Metagenome / Metatranscriptome Family F066055

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066055
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	60 residues
Representative Sequence	MPPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSIAALREMIEGQILKQPGMVK
Number of Associated Samples	94
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.60 %
% of genes near scaffold ends (potentially truncated)	23.62 %
% of genes from short scaffolds (< 2000 bps)	87.40 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.827 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil (19.685 % of family members)
Environment Ontology (ENVO)	Unclassified (42.520 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.142 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.44% β-sheet: 0.00% Coil/Unstructured: 45.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.13.1.0: automated matches	d7crja_	7crj	0.88224
a.25.1.1: Ferritin	d1nfva_	1nfv	0.88051
a.25.1.0: automated matches	d3b3ha_	3b3h	0.87174
a.7.2.1: Enzyme IIa from lactose specific PTS, IIa-lac	d1e2aa_	1e2a	0.86436
a.25.1.1: Ferritin	d3bvfa1	3bvf	0.86206

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF12833	HTH_18	6.30
PF12625	Arabinose_bd	6.30
PF13493	DUF4118	1.57
PF00805	Pentapeptide	0.79
PF01381	HTH_3	0.79
PF07311	Dodecin	0.79
PF03734	YkuD	0.79
PF00816	Histone_HNS	0.79
PF00528	BPD_transp_1	0.79
PF02518	HATPase_c	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.79
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.79
COG2916	DNA-binding protein H-NS	Transcription [K]	0.79
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.79
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.83 %
Unclassified	root	N/A	14.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.83 %
Unclassified	root	N/A	14.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.83 %
Unclassified	root	N/A	14.17 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.46 %
Unclassified	root	N/A	14.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	83.46 %
Unclassified	root	N/A	14.17 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	78.74 %
Unclassified	root	N/A	14.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.95 %
Unclassified	root	N/A	14.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.57 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.79 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.95 %
Unclassified	root	N/A	14.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.57 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.79 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.95 %
Unclassified	root	N/A	14.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.57 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	0.79 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.79 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	77.95 %
Unclassified	root	N/A	14.17 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.57 %
Mycolicibacterium tusciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium tusciae	0.79 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig22451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1181	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10022970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1704	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1078168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300000955\|JGI1027J12803_102868213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300000955\|JGI1027J12803_105312868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1606	Open in IMG/M
3300000956\|JGI10216J12902_101333241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1429	Open in IMG/M
3300001867\|JGI12627J18819_10132916	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1018	Open in IMG/M
