWAKKTGIQK*
Ga0116239_105471312	3300010346	Anaerobic Digestor Sludge	MLFIVVARHTLEFCPGGNVRPDKEFIKKTEESIKKSGVNLIEGYMDAPGHVFYFVVEATDNAALNSAVEPLRLVGEVAISPVMKFFKEGSDWAKKIGIQE*
Ga0116239_106432151	3300010346	Anaerobic Digestor Sludge	MLFMVVARHSVEMCPGGSIRPDKEFIRNVGESMEKSGANLIDGYMDAPRHVFYFIIEASDNAALNNAVEPFRLVGKVTIIPIMKFFKEGSEWAKKLGIQH*
Ga0151652_125254321	3300011340	Wetland	PDKEFIKKTEESVKKSGVNLIDAYMDAPGHVFYFVVETNDNIALNMAIEPLRLVGDVTINPVMKFFKEGYDWGKKIGIQE*
Ga0153915_100767366	3300012931	Freshwater Wetlands	MVVARHSIENCPGGVVRPDKEFIKKTEESIKKAGVKLLDGYMDAPGHVFYFVLETDDNPALNIAVEPLRLIGEVAITPIMNFFKEGREWGKKIGIQE*
Ga0153915_109629142	3300012931	Freshwater Wetlands	VIVLLFLIVAKHTIENCPGGVVRPDKEFIRKTEESIMKSGVKLIDGYMDAPRHVFYFVLETDDNPALNIAVEPLRLVGEVTITPVMKFFKEGYEWGKKLGIQE*
Ga0153915_113288182	3300012931	Freshwater Wetlands	MIVARHTAKLCPGGVVRPDKEFTAKIEESMKKSGVKEIAGYLDAPGHVYYFVLETDDNAALNNAVEPLRLIGEVAITPVLKFLEAVAWAKKIGIQK*
Ga0153915_117481621	3300012931	Freshwater Wetlands	MVVAKHTVESCPGGVIRPDKEFIKKTEESIKKSGVKLIDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLVGKVWINPVLKFFKEGSDWAKKIGIQE*
Ga0153915_120646421	3300012931	Freshwater Wetlands	MIVARHTPEMCPGGVVRPDKEFIKNTGESIKKSGAKLIDAYMDAPGHVFYFVLEIADNAALNIAVEPLRLVGEVTINPVLKFFKEGSDWA
Ga0153915_121856021	3300012931	Freshwater Wetlands	MVVARHSVELCPGGVVRPDKEFSVKLDASIKKSGVKEIAGYMDAPGHVFYFVLETDDNTALNNAVEPLRRVGEVTITPVLKFFSEGAAWAK
Ga0153915_127377831	3300012931	Freshwater Wetlands	MIVAKHKIEFCPGGIIKPDKEFIKKTEESMKKSGVKLIDGYMDAPGHVFYFVLDAVDNTALNIAVEPLRLVGTVTISPVLKFFKEGTDWA
Ga0153916_100529702	3300012964	Freshwater Wetlands	VIVLLFLIVAKHTIENCPGGVVRPDKEFIRKTEESIRKSGVKLIDGYMDAPRHVFYFVLETDDNPALNIAVEPLRLVGEVTITPVMKFFKEGYEWGKKLGIQE*
Ga0153916_117698032	3300012964	Freshwater Wetlands	MIVARHTAKLCPGGVVRPDKEFTAKIEESMKKSGVKEIAGYLDAPGHVYYFVLETDDSAALNNAVEPLRLIGEVAITPVLKFLEAVAWAKKIGIQK*
Ga0153916_118942632	3300012964	Freshwater Wetlands	CPGGNVRPDKDFIKKTEESMKKSGVKLIDGYMDAPGHVFYFVLEAVDNTALNIAVEPLRLVGTVTISPVLKFFKEGTDWAKKIGIQE*
Ga0153916_120697411	3300012964	Freshwater Wetlands	MIVARHTAELCPGGVVRPDKEFTAKIEESMKKSGVKEIAGYLDAPGHVYYFVLETDDNAALNNAVEPLRLVGEVTITPVLKFSEGVAWAKKIGIQK*
Ga0153916_121322771	3300012964	Freshwater Wetlands	MVVARHSVELCPGGVVRPDKEFSVKLDASIKKSGVKEIAGYMDAPGHVFYFVLETDDNTALNNAVEPLRLVGEVTITPVLKFFSEGAVWAKKIGIQK*
Ga0182010_102106622	3300014490	Fen	MIVAKHSVEMCPGGVVRPDKEFIQKTEESMKKSGAKLIDGYMDAPGHVFYFVLETADNTSLNIAVEPLRLLGEVMITPVMKFFKEGTDWAKKIGIQK*
Ga0187775_103199411	3300017939	Tropical Peatland	MVIARHTAELCPGGTVRPDREFAAKVEESMKKSGVQEIAGYTDAPGHVHYFVLETEDNKALNNAVEPLRLVGDVTITPVLKWSDLVGWAKQIGIQK
Ga0187776_107297132	3300017966	Tropical Peatland	MVIARHTAELCPGGTVRPDKEFAAKVEESMKKSGVQEIAGYTDAPGHVHYFVLETEDNKALNNAVEPLRLVGDVTITPVLKWSDLVGWAKQIGIQK
Ga0187874_1000047110	3300018019	Peatland	MVVAKHTVEFCPGGIARPDKEFIKKTGESMKMSGVKLIDGYMDAPGHVFYFVLETDDNTALNIAVEQFRLVGDVTITPVLKFFKEGSDWAKKIGIQK
Ga0187882_100004351	3300018021	Peatland	MVVARHSAESCPAGTVRPDKGFAAKVEESMKKSGVKEIAGYSDVPGHVHYFVLETDSNTALNNAVEPLRLVGDVTITPVLKWSDVVVWAKQIGIQK
Ga0187881_104027732	3300018024	Peatland	MIVAKHTPEMCPGGVVRPDKEFIKKTEESIKKSGAKLIDGYMDAPGHVFYFVLEIADNAALNVAVEPLRLVGEVTINPVMKFFKEGSAWAKEIGIQK
Ga0187771_101552733	3300018088	Tropical Peatland	MRRFDLLFLVIARHSAEMCPGGNVRPDKEFAAKVEESMKKSGVKEIAGYSDAPGHVHYFILETDDNRALNNAVEPLRLVGDVTIIPVLEWSRGVGWAKQIGIQK
Ga0187771_111438491	3300018088	Tropical Peatland	LLFMVVARHTAELCPGGVVRPDKEFTVKIDESMNKSGVKEIAGYLDAPGHVYYFVLETDDNAALNNAVEPLRRVGEVMITPILKFSEAVAWAKKIGIQK
Ga0187771_112555831	3300018088	Tropical Peatland	MVVARHSAELCPGGTIRPDKGFAAKVDESMKKSGVKEIAGYTDAPGHVHYFVLETDDNKALNNAVEPLRLVGDVTITPVLKWSDSVGWAKQIGIQK
Ga0079039_13759731	3300022185	Freshwater Wetlands	MVVAKHSLEFCPGGLVRPDKEFIAKLGESIKKSGVKEIAGCMDAPGHVFYFVFETDDNTALNNAVEPLRLVGDVMITPVLKFFAEGANWAKKIGIQK
Ga0212089_100039979	3300022551	Lake Sediment	LLFMIVARHTAELCPGGVVRPDKEFIKKTEESMMKSGVKLIEGYMDAPGHVFYFVLETADNAALNTAVEPLRLIGEVTITPVLKFFNEGSDWAKKIGIQK
Ga0212089_100648084	3300022551	Lake Sediment	LLFMVVARHSAELCPGGTVRPDKGFTAKLEESMKKSGVKEIAGYTDAPGHVYYFALETDDNTALNNAVEPLRLIGEVTITPVLKFSELVAWAKQIGIQK
Ga0212089_100944891	3300022551	Lake Sediment	LLFMVVARHNAELCPGGAVRPDKGFAAKVEESMKKSGVKEIAGYTDAPGHVHYFILETDDNTALNNAVEPLRLVGEVTITPVLKWSELVGWAKQIGIQK
Ga0209725_11037851	3300025144	Lake Sediment	MVVARHSAELCPGGTVRPDKGFTAKLEESMKKSGVKEIAGYTDAPGHVYYFALETDDNTALNNAVEPLRLIGEVTITPVLKFSELVAWAKQIGIQK
Ga0209725_12244841	3300025144	Lake Sediment	FMIVARHSAELCPGGTVRPDKGFAAKVEESMKKSGVKEIAGYADAPGHVHYFVLETDDNVALNNAVEPLRLVGEVSITPVLKFSELVAWAKQIGIQK
Ga0209520_102209582	3300025319	Soil	MIVARHTAEFCPGGIVRPDKEFIKKTEESIKKSGVKLIDGYMDAPGHVFHFVLETDDNAALNIAVEPLRLVGEVTITPVLKFFKEGSDWAKKIGIQE
Ga0209585_100719962	3300025891	Arctic Peat Soil	MLFMIVTRHTAEMCPGGFVRPDKEFSNKIAESMKTSGVKLVEGYMDASSHIFYFVVEADDNKDLNNAVEPLRKVGEVTIRPVLKFSENLDWARTIGIQK
Ga0210129_10149862	3300026026	Natural And Restored Wetlands	MIIAKHTIENCPGGVVRPDKEFIKKTEESVKKSGVNLIDAYMDAPGHVFYFVVETNDNIALNMAIEPLRLVGDVTINPVMKFFKEGYDWGKKIGIQE
Ga0210129_10844032	3300026026	Natural And Restored Wetlands	LLFMIVAKHSVENCPGGVVRPDKEFIKKTEESIKKSGVTLVDAYMDAPRHVFYFVIETADGSALNVAVEPLRLVGKVTITPVLKFFKEGSN
Ga0209703_12007882	3300027723	Freshwater Sediment	MIVARHTAKFCPGGLVRPDKEFIKKTEESIKKSGVKLIDGYMDAPGHVFYFVLETDDNPSLNIAVEPLRLVGEVTIVPVMKFFKEGYDWGKKIGIQE
Ga0209706_101102753	3300027818	Freshwater Sediment	LFFMVVAKHKVESCPGGVIRPDKDFIKKTENSIKKSGVKLIDAYMDAPAHLFYFVLETDDNAALNIAVEPLRLVGKVWINPVLKFFKEGSDWAKKIGIQE
Ga0209397_105506012	3300027871	Wetland	LFFMVVAKHTVESCPGGVIRPDKEFIKKTEESIKKSGVKLVDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLVGKVWINPVLKFFKEGSDWAKKIGIQK
Ga0209293_104301371	3300027877	Wetland	IVAKHTIESCPGGVIRPDKEFIKKTEESIKKSGVRLIDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLIGKVWINPVLKFFKEGSDWAKKIGIQK
(restricted) Ga0315308_10037115	3300031587	Sediment	MIVARHTAELCPGGVVRPDKEFIKKTEESMMKSGVKLIEGYMDAPGHVFYFVLETADNAALNTAVEPLRLIGEVTITPVLKFFNEGSDWAKKIGIQK
(restricted) Ga0315308_10324555	3300031587	Sediment	MIVARHSAELCPGGTVRPDKGFAAKVEESMKKSGVKEIAGYTDAPGHVHYFVLETDDNVALNNAVEPLRLVGEVSITPVLKFSELVAWAKQIGIQK
(restricted) Ga0315307_10116714	3300031593	Sediment	MIVARHSAELCPGGTVRPDKGFAAKVEESMKKSGVKEIAGYADAPGHVHYFVLETDDNVALNNAVEPLRLVGEVSITPVLKFSELVAWAKQIGIQK
Ga0265342_105449401	3300031712	Rhizosphere	AKHSVEMCPGGVVRPDKEFIQKTEESMKKSGAKLIDGYMDAPGHVFYFVLETADNTSLNIAVEPLRLLGEVMITPVMKFFKEGSDWAKKIGIQE
(restricted) Ga0315306_100046071	3300031806	Sediment	MVVARHNAELCPGGAVRPDKGFAAKVEESMKKSGVKEIAGYTDAPGHVHYFILETDDNTALNNAVEPLRLVGEVTITPVLKWSELVGWAKQIGIQK
Ga0315297_109799191	3300031873	Sediment	VLLFMIVAKHTAEMCPGGIVLPDREFLSKVGESMKKSGVKEIMGYTDAPSHVFYFVLETDNNAALNNAVEPLRLIGEVAIHPVLKLAEMSDWAKKIGIQK
(restricted) Ga0315310_104351392	3300031876	Sediment	RPDKEFTAKIEESMKKSGVKEIAGYLDAPGHVYYFVLETDDNAALNNAVEPLRLVGEVTITPVLKFSEAVAWAKKIGIQK
Ga0315274_104633802	3300031999	Sediment	MIIAKHTAELCPGGMVRPDKEFSAKLEKNMKESKVKVVGGYLDAPGHTWYFIVETDSNIALNNAVEQLRLTGEVVIVPVLEFLEGVVWAKKIGIQK
Ga0315274_107303443	3300031999	Sediment	MSVARHTAELCPGGVVRPDKEFTAKIEESMKKSGVKEIAGYLDAPGHVYYFVLETDDNAALNNATEPLRLVGEVTITPVLKFLEAVVWAKKIGIQK
Ga0315289_100219648	3300032046	Sediment	MIVARHTAELCPGGVVRPDKEFTAKIEESMKKSGVKEIAGYLDAPGHVYYFVLETDDNAALNNAVEPLRLVGEVTITPVLKFLEAVVWAKKIGIQK
Ga0315289_101825895	3300032046	Sediment	MIVARHTAELCPGGVVRPDKEFTAKIEESMKKSGVKEIAGYLDAPGHVYYFVLETDDNAALNNATEPLRLVGEVTITPVLKFLEAVVWAKKIGIQK
Ga0315289_106081042	3300032046	Sediment	IAKHTAELCPGGMVRPDKEFSAKLEKNMKESKVKVVGGYLDAPGHTWYFIVETDSNIALNNAVEQLRLTGEVVIVPVLEFLEGVVWAKKIGIQK
Ga0315282_100655071	3300032069	Sediment	LLFIVVAKHSIELCPGGVVRPDKEFIVKLAESIKKSGVKEIVGCMDAPGHVFYFVLETDDNAALNNAVEPLRLIGDVTITPVLKFFSEGAAWAKKIGIQK
Ga0315295_105976201	3300032156	Sediment	MIIAKHIAELCPGGMVRPDKEFSAKLEKNMKESKVKVVGGYLDAPGHTWYFIVETDSNIALNNAVEQLRLTGEVVIVPVLEFLEGVVWAKKIGIQK
Ga0315281_102130901	3300032163	Sediment	MIVARHTAELCPGGVVRPDKEFTAKIEESMKKSGVKEIAGYLDAPGHVYYFVLETDDNAALNNATEPLRLVGEVTITPVLKFLEAVVWAKKIGIQ
Ga0315281_111775921	3300032163	Sediment	MIVAKHTLEFCPGGIIRPDKEFIKKTEESIKKSGVKFVDAYMDAPGHVFYFVLETDANVALNNAVETLRLVGEVTIVPVLKFFKEGSDW
Ga0315268_114631741	3300032173	Sediment	VLLFMIVAKHTAEMCPGGIVLPDREFLSKVGESMKKSGVKEIMGYTDAPSHVFYFILETDNNEALNNAVEPLRLIGEVAIHPVLKLAEMSDWAKEIGIQK
Ga0335070_100675996	3300032829	Soil	MVVARHTIEMCPGGNVRPDKEFAAKVEEAMKKPGVKEIEGYTDAPGHVHYFILEAEDNTALNDAVEPLRLVGDVTITPVLRWSDMVGWAKQIGIQK
Ga0316605_119155301	3300033408	Soil	VTVLKQSQKLKRRAYRCNGEGDYGLLFMIVARHTPEFCPGGLEKPDKEFIKKTEESMKKSGVKLLDGYMDAPGHVFYFVLDAVDNTALNIAVEPLRLVGTVTISP
Ga0316603_101578923	3300033413	Soil	MIVAKHNAENCPGGVVRPDKEFINKTEESMKKSGVKLIDGYMDAPNHVFYFVLETADNASLNVAVEPLRLVGDVTITPVMKFFKEGHDWGKKIGIQE
Ga0316619_100781142	3300033414	Soil	LFFMVVAKHTVESCPGGVIRPDKEFIRKTEESIKKSGVKLIDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLVGKVWINPVLKFFKEGSDWAKKIGIQK
Ga0316619_118145161	3300033414	Soil	LLFMIVAKHTIENCPGGVKRPDREFIKKTEESIKKSGAKLIDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLVGKVWINPVLKFFKEGSDWAKKIGIQQ
Ga0316601_1013341362	3300033419	Soil	MIVAKHNVENCPGGVVRPDKEFINKTEESMKKSGVKLIDGYMDAPNHVFYFVLETADNASLNVAVEPLRLVGDVTITPVMKFFKEGHDWGKKIGIQE
Ga0316601_1024727641	3300033419	Soil	REIISTGSKKVIGLIFLIVAKHTIESCPGGVIRPDKEFIKKTEESIKKSGVRLIDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLIGKVWINPVLKFFKEGSDWAKKIGIQK
Ga0326726_106847151	3300033433	Peat Soil	MIVAKHTLEYCPGGNVRPDKEFIKKTEESIKKSGVKFIDAYMDAPAHVFYFFLETDDNAALNNAIETLRLVGKVKIAPVMKFFKEGSDWAKEIGIQK
Ga0326726_116280911	3300033433	Peat Soil	TAEMCPGGVVLPDRDFLAKLGESMKKSGVKEIMGYSDAPSHVYYFILETDDNVSLNNSVEPLRLIGEVAIHPVLKITELNDWAKKIGIQK
Ga0326726_120426581	3300033433	Peat Soil	MIVARHKIEFCPGGQIRPDKEFIKKTEESIKKSGVKLIDAYMDAPGHVFYFVLETTDNTALNSAVETLRLVGEVTINPVLKFFKEGSDWAKEIGIQK
Ga0316620_104930743	3300033480	Soil	MVVARHSIENCPGGVVRPDKEFIKKTEESIKKAGVKLLDGYMDAPGHVFYFVLETDDNPALNIAVEPLRLIGEVAITPI
Ga0316627_1006285261	3300033482	Soil	LFFMVVAKHTVESCPGGVIRPDKEFIKKTEESIKKSGVKLIDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLVGKVWINPVLKFFKEGSDWAKKIGIQK
Ga0316627_1026043611	3300033482	Soil	LFFMVVAKHTVESCPGGVIRPDKEFIKKTGESIKKSGVKLIEAYMDAPAHVFYFVLETNDNAALNIAVEPLRLVGKVWINPVLEFFKEGSDWAKKVGIQE
Ga0316626_103195142	3300033485	Soil	AIREIISTGSKKVIGLIFLIVAKHTIESCPGGVIRPDKEFIKKTEESIKKSGVRLIDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLIGKVWINPVLKFFKEGSDWAKKIGIQK
Ga0316626_105962171	3300033485	Soil	LFFMVVAKHTVESCPGGVIRPDKEFIKKTEESIKKSGVKLIDAYMDAPAHVFYFVLETDDTAALNIAVEPLRLVGKVWVNPVLKFFKEGSDWAKKIGIQE
Ga0316626_106025301	3300033485	Soil	VTVRAQSQKLKRQAFGYYGLGDYDLLFMIVARHTPEFCPGGSVRPDKEFIKKTEESMKKSGVKLIDGYMDAPGHVFYFVLETTDNTALNIAVEQLRLVGEVTMTPVMKFFKEGSDWAKKIGIQE
Ga0316626_113767581	3300033485	Soil	LFFMVVAKHTVESCPGGVIRPDKEFIKKTEESIKKSGVKLVDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLVGQVWINPVLKFFKEGSDWAKKIGI
Ga0316624_101492491	3300033486	Soil	MCPGGVVRPDKEFIKKTEESIKKSGAKLIDAYMDAPGHVFYFVLEIADNAALNIAVEPLRLVGEVTINPVLKFFKEGSDWAKEIGIQK
Ga0316624_102497613	3300033486	Soil	VIVLLFLIVAKHTIENCPGGVVRPDKEFIRKTEESIRKSGVTLVDGYMDAPRHVFYFVLETDDTPALNIAVEPLRLVGEVTITPVMKFFKEGYEWGKKLGIQE
Ga0316624_103089932	3300033486	Soil	LLFVIVARHTAEMCPGGLVKPDKEFIKKTEESMKKSGVKLIDGYMDAPGHVFYFVLDAADNAALNIAVEPLRLVGEVTISPVMKFFKEGSDWAKKIGIQQ
Ga0316624_103744192	3300033486	Soil	LFFMIIAKHTLEFCPGGNVKPDKEFIKKTEENMKKSGVKFIDAYMDAPAHVFYFILETEDNTALNNAVETLRLVGEVKITPVMKFFKEGSDWAKEIGIQK
Ga0316624_106041813	3300033486	Soil	MVVARHSIENCPGGVVRPDKEFIKKTEESIKKAGVKLLDGYMDAPGHVFYFVLETNDNPALNIAVEPLRLIGEVAITPIMNFFKEGREWGKKIGIQE
Ga0316624_114684102	3300033486	Soil	RPDKEFIKKTEESIKKSGVKFIDAYMNAPGHVFYFVLETDDNAALNNAVEPLRLVGEVKISPVMKFFKEGLDWAKEIGISK
Ga0316624_115991742	3300033486	Soil	YGLLFMIVARHTPEFCPGGLEKPDKEFIKKTEESMKKSGVKLLDGYMDAPGHVFDFVLDAVDNTALNIAVEPLRLVGTVTISPVMKFFKEGNDWAKKIGIQE
Ga0316630_106144202	3300033487	Soil	LIFLIVAKHTIESCPGGVIRPDKEFIKKTEESIKKSGVRLIDAYMDAPAHVFYFVLETDDNAALNIAVEPLRLIGKVWINPVLKFFKEGSDWAKKIGIQK
Ga0316628_10000103614	3300033513	Soil	MVVARHSIENCPGGVVRPDKEFIKKTEESIKKAGVKLLDGYMDAPGHVFYFVLETDDNPALNIAVEPLRLIGEVAITPIMNFFKEGREWGKKIGIQE
Ga0316628_1003410683	3300033513	Soil	VIVLLFLIVAKHTIENCPGGVVRPDKEFIRKTEESIRKSGVKLIDGYMDAPRHVFYFVLETDDNPALNIAVEPLRLVGEVTITPVMKFFKEGYEWGKKLGIQE
Ga0316628_1019355812	3300033513	Soil	LLFLVVARHTAEMCPGGIVHPDKGWTTKIEESMKKSGVKEIAGYSDAPGHVFYFVLETNDNTALNNAVEPLRLVGDVTITPVM
Ga0316628_1037295192	3300033513	Soil	KHSVESCPGGVIRPDRDFIKKTEESMKKSGVKLIDGYMDAPGHVFYFVIDAVDNTALNLAVEPLRLVGTVKISPVMKFFKEGSDWAKKIGIQE
Ga0316628_1042811801	3300033513	Soil	VTVLKQSQKLKRRAYRCNSEGDYGLLFMIVARHTPEFCPGGLEKPDKEFIKKTEESMKKSGVKLLDGYMDAPGHVFYFVLDAVDNTALNIAVEPLRLVGTVTISPVMKFFKEGSDWAKKIGIQE
Ga0316616_1011551461	3300033521	Soil	KHTVESCPGGVIRPDKEFIKKTEESIKKSGVKLIDAYMDAPAHVFYFVLETDDNAALNIAVEPLRIIGKVWINPVLKFFKEGSNWAKKIGIQE
Ga0373901_016735_932_1222	3300034083	Sediment Slurry	MIVARHTAKLCPGGVVRPDKEFTAKIEESMKKSGVKEIAGYLDAPGHVYYFVLETDDSAALNNAVEPLRLIGEVAITPVLKFSEAVAWAKKIGIQK
Ga0373909_0259309_285_557	3300034191	Sediment Slurry	MIVARHTAELCPGGVVRPDKEFTAKIEESMKKSGVKEIAGYLDAPGHVYYFVLETDDNAALNNAVEPLRLVGEVTITPVLKFLEAVVWAKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters