NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F066015

Metagenome Family F066015

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F066015
Family Type Metagenome
Number of Sequences 127
Average Sequence Length 77 residues
Representative Sequence MKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALELLERTLKRDRVYEKRISLDCIAYGTEETTNAYFE
Number of Associated Samples 103
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 7.09 %
% of genes near scaffold ends (potentially truncated) 93.70 %
% of genes from short scaffolds (< 2000 bps) 92.91 %
Associated GOLD sequencing projects 99
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.213 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.323 % of family members)
Environment Ontology (ENVO) Unclassified
(30.709 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(44.882 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 42.57%    β-sheet: 0.00%    Coil/Unstructured: 57.43%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF00326Peptidase_S9 56.69
PF07676PD40 3.94
PF03473MOSC 0.79
PF00583Acetyltransf_1 0.79
PF13378MR_MLE_C 0.79
PF07585BBP7 0.79


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.21 %
UnclassifiedrootN/A0.79 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000597|AF_2010_repII_A1DRAFT_10152221All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia556Open in IMG/M
3300000793|AF_2010_repII_A001DRAFT_10033210All Organisms → cellular organisms → Bacteria1204Open in IMG/M
3300000890|JGI11643J12802_12338169All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1008Open in IMG/M
3300000955|JGI1027J12803_100915616Not Available591Open in IMG/M
3300000955|JGI1027J12803_103904338All Organisms → cellular organisms → Bacteria838Open in IMG/M
3300000955|JGI1027J12803_105642897All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia655Open in IMG/M
3300004463|Ga0063356_104344148All Organisms → cellular organisms → Bacteria610Open in IMG/M
3300004633|Ga0066395_10431535All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300005178|Ga0066688_10196213All Organisms → cellular organisms → Bacteria1280Open in IMG/M
3300005180|Ga0066685_10768048All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria656Open in IMG/M
3300005289|Ga0065704_10224796All Organisms → cellular organisms → Bacteria1060Open in IMG/M
3300005295|Ga0065707_10864842All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia575Open in IMG/M
3300005331|Ga0070670_101773280All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium568Open in IMG/M
3300005332|Ga0066388_100550627All Organisms → cellular organisms → Bacteria1783Open in IMG/M
3300005332|Ga0066388_101376648All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1223Open in IMG/M
3300005332|Ga0066388_102433662All Organisms → cellular organisms → Bacteria950Open in IMG/M
3300005332|Ga0066388_103031572All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium858Open in IMG/M
3300005332|Ga0066388_104071112All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300005332|Ga0066388_106261652All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia600Open in IMG/M
3300005332|Ga0066388_106720539All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia579Open in IMG/M
3300005335|Ga0070666_10642671All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia776Open in IMG/M
3300005356|Ga0070674_100554851All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300005434|Ga0070709_11679441All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia518Open in IMG/M
3300005435|Ga0070714_100079270All Organisms → cellular organisms → Bacteria2855Open in IMG/M
3300005437|Ga0070710_10129923All Organisms → cellular organisms → Bacteria1535Open in IMG/M
3300005457|Ga0070662_101497870All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia582Open in IMG/M
3300005559|Ga0066700_10643882All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium734Open in IMG/M
3300005559|Ga0066700_11017289All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia544Open in IMG/M
3300005574|Ga0066694_10397445All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria649Open in IMG/M
3300005576|Ga0066708_10751040All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria615Open in IMG/M
3300005764|Ga0066903_100558334All Organisms → cellular organisms → Bacteria1966Open in IMG/M
3300006028|Ga0070717_10082893All Organisms → cellular organisms → Bacteria2695Open in IMG/M
3300006175|Ga0070712_100166385All Organisms → cellular organisms → Bacteria1707Open in IMG/M
3300006175|Ga0070712_101389628All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300006796|Ga0066665_10690727All Organisms → cellular organisms → Bacteria809Open in IMG/M
3300007788|Ga0099795_10129911All Organisms → cellular organisms → Bacteria1015Open in IMG/M
3300009162|Ga0075423_10859735All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia961Open in IMG/M
3300009545|Ga0105237_10922104All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300010047|Ga0126382_11006417All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia731Open in IMG/M
3300010048|Ga0126373_11063523All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia875Open in IMG/M
3300010048|Ga0126373_13251663All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia506Open in IMG/M
3300010303|Ga0134082_10224458All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia774Open in IMG/M
3300010322|Ga0134084_10085022All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia989Open in IMG/M
3300010359|Ga0126376_13259026All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia502Open in IMG/M
3300010360|Ga0126372_12549588All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium563Open in IMG/M
3300010361|Ga0126378_10680244All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300010361|Ga0126378_13024824All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia536Open in IMG/M
3300010361|Ga0126378_13425928All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia503Open in IMG/M
3300010366|Ga0126379_10613772All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300010366|Ga0126379_12381095All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia629Open in IMG/M
3300010376|Ga0126381_103404518All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia626Open in IMG/M
3300010868|Ga0124844_1249097All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia625Open in IMG/M
3300012021|Ga0120192_10024650All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300012205|Ga0137362_10563793All Organisms → cellular organisms → Bacteria983Open in IMG/M
3300012206|Ga0137380_10268027All Organisms → cellular organisms → Bacteria1536Open in IMG/M
3300012209|Ga0137379_10862142All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300012209|Ga0137379_11728593All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia522Open in IMG/M
3300012285|Ga0137370_10811702All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300012353|Ga0137367_10880097All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia618Open in IMG/M
3300012355|Ga0137369_10922926All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium585Open in IMG/M
3300012512|Ga0157327_1062093All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia560Open in IMG/M
3300012911|Ga0157301_10317713All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia575Open in IMG/M
3300012912|Ga0157306_10035064All Organisms → cellular organisms → Bacteria1175Open in IMG/M
3300012923|Ga0137359_11003846All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300012930|Ga0137407_12041063All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia547Open in IMG/M
3300012944|Ga0137410_10273179All Organisms → cellular organisms → Bacteria1331Open in IMG/M
3300012948|Ga0126375_10314342All Organisms → cellular organisms → Bacteria1094Open in IMG/M
3300012948|Ga0126375_11520830All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia573Open in IMG/M
3300012961|Ga0164302_10229075All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1165Open in IMG/M
3300012961|Ga0164302_11711994All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia527Open in IMG/M
3300012988|Ga0164306_11361052All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia602Open in IMG/M
3300013760|Ga0120188_1012639All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300014056|Ga0120125_1183161All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia518Open in IMG/M
3300014325|Ga0163163_11556155All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300014969|Ga0157376_11435662All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia722Open in IMG/M
3300015371|Ga0132258_12333440All Organisms → cellular organisms → Bacteria1341Open in IMG/M
3300015372|Ga0132256_103011932All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium566Open in IMG/M
3300015372|Ga0132256_103865351All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia504Open in IMG/M
3300015373|Ga0132257_100109751All Organisms → cellular organisms → Bacteria3188Open in IMG/M
3300015373|Ga0132257_100129393All Organisms → cellular organisms → Bacteria2939Open in IMG/M
3300015373|Ga0132257_102670473All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium650Open in IMG/M
3300016341|Ga0182035_10923487All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300018027|Ga0184605_10227919All Organisms → cellular organisms → Bacteria846Open in IMG/M
3300018051|Ga0184620_10226039All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300018054|Ga0184621_10243213All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300018066|Ga0184617_1182249All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300018072|Ga0184635_10167201All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300018073|Ga0184624_10125873All Organisms → cellular organisms → Bacteria1113Open in IMG/M
3300019866|Ga0193756_1044062All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium618Open in IMG/M
3300019876|Ga0193703_1019290All Organisms → cellular organisms → Bacteria1045Open in IMG/M
3300019881|Ga0193707_1086023All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300019881|Ga0193707_1109004All Organisms → cellular organisms → Bacteria818Open in IMG/M
3300019883|Ga0193725_1125607All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia579Open in IMG/M
3300019999|Ga0193718_1054151All Organisms → cellular organisms → Bacteria871Open in IMG/M
3300020000|Ga0193692_1009085All Organisms → cellular organisms → Bacteria2467Open in IMG/M
3300020005|Ga0193697_1084664All Organisms → cellular organisms → Bacteria → Proteobacteria769Open in IMG/M
3300020015|Ga0193734_1064184All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300020059|Ga0193745_1098013All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300020062|Ga0193724_1040203All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300020199|Ga0179592_10100175All Organisms → cellular organisms → Bacteria1331Open in IMG/M
3300021344|Ga0193719_10294548All Organisms → cellular organisms → Bacteria681Open in IMG/M
3300021560|Ga0126371_10501813All Organisms → cellular organisms → Bacteria1361Open in IMG/M
3300021560|Ga0126371_10592960All Organisms → cellular organisms → Bacteria1257Open in IMG/M
3300022756|Ga0222622_10011795All Organisms → cellular organisms → Bacteria4182Open in IMG/M
3300022756|Ga0222622_10044419All Organisms → cellular organisms → Bacteria2469Open in IMG/M
3300023058|Ga0193714_1012792All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1268Open in IMG/M
3300025315|Ga0207697_10363943All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia642Open in IMG/M
3300025898|Ga0207692_10866530All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia593Open in IMG/M
3300025905|Ga0207685_10666538All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia564Open in IMG/M
3300025936|Ga0207670_10154887All Organisms → cellular organisms → Bacteria1704Open in IMG/M
3300026095|Ga0207676_10202568All Organisms → cellular organisms → Bacteria1755Open in IMG/M
3300026538|Ga0209056_10125053All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2030Open in IMG/M
3300026548|Ga0209161_10310548All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300027874|Ga0209465_10209554All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia973Open in IMG/M
3300028379|Ga0268266_12005373All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia552Open in IMG/M
3300028796|Ga0307287_10243173All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300028810|Ga0307294_10191697All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300028876|Ga0307286_10053221All Organisms → cellular organisms → Bacteria1376Open in IMG/M
3300031446|Ga0170820_10048162All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia551Open in IMG/M
3300031446|Ga0170820_13534322All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia654Open in IMG/M
3300031716|Ga0310813_11574944All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300031719|Ga0306917_10631366All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300031913|Ga0310891_10129680All Organisms → cellular organisms → Bacteria802Open in IMG/M
3300032035|Ga0310911_10451968All Organisms → cellular organisms → Bacteria744Open in IMG/M
3300032076|Ga0306924_10227268All Organisms → cellular organisms → Bacteria2143Open in IMG/M
3300032180|Ga0307471_100421560All Organisms → cellular organisms → Bacteria1467Open in IMG/M
3300033289|Ga0310914_10661644All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium939Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.32%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil11.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.24%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.45%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil8.66%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.51%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.72%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.15%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.15%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.36%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.36%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.57%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.57%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial1.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.57%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.57%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.79%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.79%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.79%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.79%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.79%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.79%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.79%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.79%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300000793Forest soil microbial communities from Amazon forest - 2010 replicate II A001EnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005289Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2Host-AssociatedOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010868Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)EnvironmentalOpen in IMG/M
3300012021Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T1EnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012512Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510Host-AssociatedOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013760Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2EnvironmentalOpen in IMG/M
3300014056Permafrost microbial communities from Nunavut, Canada - A20_5cm_0MEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018051Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300019866Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1m1EnvironmentalOpen in IMG/M
3300019876Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300019999Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1EnvironmentalOpen in IMG/M
3300020000Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1EnvironmentalOpen in IMG/M
3300020005Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2EnvironmentalOpen in IMG/M
3300020015Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1EnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300023058Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026548Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028810Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031913Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AF_2010_repII_A1DRAFT_1015222113300000597Forest SoilMNCFFRVNAIAVAALIVISPITAPANPRSHPLNEDAALEQLQRTLKRDGVYEKRISLDCVEYGTEETTKSYFEFVLREIHNAKCGGDLETSHVLDR
AF_2010_repII_A001DRAFT_1003321013300000793Forest SoilMNCVFRINAVAAAALILLSPITVPANPRSHPLNEDAALELLQRTLKRDHVYEKRISLDCIAYGTEETTNAYFEFV
JGI11643J12802_1233816923300000890SoilMKIEFRLVTAAVVATIVISTTIAQGGSRSHPLDEDAAVGLLARTLKHDHVYAKRISLGCI
JGI1027J12803_10091561623300000955SoilMKIEFRLITAAVIAAILISVAIAEAARSRPLDEDAAVALLDRTLKRDRVYEKRISLD
JGI1027J12803_10390433833300000955SoilMKIEFRLITAVVAVVLISAAIAESARARPLDEDAALALLQRTIKRDHVYEKRISLDCIAYGTEETTNAYFEF
JGI1027J12803_10564289723300000955SoilMKVEFRLITSGVIAVVLLSPIVAQAGPQSHPLDEDATLELLQRALKRDGVYEKRISMDCIAYGTEETTNAYFEFVLREVHNAK
Ga0063356_10434414813300004463Arabidopsis Thaliana RhizosphereMKIEFRLITAAVIAAILISPIVARAGSLSHPLSEDAALDLLQRSLKRDRVYEKRISMDCIAYGTEE
Ga0066395_1043153533300004633Tropical Forest SoilMNCFFRVNAIAAAALIVISPITAPANPRSHPLNEDAALELLHRTLKRDQVYEKRISLDWISYITEEKTKAYFQFVLREIHNTKCGGVS
Ga0066688_1019621333300005178SoilMKIEFRLIAAVVIAVVLVSPAVTEAARSRPLDEDAALALLERTLKHDRVYDKRISWDCISFGTEETTDAYFGFVVREIHNAKC
Ga0066685_1076804823300005180SoilMKIEFRLITGAVIAVVLISPIVARAGSRSHLLSEDAALDLLQRTLKRDRVYEKQISLDCIEYGTEETTNAYFEFVLRGIHNTKCGGDPETS
Ga0065704_1022479633300005289Switchgrass RhizosphereMKIEFRLVTAAVVATIVISTTIAQGGSRSHPLDEDAAVGLLARTLKHDHVYAKRISLG
Ga0065707_1086484223300005295Switchgrass RhizosphereMKIEFRLIAAAVIAAILISPTVVRAGSRSHPLSEDAALDLLQRTLKRDRVYEKRISLDCIAYGTEETTNTYFEFVLREIHNTKCGGGS*
Ga0070670_10177328023300005331Switchgrass RhizosphereMKIEFHLITAVIAVVFISSAVADRPRSKSLNEDTALDLLQRTLKRDRVYEKRISLDCVE
Ga0066388_10055062733300005332Tropical Forest SoilMKIEFSLITAAVIAVVLISPAVAEGARSRPLDEDGALALLERTLKRDHIYERRISMDCIA
Ga0066388_10137664823300005332Tropical Forest SoilMKIEFHLITAVIVVVLALAVVAEAAPSRPLDEDGAVALLERSLKRDKVYEKRISLGCISYDTEETTKAYFQFV
Ga0066388_10243366233300005332Tropical Forest SoilMKIELRLVTTVIAVVLISTAVTKATPSRPLDEDAAVELLHRTLKRDKVYEKRISLDCISYITEETTKSYFGFVS*
Ga0066388_10303157223300005332Tropical Forest SoilMKIEFRVITATVVALVLVSAAIAEGARSRPLDEDAALALLDRTLKHDHVYDGVHHISLNCVFYMTEEMTDAYFDFVLREKHDG
Ga0066388_10407111233300005332Tropical Forest SoilMTIVECRTIKPAFFMKIEFHLITAVIAVVLASAAVAEAAPSRPLDEDAALTLLHRTLKRDQVYEKRISLD
Ga0066388_10626165223300005332Tropical Forest SoilMKIEFHLITAVIAVVLTSAVVAEAAPSRPLDEDAALALLHRTLKRDQVYEKRISLDCISYITEEKTKAYFQFVLREIHNTKCGGVPEVSPVID
Ga0066388_10672053923300005332Tropical Forest SoilVKIEFRVITATAVALVLVSATVAEGARSRPLDEDAALALLNRTLKHDHVYDGVHHISLNCVFYMTEEMTDAYFDFVLREKHDG
Ga0070666_1064267123300005335Switchgrass RhizosphereMKIEFRLITAAVIAAILISPIVARAGSQSYPLSEDAALDLLDRTLKRDRVYEKRISLDCIAYGTEETTNAYFEFVLREIHNANAAATLK*
Ga0070674_10055485113300005356Miscanthus RhizosphereLMKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALDLLDRTLKRDRVYEKRISLDCIAYGTEETTNAYFEFVLREIHNANAAATLK*
Ga0070709_1167944113300005434Corn, Switchgrass And Miscanthus RhizosphereMKIDFRLVRAFSAVVLISVAIAEGARSRPLDEDAALALLGRTLKHDHVYEKRVSLDCIAYGTEET
Ga0070714_10007927013300005435Agricultural SoilMKIEFRAITAALIAAILISPIVARAGSRSHPLSEDAALELLQRTLKRDRVYEKRISLDCIAYGTEETTNAYFEFV
Ga0070710_1012992313300005437Corn, Switchgrass And Miscanthus RhizosphereMKIDFRLVRAFSAVVLISVAIAEGARSRPLDEDAALALLGRTLKHDHVYEKRISLDCIAYGTEETTNAYFEFVLREIHNAKC
Ga0070662_10149787013300005457Corn RhizosphereMKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALDLLHRTLKRDRVYEKRISLDCIAYGTEETT
Ga0066700_1064388213300005559SoilMKIEFRLIAAVVIAVVLVSPAVTEAARSRPLDEDAALALLERTLKHDRVYDKRISWDCISFGTEETTDAYFGFVVREIHNA
Ga0066700_1101728923300005559SoilMKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALDLLQRTLKRDRVYEKRISLDCIAYGTEETTNAYFEFVPREIHNAKCGGD
Ga0066694_1039744513300005574SoilMKIEFRLITGAVIAVVLISPIVARAGSRSHLLSEDAALDLLQRTLKRDRVYEKQISLDCIEYGTEE
Ga0066708_1075104013300005576SoilMKIEFRLIRAAVIATMLISPIVVRAGSRSHPLSEDAALDLLDRTLTRDRVYEKRISLDCIAYGTEETTNAYFEFVLREIHNAKC
Ga0066903_10055833413300005764Tropical Forest SoilMKMDLRLITAVIAVVLASTAVAEAAHSRPLDEDAALALLQRTLRRDQVYEKRISLDCIAYGTEETTNAYFEFVLREIHN
Ga0070717_1008289343300006028Corn, Switchgrass And Miscanthus RhizosphereMKIEFRAITAALIAAILISPIVARAGSRSHPLSEDAALELLQRTLKRDRVYEKRISLDCIAYGTEETTNA
Ga0070712_10016638533300006175Corn, Switchgrass And Miscanthus RhizosphereMKIEFRLITAAVIAAILISPIVARAGSRPHPLSEDAALELLQRTLKRDRVYEKRISLDCIAYGTEETTNAYFEFVLR
Ga0070712_10138962813300006175Corn, Switchgrass And Miscanthus RhizosphereMKIELHLITAAVVAAIFIFISPIVARAGSRPHPLSEDAALELLQRTLKRDRVYEKRISL
Ga0066665_1069072733300006796SoilMKIEFRLITAAVIAAILISPIVVRAGSRSHPLSEDAALDLLDRTLTRDRVYEKRISLDCIAYGTEETTNAYFEFVLREIHNAKCGGDPE
Ga0099795_1012991133300007788Vadose Zone SoilMKIEFRLITAAVIATILISPIVARAGSRSHPLSEDAALALLQRTLKRDRVYEKRISLDCIAY
Ga0075423_1085973513300009162Populus RhizosphereMKCLFRVSPIAAAALILILPITAPANPRSHLLNEDAALELLQRTLKRDHVYEKRTSLDCIAYGTEKTTKTYFEFVLREIHNAK
Ga0105237_1092210433300009545Corn RhizosphereMKIEFRLVTAAVVATIVISTTIAQGGSRSHPLDEDAALDLLARTLKHDHVYAKRISLGCITY
Ga0126382_1100641713300010047Tropical Forest SoilMKIDFRLITAVIAIMLVSAAVAEAAPSRPLDEDAALALLQRSLKRDQVYEKRISLDCVAYGTEETTKAYL
Ga0126373_1106352313300010048Tropical Forest SoilMKIEFPVITAAVIAVVLISAAVAEGARSRPLGEDAALALLKRTLKRDHVYERRISMDCIAYGTEETTDAYIQFVLREIHNAKCGGDPETSPAIDRYRVY
Ga0126373_1325166313300010048Tropical Forest SoilMKIEFHLITAVIVVVLALAVVAEAAPSRPLDEDGAVALLERSLKRDKVYEKRISLGCISYDTEETTKAYFQFVLREIHNAKCGGDPEVSPAFARYRVY
Ga0134082_1022445833300010303Grasslands SoilMKIEFRLITAAVIAAISISPIVVRAGSRSHPLSEDAALNLLDRTLTRDRVYEKRISLDCIAYGTEETTNAYFEFVLREIHNAKCGGDPEVSPIV
Ga0134084_1008502223300010322Grasslands SoilMKIEFRLITAVVIAAILISPIVVRAGSRSHPLSEDAALNLLDRTLTRDRVYEKRISLDCIAYGTEETTNAYFEFVLREIHNTKCGGESRGESNS*
Ga0126376_1325902623300010359Tropical Forest SoilMNCFFRVNAIAAAALIVISPITAPANPRSHPLNEDAAFKLLHRTLKRDQVYEKRISLDWISYITEEKTKAYFQFVLREIHNTKCGGVPEVSPVIDRYRVYRH
Ga0126372_1254958813300010360Tropical Forest SoilMKIEFRVITATVVALVLVSAAIAEGARSRPLDEDAALALLDRTLKHDHVYDGVHHISMNCVFYMTEEMTDAYFDFV
Ga0126378_1068024413300010361Tropical Forest SoilMKIELRRITVVSAVVLVSAAVAEASRSRPLDEDAALALLQRTVKRDGVYEKRISLDCVAYGTEETTKA
Ga0126378_1302482423300010361Tropical Forest SoilMKFEFRLITAAVIAAVLVSAALAGGASSRLLDEDAALAVLDRTLKRDRIYEKRISWDCIAYSTEEKTNAFFEFVLREIHNVKCGGDPETSPA
Ga0126378_1342592813300010361Tropical Forest SoilMKIEFHLITAVIVVVLALAVVAEAAPSRPLDEDGAVALLERSLKRDKVYEKRISLGCISYDTEETTKAY
Ga0126379_1061377233300010366Tropical Forest SoilMKFKFLLSTAAVIAAVLISADVGEGGRSRSLDEDAALALLQRTLKHDHVYEKRISLDCVEYGTEETT
Ga0126379_1238109513300010366Tropical Forest SoilLHLITSVIAVALVSAAVAEAAHSRSLDEDAALALLQRTLKRDQVYEKRISLDCIAYGTEETTNAYFEFVLREIHNTKCRGDSETS
Ga0126381_10340451823300010376Tropical Forest SoilMKFEFRLITAAVIAAVSVSAVLSEGAPSRSLNEDGASEFLQRTFKHDRIYEKRISWDCIAYGTEETTNAFFEFVLREIHNAKCGGDPETSPTIDRY
Ga0124844_124909713300010868Tropical Forest SoilMKIEFRLISAAVIAAILISPIVARAGSQSHPLSEDAALDLLDRTLKRDRVYEKRISLDCIVYGTEETTNAY
Ga0120192_1002465013300012021TerrestrialMKIEFRLITAVAIAGVLISAAVAEGARSRPLDEDGALELLQRTLKRDRVYEKRISLDCVAYGTEETTATPFEF
Ga0137362_1056379313300012205Vadose Zone SoilMKIEFRLITAAVIAAILISPIVARAGSRSHQLSEDAALDLLDRTLTRDRVYEKRISLDCIAYGTEETTNAYFEFLLREIHNAKCGGDPETSP
Ga0137380_1026802713300012206Vadose Zone SoilMKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALDLLQRTLKRDRVYEKRISLDCIAYGTEE
Ga0137379_1086214233300012209Vadose Zone SoilMKMEFHLITAAVIAAILISPIVVRAGSRSHPLSEDAASDLLERTLKRDRVYEKRISLDCIAYG
Ga0137379_1172859313300012209Vadose Zone SoilMSKASLLITAAVIAVVLVSPAVAQAGPRSRPLDEDAALALLVRTLKHDRVYAKRISLDCISYVTEETTSAYFQFVLR
Ga0137370_1081170233300012285Vadose Zone SoilMKIEYRLITAAVIAAILISPIVVRAGSRSHPLSEDAALDLLQRTLKRDRVYEKRISLDCIAYGAKETTNT
Ga0137367_1088009733300012353Vadose Zone SoilMKIEFRLITAAVIAAILISPIVVRDSSRSHPLSEDAALNLLDRTLKRDRVYEKRISLGWFTCDTEETTNAYFQFALREKHDA
Ga0137369_1092292613300012355Vadose Zone SoilMKIELRLVTAAVIAAILISPIVARAGSRSHPLSEDAALDLLDRTLTRDRVYEKRISLDCIAYGTEETT
Ga0157327_106209313300012512Arabidopsis RhizosphereMKIEFRLITASIAIVLISAAIAEGARSRPLDEDAALALLERTLKQDHVYEKRISLNCIAYGTEETTNAYFEFVLREIHNVKCSGDPETSPAIDRYRVY
Ga0157301_1031771313300012911SoilMKIELRLITAVVAVVLVSAAVAEATPSRLLDEDAALALLQRTLKRDQVYEKRISLDCVAYGTEEMAKAYFEFVLREIHNAKCGGDPDTSPAI
Ga0157306_1003506433300012912SoilMKIEFRLITAAVIAGILISPIVTGAGSRSHPLSEDAALDLLQRTLKRDRVYDKRISLDCIAY
Ga0137359_1100384613300012923Vadose Zone SoilMKIEFRMITAAVIATILISPIVARAGSRSHPLSEDAALDLLNRKITRDGVYEKRISLDCIAY
Ga0137407_1204106333300012930Vadose Zone SoilMKIEFRVITAAVIAAILISPIVVRAGSRSHPLSEDAALNLLDRTLTRDRVYEKRISLDCIAYGTEETTN
Ga0137410_1027317933300012944Vadose Zone SoilMKIEFRLITVTVIAAILISPIVAPAGSRSDPLSEDAALDLLERTLKRDRVYEKRISLDCIAYGTEETTNAYFEFVLREIHKAKCGGDPETSPA
Ga0126375_1031434233300012948Tropical Forest SoilLRDQIARLTRKIEFRLITAAVMAIVLASVAVAEGARSRPLDEDAALGLLNRTLKHDHVYDGVHHISLKCVFYMTEETTDAYFAFVLREKHDAKCGG
Ga0126375_1152083023300012948Tropical Forest SoilMKIDFRLITAVIAVMLVSAAVAEAAPSRPLDEDAALVLLQRSLKRDQVYEKRISLDCVAYGTEETTKAYFGFVLREIHNA
Ga0164302_1022907543300012961SoilMKMDLRLITAVIAVVLASAAVAEAAHSRPLDEDAALALLQRTLKRDQVYEKRISLDCIAYGTEETTNGYFEFVLRETHNTKCGGDPEISPAIDR
Ga0164302_1171199413300012961SoilMKIQFRLITAAVIAGILISPIAAPADTRSRPLNEDAAVNLLERTLKRDRVYEKRISLDCIAYGTEETTNAFFEFVLREIHN
Ga0164306_1136105213300012988SoilMKIEFRLITAAVIAAILISPIVARAGSRSNPLSEDAALDLLERTLTRDRVYEKRISLDCVAYGTEETTNAYFEFVLREIHNAKCGGDPETSPAIDRY
Ga0120188_101263933300013760TerrestrialMKIEFRLITAVAIAGVLISAAVAEGARSRPLDEDGALELLQRTLKRDRVYEKRISLDCVAYGTEETTATSF
Ga0120125_118316123300014056PermafrostMKIEFRLITAAVIAAILIPPIVARAGSRSHPLSEDAALDLLQRTLKRDRVYEKRISLDCIAYGTEETTNTYFEFVLREFHN
Ga0163163_1155615533300014325Switchgrass RhizosphereMKIEFRLITAAVIAVVLVSAAVAEGARSRPLDEDAALALLHRTLKRDQVYEKRISLDCISYITE
Ga0157376_1143566223300014969Miscanthus RhizosphereFRLITASIAVVLISVAIAEGARSQPLDEDAALALLERTLKQDHVYEKRISLDCIAYGTEEATNVYFEFVLREIHNAKCSGA*
Ga0132258_1233344013300015371Arabidopsis RhizosphereMKIEFRLITVAVIAAILISPIVVRGGSRSHPLSENAALNLLERTLKRDHVYDKRISWDCISYDTEETTNAY
Ga0132256_10301193213300015372Arabidopsis RhizosphereVKIELRLTTAVVVAAVLISASVVEGARSQSLNEDAALELLQRTLKRDHVYDKRISWDCISYDTEEAT
Ga0132256_10386535123300015372Arabidopsis RhizosphereMKIEFRLITAAVITVGLISAAIAEGARSRPLHEDAALAFLQRTLKRDHVYEKRISLDCIEYGTEETRNAYFEFVL
Ga0132257_10010975113300015373Arabidopsis RhizosphereVKIEFRLVTAFIAVVLISVAIAEGARSRPLDEDAALALLERTLKHDHIYEKRISLDCIAYGTE
Ga0132257_10012939343300015373Arabidopsis RhizosphereMKMDLRLITAVIAVVLASTAVAEAAHSRPLDEDAALALLQRTLKRDQVYEKRISMDCIAYGTEETTNAYF*
Ga0132257_10267047323300015373Arabidopsis RhizosphereMKIEFRLVTAAVIAAILISPIVARAGSRSHPLSEDAALDLLQRTVKRDRVYEKRISLDCIAYGTEDTTN
Ga0182035_1092348733300016341SoilMKIELRLTTAPLVTALLLSAALVENARSHPLDEDAALALLQRTLKRDRVYEKRISLDCIAYGAEETTNAYFEFVLREIHNSK
Ga0184605_1022791913300018027Groundwater SedimentMKIEFRLITASVIAAILISPIVARAGSRSHPLSEDAALDLLQRTVERDRVYEKRIALDCNAYRTEETTNAYFEFVLREIHNTKCAGDPETSPA
Ga0184620_1022603933300018051Groundwater SedimentMKMEFRLITVAVIAAILISPIVTQAGSRSHPLSEDAALDLLQRTLKRDRVYEKRIS
Ga0184621_1024321313300018054Groundwater SedimentMKFEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALDLLERTLKRDRVYEKRISLDCI
Ga0184617_118224913300018066Groundwater SedimentMKIEFRLITAAVIAAILISPIITQAGSRSHPLSEDAALDLLQRTLKRDRVYEKRISLDCIAYGTEEKTNAY
Ga0184635_1016720133300018072Groundwater SedimentMKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALDLLERTLKRDRVYEKRISLDCIAY
Ga0184624_1012587333300018073Groundwater SedimentMKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALDLLLRTLKRGRVYEKRISLDCIAYGTEETTNAYFQFVL
Ga0193756_104406233300019866SoilMKIEFRLITAAAIAAISISPIVTQAGSRSHPLSEDAALDLLQRTLKRDRVYEKRISLDCIAYGTEETTNAYFE
Ga0193703_101929013300019876SoilMKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALDLLHRTLKRDRVYEKRISLDCISYITEETTGTYFQFVLREIHNVKCGGDPEIS
Ga0193707_108602333300019881SoilMKIEFRLITAAVIATILISPIVARAGPRSHPLSEDAALDLLDRTLKRDRVYEKRISLDCIAYGTEETTKAYFE
Ga0193707_110900433300019881SoilMKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALDLLHRTLKRDRVYEKRISLGCIAYGTEETTNAYFEFVLREIHNTKCGG
Ga0193725_112560723300019883SoilMKIEFLLNTAAVIAAILILPVVARAGSRSHPLSEDTALDLLQSTLKRDRVYEKRISLDCIAYGTEETTNAYFEFVLREIHNAKCGGDLE
Ga0193718_105415133300019999SoilMKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALDLLQRTLKRDRVYEKRISLDCIAYGTE
Ga0193692_100908533300020000SoilMKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALDLLDRTLKRDRVYEKRISLDCIAYGTEETTGTYFQFVLR
Ga0193697_108466433300020005SoilMKIEFRLITAAVITAILISPVVARGGSRSHSLSEDAALDLLQRTLKRDRVYEKRISLDCIAYSTEETTNAYFEFVLREIHNAKCGGDPETSPAIDR
Ga0193734_106418413300020015SoilMKIEFRLITVALITAVLTSAAIAEGARSHPLSEDAAVDLLSRTLKHDHVYAKRISLGCITYDTEEMTDTY
Ga0193745_109801333300020059SoilMKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALDLLQRTLKRDRVYEKRISLDCISYITE
Ga0193724_104020323300020062SoilMEIEFRLITAAVIAVVLISPIVARAGSRSHPLSEDAALDLLERRLKRDRVYEKRISLDCIAYGTEETTNVYFGFVLREIHN
Ga0179592_1010017533300020199Vadose Zone SoilMKIEFRLITAAVIAAILISPIVVRAGSRSHPLSEDAALDLLERTLKRDRVYEKRISLDCIAYGT
Ga0193719_1029454833300021344SoilMKIEFRLITAAVIAAILISPIVARAGSRSKPLSEDAALDLLQRMLKRDRVYEKRISLDCIAYGTEETTNTYFEFVLREIHNAKCGGDPETSP
Ga0126371_1050181313300021560Tropical Forest SoilMKIELRRITVVSAVVLVSAAVAEASRSRPLDDDAALALPERTLKRDQVYEKRMSLNCIAYGTEETTKTYFEFVLREIHNAKCGGDPEMSPAIDRYRVY
Ga0126371_1059296023300021560Tropical Forest SoilMRTEFRLITAAVIAAALFVPVVVQADSRSHLLNEDAALDLLQRTLKHDGVYEKRISLDCVTYGTEETTKA
Ga0222622_1001179553300022756Groundwater SedimentMKMEFRLITVAVIAAILISPIVTQAGSRSHPLSEDAALDLLQRTLKRDRVYEKRISLDCIAYGTEETTNAYFEFVLREIH
Ga0222622_1004441933300022756Groundwater SedimentMKIEFRLVTAFIAVVLISVAIAEGARSRPLDENAALALLERTLKHDHVYEKRISLDCIAYGTEE
Ga0193714_101279233300023058SoilMKIEFRLVTAFIAVVLISVAIAEGARSRPLDENAALALLERTLKHDHVYEKRISLDCIAYGTEETTNAYFEFVLREIHNTKCGGDPET
Ga0207697_1036394333300025315Corn, Switchgrass And Miscanthus RhizosphereMKIEFRLITAAVIAAILISPAIAEGARSHPLSEDAAMDLLYRTLKYDRVYEKRISWDCISLGTEETTDAYFDFVLREIHNAKCG
Ga0207692_1086653033300025898Corn, Switchgrass And Miscanthus RhizosphereMKIDFRLVRAFSAVVLISVAIAEGARSRPLDEDAALALLGRTLKHDHVYEKRISLDCIAYGTEETTSAYFEFVLREVH
Ga0207685_1066653833300025905Corn, Switchgrass And Miscanthus RhizosphereMKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALELLERTLKRDRVYEKRISLDCIAYGTEETTNAYFE
Ga0207670_1015488733300025936Switchgrass RhizosphereMKIEFRLVTAAVVATILISTIIGQAGPRSHPLDEDAAVGLLVRTLKHDHVYAKRISLGLLHLR
Ga0207676_1020256823300026095Switchgrass RhizosphereMKTEFRLITAAVVATILVLTMIAQAGSRSHPLDEDAAVSLLARTLKHDQVYAKRISLGCITYDTE
Ga0209056_1012505333300026538SoilMKIEFRLITAAVIAAILISPIVVRAGSRSHPLSEDAALNLLDRTLTRDRVYEKRISLDCIAYGTEETTSAYFEFVLREIHNAKCGGDP
Ga0209161_1031054813300026548SoilMKIEFRLITAAVIAAILISPIVVRAGSRSHQLSEDAALDLLDRTLTRDRVYEKRISLDCIAYGTEETTNAYFE
Ga0209465_1020955433300027874Tropical Forest SoilMNCFFRVNAIAAAALIVISPITAPANPRSHPLNEDAALELLHRTLKRDQVYEKRISLDWISYITEEKTKAYFQFVLREIHNTKCGGVSEVS
Ga0268266_1200537333300028379Switchgrass RhizosphereMKIEFRLVTAAVVATIVISTTIAQGGSRSHPLDEDAALDLLARTLKHDHVYAKRISLGCI
Ga0307287_1024317333300028796SoilMKIEFRLITAVIAAILISPIITQAGSRSHPLSEDAALDLLQRTLKRDRVYEKRISLDCIAYGTEETTNAYFEFVL
Ga0307294_1019169713300028810SoilVKIEFRLVTAAVIAAILISPIVARAGSRSHPLSEDAALDLLLRTLKRDRVYEKRISLDCIAYGTEETTN
Ga0307286_1005322113300028876SoilMKIEFRLITAAVIAAILISPIVARAGSRSHPLSEDAALDLLLRTLKRDRVYEKRISLDCIAYGTE
Ga0170820_1004816223300031446Forest SoilMDLRLITAVIAVVLASSAVAEAAHSRPLNEDAALALLQRTLKRDHVYEKRILLDCITYGTEETTNGYFEFVLREIHNAKCGGDPETSPAIDRLPRLSPFRQNRAVGSS
Ga0170820_1353432233300031446Forest SoilMKIEFRLVTAFSAVVLISVAIAEGAPSRPLDEDAALALLGRTLKHDHVYEKRISLDCIAYGTEETTSAYFEFVLREVHNAKCGGD
Ga0310813_1157494433300031716SoilMKIEFRLITAAVIAAILISPIVTRAGSRSHPLSEDAALDLLQRTLKRDRVYEKRISLDCIAYGT
Ga0306917_1063136613300031719SoilVKIEFRLITAAVVAAVLISAAVAGGARFRSLDEDAAIAFLQRTLKRDHVYEKRISLDCIAYGTEG
Ga0310891_1012968013300031913SoilVKIEFRLITAAVVAAVLISAAITEGARPRPLDEDAALALFQRTLIHDRVYEKRISPDCISYGTEETTDAYFQFV
Ga0310911_1045196833300032035SoilVKIEFRLITAAVVAAVLISAAVAGGARFRSLDEDAAIAFLQRTLKRDHVYEKRIS
Ga0306924_1022726813300032076SoilMNSLFRLDAIAATAVILISPIAASANSRSHPLNEDAALNLLERTLKRDHVYDKRISWDCISYGTEETTNAYFEFVLREIHNAKCGGDPETSP
Ga0307471_10042156013300032180Hardwood Forest SoilMKIEFRLITAAVIAVVLVSAAVAEGARSRPLDEDAALALLERTLKRDRVYEKRISWDCIAYGTEETTNAFFEFVLREIHSTKC
Ga0310914_1066164413300033289SoilMKIELRRITAVSAAVLVSAAVVEASRSRPLDEDAALELLQRTLKRDQVYEKRISLDCVAYSTE

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.