3300004633\|Ga0066395_10031772	Not Available	2206	Open in IMG/M
3300004633\|Ga0066395_10420612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300005177\|Ga0066690_10723514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300005184\|Ga0066671_10054091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2046	Open in IMG/M
3300005332\|Ga0066388_100251255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2407	Open in IMG/M
3300005332\|Ga0066388_100663748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1655	Open in IMG/M
3300005332\|Ga0066388_102677795	Not Available	909	Open in IMG/M
3300005332\|Ga0066388_102782740	Not Available	893	Open in IMG/M
3300005332\|Ga0066388_102920664	Not Available	873	Open in IMG/M
3300005332\|Ga0066388_103584345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	792	Open in IMG/M
3300005332\|Ga0066388_104313481	Not Available	725	Open in IMG/M
3300005332\|Ga0066388_106407593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300005363\|Ga0008090_15877236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300005363\|Ga0008090_15897576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	648	Open in IMG/M
3300005435\|Ga0070714_100366661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1355	Open in IMG/M
3300005439\|Ga0070711_100050387	All Organisms → cellular organisms → Bacteria	2855	Open in IMG/M
3300005454\|Ga0066687_10208883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1070	Open in IMG/M
3300005457\|Ga0070662_100806786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	798	Open in IMG/M
3300005467\|Ga0070706_100381101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1313	Open in IMG/M
3300005467\|Ga0070706_101232806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	687	Open in IMG/M
3300005536\|Ga0070697_100439288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1136	Open in IMG/M
3300005536\|Ga0070697_101881157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	536	Open in IMG/M
3300005536\|Ga0070697_102039013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300005546\|Ga0070696_101018289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300005713\|Ga0066905_100135259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1748	Open in IMG/M
3300005713\|Ga0066905_100433859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1075	Open in IMG/M
3300005713\|Ga0066905_100499206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1011	Open in IMG/M
3300005713\|Ga0066905_100928151	Not Available	763	Open in IMG/M
3300005713\|Ga0066905_101468432	Not Available	620	Open in IMG/M
3300005764\|Ga0066903_100119637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3654	Open in IMG/M
3300005764\|Ga0066903_100497236	Not Available	2064	Open in IMG/M
3300005764\|Ga0066903_101734110	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1190	Open in IMG/M
3300005764\|Ga0066903_102502670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	999	Open in IMG/M
3300005764\|Ga0066903_104418651	Not Available	751	Open in IMG/M
3300005764\|Ga0066903_105242431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium tusciae	686	Open in IMG/M
3300005764\|Ga0066903_106453655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300005764\|Ga0066903_108947651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300006028\|Ga0070717_10075566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2818	Open in IMG/M
3300006173\|Ga0070716_100713302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	767	Open in IMG/M
3300006797\|Ga0066659_10979094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	707	Open in IMG/M
3300006804\|Ga0079221_11132935	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300006904\|Ga0075424_100878048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	957	Open in IMG/M
3300009089\|Ga0099828_10545274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1045	Open in IMG/M
3300009090\|Ga0099827_10184559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1727	Open in IMG/M
3300009100\|Ga0075418_11066752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	875	Open in IMG/M
3300009147\|Ga0114129_12083322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300009156\|Ga0111538_11204623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	957	Open in IMG/M
3300010043\|Ga0126380_10045709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2330	Open in IMG/M
3300010046\|Ga0126384_10064885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2573	Open in IMG/M
3300010046\|Ga0126384_10192936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1606	Open in IMG/M
3300010320\|Ga0134109_10161801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	811	Open in IMG/M
3300010358\|Ga0126370_12358473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300010361\|Ga0126378_10059589	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3604	Open in IMG/M
3300010361\|Ga0126378_11234915	Not Available	844	Open in IMG/M
3300010362\|Ga0126377_10135571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2294	Open in IMG/M
3300010362\|Ga0126377_11345430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	786	Open in IMG/M
3300010366\|Ga0126379_10114011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2438	Open in IMG/M
3300010376\|Ga0126381_104913627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	513	Open in IMG/M
3300010396\|Ga0134126_12320547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300010403\|Ga0134123_12189097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	615	Open in IMG/M
3300010863\|Ga0124850_1038318	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300012202\|Ga0137363_10193786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1626	Open in IMG/M
3300012205\|Ga0137362_10425717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1149	Open in IMG/M
3300012211\|Ga0137377_10888301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300012356\|Ga0137371_11135330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300012582\|Ga0137358_10376850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	960	Open in IMG/M
3300012925\|Ga0137419_11711158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300012948\|Ga0126375_10052305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2184	Open in IMG/M
3300012955\|Ga0164298_10519731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300012957\|Ga0164303_10289337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	960	Open in IMG/M
3300012960\|Ga0164301_10734517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	747	Open in IMG/M
3300012961\|Ga0164302_11136722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300012984\|Ga0164309_11393726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	597	Open in IMG/M
3300012987\|Ga0164307_10438152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	972	Open in IMG/M
3300012989\|Ga0164305_11165507	Not Available	666	Open in IMG/M
3300013297\|Ga0157378_10411030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1336	Open in IMG/M
3300013306\|Ga0163162_10839076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1035	Open in IMG/M
3300015374\|Ga0132255_103333168	Not Available	684	Open in IMG/M
3300016270\|Ga0182036_11423563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300016319\|Ga0182033_11620435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300016341\|Ga0182035_10917700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	773	Open in IMG/M
3300016371\|Ga0182034_11931371	Not Available	521	Open in IMG/M
3300018482\|Ga0066669_11083130	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	723	Open in IMG/M
3300020579\|Ga0210407_11438048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300021168\|Ga0210406_10562640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	894	Open in IMG/M
3300021168\|Ga0210406_10591684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	867	Open in IMG/M
3300021168\|Ga0210406_10723045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	765	Open in IMG/M
3300021403\|Ga0210397_10875684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	695	Open in IMG/M
3300021475\|Ga0210392_10239360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1282	Open in IMG/M
3300021478\|Ga0210402_11614082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300021560\|Ga0126371_10226144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1977	Open in IMG/M
3300021560\|Ga0126371_10547244	Not Available	1306	Open in IMG/M
3300021560\|Ga0126371_11153182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	913	Open in IMG/M
3300021560\|Ga0126371_13495217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300025910\|Ga0207684_10056029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3344	Open in IMG/M
3300025916\|Ga0207663_11652871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300025922\|Ga0207646_11425918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300025933\|Ga0207706_10179040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1862	Open in IMG/M
3300026300\|Ga0209027_1147178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	805	Open in IMG/M
3300026306\|Ga0209468_1181059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300026551\|Ga0209648_10158142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1780	Open in IMG/M
3300027105\|Ga0207944_1006571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1036	Open in IMG/M
3300027875\|Ga0209283_10890564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300028536\|Ga0137415_11322089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300029636\|Ga0222749_10718973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300031543\|Ga0318516_10075915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1870	Open in IMG/M
3300031681\|Ga0318572_10314699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	926	Open in IMG/M
3300031740\|Ga0307468_100173794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1420	Open in IMG/M
3300031748\|Ga0318492_10648883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300031763\|Ga0318537_10092922	Not Available	1115	Open in IMG/M
3300031835\|Ga0318517_10372008	Not Available	646	Open in IMG/M
3300031893\|Ga0318536_10321284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	785	Open in IMG/M
3300031910\|Ga0306923_11428881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	727	Open in IMG/M
3300031912\|Ga0306921_10975997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	957	Open in IMG/M
3300032054\|Ga0318570_10340771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	682	Open in IMG/M
3300032174\|Ga0307470_11004576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300032261\|Ga0306920_102386806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	730	Open in IMG/M
3300033289\|Ga0310914_11057702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.13%
Host-Associated	Host-Associated	7.09%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.13%
Plants	Host-Associated → Plants	7.09%
Modeled	Engineered → Modeled	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.51%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.57%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.63%
Loam	Environmental → Terrestrial → Soil → Loam	31.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.79%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.24%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.66%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.94%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.57%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.79%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	19.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.45%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.51%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.15%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.36%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.57%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027105	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF018 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0451.00002260	2166559005	Simulated	MIWQAIIQKGVMNVPPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSLAALREMIEGQILKQPGMVK
AF_2010_repII_A1DRAFT_100229702	3300000597	Forest Soil	MPPTPEARTADRAIACLRKAMEELAAGRPRDALAMVANAQDRASELRGMIERLIPL*
AF_2010_repII_A100DRAFT_10781681	3300000655	Forest Soil	MPPTPEARTADRAIGCLRKAIEELAAGRPRNALAMVANAQDSALELRAMIERLLPL*
JGI1027J12803_1028682132	3300000955	Soil	VPPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSVATLREMIEGQILKQPGMAN*
JGI1027J12803_1053128684	3300000955	Soil	MSPTFEARTADRAIASLRKAIEELAAERPREARAMVVNAAGSLAALREMIEGQILKQPGMVK*
JGI10216J12902_1013332413	3300000956	Soil	MPPTLEARTADRAIACLRKAIEELAAGRARDALNMVANAQDSASALRGMIEGQISSDE*
JGI12627J18819_101329163	3300001867	Forest Soil	MNMPPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSIAALREMIEGQILKQPGMVK*
Ga0066395_100317724	3300004633	Tropical Forest Soil	MPPTIEAQTADRAIASLRKAIEELAAGRPQSALVMVSNAQGRASALRGMIEQQIPRS*
Ga0066395_104206123	3300004633	Tropical Forest Soil	MLPTLEARTADRTIACLRKAIEELAAGRPRDALAMVANAQDSASELRGMIERLISL*
Ga0066690_107235141	3300005177	Soil	MPPTLEARTADRAIACLRRAIEELAAERPREARAMVANAAGSLAALREMIEGQILKQPGMVK*
Ga0066671_100540913	3300005184	Soil	MPPTLEARTADRAIASLRKAIEELAAERPRDARAMVVNASGSVAALREMIEGQILKQPGIMK*
Ga0066388_1002512551	3300005332	Tropical Forest Soil	MQPTPEAHTADRAIACLRKAIEELAAGRPREAHAMVANAAGSVAALREMVDRQILKQSEMVQ*
Ga0066388_1006637482	3300005332	Tropical Forest Soil	MSPTLEARTADRAIACLRKAIEELAAGRLREADAMVANAADSVAALREMVDRQILKQSGLVQ*
Ga0066388_1026777952	3300005332	Tropical Forest Soil	MLPTLEARTADRAIASLRKAIEQLAAGRPRDALAMVTNAQDSTSELRGMIERLIPL*
Ga0066388_1027827401	3300005332	Tropical Forest Soil	ADRTIACLRKAIEQLAAGRPRDALAMVANAQDSASELRGMIERQIPL*
Ga0066388_1029206643	3300005332	Tropical Forest Soil	MQPTLEAHTADRAIACLRKAIEELAAGRPREAHAMVVNAAGSVAALREMVDRQIFKQSGMVQAN*
Ga0066388_1035843452	3300005332	Tropical Forest Soil	MNVPPTLEASTADRAIACLRKAIVELAAERPREARAMVVNAAGSVAALREMIEAQILKQPEMVK*
Ga0066388_1039585351	3300005332	Tropical Forest Soil	ADRAIASLRKAIEELAAGRPQSALVMVSNAQGRASALRGMIEQQIPRS*
Ga0066388_1043134811	3300005332	Tropical Forest Soil	MLPTIEAQTADRAIASLRKAIDELAAGRPHKALVMVASAQGGASALRGMIEQQMPR
Ga0066388_1064075932	3300005332	Tropical Forest Soil	VPPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSVAALREMIEGQILKPPGMVK*
Ga0008090_158772362	3300005363	Tropical Rainforest Soil	MQPTLEAHTADRAIACLRKAIEELAAGRPREAHAMVANAAGSVAALREMVDRQTLKQSGMVQ*
Ga0008090_158975762	3300005363	Tropical Rainforest Soil	MQPTLEARTADRAIASLRKAIEDLAAGRPREAHAMVANAAGSVASLREMVDRQISSSP*WCRQITA
Ga0070714_1003666613	3300005435	Agricultural Soil	MNVPPTLEASTADRAIACLRKAIEELAAERPREARAMVVNAAGGLAALREMIEGQILKQPGMVK*
Ga0070711_1000503872	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNVPPTLEARTADRAIASLRKAIEELAAERPREARAMVVNAAGGVAALREMIEGQILKQSGMVK*
Ga0066687_102088832	3300005454	Soil	MPPTLEARTADRAIASLRKAIEELAAERPRDARAMVVNASGSVAALREMIEGQILKQPEIMK*
Ga0070662_1008067861	3300005457	Corn Rhizosphere	MPPTLEARTADRAIACLRRAIEELAAERPREARAMVANAAGSLAALREMIEGQILKQPG
Ga0070706_1003811013	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPPTLEARTADRAVAYLRKAIEELAAGRPRDAIAMVANAQDSASALRDMIEGQISQS*
Ga0070706_1012328062	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPPTAEARTADRAIACLRKAIEELAAERPREARAMVVSAAGSVAALREMIEGQILKQPGMAK*
Ga0070697_1004392883	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPPTAEARTADRAIACLRKAIEELAAERPRDARAMVVDAAGSVAALRERIEGQILKQPGMVK*
Ga0070697_1018811572	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	PTLEARTADRAIACLRRAIEELAAERPREARAMVANAAGSLAALREMIEGQILKQPGMVK
Ga0070697_1020390132	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPPTLEARTADRAIACLRRAIEELAAERPREARAMVVNAAGSVAALREMIEGQILKQPGMAK*
Ga0070696_1010182892	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPPTLEARTADRTIACLRKAIEELAAERPREARAMVVNAAGSLAALREMIEGQILKQPGMVK*
Ga0066905_1001352591	3300005713	Tropical Forest Soil	MPPTIEAQTADRAIASLRKAIEELAAGRPQSALVMVSNAQGRASALRG
Ga0066905_1004338592	3300005713	Tropical Forest Soil	MPPTPEARTADRAIACLRKAMEELAAGRPRDALVMVANAQDRASELRGMIERLMPL*
Ga0066905_1004992062	3300005713	Tropical Forest Soil	MQPTLEARTADRAIASLRKAIEELAAGRPREAHAMVANAAGSVASLREMVDRQISSSP*
Ga0066905_1009281512	3300005713	Tropical Forest Soil	MNVLPTLEARTADRAIACLRKAIEELAAGRPRDALAMVATAQDSASALRGMIERVIPL*
Ga0066905_1014684322	3300005713	Tropical Forest Soil	PTIEAQTADRAIASLRKAIEELAAGRPHSALVMVASAQGGASALRGMIEQQMPRP*
Ga0066903_1001196374	3300005764	Tropical Forest Soil	VPPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSVAALREMIEGQILKQPGMVK*
Ga0066903_1004972363	3300005764	Tropical Forest Soil	MNVPPTLEASIADRAIACLRKAIEELAAERPREARAMVVNAAGSVAALREMIEAQILKQPEMVK*
Ga0066903_1017341103	3300005764	Tropical Forest Soil	MPPTLEARTADRAIATLRKAIEELAAERPREARAMVVNAAGSVAALREMIEAQLLKQQGSEG*
Ga0066903_1025026702	3300005764	Tropical Forest Soil	MPPTPEARTADRAIACLRKAMEELAAGRPRDALAMVANAQDRASELRGMIERLLPL*
Ga0066903_1044186512	3300005764	Tropical Forest Soil	MLPTMEAQTADRAIASLRKAIEELAAGRPQSALVMVANAQGRASALRGMIEQQIPRS*
Ga0066903_1052424311	3300005764	Tropical Forest Soil	MPPTLEARTADRAIATLRKAIEELAAERPREARAMVVNAAGSVAALREMIEAQILKQPEMVK*
Ga0066903_1064536553	3300005764	Tropical Forest Soil	MPPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSIAALREMIEGQILKQPEMVK*
Ga0066903_1089476512	3300005764	Tropical Forest Soil	MPPTLEARTADRTIACLRKAIEELAAGRPRDALAMVANAQDSASQLRGMIERLILL*
Ga0070717_100755666	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPPTAEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSVAALREMIEGQILKQPGMAK*
Ga0070716_1007133022	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MNVPPTLEARTADRAIASLRKAIEELAAERPREARAMVVNAAGGLAALREMIEGQILKQPGMVK*
Ga0066659_109790942	3300006797	Soil	MPPTLEARTADRAIASLRKAIEELAAERPRDARAMVVNASGSVAALPEMIEGQILKQPEIMK*
Ga0079221_111329351	3300006804	Agricultural Soil	MPPTLEARTADRAIASLRKAIEELAAERPREARGMVINAAGSVAALREMIGRPDLNQPEMVK*
Ga0075424_1008780482	3300006904	Populus Rhizosphere	MNVPPTLEARTADRAIASLRKAIEELAAERPREARAMVVNAAGSLAALREMIEGQILKQPGMVK*
Ga0099828_105452743	3300009089	Vadose Zone Soil	MPPTLEARTADRAVAYLRKAIEELAAGRPRDAIAMVANAQDSASALRGMIEGQISQS*
Ga0099827_101845594	3300009090	Vadose Zone Soil	MPPTLEARTADRAVAYLRKAIEELAAGRPRDAIAMVANAQDSASALRGMI
Ga0075418_110667523	3300009100	Populus Rhizosphere	MPPTLEARTADRAIACLRKAIEELAAERPRDARAMVVDAAGSVAALREMIEGQILKQPGMVR*
Ga0114129_120833223	3300009147	Populus Rhizosphere	VPPTLEASTADRAIACLRKAIEELAAERPREARAMVVNAAGGLAALREMIEGQILKQPGMVK*
Ga0111538_112046232	3300009156	Populus Rhizosphere	MPPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGGLAALREMIEGQILKQPGMVK*
Ga0126380_100457093	3300010043	Tropical Forest Soil	MPPTPEARTADRAIACLRKAMEELAAGRPRDALVMVANAQDRVSELRGMIERLMPL*
Ga0126384_100648852	3300010046	Tropical Forest Soil	MLPTLEARTADRAIASLRKAIEQLAAGRPRDALAMVTNAQDSASELRGMIECLIPL*
Ga0126384_101929362	3300010046	Tropical Forest Soil	MQPTLEARTADRAIASLRKTIEELAAGRPREAHAMVANAAGSVASLREMVDRQISSSP*
Ga0134109_101618012	3300010320	Grasslands Soil	MPPTLEARTADRAIASLRKAIEELAAERPRDARAMVVNASGSVAALREMIEGQILKQPGIMKCK*
Ga0126370_123584731	3300010358	Tropical Forest Soil	MNVPPTIEASTADRAIACLRKAIEELAAERPREARAMVVNAAGSVAALREMIEAQILKQPVMVL*
Ga0126372_106913712	3300010360	Tropical Forest Soil	ASLRKAIEELAAGRPQSALVMVSNAQGRASALRGMIEQQIPRS*
Ga0126378_100595895	3300010361	Tropical Forest Soil	MPPTPEARTADRAIACLRKAMEELAAGRPRDALVMVANAQDRASELRGMIERLLPL*
Ga0126378_112349153	3300010361	Tropical Forest Soil	TADRAIASLRKAIEELAAGRPQSALVMVSNAQGRASALRGMIEQQIRRS*
Ga0126377_101355713	3300010362	Tropical Forest Soil	MPPTPEARTADRAIACLRKAMEELAAGRPRDALAMVANAQDRASELRGMIERLMPL*
Ga0126377_113454302	3300010362	Tropical Forest Soil	MPPTLEARTADRAIALRKAIEELAAGRPREAHAMVANAAGSVAALREMVDRQILKQSGMVQ*
Ga0126379_101140111	3300010366	Tropical Forest Soil	VSCTDWRATIKNGVKPMQPTLEARTADRAIASLRKAIEELAAGRPREAHAMVANAAGSVASLREMVDRQISSSP*
Ga0126381_1049136271	3300010376	Tropical Forest Soil	MNVPQTLEASTADRAIACLRKAIEELAAERPREARAMVVNAAGSVAALREMIEAQILKQPEMVK*
Ga0134126_123205472	3300010396	Terrestrial Soil	MPPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGGVAALREMIEGQILKQPGMVR*
Ga0134123_121890971	3300010403	Terrestrial Soil	MPPTLEARTADRAIASLRKAIEELAAERPRDARAMVANASGSVAALREMIEGQILKQPGIMK*
Ga0124850_10383184	3300010863	Tropical Forest Soil	EQLNMLPTLEARTADRTIACLRKAIEELAAGRPRDALAMVANAQDSASELRGMIERLISL
Ga0137363_101937863	3300012202	Vadose Zone Soil	MPPTLEARTADRTIACLRKAIEELAAGRPRDAIAMVANAQDSASALRGMIEGQISQS*
Ga0137362_104257172	3300012205	Vadose Zone Soil	VLPTLEARAADRAIACLRKAIEELTAERPREARAMVVNAAGSVAALREMIEGQILKQPGMAK*
Ga0137377_108883012	3300012211	Vadose Zone Soil	MPPTLEARTADRAIACLRKAIEELAAERPREARAMVVSAAGSVAALREMIEGQILKQPGMVK*
Ga0137371_111353302	3300012356	Vadose Zone Soil	MPPTLEARTADRAIACLRKAIEEQAAARPRNALAMVANAQDRASTLRGM
Ga0137358_103768501	3300012582	Vadose Zone Soil	MPPTLEARTADRAIACLRKAIEELAAERLLEARTMVVNAAGSLAALREMIEGQILKQLGMVK*
Ga0137419_117111583	3300012925	Vadose Zone Soil	MNVPPTLEASTADRAIACLRKAIEELAAERPHEARAMVVNAAGGLAALREMIEGQISQAARNGEV
Ga0126375_100523053	3300012948	Tropical Forest Soil	MPPTIEAQTADRAMGSLRKAIEELAAGRPQSALVMVSNAQGRASALRGMIEQQIPRS*
Ga0164298_105197311	3300012955	Soil	PTAEARTADRAIACLRKAVEELAAERPREARAMVVNAAGGLAGLRAMIEGQILKQPGMVK
Ga0164303_102893373	3300012957	Soil	MNVPPTLEARTANRAIASLRKAIEELAAERPREARAMVVNAAGGVAALREMIEGQILKQPGMAK*
Ga0164301_107345172	3300012960	Soil	MLPTLEARTADRTIACLRKAIEELAAGRPRDALAMIANAQDSASELRGMIERLFRCNHPREIPKL*
Ga0164302_111367221	3300012961	Soil	MPPTLEARTADRAIACLRKAIEELAAARPREARATVVNAAGSVAALREMIEGQILKQPGMEK*
Ga0164309_113937261	3300012984	Soil	MLPTLEARTADRTIACLRKAIEELAAGRPRDALAMVANAQDSASELRGMIERLILL*
Ga0164307_104381521	3300012987	Soil	ARTADRAIACLRRAIEELAAERPREARAMVANAAGSLAALREMIEGQILKQPGMVK*
Ga0164305_111655072	3300012989	Soil	MLPTLEARTADRTIACLRKAIEELAAGRPRDALAMIANAQDSASELRGMIERLISL*
Ga0157378_104110303	3300013297	Miscanthus Rhizosphere	MPPTLEARTADRAIASLRKAIEELAAERPREARAMVVNAAGGLAALREMIEGQILKQPGMVK*
Ga0163162_108390761	3300013306	Switchgrass Rhizosphere	MNVPPTLEASTADRAIACLRKAIEELAAERPREARAMVVNAAGSLAALREMIEGQILKQPGMVK*
Ga0132255_1033331681	3300015374	Arabidopsis Rhizosphere	NMPPTVEARTADRAIACLRKAIEELAAGRPRAAMAMVADAEGSVLALRSNDRGADFS*
Ga0182036_114235632	3300016270	Soil	MLPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSVAALHEMIEGQILKQPGMVK
Ga0182033_116204352	3300016319	Soil	MLPTLEARTADRAIASLRKAIEELAAERPREARAMVVNAAGSVAALREMIEGQILKQPGMVK
Ga0182035_109177002	3300016341	Soil	MLPTLEARTADRAIASLRKAIEELAAERPREARAMVANAAGSVAALREMIEGQILKQPGMVK
Ga0182034_119313711	3300016371	Soil	MQPTPEAHTADRAIACLRKAIEELAAGRPRDALAMVATAQDSASALRGMIEHLIPL
Ga0066669_110831302	3300018482	Grasslands Soil	MPPTLEARTADRAIASLRKAIEELAAERPRDARAMVVNASGSVAALREMIEGQILKQPGIMK
Ga0210407_114380481	3300020579	Soil	MPPTLEARTADRAIACLRRAIEELAAERPREARAMVVNAAGSLAALREMIEGQILKQPGMVK
Ga0210406_105626403	3300021168	Soil	RIQNGVMNVPPTLEARTADRAIASLRKAIEELAAERPREARAMVVNAAGSLAALREMIEGQILKQPGMVK
Ga0210406_105916843	3300021168	Soil	PTLEARTADRAIASLRKAIEELAAERPREARAMVVNAAGGVAALREMIEGQILKQPGMAK
Ga0210406_107230451	3300021168	Soil	MLPTLEARTADRTIACLRKAIEELAAGRPRDALAMIANAQDSASELRGMIERLISL
Ga0210397_108756842	3300021403	Soil	MPPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSIAALREMIEGQILKQPGMVK
Ga0210392_102393601	3300021475	Soil	RTADRAIACLRRAIEELAAERPREARAMVVNAAGSLAALREMIEGQILKQPGMVK
Ga0210402_116140821	3300021478	Soil	MPPTLEALTADRAIACLRRAIEELAAGRPRDALTMVANAQDSASVLRGMIEAQISNDE
Ga0126371_102261442	3300021560	Tropical Forest Soil	MLPTLEARTADRTIACLRKAIEELAAGRPRDALAMVANAQDSASELRGMIERLISL
Ga0126371_105472443	3300021560	Tropical Forest Soil	MPPTIEAQTADRAIASLRKAIEELAAGRPQSALVMVSNAQGRASALRGMIEQQIPRS
Ga0126371_111531822	3300021560	Tropical Forest Soil	MQPTLEARTADRAIASLRKAIEELAAGRPREAHAMVANAAGSVASLREMVDRQISSSP
Ga0126371_134952172	3300021560	Tropical Forest Soil	MPPTLEARTADRAIATLRKAIEELAAERPREARAMVVNAAGSVAALREMIEAQLLKQQGSEG
Ga0207684_100560294	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPPTLEARTADRAVAYLRKAIEELAAGRPRDAIAMVANAQDSASALRDMIEGQISQS
Ga0207663_116528712	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MNVPPTLEARTADRAIASLRKAIEELAAERPREARAMVVNAAGGVAALREMIEGQILKQSGMVK
Ga0207646_114259182	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPPTAEARTADRAIACLRKAIEERAAERPREARAMVVNAAGSVAALREMIEGQILKQPGMVK
Ga0207706_101790404	3300025933	Corn Rhizosphere	MPPTLEARTADRAIACLRRAIEELAAERPREARAMVANAAGSLAALREMIEGQILKQPGMAK
Ga0209027_11471781	3300026300	Grasslands Soil	MPPTLEARTADRAIASLRKAIEELAAERPRDARAMVVNASGSVAALREMIEGQILK
Ga0209468_11810592	3300026306	Soil	MPPTLEARTADRAIASLRKAIEELAAERPRDARAMVVNASGSVAALREMIEGQILKQPEIMK
Ga0209648_101581422	3300026551	Grasslands Soil	MLPTLEARTADRTIACLRKAIEELAAGRPRDALAMVANAQDSASELRGMIERLILL
Ga0207944_10065711	3300027105	Forest Soil	MPPTLEALTADRAIACLRRAIEELAAGRPRDALTMVANAQDSASVLRGMIE
Ga0209283_108905642	3300027875	Vadose Zone Soil	MPPTLEARTADRAVAYLRKAIEELAAGRPRDAIAMVANAQDSASALRGMIEGQISQS
Ga0137415_113220892	3300028536	Vadose Zone Soil	MPPTLEARTADRAIACLRKAIEELAAERPHEARAMVVNAAGGLAALREM
Ga0222749_107189732	3300029636	Soil	MPPTLEASTADRAIACLRKAIEELAAERPREARAMVVNAAGSLAALREMIEGQILKQPGMVK
Ga0318516_100759153	3300031543	Soil	MNVLPTLEARTADRAIACLRKAIEELAAGRPRDALAMVATAQDSASALRGMIEHLIPL
Ga0318572_103146992	3300031681	Soil	LGHHRTADRAIACLRKAIEELAAGRPRDALAMVATAQDSASALRGMIEHLIPL
Ga0307468_1001737942	3300031740	Hardwood Forest Soil	VPPTLEARTADRAIASLRKAIEELAAERPREARAMVVNAAGSLAALREMIEGQILKQPGMVK
Ga0318492_106488833	3300031748	Soil	MNVLPTLEARTADRAIACLRKAIEELAAGRPRDALAMVATAQDSASALRGMIERLVPL
Ga0318537_100929224	3300031763	Soil	NVLPTLEARTADRAIACLRKAIEELAAGRPRDALAMVATAQDSASALRGMIEHLIPL
Ga0318517_103720082	3300031835	Soil	LEARTADRAIACLRKAIEELAAGRPRDALAMVATAQDSASALRGMIEHLIPL
Ga0318536_103212841	3300031893	Soil	MLPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSVAALREMIEGQILKQPGMVK
Ga0306923_114288813	3300031910	Soil	MLPTLEARTADRAIASLRKAIEELAAERPREARAMVVNAAGSVAALHEMIEGQILKQPGMVK
Ga0306921_109759974	3300031912	Soil	PTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSVAALHEMIEGQILKQPGMVK
Ga0318570_103407712	3300032054	Soil	MPPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSVAALHEMIEGQILKQPGMVK
Ga0307470_110045761	3300032174	Hardwood Forest Soil	MNVPPTLEARTADRAIASLRKAIEELAAERPREARAMVVNAAGSLAALREMIEGQILKQPGMVK
Ga0306920_1023868061	3300032261	Soil	MQPTPEAHTADRAIACLRKAIEELAAGRPREAHAMVAHAAGSVAALREMVDRQILKQS
Ga0310914_110577021	3300033289	Soil	MLPTLEARTADRAIACLRKAIEELAAERPREARAMVVNAAGSVAALREMIEGQLLKQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066055

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences