Metagenome / Metatranscriptome Family F066001

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066001
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	38 residues
Representative Sequence	MTAIARIARRVASVVDEMNYAQRRTMELFLGLDENRR
Number of Associated Samples	99
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.60 %
% of genes near scaffold ends (potentially truncated)	14.17 %
% of genes from short scaffolds (< 2000 bps)	77.17 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.331 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.709 % of family members)
Environment Ontology (ENVO)	Unclassified (41.732 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.094 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.31% β-sheet: 0.00% Coil/Unstructured: 47.69%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF06224	HTH_42	5.51
PF13669	Glyoxalase_4	3.94
PF13193	AMP-binding_C	3.15
PF02776	TPP_enzyme_N	2.36
PF01636	APH	1.57
PF04229	GrpB	1.57
PF13671	AAA_33	1.57
PF07883	Cupin_2	1.57
PF00106	adh_short	0.79
PF01436	NHL	0.79
PF04101	Glyco_tran_28_C	0.79
PF03795	YCII	0.79
PF01979	Amidohydro_1	0.79
PF00583	Acetyltransf_1	0.79
PF00903	Glyoxalase	0.79
PF03621	MbtH	0.79
PF08021	FAD_binding_9	0.79
PF00486	Trans_reg_C	0.79
PF03176	MMPL	0.79
PF12706	Lactamase_B_2	0.79
PF04978	DUF664	0.79
PF07969	Amidohydro_3	0.79
PF00248	Aldo_ket_red	0.79
PF00296	Bac_luciferase	0.79
PF13560	HTH_31	0.79
PF04672	Methyltransf_19	0.79
PF13424	TPR_12	0.79
PF13380	CoA_binding_2	0.79
PF13683	rve_3	0.79
PF01613	Flavin_Reduct	0.79
PF11716	MDMPI_N	0.79
PF09339	HTH_IclR	0.79
PF01972	SDH_sah	0.79
PF12697	Abhydrolase_6	0.79
PF03682	UPF0158	0.79
PF07927	HicA_toxin	0.79
PF02899	Phage_int_SAM_1	0.79
PF08326	ACC_central	0.79
PF01545	Cation_efflux	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	5.51
COG0543	NAD(P)H-flavin reductase	Energy production and conversion [C]	1.57
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.57
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	1.57
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	0.79
COG1018	Flavodoxin/ferredoxin--NADP reductase	Energy production and conversion [C]	0.79
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.79
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	0.79
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.79
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.79
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.79
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG2375	NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains	Inorganic ion transport and metabolism [P]	0.79
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.79
COG3251	MbtH family protein, regulates adenylation domains of NRPSs	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.79
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	0.79
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.79
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.33 %
Unclassified	root	N/A	45.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.33 %
Unclassified	root	N/A	45.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.33 %
Unclassified	root	N/A	45.67 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.61 %
Unclassified	root	N/A	45.67 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	48.82 %
Unclassified	root	N/A	45.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	40.16 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.15 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	3.15 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.36 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.36 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.57 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.15 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.36 %
unclassified Pseudonocardiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales	2.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.36 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.57 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.79 %
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	0.79 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2.36 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.36 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.79 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.79 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.79 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.36 %
unclassified Actinoplanes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes	0.79 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.79 %
Streptomyces hokutonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces hokutonensis	0.79 %
Streptomyces kebangsaanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces kebangsaanensis	0.79 %
Saccharopolyspora pogona	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	0.79 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.67 %
Pseudonocardiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	2.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.36 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.36 %
Actinoplanes sp. OR16	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. OR16	0.79 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.79 %
Streptomyces hokutonensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces hokutonensis	0.79 %
Streptomyces kebangsaanensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces kebangsaanensis	0.79 %
Saccharopolyspora pogona	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	0.79 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_148561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300001403\|JGI20205J14842_1000467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8935	Open in IMG/M
3300005168\|Ga0066809_10198826	Not Available	541	Open in IMG/M
3300005169\|Ga0066810_10076796	Not Available	702	Open in IMG/M
3300005169\|Ga0066810_10114438	Not Available	612	Open in IMG/M
3300005176\|Ga0066679_10613981	Not Available	709	Open in IMG/M
3300005524\|Ga0070737_10014292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5998	Open in IMG/M
3300005524\|Ga0070737_10017607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces hokutonensis	5134	Open in IMG/M
3300005529\|Ga0070741_10315580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1461	Open in IMG/M
3300005548\|Ga0070665_100502804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1223	Open in IMG/M
3300005553\|Ga0066695_10691434	Not Available	599	Open in IMG/M
3300005563\|Ga0068855_101976064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	589	Open in IMG/M
3300005577\|Ga0068857_100920730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	839	Open in IMG/M
3300005764\|Ga0066903_100489823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2077	Open in IMG/M
3300005764\|Ga0066903_103753096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	817	Open in IMG/M
3300005952\|Ga0080026_10039218	Not Available	1214	Open in IMG/M
3300005995\|Ga0066790_10000893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12129	Open in IMG/M
3300005995\|Ga0066790_10305263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300006028\|Ga0070717_10059986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3149	Open in IMG/M
3300006028\|Ga0070717_10079276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2753	Open in IMG/M
3300006028\|Ga0070717_10482494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1119	Open in IMG/M
3300006028\|Ga0070717_10910848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	800	Open in IMG/M
3300006175\|Ga0070712_101163773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	670	Open in IMG/M
3300006572\|Ga0074051_10011291	Not Available	768	Open in IMG/M
3300006574\|Ga0074056_11542176	Not Available	667	Open in IMG/M
3300006576\|Ga0074047_12051963	Not Available	727	Open in IMG/M
3300006581\|Ga0074048_12406826	Not Available	665	Open in IMG/M
3300006804\|Ga0079221_10206669	Not Available	1080	Open in IMG/M
3300006893\|Ga0073928_10710082	Not Available	701	Open in IMG/M
3300006903\|Ga0075426_10141872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1732	Open in IMG/M
3300007265\|Ga0099794_10422042	Not Available	698	Open in IMG/M
3300007982\|Ga0102924_1157655	Not Available	1039	Open in IMG/M
3300009038\|Ga0099829_10806156	Not Available	780	Open in IMG/M
3300009038\|Ga0099829_11222237	Not Available	622	Open in IMG/M
3300009089\|Ga0099828_11801561	Not Available	538	Open in IMG/M
3300009090\|Ga0099827_10264224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1449	Open in IMG/M
3300009090\|Ga0099827_11687125	Not Available	552	Open in IMG/M
3300009101\|Ga0105247_10319693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1082	Open in IMG/M
3300009137\|Ga0066709_101112651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1161	Open in IMG/M
3300009143\|Ga0099792_11259244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	504	Open in IMG/M
3300009698\|Ga0116216_10703549	Not Available	607	Open in IMG/M
3300010043\|Ga0126380_10175614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1405	Open in IMG/M
3300010321\|Ga0134067_10247820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces kebangsaanensis	670	Open in IMG/M
3300010326\|Ga0134065_10242430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	669	Open in IMG/M
3300010358\|Ga0126370_10290370	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1291	Open in IMG/M
3300010371\|Ga0134125_10144645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2648	Open in IMG/M
3300010379\|Ga0136449_102546483	Not Available	732	Open in IMG/M
3300010396\|Ga0134126_10176556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2571	Open in IMG/M
3300010398\|Ga0126383_11540183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	754	Open in IMG/M
3300011269\|Ga0137392_11189029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	621	Open in IMG/M
3300012004\|Ga0120134_1044395	Not Available	760	Open in IMG/M
3300012011\|Ga0120152_1041565	Not Available	1541	Open in IMG/M
3300012198\|Ga0137364_10930843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300012199\|Ga0137383_10066926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2586	Open in IMG/M
3300012199\|Ga0137383_10386899	Not Available	1025	Open in IMG/M
3300012201\|Ga0137365_10058130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2919	Open in IMG/M
3300012201\|Ga0137365_10140561	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1815	Open in IMG/M
3300012201\|Ga0137365_10320093	Not Available	1148	Open in IMG/M
3300012204\|Ga0137374_10040624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4930	Open in IMG/M
3300012206\|Ga0137380_10021600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5914	Open in IMG/M
3300012206\|Ga0137380_10022986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5734	Open in IMG/M
3300012206\|Ga0137380_10025352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5463	Open in IMG/M
3300012206\|Ga0137380_10042391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4189	Open in IMG/M
3300012206\|Ga0137380_10117724	All Organisms → cellular organisms → Bacteria	2427	Open in IMG/M
3300012206\|Ga0137380_11404611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300012207\|Ga0137381_11175889	Not Available	659	Open in IMG/M
3300012209\|Ga0137379_10086641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3013	Open in IMG/M
3300012285\|Ga0137370_10590444	Not Available	686	Open in IMG/M
3300012350\|Ga0137372_10544352	Not Available	858	Open in IMG/M
3300012350\|Ga0137372_10688813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	741	Open in IMG/M
3300012350\|Ga0137372_11149798	Not Available	529	Open in IMG/M
3300012351\|Ga0137386_10082912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2249	Open in IMG/M
3300012351\|Ga0137386_10787416	Not Available	683	Open in IMG/M
3300012356\|Ga0137371_10050456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3217	Open in IMG/M
3300012357\|Ga0137384_11337310	Not Available	564	Open in IMG/M
3300012359\|Ga0137385_10010004	All Organisms → cellular organisms → Bacteria	8386	Open in IMG/M
3300012359\|Ga0137385_10517915	Not Available	1008	Open in IMG/M
3300012683\|Ga0137398_10364347	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300012917\|Ga0137395_10797799	Not Available	684	Open in IMG/M
3300012930\|Ga0137407_10973514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	803	Open in IMG/M
3300012960\|Ga0164301_11013096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	654	Open in IMG/M
3300012989\|Ga0164305_11517380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300013765\|Ga0120172_1121358	Not Available	628	Open in IMG/M
3300014489\|Ga0182018_10156987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → unclassified Pseudonocardiales → Pseudonocardiales bacterium	1297	Open in IMG/M
3300014501\|Ga0182024_10912153	Not Available	1058	Open in IMG/M
3300014829\|Ga0120104_1047771	Not Available	803	Open in IMG/M
3300015264\|Ga0137403_11119977	Not Available	633	Open in IMG/M
3300020021\|Ga0193726_1207376	Not Available	821	Open in IMG/M
3300021405\|Ga0210387_10915820	Not Available	771	Open in IMG/M
3300021560\|Ga0126371_10214299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2027	Open in IMG/M
3300021560\|Ga0126371_10301058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1730	Open in IMG/M
3300022527\|Ga0242664_1022802	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300022557\|Ga0212123_10134818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	1935	Open in IMG/M
3300022557\|Ga0212123_10374618	Not Available	964	Open in IMG/M
3300025504\|Ga0208356_1004861	Not Available	3180	Open in IMG/M
3300025588\|Ga0208586_1068346	Not Available	788	Open in IMG/M
3300025634\|Ga0208589_1035588	Not Available	1330	Open in IMG/M
3300025885\|Ga0207653_10138427	Not Available	888	Open in IMG/M
3300025898\|Ga0207692_11020980	Not Available	546	Open in IMG/M
3300025910\|Ga0207684_10549159	Not Available	988	Open in IMG/M
3300025915\|Ga0207693_10526916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	922	Open in IMG/M
3300026217\|Ga0209871_1009326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1844	Open in IMG/M
3300026217\|Ga0209871_1022662	Not Available	1170	Open in IMG/M
3300026294\|Ga0209839_10000766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16431	Open in IMG/M
3300026294\|Ga0209839_10251714	Not Available	554	Open in IMG/M
3300026497\|Ga0257164_1023985	Not Available	884	Open in IMG/M
3300027523\|Ga0208890_1001486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2369	Open in IMG/M
3300027745\|Ga0209908_10213769	Not Available	532	Open in IMG/M
3300027882\|Ga0209590_10667602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	666	Open in IMG/M
3300028379\|Ga0268266_10539301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1117	Open in IMG/M
3300028666\|Ga0265336_10146501	Not Available	702	Open in IMG/M
3300028784\|Ga0307282_10593737	Not Available	537	Open in IMG/M
3300028800\|Ga0265338_10001991	All Organisms → cellular organisms → Bacteria	31759	Open in IMG/M
3300029951\|Ga0311371_11150768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	903	Open in IMG/M
3300030730\|Ga0307482_1169131	All Organisms → cellular organisms → Bacteria → Terrabacteria group	648	Open in IMG/M
3300030738\|Ga0265462_11759912	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300031573\|Ga0310915_10089003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2067	Open in IMG/M
3300031777\|Ga0318543_10392592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora → Saccharopolyspora pogona	622	Open in IMG/M
3300031939\|Ga0308174_11304510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	620	Open in IMG/M
3300032160\|Ga0311301_10430900	Not Available	1999	Open in IMG/M
3300032160\|Ga0311301_13059878	Not Available	501	Open in IMG/M
3300032174\|Ga0307470_11435317	Not Available	571	Open in IMG/M
3300032783\|Ga0335079_11928041	Not Available	571	Open in IMG/M
3300033808\|Ga0314867_041697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. OR16	1078	Open in IMG/M
3300033808\|Ga0314867_066720	Not Available	838	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.70%
Host-Associated	Host-Associated	6.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.55%
Plants	Host-Associated → Plants	6.30%
Aquatic	Environmental → Aquatic	3.15%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.57%
Peat	Environmental → Terrestrial → Peat	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.08%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.02%
Loam	Environmental → Terrestrial → Soil → Loam	8.66%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.15%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.15%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	53.54%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.09%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.30%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.15%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.36%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.15%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.15%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.15%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.15%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.94%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	3.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.36%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.57%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.79%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.79%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.79%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300001403	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005524	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen10_05102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012011	Permafrost microbial communities from Nunavut, Canada - A30_65cm_6M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013765	Permafrost microbial communities from Nunavut, Canada - A30_80cm_6M	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025588	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028666	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030738	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assembly	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_02436930	2199352025	Soil	ENAMRISRISRIARRVAGVVSDMNYAARRRGELFLGLRGDQR
JGI20205J14842_10004675	3300001403	Arctic Peat Soil	MTAIARIARRVASVVNEMNYAQRRTTELFLGLDENRR*
Ga0066809_101988261	3300005168	Soil	MAMTAIARIARRVASVVDEMNYAQRRTLELFLGLDEDRR*
Ga0066810_100767961	3300005169	Soil	MAMTVIARIARRVASVVDEMNYAQRRTLELFLGLDEDRR*
Ga0066810_101144381	3300005169	Soil	MAMTAIARIARRVASVVDEMNYAQRRTLELFLGLDENRR*
Ga0066679_106139811	3300005176	Soil	MAMTAIVRIARRVASVVEEMNYAQRRTTELFLGLGENRR*
Ga0070737_1001429211	3300005524	Surface Soil	MTKIMRVARRIASVVDEMNYAQRRTTELFLGLDEKRR*
Ga0070737_100176077	3300005524	Surface Soil	MSTIKRMARRVAGVVAEMNYAQRRSTELFLGLEDRH*
Ga0070741_103155802	3300005529	Surface Soil	MKIARIARRVASVVDEMNYAQRRSMELFLGLDENRR*
Ga0070665_1005028042	3300005548	Switchgrass Rhizosphere	MTAIRRIVRRVASVVDEMNYAQRRTVELFLGLDEHRR*
Ga0066695_106914341	3300005553	Soil	MTVIARIARRVASVVDEMNYAQRRTTELFLGLDGNRR*
Ga0068855_1019760642	3300005563	Corn Rhizosphere	MRISRIARRVASVVSDMNYAQRRRDELFLGLRGDQR*
Ga0068857_1009207302	3300005577	Corn Rhizosphere	MRISRIARRVASVVSDMNYAQRRRDELFAGLRADQR*
Ga0066903_1004898232	3300005764	Tropical Forest Soil	MRISRIARRVADVVSEMNYAQRRRDQLFAGLREDQR*
Ga0066903_1037530961	3300005764	Tropical Forest Soil	MSAIARIVRRVAGVVEEMNYAQRRSTELFLELDGDRR*
Ga0080026_100392182	3300005952	Permafrost Soil	MTAIARIARRVASVVNEMNYAQRRTTELFLGLDQNRR*
Ga0066790_1000089315	3300005995	Soil	MTAIRRIVRRVASVVDDMNYAQRRTTELFLGLGENRR*
Ga0066790_100735913	3300005995	Soil	MTAITRIVRRVASMVDEMNYAHRRSMGLPGPGKNRR*
Ga0066790_103052632	3300005995	Soil	MTTIARLARRVASVVDEINYAQRRSMELFLGLDENRR*
Ga0070717_100599861	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTAITRIVRRVASVVDEMNYAQRRTVELFLGLDENRR*
Ga0070717_100792763	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRISRIARRVASVVSDMNYAQRRRDELFMGLRAGQR*
Ga0070717_104824942	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRISRIARRVASVVSDMNYAQRRRDELFLGLREDQR*
Ga0070717_109108482	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRISQIARRVAGVVSDMNYAQRRRDELFTGLRAGQR*
Ga0070712_1011637731	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RTAMRISRIARRVASVVSDMNYAQRRRDELFMGLRAGQR*
Ga0074051_100112912	3300006572	Soil	MTAIARIARRVASVVDEMNYAQRRTLELFLGLDKNRR*
Ga0074056_115421762	3300006574	Soil	MTAIARIARRVASVVDEMNYAQRRTLELFLGLDENRR*
Ga0074047_120519631	3300006576	Soil	MTAIARIARRVASVVDEMNYAQRRALELFLGLDENRR*
Ga0074048_124068261	3300006581	Soil	MKAIARIARRVASAVDEMNYAQRRSMELFLGLDEKRR*
Ga0079221_102066692	3300006804	Agricultural Soil	MTAITRIVRRVASVVNEMNYAQRRSVELFLGLDENRR*
Ga0073928_107100821	3300006893	Iron-Sulfur Acid Spring	MIAITRIARRVASVVGEMNYAQRRTMELLQGRDGNRR*
Ga0075426_101418722	3300006903	Populus Rhizosphere	MRISRIARRVASVVSDMNYAQRRRDELFAGLRGDQR*
Ga0099794_104220421	3300007265	Vadose Zone Soil	MTTIARIARRVASVVDEMNYAQRRTMELFLGLGENRR*
Ga0102924_11576551	3300007982	Iron-Sulfur Acid Spring	MIAITRIARRVASVVAEMNYAQRRTMELFLGLDANRR*
Ga0099829_108061562	3300009038	Vadose Zone Soil	MTIARIARRVASVVDEMNYAQRRTMELFLGLGENRR*
Ga0099829_112222371	3300009038	Vadose Zone Soil	MTAIARIARRVASVVDDMNYAQRRTMELFLGLGEDRR*
Ga0099828_118015611	3300009089	Vadose Zone Soil	MTAIARIARRVASVVDEMNYAQRRTMELFLGLGENRR*
Ga0099827_102642243	3300009090	Vadose Zone Soil	MAMTAITRIARRVASVVEEMNYAQRRTTELFLGLGENRR*
Ga0099827_116871251	3300009090	Vadose Zone Soil	MTAITRIARRVASVVDEMNYAQRRTTELFLGLGENRR*
Ga0105247_103196931	3300009101	Switchgrass Rhizosphere	MTAITRIVRRVASVVDEMNYAQRRKVELFLGLDEHRR*
Ga0066709_1011126512	3300009137	Grasslands Soil	MRISGIARRVASVVGDMNYAQRRSTELFVGLRGDRR*
Ga0099792_112592441	3300009143	Vadose Zone Soil	MTAIARIARRVASVVDDMNYAQRRTMELFLGPDGNRR*
Ga0116216_107035491	3300009698	Peatlands Soil	MAMTAIVRIARRVASVVDEMNYAQRKTMELFLGLDENRR*
Ga0126380_101756142	3300010043	Tropical Forest Soil	MSISKIARRVASVVSDMNYAQRRRDQLFAGLREDQR*
Ga0134067_102478202	3300010321	Grasslands Soil	MTAIVRIARRVASVVDEMNYAQRRTMELFLGLDENR*
Ga0134065_102424302	3300010326	Grasslands Soil	MTVIARIARRVASVVDEMNYAQRRTMELFLGLDGNRR*
Ga0126370_102903702	3300010358	Tropical Forest Soil	MRISRIARRVASVVGEMNYAQRRRDQLFAGLREDQR*
Ga0134125_101446452	3300010371	Terrestrial Soil	MTAITRIVRRVASVVDEMNYAQRRTVELFLGLDEHRR*
Ga0136449_1025464832	3300010379	Peatlands Soil	MAMTAIVRIVRRVASVVDEMNYAQRRTMELFLGLDENRRR*
Ga0134126_101765562	3300010396	Terrestrial Soil	MTAIRRIVRRVASVVDEMNYAQRRTVELFLGLDENRR*
Ga0126383_115401831	3300010398	Tropical Forest Soil	MRISRIARRVAGVVSEMNYAQRRRDELFAGLREDQR*
Ga0137392_111890292	3300011269	Vadose Zone Soil	MAMTAIARIARRVASVVDEMNYAQRRTMELFLGLGENRR*
Ga0120134_10443952	3300012004	Permafrost	MAMTAITRIARRVASVVNEMNYAQRRTTELFLGLDENRR*
Ga0120152_10415653	3300012011	Permafrost	MAMTITRIARRVASVVEEMNYAQRRATELFLGLGENRR*
Ga0137364_109308432	3300012198	Vadose Zone Soil	MTAIAQIARRMASVVDEMNYAQRRTMELFLGLDGNRR*
Ga0137383_100669262	3300012199	Vadose Zone Soil	MTAIARIARRVASVVEEMNYAQRRSMELFLGLGENRR*
Ga0137383_103868992	3300012199	Vadose Zone Soil	MTAIVRIARRVASVVDEMNYAQRRTMELFLGLDENRG*
Ga0137365_100581303	3300012201	Vadose Zone Soil	MTAIARIARRVASVVDEMNYAQRRTTELFLGLGENRR*
Ga0137365_101405611	3300012201	Vadose Zone Soil	MTAIARIARRVASVVDEMNYAQRRTTELFLGLDGNRR*
Ga0137365_103200932	3300012201	Vadose Zone Soil	MAMTAIARIARRVASVVDDMNYAQRRTTELFLGLGEDRR*
Ga0137374_100406241	3300012204	Vadose Zone Soil	MTAIARIARRVASVVDEMNYAQRRTMELFLGLDENRR*
Ga0137380_100216008	3300012206	Vadose Zone Soil	MTAIMRIARRVASVVDEMNYAQRRTTELFLGLDENRR*
Ga0137380_100229863	3300012206	Vadose Zone Soil	MTAIVRIARRVASVVDEMNYAQRRTMELFLGLDENWR*
Ga0137380_100253525	3300012206	Vadose Zone Soil	MTAIARIARRVASVVDGMNYAQRRTMELFLGLDGNQG*
Ga0137380_100423913	3300012206	Vadose Zone Soil	MTAITRIARRVASVVDEMNYAQRRTMELFLGLGEDRR*
Ga0137380_101177242	3300012206	Vadose Zone Soil	MTAIVRIARRVASVVDEMNYAQRRTMELFLGLGENRR*
Ga0137380_114046112	3300012206	Vadose Zone Soil	MTAIARIARRVASVVDEMNYAQRRTMELFLGLDEN
Ga0137381_111758891	3300012207	Vadose Zone Soil	MTAITRIARRVASVVDEMNYAQRRTMELFLGLDENWR*
Ga0137379_100866415	3300012209	Vadose Zone Soil	MAMTAIARIARRVASVVDEMNYAQRRTMELFLGLDENRR*
Ga0137370_105904442	3300012285	Vadose Zone Soil	MTVIAQIARRVASVVDEMNYAQRRTMELFLGLDGNRR*
Ga0137372_105443522	3300012350	Vadose Zone Soil	MTAIARIARRVASVVDEMNYAQHRTMELFLGLDENRR*
Ga0137372_106888132	3300012350	Vadose Zone Soil	MAMTAITRIARRVASVVDEMNYAQRMTTELFLGLHENRR*
Ga0137372_111497982	3300012350	Vadose Zone Soil	MTAIARIARRVASVVDEMNYAQRRTMELFLGLDGNRR*
Ga0137386_100829123	3300012351	Vadose Zone Soil	MTAIARIARRVASVVDGMNYAQRRTMELFLGLDENRR
Ga0137386_107874161	3300012351	Vadose Zone Soil	MAMTVIARIARRVASVVDEMNYAQRRTTELFLGLGENRR*
Ga0137371_100504564	3300012356	Vadose Zone Soil	MTAIAQIARRVASVVDEMNYAQRRTTELFLGLDGNRR*
Ga0137384_113373101	3300012357	Vadose Zone Soil	MAMTAITRIARRVASVVDEMNYAQRRTTELFLGLGDNRR*
Ga0137385_100100046	3300012359	Vadose Zone Soil	MTTIVRIARRVASVVDEMNYAQRRTMELFLGLDENWR*
Ga0137385_105179151	3300012359	Vadose Zone Soil	MTAIMRIARRVASVVDEMNYAQRRTTELFLGLDGNRR*
Ga0137398_103643472	3300012683	Vadose Zone Soil	MITIKRIARRVASVVDDMNYAQRRTMELFLDLDGHRR*
Ga0137395_107977991	3300012917	Vadose Zone Soil	MTAIARIARRVASVVEEMNYAQRRTTELFLGLDENRR*
Ga0137404_103611971	3300012929	Vadose Zone Soil	MTAIGRIVRRVASVVDDMNYAQRRIMELSRVGKNHR*
Ga0137407_109735142	3300012930	Vadose Zone Soil	MRISRIARRVASVVGDMNYAQRRSTELFAGLRGDRR*
Ga0164301_110130962	3300012960	Soil	MRISRIARRVASVVNEMNYAQRRRDELFLGLRGDQR*
Ga0164305_115173802	3300012989	Soil	MRISQIARRVAGVVSDMNYAQRRRDELFLGLRGDQR*
Ga0120172_11213581	3300013765	Permafrost	TITRIVRRVASVVEEMNYAQRRATELFLGLGENRR*
Ga0182018_101569872	3300014489	Palsa	MTTIARIARRVASVVDEINYAQRRSMELFLGHDQNRR*
Ga0182024_109121532	3300014501	Permafrost	MTTIARIARRVASVVDEINYAQRRSMELFLGLDENRR*
Ga0120104_10477712	3300014829	Permafrost	MKAIVRIARRVVSVVDEMNYAQRRSTELFLGLDENRR*
Ga0137403_111199772	3300015264	Vadose Zone Soil	AMTTIARIARRVASVVDEMNYAQRRTMELFLGLGENRR*
Ga0193726_12073762	3300020021	Soil	MTIARIARRVANVVKEMNYAQRRTTELFLGLDETRR
Ga0210387_109158202	3300021405	Soil	MTAIARIARRVASVVDEMNYAQRRTTELFLGLGENRR
Ga0126371_102142993	3300021560	Tropical Forest Soil	MSAIARIVRRVAGVVEEMNYAQRRSTELFLELDGDRR
Ga0126371_103010582	3300021560	Tropical Forest Soil	MRISRIARRVAGVVSEMNYAQRRRDQLFAGLREDQR
Ga0242664_10228021	3300022527	Soil	GRRNERSIAMTAIVRVARRVASVVGEMNYAQRRMTELFMGLDENQR
Ga0212123_101348182	3300022557	Iron-Sulfur Acid Spring	MIAITRIARRVASVVGEMNYAQRRTMELLQGRDGNRR
Ga0212123_103746181	3300022557	Iron-Sulfur Acid Spring	MIAITRIARRVASVVAEMNYAQRRTMELFLGLDANRR
Ga0208356_10048613	3300025504	Arctic Peat Soil	MTAIARIARRVASVVNEMNYAQRRTTELFLGLDQNRR
Ga0208586_10683461	3300025588	Arctic Peat Soil	RSMAMTAIARIARRVASVVNEMNYAQRRTTELFLGLDQNRR
Ga0208589_10355882	3300025634	Arctic Peat Soil	MTTIARIARRVASVVDEINYAQRRSMELFLGLDENRR
Ga0207653_101384271	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MTAIARIARRVASVVDEMNYAQRRTVELFLGLDEHRR
Ga0207692_110209802	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RDGRCEERSIAMTAITRIVRRVASVVDEMNYAQRRTVELFLGLDENRR
Ga0207684_105491591	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTAIVRIARRVASVVDEMNYAQRRTMELFLGLDENRG
Ga0207693_105269161	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	TAITRIVRRVASVVDEMNYAQRRTVELFLGLDEHRR
Ga0209871_10093262	3300026217	Permafrost Soil	MTTIMRIARRVASVVGDMNYAQRRTTELFLGLGENRR
Ga0209871_10226622	3300026217	Permafrost Soil	MTAIARIARRVASVVSEMNYAQRRTTELFLGLDQNRR
Ga0209839_100007665	3300026294	Soil	MTAIRRIVRRVASVVDDMNYAQRRTTELFLGLGENRR
Ga0209839_102517141	3300026294	Soil	MTAITRIVRRVASMVDEMNYAHRRSMGLPGPGKNRR
Ga0257164_10239852	3300026497	Soil	MTTIARIARRVASVVDEMNYAQRRTMELFLGLGENRR
Ga0208890_10014863	3300027523	Soil	MTVIARIARRVASVVDEMNYAQRRTLELFLGLDENRR
Ga0209908_102137691	3300027745	Thawing Permafrost	MTTIARIARRVASVVDEINYAQRRSMELFLGHDQNRR
Ga0209590_106676021	3300027882	Vadose Zone Soil	MTAITRIARRVASVVEEMNYAQRRTTELFLGLGENRR
Ga0268266_105393012	3300028379	Switchgrass Rhizosphere	MTAIRRIVRRVASVVDEMNYAQRRTVELFLGLDEHRR
Ga0265336_101465011	3300028666	Rhizosphere	MAMTAIGRIVRRVASVMDDLNYAQRRATELFLGLGGNRR
Ga0307282_105937371	3300028784	Soil	MTAITRIARRVASVVEEMNYAQRRSMELFLGLDENRR
Ga0265338_100019916	3300028800	Rhizosphere	MTAIGRIVRRVASVMDDLNYAQRRATELFLGLGGNRR
Ga0311371_111507682	3300029951	Palsa	MTAMTRIARRVMSVLDEMNYAQRRTAELFLGLDGSQR
Ga0307482_11691312	3300030730	Hardwood Forest Soil	EGRCDERSMAMNAIKRIARRVASVVEEMNYAQRRSTELFLGLGRNR
Ga0265462_117599122	3300030738	Soil	AMSTIKRMARRMASVVNEMNYATTELFLGHDKNHG
Ga0310915_100890031	3300031573	Soil	GRFARIVRRVASVVEEMNYAQRRSVELFLGLDERPR
Ga0318543_103925921	3300031777	Soil	SGRFARIVRRVADVVEEMNYAQRRSVELFLGLDERP
Ga0308174_113045102	3300031939	Soil	MRISRIARRVASVVSDMNYAQRRRDELFTGLRGDRR
Ga0311301_104309002	3300032160	Peatlands Soil	MTAIVRIARRVASVVDEMNYAQRKTMELFLGLDENRR
Ga0311301_130598782	3300032160	Peatlands Soil	MTAIVRIVRRVASVVDEMNYAQRRTMELFLGLDENRRR
Ga0307470_114353171	3300032174	Hardwood Forest Soil	GRRDGRCEERSIAMTAITRIVRRVASVVDEMNYAQRRTVELFLGLDENRR
Ga0335079_119280411	3300032783	Soil	MSAIARIARRVASVVGEMNYAQRRTTELFLGLDEHRH
Ga0314867_041697_1_108	3300033808	Peatland	MAMIAIVRIARRVASVVDDMNYAQRRTMERFLGLDE
Ga0314867_066720_115_234	3300033808	Peatland	MAMIAIVRIARRVASVVDDMNYAQRRTMERFLGLDENRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066001

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences