NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F065996

Metagenome / Metatranscriptome Family F065996

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F065996
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 71 residues
Representative Sequence MRKKIRALIYQKWFYAFLAVVLWFDCWTDVADVIEAFSTREVISLIGSTTGATLVTLIFFDLHLRWPPKGR
Number of Associated Samples 88
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 69.84 %
% of genes near scaffold ends (potentially truncated) 25.20 %
% of genes from short scaffolds (< 2000 bps) 92.13 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (75.591 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(16.535 % of family members)
Environment Ontology (ENVO) Unclassified
(39.370 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(54.331 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 60.61%    β-sheet: 0.00%    Coil/Unstructured: 39.39%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF00072Response_reg 66.93
PF11737DUF3300 2.36
PF10459Peptidase_S46 1.57
PF00406ADK 1.57
PF13709DUF4159 1.57
PF02738MoCoBD_1 1.57
PF14805THDPS_N_2 0.79
PF01548DEDD_Tnp_IS110 0.79
PF05690ThiG 0.79
PF12770CHAT 0.79
PF04389Peptidase_M28 0.79
PF02581TMP-TENI 0.79
PF13435Cytochrome_C554 0.79

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 127 Family Scaffolds
COG0563Adenylate kinase or related kinaseNucleotide transport and metabolism [F] 1.57
COG0214Pyridoxal 5'-phosphate synthase subunit PdxSCoenzyme transport and metabolism [H] 0.79
COG0352Thiamine monophosphate synthaseCoenzyme transport and metabolism [H] 0.79
COG2022Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis)Coenzyme transport and metabolism [H] 0.79
COG2070NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase familyGeneral function prediction only [R] 0.79
COG3547TransposaseMobilome: prophages, transposons [X] 0.79

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.59 %
UnclassifiedrootN/A24.41 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459010|GIO7OMY01AQ8FKNot Available533Open in IMG/M
3300004798|Ga0058859_11378667All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300005290|Ga0065712_10670012Not Available559Open in IMG/M
3300005329|Ga0070683_100849672All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300005331|Ga0070670_100479962All Organisms → cellular organisms → Bacteria1104Open in IMG/M
3300005331|Ga0070670_100574237All Organisms → cellular organisms → Bacteria1007Open in IMG/M
3300005332|Ga0066388_100527469All Organisms → cellular organisms → Bacteria1813Open in IMG/M
3300005332|Ga0066388_102606174Not Available921Open in IMG/M
3300005332|Ga0066388_108366730All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300005337|Ga0070682_100905559All Organisms → cellular organisms → Bacteria725Open in IMG/M
3300005340|Ga0070689_101106698All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300005355|Ga0070671_101509602All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300005355|Ga0070671_101779953All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300005459|Ga0068867_101567794All Organisms → cellular organisms → Bacteria615Open in IMG/M
3300005526|Ga0073909_10550657Not Available564Open in IMG/M
3300005529|Ga0070741_10014356All Organisms → cellular organisms → Bacteria13705Open in IMG/M
3300005535|Ga0070684_100232828All Organisms → cellular organisms → Bacteria → Acidobacteria1682Open in IMG/M
3300005535|Ga0070684_101180370All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076720Open in IMG/M
3300005535|Ga0070684_101266731All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300005543|Ga0070672_101187825Not Available679Open in IMG/M
3300005543|Ga0070672_102163255Not Available501Open in IMG/M
3300005548|Ga0070665_102457496All Organisms → cellular organisms → Bacteria523Open in IMG/M
3300005564|Ga0070664_100670764All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300005577|Ga0068857_100768819All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300005614|Ga0068856_100888584All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300005614|Ga0068856_101882267Not Available609Open in IMG/M
3300005617|Ga0068859_101527688All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300005764|Ga0066903_100709019All Organisms → cellular organisms → Bacteria1776Open in IMG/M
3300005764|Ga0066903_103512774All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria845Open in IMG/M
3300005764|Ga0066903_103816319All Organisms → cellular organisms → Bacteria → Proteobacteria810Open in IMG/M
3300005764|Ga0066903_104974332All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Gemmata705Open in IMG/M
3300005764|Ga0066903_107565892Not Available560Open in IMG/M
3300005764|Ga0066903_108238231All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300005841|Ga0068863_100450744All Organisms → cellular organisms → Bacteria1263Open in IMG/M
3300005842|Ga0068858_100751727All Organisms → cellular organisms → Bacteria950Open in IMG/M
3300006162|Ga0075030_100506782All Organisms → cellular organisms → Bacteria959Open in IMG/M
3300006175|Ga0070712_101699856Not Available552Open in IMG/M
3300006175|Ga0070712_101829002Not Available532Open in IMG/M
3300006358|Ga0068871_101861162Not Available572Open in IMG/M
3300006804|Ga0079221_10863671Not Available658Open in IMG/M
3300009098|Ga0105245_12110413All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300009174|Ga0105241_12063698All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300009177|Ga0105248_12007452All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300009545|Ga0105237_11304785All Organisms → cellular organisms → Bacteria732Open in IMG/M
3300010046|Ga0126384_10528567All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300010048|Ga0126373_10580970All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium1171Open in IMG/M
3300010358|Ga0126370_10444465All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300010358|Ga0126370_10967599Not Available774Open in IMG/M
3300010358|Ga0126370_11407153All Organisms → cellular organisms → Bacteria659Open in IMG/M
3300010358|Ga0126370_11803992Not Available592Open in IMG/M
3300010359|Ga0126376_11368975All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300010360|Ga0126372_10515061All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300010360|Ga0126372_11786963Not Available658Open in IMG/M
3300010361|Ga0126378_12111999All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300010362|Ga0126377_11580814All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300010366|Ga0126379_11636276All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300010376|Ga0126381_100190219All Organisms → cellular organisms → Bacteria → Acidobacteria2735Open in IMG/M
3300010376|Ga0126381_102258120Not Available782Open in IMG/M
3300010397|Ga0134124_11722749Not Available659Open in IMG/M
3300010398|Ga0126383_11419783Not Available784Open in IMG/M
3300010398|Ga0126383_12890151All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300010400|Ga0134122_12607473Not Available556Open in IMG/M
3300011120|Ga0150983_15028673All Organisms → cellular organisms → Bacteria794Open in IMG/M
3300012202|Ga0137363_10737147All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300012207|Ga0137381_11117014All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300012212|Ga0150985_121601277All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300012469|Ga0150984_117752233All Organisms → cellular organisms → Bacteria776Open in IMG/M
3300012960|Ga0164301_10375865All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → Verrucomicrobium → unclassified Verrucomicrobium → Verrucomicrobium sp. GAS474986Open in IMG/M
3300012960|Ga0164301_11602910All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300012960|Ga0164301_11898365Not Available503Open in IMG/M
3300012971|Ga0126369_10780208All Organisms → cellular organisms → Bacteria1037Open in IMG/M
3300012971|Ga0126369_10839749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1002Open in IMG/M
3300013297|Ga0157378_10490630All Organisms → cellular organisms → Bacteria → Proteobacteria1225Open in IMG/M
3300013297|Ga0157378_10716651All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300013297|Ga0157378_11501173Not Available718Open in IMG/M
3300013308|Ga0157375_13718639All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300014325|Ga0163163_11101696All Organisms → cellular organisms → Bacteria857Open in IMG/M
3300014325|Ga0163163_11174875All Organisms → cellular organisms → Bacteria830Open in IMG/M
3300014325|Ga0163163_11886607Not Available658Open in IMG/M
3300014745|Ga0157377_10987365Not Available636Open in IMG/M
3300014745|Ga0157377_11559416All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300014968|Ga0157379_11691526All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300014969|Ga0157376_10523961All Organisms → cellular organisms → Bacteria1169Open in IMG/M
3300014969|Ga0157376_10886541All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300014969|Ga0157376_11378973Not Available736Open in IMG/M
3300015371|Ga0132258_10693403All Organisms → cellular organisms → Bacteria2563Open in IMG/M
3300015371|Ga0132258_11002486Not Available2110Open in IMG/M
3300015371|Ga0132258_11028428All Organisms → cellular organisms → Bacteria2082Open in IMG/M
3300015371|Ga0132258_11802259All Organisms → cellular organisms → Bacteria1542Open in IMG/M
3300015373|Ga0132257_103209838All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300015374|Ga0132255_101223600All Organisms → cellular organisms → Bacteria → Acidobacteria1131Open in IMG/M
3300016270|Ga0182036_11067194All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300016294|Ga0182041_11973552All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300016422|Ga0182039_10682316All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300017792|Ga0163161_11160423All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300018083|Ga0184628_10037653All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin60762426Open in IMG/M
3300021478|Ga0210402_10087866All Organisms → cellular organisms → Bacteria2776Open in IMG/M
3300021478|Ga0210402_11657432All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300021560|Ga0126371_10821473All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300021560|Ga0126371_11475982All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300021560|Ga0126371_12201489All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300022720|Ga0242672_1057372All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300022726|Ga0242654_10139741All Organisms → cellular organisms → Bacteria799Open in IMG/M
3300022756|Ga0222622_10057718All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin60762224Open in IMG/M
3300025911|Ga0207654_10697657All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300025911|Ga0207654_11322173All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300025913|Ga0207695_10531883All Organisms → cellular organisms → Bacteria1057Open in IMG/M
3300025916|Ga0207663_11365053All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300025925|Ga0207650_10361581All Organisms → cellular organisms → Bacteria1196Open in IMG/M
3300025930|Ga0207701_11240414All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300025931|Ga0207644_11041901Not Available687Open in IMG/M
3300025934|Ga0207686_10381780All Organisms → cellular organisms → Bacteria1069Open in IMG/M
3300025940|Ga0207691_11606078Not Available529Open in IMG/M
3300025941|Ga0207711_11475910All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300026116|Ga0207674_11884025Not Available564Open in IMG/M
3300026555|Ga0179593_1176133All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin60762240Open in IMG/M
3300027821|Ga0209811_10432500Not Available510Open in IMG/M
3300028379|Ga0268266_10228625All Organisms → cellular organisms → Bacteria1713Open in IMG/M
3300028379|Ga0268266_10738511All Organisms → cellular organisms → Bacteria950Open in IMG/M
3300031231|Ga0170824_106724850All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → unclassified Opitutae → Opitutae bacterium Tous-C1TDCM864Open in IMG/M
3300031231|Ga0170824_117496972All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300031680|Ga0318574_10889541Not Available522Open in IMG/M
3300031720|Ga0307469_12150677All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300031954|Ga0306926_11487546All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300032782|Ga0335082_10810578All Organisms → cellular organisms → Bacteria → Acidobacteria798Open in IMG/M
3300033004|Ga0335084_10456435All Organisms → cellular organisms → Bacteria1314Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil16.54%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil7.09%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere7.09%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.09%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.15%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.94%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere3.94%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.36%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.36%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.36%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.36%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere2.36%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.36%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.57%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.57%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.57%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.57%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.79%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.79%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.79%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.79%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.79%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.79%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.79%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.79%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.79%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.79%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
3300004798Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018083Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022720Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_099301002170459010Grass SoilMRKLIRGLIYKKWFYGFLAAVLWFDWWTDMEDIIEAFSPRELLSLIMSTTGAVLVTVIFVDLQLHRPPEGR
Ga0058859_1137866723300004798Host-AssociatedMRQQIRALIYQKWFYAFLAVVLWFDCWTDVADAIEAFSPREVISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0065712_1067001223300005290Miscanthus RhizosphereMTKKIRALIYQKWFYAFLAVVLWFDCWTDVADAIEAFSLRELISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0070683_10084967213300005329Corn RhizosphereMRKLVRGLIYQKWFYAFLAVVLWFDCWTDVLDVIDAFSPREVASLIMSSTGAILVTLIFVDLHLRWPRGSR*
Ga0070670_10047996223300005331Switchgrass RhizosphereMRQRIRSLIYQKWFYAFLAVVLWFDCWTDMADVIEAFSPREVISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0070670_10057423713300005331Switchgrass RhizosphereMRKLIRSLIYQKWFYGFLAVVLWFDCWTDAADVIERFNSRELLSLIMSSTAAILVTLVFVDLHLRWPPGAR*
Ga0066388_10052746923300005332Tropical Forest SoilMRKLIRTLIYQKWFYAFLAVVLWFDCWTDLEDVIEAFSPREVLSLIMSTTGAILVTLVFVDLQFRWPPKG*
Ga0066388_10260617413300005332Tropical Forest SoilMGTIRKLIRGLIYQKWFYAFLAVGLWFDCYTDVVDVIEAYSLRELASLVMSGTSAILVTLIFLDLHLRWPPEGLELVWLRFW*
Ga0066388_10836673023300005332Tropical Forest SoilRSHEPGGTMWKLIRSLIYQKWFYAFLALALWFDVWTDVIDVIYAYSTRELLSLIMSTTGAILVTLIFIDLHTRWPPRGR*
Ga0070682_10090555913300005337Corn RhizosphereLIYQKWFYAFLAVVLWFDCWTDVADVIEAFSPREVISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0070689_10110669813300005340Switchgrass RhizosphereMRKKIRALIYQKWFYAFLAVVLWFDCWTDVADAIEAFSPREVISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0070671_10150960213300005355Switchgrass RhizosphereMRKLVRSLIYQKWFYGFLAVVLWFDVWTDLLDVIEAFSAREVTSLVMSTTGAILVTLIFVDL
Ga0070671_10177995313300005355Switchgrass RhizosphereIYQKWFYAFLAVVLWFDCWTDMADVIEAFSPREVISLIGSSTGATLVTLIFFDLHLRWPPKGR*
Ga0068867_10156779413300005459Miscanthus RhizosphereTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFLDLHLRWPLDKR*
Ga0073909_1055065723300005526Surface SoilMRQQIRSLIYQKWFYAFLAVVLWFDCWTDVADVIEAFSTREVISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0070741_1001435673300005529Surface SoilMRKLIRDLIYRKWFYAFLAVVLWFDCWTDIADVIEANSAREIVSLIMSATGAILVTLVFVDLHLRWPPGGR*
Ga0070684_10023282823300005535Corn RhizosphereMRKLVRGLIYQKWFYAFLAVVLWFDCWTDVLDVIEAFSPREVASLIMSSTGAILVTLIFVDLHLRWPRGSR*
Ga0070684_10118037023300005535Corn RhizosphereMRQRIRSLIYQKWFYAFLAVVLWFDCWTDVADAIEAFSPREVISLIGSTTGATLVTLIFFDLHL
Ga0070684_10126673113300005535Corn RhizosphereMRKLIRTLIYKKWFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFFDLHLRWPLDKR*
Ga0070672_10118782513300005543Miscanthus RhizosphereMRKKIRALIYQKWFYAFLAVVLWFDCWTDVADAIEAFSLRELISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0070672_10216325523300005543Miscanthus RhizosphereMAEIRKLIGGLIYRKWFYAFLAVVLWFDCWTDIADVIDSYSTRELVSLIMSGTGAILVTLIFLDLHRRWPPEGR*
Ga0070665_10245749613300005548Switchgrass RhizosphereWFYAFLAVVLWFDCWTDVADAIEAFSLRELISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0070664_10067076433300005564Corn RhizosphereLIYQKWFYAFLAVVLWFDCWTDMADVIEAFSPREVISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0068857_10076881923300005577Corn RhizosphereMRLVRDLIYQKWFYGFLAIVLWFDCYTDVEDVIEAYSTREVLSLVMSTTGAILVTLIFVDLHLRWPPRGR*
Ga0068856_10088858413300005614Corn RhizosphereSSLGCSRGTTMRKLIRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFLDLHLRWPLDKR*
Ga0068856_10188226723300005614Corn RhizosphereMRKLVRGLIYQKWFYAFLAVVLWFDCWTDVLDVIEAFSPREVASLIMSSTGAILVTLIFVDLQLRWPRGGR*
Ga0068859_10152768823300005617Switchgrass RhizosphereMRKLIRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFFDLHLRWPLDKR*
Ga0066903_10070901933300005764Tropical Forest SoilVRKLIRGLIYQKWFYLFLALALWLDCWTDIEDVIQAFSAREVLSLIMSSTGAILVTLIFIDLHFRWPPGSR*
Ga0066903_10351277423300005764Tropical Forest SoilMISKLVRGLIYQKWFYAFLAVVLWFDVWTDVADVIDIPSPREIFSLVTSGTGAILVTLIFLDLHLRWPPRDR*
Ga0066903_10381631933300005764Tropical Forest SoilIRGLIYKKWFYAFLAIVLWFDCVTDIQDVVGAFSPHELISLIMSTTGATLVTLIFIDLHLRWPPER*
Ga0066903_10497433223300005764Tropical Forest SoilMRNLIRGLIYKKWFYGVLAVVLWFDFWTDVQDVIERATPREITSLILSTTGAVLITLVFLDLHSRWPPKS*
Ga0066903_10756589213300005764Tropical Forest SoilMSSIRKLIRGLIYQKWFYGFLALVLWFDCYTDVADVIEVFSAREVTSLVMSSTGAILVTLIFLDLHLRW
Ga0066903_10823823113300005764Tropical Forest SoilLRKLVRGLIYQKWFYAFLAIVLWFDCWTDIEDVIEAFSPRELVSLVMSSTGAILVTLIFLDLHLRWPPAGR*
Ga0068863_10045074433300005841Switchgrass RhizosphereMMKLIRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFFDLHLRWPLDKR*
Ga0068858_10075172733300005842Switchgrass RhizosphereMRKLIRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFLDLHLRWPLDKR*
Ga0075030_10050678223300006162WatershedsMRKLIEKLIYRKWFYAFLALVLWVDSWTDLAGALEAPSLREVISLVLSVAAALLVTLVFVDLHWRWPRQGQ*
Ga0070712_10169985613300006175Corn, Switchgrass And Miscanthus RhizosphereMWKLVRSLIYQKWFYGFLAVVLWFDVWTDVVDVIEAFSAREVTSLVMSSTGAILVTLIFVDLHLRWPHGGR*
Ga0070712_10182900223300006175Corn, Switchgrass And Miscanthus RhizosphereMRQQIRSLIYQKWFYAFLAVVLWFDCWTDVADVIEAFSTREVISLIGSTTGATLVTLIFFDLHL
Ga0068871_10186116213300006358Miscanthus RhizosphereMRKLVRSLIYQKWFYGFLAVVLWFDVWTDLLDVIEASSAREVTSLVMSTTGAILVTLIFVDLYFRWPHESR*
Ga0079221_1086367123300006804Agricultural SoilMRKLIRSLIYRKWFYAFLCVVLWFDCWTDVADVIDAPSPREVISLIMSATGAILVTLIFLDLHLRWPPEKR*
Ga0105245_1211041313300009098Miscanthus RhizosphereMRQQIRALIYQKWFYAFLAVVLWFDCWTDVADAIEAFSLRELISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0105241_1206369813300009174Corn RhizosphereRLPVERTTMMKLIRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFFDLHLRWPLDKR*
Ga0105248_1200745223300009177Switchgrass RhizosphereMRQQIRSLIYQKWFYAFLAVVLWFDCWTDMADVIEAFSPREVISLIGSSTGATLVTLIFFDLHLRWPPKGR*
Ga0105237_1130478513300009545Corn RhizosphereMNQPQGPAWVRRQALGEPMRKKIRALIYQKWFYAFLAVVLWFDCWTDLADVIEVFSAREVISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0126384_1052856723300010046Tropical Forest SoilMRKLIRGLIYQKWFYAFLAVVLWFDCWTDLEDVIEAFSPREVLSLIMSTTGAILVTLVFVDLQFRWPPKG*
Ga0126373_1058097013300010048Tropical Forest SoilMTKRIRGLIYKKWFYAFLAVVLWFDCVTDIQDVVGSFSLHQVLSLIMSTTGATLVTLIFIDLHLRWPPER*
Ga0126370_1044446523300010358Tropical Forest SoilMRKLIRSLIYKKWFYAFLAIVLWFDCVTDIQDVVGAFSPHELISLIMSTTGATLVTLIFIDLHLRWPPER*
Ga0126370_1096759923300010358Tropical Forest SoilMISNLVRGLIYQKWFYAFLAVVLWFDWWTDMEDVIEAFSPRELLSLIMSTTGAVLVTVIFVDLHFRRPSGGE*
Ga0126370_1140715313300010358Tropical Forest SoilGERRMISKLVRGLIYQKWFYAFLAVVLWFDVWTDVADVIDIPSPREIFSLVTSGTGAILVTLIFLDLHLRWPRKDR*
Ga0126370_1180399213300010358Tropical Forest SoilMRKLIRGLIYQKWFYGFLAVILWFDCWTDVEDVIEIFNARELLSLIMSSTGAILVTLVFIDLHFRWPPQR*
Ga0126376_1136897523300010359Tropical Forest SoilMISKLVRGLIYQKWFYAFLAVVLWFDVWTDVADVIDIPSPREIFSLVTSGTGAILVTLIFLDLHLRWPPKDR*
Ga0126372_1051506123300010360Tropical Forest SoilMRKLIRGLIYQKWFYLFLALALWLDCWTDIEDVIQAFSAREVLSLIMSSTGAILVTLIFIDLHFRWPPGSR*
Ga0126372_1178696313300010360Tropical Forest SoilMRKLIRGLIYKKWFYAFLAIVLWFDCWTDIQDVVEAFSPHQVVSLVMSSTGAILVTLIFIDLQLRWPPGNK*
Ga0126378_1211199923300010361Tropical Forest SoilMISNLVRGLIYQKWFYAFLAVVLWFDVWTDVADVIDIPSPREIFSLVTSGTGAILVTLIFLDLHLRWPPKDR*
Ga0126377_1158081423300010362Tropical Forest SoilMMRKLIRSLIYQKWFYGFLAVVLWFDCWTDLEDVIELANARQVFSFVMSTTGAILVTVVFVDLHFRWPPDKR*
Ga0126379_1163627623300010366Tropical Forest SoilMRKLIRGLVYQKWFYAFLAAVLWLDCLTDIEDVIQIASLREVISLLMSATAAILVTLIFIDLHFRWPPESR*
Ga0126381_10019021933300010376Tropical Forest SoilMRKLIRGLIYKKWFYGFLAVVLWFDVSTDVADVIQANSAREMVSLMMSGTGAILVSLIFFDLHLRWPPGGR*
Ga0126381_10225812023300010376Tropical Forest SoilMRKLIRGLIYKKWFYAFLAIVLWFDCVTDIQDVVGAFSPHELISLIMSTTGATLVTLIFIDLHLRWPPER*
Ga0134124_1172274913300010397Terrestrial SoilMRKLIRGLIYKKWFYAFLAVVLWFDWWTDVEDVIEAFSLRELLSLTMSTIGALLVTVIFVDLHLHRPSEGR*
Ga0126383_1141978323300010398Tropical Forest SoilLRKLVRSWIYQKWFYAFLAVVLWFDCLTDIVDVIEAFSAREVLSLIMSTTGAVLVTLIFLDLHLRWPPKER*
Ga0126383_1289015123300010398Tropical Forest SoilQKWFYAFLAVVLWFDCWTDLEDVIEAFSPREVLSLIMSTTGAILVTLVFVDLQFRWPPKG
Ga0134122_1260747313300010400Terrestrial SoilMRKKIRALIYQKWFYAFLAVVLWFDCWTDVADVIEAFSTREVISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0150983_1502867323300011120Forest SoilMKKLIRALIYQKWFYAFLAVVLWFDCWTDIQDVIEAYNHRELLSLIMSTTGAILVTLIFLDLHLRWPPKGP*
Ga0137363_1073714723300012202Vadose Zone SoilMWKLVRGLIYQKWFYAFLAAVLWFDCWTDIADVVDAFSTREVLSLIMSSTGAILATLIFLDLHLRWPRGGR*
Ga0137381_1111701423300012207Vadose Zone SoilKLVRGLIYQKWFYAFLAVVLWFDCWTDVLDVIQAFSAREVISLVMSSTGAILVTLIFVDLHLRWPRGGR*
Ga0150985_12160127713300012212Avena Fatua RhizosphereMAEIRKLIGSLIYKKWFYAFLAVVLWFDCWTDIADVIDSFSAREVVSLVMSATGAILVTLIFLDLHRRWPPEGR*
Ga0150984_11775223323300012469Avena Fatua RhizosphereMAEIRKLIGSLIYKKWFYAFLAVVLWFDCWTDIADVIDSYSTRELVSLIMSGTGAILVTLIFLDLHRRWPPEGR*
Ga0164301_1037586523300012960SoilMRKLVRSLIYQKWFYGFLAVVLWFDVWTDLLDVIEAFSAREVTSLVMSTTGAILVTLIFVDLYFRWPHGSR*
Ga0164301_1160291013300012960SoilQKWFYAFLAVVLWFDCWTDMADVIEAFSAREVISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0164301_1189836513300012960SoilFYAFLAVVLWFDWWTDVEDVIEAFSLRELLSLTTSTIGALLVTVIFVDLQLHRPSEGR*
Ga0126369_1078020813300012971Tropical Forest SoilRKLIRGLIYQKWFYAFLAVVLWFDCWTDLEDVIEAFSPREVLSLIMSTTGAILVTLVFVDLQFRWPPKG*
Ga0126369_1083974923300012971Tropical Forest SoilMISNLVRGLIYQKWFYAFLAVVLWFDVWTDVADVIDISSPREIFSLVTSGTGAILVTLIFLDLHLRWPRKDR*
Ga0157378_1049063023300013297Miscanthus RhizosphereMRKLVRSLIYQKWFYGFLAVVLWFDVWTDLLDVIEASSAREVTSLVMSTTGAILVTLIFVDLYFRWPHGSR*
Ga0157378_1071665123300013297Miscanthus RhizosphereMMMKLIRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFFDLHLRWPLDKR*
Ga0157378_1150117323300013297Miscanthus RhizosphereMRKLIRGLIYQKWFYGFLAVVLWFDCVTDLEDVLDAATPHQVLSLVMSSVGAILVTVIFVDLHLRWPPKSS*
Ga0157375_1371863913300013308Miscanthus RhizosphereMRKLIESLIYRKSFFAFLAAVLWFDWWTDLEDVIGAFSPREVLSLALSTTGAVLVTVVFLDLQFGRPT*
Ga0163163_1110169613300014325Switchgrass RhizospherePVERTTMMKLIRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFFDLHLRWPLDKR*
Ga0163163_1117487523300014325Switchgrass RhizosphereMSEIRKLIGSLIYKKWFYAFLAVVLWFDCWTDIADVIDSFSAREVVSLVMSATGAILVTLIFLDLHRRWPPEGR*
Ga0163163_1188660723300014325Switchgrass RhizosphereMRKLIRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFLDLHLRWRLDKR*
Ga0157377_1098736523300014745Miscanthus RhizosphereMMKLIRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFLDLHLRWPLDKR*
Ga0157377_1155941613300014745Miscanthus RhizosphereARARHEFAGTHWGEPMRQRIRSLIYQKWFYAFLAVVLWFDCWTDMADVIEAFSPREVISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0157379_1169152613300014968Switchgrass RhizosphereQKWFYAFLAVVLWFDCWTDVADAIEAFSLRELISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0157376_1052396123300014969Miscanthus RhizosphereMMKLIRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFLDLHHRWPLDKR*
Ga0157376_1088654143300014969Miscanthus RhizosphereQKWFYGFLAVVLWFDVWTDLLDVIEAFSAREVTSLVMSTTGAILVTLIFVDLYFRWPHESR*
Ga0157376_1137897323300014969Miscanthus RhizosphereMRKLIRGLIYQKWFYGFLAVVLWFDWWTDVEDVIEAFSPRELLSLIMSTTGAVLVTVIFVDLHFRRPPGGG*
Ga0132258_1069340323300015371Arabidopsis RhizosphereMRKKIRALIYQKWFYAFLAIVLWFDCWTDVADAIEAFSLREVISLIGSTTGATLVTLIFFDLHLRWPPKGR*
Ga0132258_1100248623300015371Arabidopsis RhizosphereMRELIRGLIYKKWFYGFLAVVLWFDWWTDVEDVIEAFSSRELLSLIMSTTGAVLVTVIFVDLQLHPPPGDR*
Ga0132258_1102842823300015371Arabidopsis RhizosphereMRKLIRSLIYKKWFYAFLAVVLWFDCCTDALDVIEAFSLREVMALIMSTTGAILVTVIFVDLHFRWPPGRP*
Ga0132258_1180225923300015371Arabidopsis RhizosphereMWKLVRRLIYQKWFYAFLGVVLWFDCWTDIADFIQIYSLREVISLIGSATSAILVTLIFLDLHFRWPPRTR*
Ga0132256_10088793333300015372Arabidopsis RhizosphereYAFLAVVLWFDCCTDALDVIEAFSLREVMALIMSTTGAILVTVIFVDLHFRWPPGRP*
Ga0132257_10320983823300015373Arabidopsis RhizosphereMRKKIRALIYQKWFYAFLAVVLWFDCWTDVADAIEAFSLREVISLIGSTTGATLVTLIFFDLHLRWPPPKGR*
Ga0132255_10122360023300015374Arabidopsis RhizosphereMRKLIRSLIYKKWFHAFLAVVLWFDCCTDALDVIEAFSLREVMALIMSTTGAILVTVIFVDLHFRWPPGRP*
Ga0182036_1106719413300016270SoilMRRLIRGLIYKKWFYAFLAIVLWFDCWTDIQDVVESFSPHQVVSLVMSSTGAILVTLIFIDLQLRWPPGNR
Ga0182041_1197355223300016294SoilLEEMMRKLVRGLIYQKWFYAFLAVVLWFDCWTDIEDVIEAFSPREVFSLVMSSTGAILVTLVFLDLYLRWPNTDR
Ga0182039_1068231623300016422SoilMRRLIRGLIYKKWFYAFLAIVLWFDCWTDIQDVVESFSPHQVVSLVMSSTGAILVTLIFIDLQLRWPPGKQMMRYGHGPCG
Ga0163161_1116042313300017792Switchgrass RhizosphereMRQRIRSLIYQKWFYAFLAVVLWFDCWTDMADVIEAFSPREVISLIGSTTGATLVTLIFFDLHLRWPPKGR
Ga0184628_1003765323300018083Groundwater SedimentMRQQIRALIYQKWFYAFLAVVLWFDCWTDVADAIEAFSPREVISLIGSTTGATLVTLIFFDLHLRWPPKGR
Ga0210402_1008786633300021478SoilMRKLVRSLIYQKWFYAFLAVVLWFDCWTDVEDVIEAFSAREVISLIMSTTGATLVTLIFVDLHFRWPPRGR
Ga0210402_1165743213300021478SoilMMRKLIRGLIYQKWFYAFLAVVLWFDCWTDVADVIEAFSAREVISLIMSTTGATLVTLIFLDLHFRWPPGGR
Ga0126371_1082147323300021560Tropical Forest SoilMRKLIRGLIYKKWFYAFLAIVLWFDCWTDIQDVVEAFSPHQVVSLVMSSTGAILVTLIFIDLQLRWPPGNK
Ga0126371_1147598223300021560Tropical Forest SoilMTKRIRGLIYKKWFYAFLAVVLWFDCVTDIQDVVGSFSLHQVLSLVMSTTGATLVTLIFIDLHLRWPPER
Ga0126371_1220148913300021560Tropical Forest SoilMRKLIRGLIYKKWFYAFLAIVLWFDCVTDIQDVVGAFSPHELISLIMSTTGATLVTLIFIDLHLRWPPER
Ga0242672_105737213300022720SoilTQRPTMKKLIRGLIYQKWFYAFLAVVLWFDCWTDIQDVIEAYNHRELLSLIMSTTGAILVTLIFLDLHLRWPPKGP
Ga0242654_1013974123300022726SoilMKKLIRGLIYQKWFYAFLAVVLWFDCWTDIQDVIEAYSHRELLSLIMSTTGAILVTLIFLDLHLRWPPKGP
Ga0222622_1005771833300022756Groundwater SedimentMRKKIRALIYQKWFYAFLAVVLWFDCWTDLADAIEAFSPREVISLIGSTTGATLVTLIFFDLHLRWPPKGR
Ga0207654_1069765723300025911Corn RhizosphereMRKLVRGLIYQKWFYAFLAVVLWFDCWTDVLDVIEAFSPREVASLIMSSTGAILVTLIFVDLHLRWPRGSR
Ga0207654_1132217313300025911Corn RhizosphereRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFFDLHLRWPLDKR
Ga0207695_1053188323300025913Corn RhizosphereMRKLVRGLIYQKWFYAFLAVVLWFDCWTDVLDVIDAFSPREVASLIMSSTGAILVTLIFVDLHLRWPRGSR
Ga0207663_1136505323300025916Corn, Switchgrass And Miscanthus RhizosphereSLIYQKWFYAFLAVVLWFDCWTDVADVIEAFSTREVISLIGSTTGATLVTLIFFDLHLRWPPKGR
Ga0207650_1036158123300025925Switchgrass RhizosphereMRKKIRALIYQKWFYAFLAVVLWFDCWTDVADAIEAFSPREVISLIGSTTGATLVTLIFFDLHLRWPPKGR
Ga0207701_1124041423300025930Corn, Switchgrass And Miscanthus RhizosphereMRKLIRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFLDLHLRWPLDKR
Ga0207644_1104190113300025931Switchgrass RhizosphereMRKKIRALIYQKWFYAFLAVVLWFDCWTDMADVIEAFSPREVISLIGSTTGATLVTLIFFDLHLRWPPKGR
Ga0207686_1038178013300025934Miscanthus RhizosphereERTTMMKLIRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFFDLHLRWPLDKR
Ga0207691_1160607813300025940Miscanthus RhizosphereMRKKIRALIYQKWFYAFLAVVLWFDCWTDVADAIEAFSLRELISLIGSTTGATLVTLIFFDLHLRWPPKGR
Ga0207711_1147591013300025941Switchgrass RhizosphereEFAGTHWGEPMRQRIRSLIYQKWFYAFLAVVLWFDCWTDMADVIEAFSPREVISLIGSTTGATLVTLIFFDLHLRWPPKGR
Ga0207674_1188402523300026116Corn RhizosphereMMKLIRTLIYKKGFYAFLAVVLWFDCWTDVADVVEASSPREVISLIMSGTGAVLVTLIFLDLHLRWPLDKR
Ga0179593_117613313300026555Vadose Zone SoilMRKKIRALIYQKWFYAFLAVVLWFDCWTDVADAIEAFSTREVISLIGSTTGATLVTLIFF
Ga0209811_1043250013300027821Surface SoilMRQQIRSLIYQKWFYAFLAVVLWFDCWTDVADVIEAFSTREVISLIGSTTGATLVTLIFFDLHLRWPPKGR
Ga0268266_1022862523300028379Switchgrass RhizosphereMRKLIRSLIYQKWFYGFLAVVLWFDCWTDAADVIERFNSRELLSLIMSSTAAILVTLVFVDLHLRWPPGAR
Ga0268266_1073851123300028379Switchgrass RhizosphereMRQRIRSLIYQKWFYAFLAVVLWFDCWTDVADAIEAFSLRELISLIGSTTGATLVTLIFFDLHLRWPPKGR
Ga0170824_10672485023300031231Forest SoilMWKLVRSLIYQKWFYGFLAVVLWFDVWTDVVDVIEAFSAREVTSLVMSSTGAILVTLIFVDLHLRWPHGGR
Ga0170824_11749697223300031231Forest SoilMRKLVRSLIYKKWFYGFLAVVLWFDCWTDVLDVIQAFSTREAISLVMSSTGAILVTLIFVDLHLRWPPGGR
Ga0318574_1088954123300031680SoilMRKLVRGLIYQKWFYAFLAVVLWFDCWTDIEDVIEAFSPREVFSLVMSSTGAILVTLVFLDLYLRWPNTDR
Ga0307469_1215067713300031720Hardwood Forest SoilALIYQKWFYAFLAVVLWFDCWTDVADAIEAFSPREVISLIGSTTGATLVTLIFFDLHLRWPPKGR
Ga0306926_1148754633300031954SoilIYQKWFYAFLAVVLWFDCWTDIEDVIEAFSPREVFSLVMSSTGAILVTLVFLDLYLRWPNTDR
Ga0335082_1081057813300032782SoilMRALIRGLIYKKWFYAFLAVVLWFDCFTDIEDVIETANFRQLVSLVMSSTGAILVTVIFIDLHLRWPPKGR
Ga0335084_1045643513300033004SoilMRDLIRGLIYKKWFYAFLAVVLWFDCWTDIADVIEAFSAREVLSLVMSTTGAILVTLVFADLHFRWPPGGR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.