NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F066090

Metagenome / Metatranscriptome Family F066090

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F066090
Family Type Metagenome / Metatranscriptome
Number of Sequences 127
Average Sequence Length 63 residues
Representative Sequence VTKPAARPRRWWKYLLIAAGVGVAAMLAALWYTTTDSFQAYVRRRMVSEVERITGGRA
Number of Associated Samples 114
Number of Associated Scaffolds 127

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 99.17 %
% of genes near scaffold ends (potentially truncated) 92.91 %
% of genes from short scaffolds (< 2000 bps) 89.76 %
Associated GOLD sequencing projects 110
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (94.488 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(11.811 % of family members)
Environment Ontology (ENVO) Unclassified
(21.260 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.157 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 127 Family Scaffolds
PF13624SurA_N_3 33.86
PF01103Omp85 8.66
PF07244POTRA 2.36
PF05237Obsolete Pfam Family 0.79


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.49 %
UnclassifiedrootN/A5.51 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000156|NODE_c0723607All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis6348Open in IMG/M
3300001867|JGI12627J18819_10193642All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae822Open in IMG/M
3300003505|JGIcombinedJ51221_10264947All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae699Open in IMG/M
3300004082|Ga0062384_100464665All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae830Open in IMG/M
3300004475|Ga0068969_1304790All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae543Open in IMG/M
3300004631|Ga0058899_11414384All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1355Open in IMG/M
3300005434|Ga0070709_10060703All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2404Open in IMG/M
3300005436|Ga0070713_102046888All Organisms → cellular organisms → Bacteria → Acidobacteria555Open in IMG/M
3300005537|Ga0070730_10926235All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300005555|Ga0066692_10312694All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae996Open in IMG/M
3300005555|Ga0066692_10953192All Organisms → cellular organisms → Bacteria → Acidobacteria525Open in IMG/M
3300005895|Ga0075277_1067029All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300006028|Ga0070717_11669830All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300006052|Ga0075029_100818425All Organisms → cellular organisms → Bacteria → Acidobacteria635Open in IMG/M
3300006102|Ga0075015_101010883All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae509Open in IMG/M
3300006102|Ga0075015_101053089All Organisms → cellular organisms → Bacteria → Acidobacteria500Open in IMG/M
3300006172|Ga0075018_10803547All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300006175|Ga0070712_100190785All Organisms → cellular organisms → Bacteria1604Open in IMG/M
3300006176|Ga0070765_101044100All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae772Open in IMG/M
3300007982|Ga0102924_1138523All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1145Open in IMG/M
3300009089|Ga0099828_10833626All Organisms → cellular organisms → Bacteria → Acidobacteria825Open in IMG/M
3300009623|Ga0116133_1095962All Organisms → cellular organisms → Bacteria → Acidobacteria752Open in IMG/M
3300009698|Ga0116216_10783133All Organisms → cellular organisms → Bacteria → Acidobacteria572Open in IMG/M
3300010361|Ga0126378_11446657All Organisms → cellular organisms → Bacteria → Acidobacteria779Open in IMG/M
3300010373|Ga0134128_12149101All Organisms → cellular organisms → Bacteria → Acidobacteria615Open in IMG/M
3300010866|Ga0126344_1270290All Organisms → cellular organisms → Bacteria → Acidobacteria924Open in IMG/M
3300010937|Ga0137776_1018896All Organisms → cellular organisms → Bacteria → Acidobacteria1653Open in IMG/M
3300011120|Ga0150983_14622525All Organisms → cellular organisms → Bacteria → Acidobacteria703Open in IMG/M
3300012207|Ga0137381_11135626All Organisms → cellular organisms → Bacteria → Acidobacteria672Open in IMG/M
3300012357|Ga0137384_10452169All Organisms → cellular organisms → Bacteria → Acidobacteria1057Open in IMG/M
3300012917|Ga0137395_10371548All Organisms → cellular organisms → Bacteria → Acidobacteria1021Open in IMG/M
3300012960|Ga0164301_11570465All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300012971|Ga0126369_11016945All Organisms → cellular organisms → Bacteria → Acidobacteria917Open in IMG/M
3300014160|Ga0181517_10324442All Organisms → cellular organisms → Bacteria → Acidobacteria804Open in IMG/M
3300014164|Ga0181532_10539342All Organisms → cellular organisms → Bacteria → Acidobacteria637Open in IMG/M
3300015262|Ga0182007_10202733All Organisms → cellular organisms → Bacteria → Acidobacteria694Open in IMG/M
3300015371|Ga0132258_10130533All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis5991Open in IMG/M
3300016294|Ga0182041_12029425All Organisms → cellular organisms → Bacteria → Acidobacteria536Open in IMG/M
3300016341|Ga0182035_10136446All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1861Open in IMG/M
3300016750|Ga0181505_10677525All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1616Open in IMG/M
3300017822|Ga0187802_10259059All Organisms → cellular organisms → Bacteria → Acidobacteria674Open in IMG/M
3300017943|Ga0187819_10039550All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2790Open in IMG/M
3300017955|Ga0187817_10804053All Organisms → cellular organisms → Bacteria → Acidobacteria600Open in IMG/M
3300017961|Ga0187778_11061587All Organisms → cellular organisms → Bacteria → Acidobacteria563Open in IMG/M
3300017961|Ga0187778_11252921All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300018006|Ga0187804_10294813All Organisms → cellular organisms → Bacteria → Acidobacteria706Open in IMG/M
3300018006|Ga0187804_10467587All Organisms → cellular organisms → Bacteria → Acidobacteria564Open in IMG/M
3300018037|Ga0187883_10148955All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1205Open in IMG/M
3300018043|Ga0187887_10263109All Organisms → cellular organisms → Bacteria → Acidobacteria1020Open in IMG/M
3300018060|Ga0187765_11211419All Organisms → cellular organisms → Bacteria → Acidobacteria530Open in IMG/M
3300018085|Ga0187772_10076946All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2107Open in IMG/M
3300018090|Ga0187770_11318035All Organisms → cellular organisms → Bacteria → Acidobacteria585Open in IMG/M
3300018431|Ga0066655_10144223All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1404Open in IMG/M
3300018468|Ga0066662_10823849All Organisms → cellular organisms → Bacteria → Acidobacteria903Open in IMG/M
3300020582|Ga0210395_11260841All Organisms → cellular organisms → Bacteria → Acidobacteria542Open in IMG/M
3300021046|Ga0215015_10086111All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2635Open in IMG/M
3300021170|Ga0210400_10895390All Organisms → cellular organisms → Bacteria → Acidobacteria725Open in IMG/M
3300021180|Ga0210396_10563930All Organisms → cellular organisms → Bacteria → Acidobacteria992Open in IMG/M
3300021181|Ga0210388_10706065All Organisms → cellular organisms → Bacteria → Acidobacteria878Open in IMG/M
3300021401|Ga0210393_10710716All Organisms → cellular organisms → Bacteria → Acidobacteria819Open in IMG/M
3300021433|Ga0210391_10821704All Organisms → cellular organisms → Bacteria → Acidobacteria726Open in IMG/M
3300021474|Ga0210390_10255935All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1483Open in IMG/M
3300021476|Ga0187846_10291337All Organisms → cellular organisms → Bacteria → Acidobacteria676Open in IMG/M
3300021478|Ga0210402_10958586All Organisms → cellular organisms → Bacteria → Acidobacteria782Open in IMG/M
3300021559|Ga0210409_10721976All Organisms → cellular organisms → Bacteria → Acidobacteria868Open in IMG/M
3300021861|Ga0213853_10239320All Organisms → cellular organisms → Bacteria → Acidobacteria827Open in IMG/M
3300022528|Ga0242669_1015175All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella1052Open in IMG/M
3300022531|Ga0242660_1099360All Organisms → cellular organisms → Bacteria → Acidobacteria710Open in IMG/M
3300022557|Ga0212123_10777188All Organisms → cellular organisms → Bacteria → Acidobacteria579Open in IMG/M
3300022717|Ga0242661_1162163All Organisms → cellular organisms → Bacteria → Acidobacteria508Open in IMG/M
3300025898|Ga0207692_10791351All Organisms → cellular organisms → Bacteria → Acidobacteria620Open in IMG/M
3300025905|Ga0207685_10751063All Organisms → cellular organisms → Bacteria → Acidobacteria534Open in IMG/M
3300025914|Ga0207671_10949911All Organisms → cellular organisms → Bacteria → Acidobacteria678Open in IMG/M
3300025928|Ga0207700_10771738All Organisms → cellular organisms → Bacteria → Acidobacteria859Open in IMG/M
3300025928|Ga0207700_11708559All Organisms → cellular organisms → Bacteria → Acidobacteria555Open in IMG/M
3300027030|Ga0208240_1002261All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1914Open in IMG/M
3300027045|Ga0207726_1045850All Organisms → cellular organisms → Bacteria → Acidobacteria592Open in IMG/M
3300027330|Ga0207777_1004679All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3232Open in IMG/M
3300027537|Ga0209419_1095639All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300027625|Ga0208044_1091186All Organisms → cellular organisms → Bacteria → Acidobacteria899Open in IMG/M
3300027821|Ga0209811_10025693All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1946Open in IMG/M
3300027842|Ga0209580_10113738All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1317Open in IMG/M
3300027854|Ga0209517_10544577All Organisms → cellular organisms → Bacteria → Acidobacteria625Open in IMG/M
3300027884|Ga0209275_10064006All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1804Open in IMG/M
3300028906|Ga0308309_10349432All Organisms → cellular organisms → Bacteria → Acidobacteria1260Open in IMG/M
3300030007|Ga0311338_10965489All Organisms → cellular organisms → Bacteria → Acidobacteria831Open in IMG/M
3300030058|Ga0302179_10212833All Organisms → cellular organisms → Bacteria → Acidobacteria853Open in IMG/M
3300030503|Ga0311370_10941352All Organisms → cellular organisms → Bacteria → Acidobacteria972Open in IMG/M
3300030503|Ga0311370_11266217All Organisms → cellular organisms → Bacteria → Acidobacteria792Open in IMG/M
3300030730|Ga0307482_1240632All Organisms → cellular organisms → Bacteria → Acidobacteria565Open in IMG/M
3300030743|Ga0265461_13965906All Organisms → cellular organisms → Bacteria → Acidobacteria504Open in IMG/M
3300030815|Ga0265746_1010892All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1013Open in IMG/M
3300030847|Ga0075405_11698943All Organisms → cellular organisms → Bacteria → Acidobacteria562Open in IMG/M
3300030991|Ga0073994_11190695All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300031027|Ga0302308_10299109All Organisms → cellular organisms → Bacteria → Acidobacteria994Open in IMG/M
3300031090|Ga0265760_10020932All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1889Open in IMG/M
3300031128|Ga0170823_16499487All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300031231|Ga0170824_121528221All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M
3300031231|Ga0170824_124453215All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1248Open in IMG/M
3300031239|Ga0265328_10104409All Organisms → cellular organisms → Bacteria → Acidobacteria1051Open in IMG/M
3300031446|Ga0170820_14416044All Organisms → cellular organisms → Bacteria → Acidobacteria763Open in IMG/M
3300031469|Ga0170819_15905690All Organisms → cellular organisms → Bacteria → Acidobacteria1050Open in IMG/M
3300031469|Ga0170819_17290930Not Available593Open in IMG/M
3300031708|Ga0310686_118733544All Organisms → cellular organisms → Bacteria → Acidobacteria628Open in IMG/M
3300031718|Ga0307474_10591395All Organisms → cellular organisms → Bacteria → Acidobacteria874Open in IMG/M
3300031718|Ga0307474_10766774All Organisms → cellular organisms → Bacteria → Acidobacteria763Open in IMG/M
3300031720|Ga0307469_11804460All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300031754|Ga0307475_10869707All Organisms → cellular organisms → Bacteria → Acidobacteria713Open in IMG/M
3300031823|Ga0307478_10664089All Organisms → cellular organisms → Bacteria → Acidobacteria873Open in IMG/M
3300031823|Ga0307478_10983192All Organisms → cellular organisms → Bacteria → Acidobacteria705Open in IMG/M
3300031823|Ga0307478_11170990All Organisms → cellular organisms → Bacteria → Acidobacteria641Open in IMG/M
3300031962|Ga0307479_11938092All Organisms → cellular organisms → Bacteria → Acidobacteria539Open in IMG/M
3300032174|Ga0307470_11399531All Organisms → cellular organisms → Bacteria → Acidobacteria577Open in IMG/M
3300032828|Ga0335080_11194337All Organisms → cellular organisms → Bacteria → Acidobacteria765Open in IMG/M
3300032828|Ga0335080_12261559All Organisms → cellular organisms → Bacteria → Acidobacteria521Open in IMG/M
3300032829|Ga0335070_11300804All Organisms → cellular organisms → Bacteria → Acidobacteria665Open in IMG/M
3300032898|Ga0335072_10639135All Organisms → cellular organisms → Bacteria → Acidobacteria1058Open in IMG/M
3300032954|Ga0335083_10184948All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella1924Open in IMG/M
3300032954|Ga0335083_10299144All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1414Open in IMG/M
3300033004|Ga0335084_10918956All Organisms → cellular organisms → Bacteria → Acidobacteria885Open in IMG/M
3300033158|Ga0335077_11881414All Organisms → cellular organisms → Bacteria → Acidobacteria559Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil11.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.87%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.30%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.30%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil4.72%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.72%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.15%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil3.15%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil3.15%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.94%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.94%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.94%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa3.94%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.36%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.36%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.36%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.57%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring1.57%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.57%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.57%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.57%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.57%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.79%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.79%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.79%
SedimentEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment0.79%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.79%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.79%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.79%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.79%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.79%
Sugar Cane Bagasse Incubating BioreactorEngineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor0.79%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.79%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000156Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobicEngineeredOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004475Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 62 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005876Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_401EnvironmentalOpen in IMG/M
3300005895Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_101EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300007982Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300010937Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014160Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaGEnvironmentalOpen in IMG/M
3300014164Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaGEnvironmentalOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018037Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021046Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depthEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021861Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027030Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF041 (SPAdes)EnvironmentalOpen in IMG/M
3300027045Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)EnvironmentalOpen in IMG/M
3300027330Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)EnvironmentalOpen in IMG/M
3300027537Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027625Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030058Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030730Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300030815Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030847Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031027Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_3EnvironmentalOpen in IMG/M
3300031090Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031239Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaGHost-AssociatedOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
NODE_072360723300000156Sugar Cane Bagasse Incubating BioreactorVNESAARPRRWWRFFLITAGIMLLGVLAGLWYTTTKSFQAYVRRRITKEVERITGGR
JGI12627J18819_1019364213300001867Forest SoilVKGPGPRPARWWKYLLIATGVLVASLLAGLWYTTTSSFQNYVHRRMVGEIERITGGRAEIGSFHVVP
JGIcombinedJ51221_1026494713300003505Forest SoilVKPRAARAPRWWKYILITAGILVIALLAGLWYTTTNSFQNYVHQRMVREIERITGGRAEIGSFHV
Ga0062384_10046466523300004082Bog Forest SoilVTAPAPKPRRRWKYLPIAAGTGLLLLLGGLWYTTTDSFQAYVRRRMVAEVERITGGRAEIGSFHVVPFHMQVEVR
Ga0068969_130479013300004475Peatlands SoilVTEPASRRGWKYALIAAGVVIAVLLAGLWYTTTDSFQAYARGKIVEELQRITGGRAEIGSFHIVPFH
Ga0058899_1141438413300004631Forest SoilVKPRAARAPRWWKYILITAGILVIALLAGLWYTTTNSFQNYVHQRMVREIERITGGRAEI
Ga0070709_1006070333300005434Corn, Switchgrass And Miscanthus RhizosphereVSERSARPRRWWKYILITAAALLVAVLAALWYTTTKSFQAYVRRRMVQEVERITGGRAEIGSFHVVP
Ga0070713_10204688823300005436Corn, Switchgrass And Miscanthus RhizosphereVTEFTPRPRRRWKYLLIAVGTSFILLLAALWYTTTSSFQAYVRRRVIAEVERITG
Ga0070730_1092623513300005537Surface SoilVSEPAARPQRWFKYILLALALVVVAILVGLWYTTTNSFQALVRRRMVKEVERITGGRAEVGSFHVVPFRLEVEVRNI
Ga0066692_1031269413300005555SoilVKQRAARAPRWWKYILITAGVMIIAVLAGLWYSTTNSFQNYVHQRMVREIERITGGRAEIGSFHVVPFHLQ
Ga0066692_1095319213300005555SoilVTEPTARPRRRRWWKYLLILAGAGFLFVVASLWYITTDSFQNLVRRRVIAEVERITGGHAEVG
Ga0066654_1010036533300005587SoilVREAPARPRRWWKYILITSAIGLIAVVLALWYTTTKSFQAYVRRRMIEEV
Ga0075300_100687233300005876Rice Paddy SoilVNQASARPRRWWKYFLIAAGMVVITALAALWYTSTKSFQAYVRHKMIEEVERIT
Ga0075277_106702923300005895Rice Paddy SoilVNQASARPRRWWKYFLIAAGMVVITALAALWYTSTKSFQAYVRHKMIEEVERITGGR
Ga0070717_1166983013300006028Corn, Switchgrass And Miscanthus RhizosphereVTEPAARPRRWWKYLLIAAGLVLIAVLAALWYSTTNSFQAYVRGRMIREVERITGGRAEISS
Ga0075029_10081842513300006052WatershedsVSQPAARAPRWWKYLLLTTAVFVIALLAGLWYTTTNSFQNYVHQRMVKEIERITGGRAEIGTFHVVPFH
Ga0075015_10101088323300006102WatershedsVTQPAARPRRWWKFILIAAGVLVLAVLAGLWYTTTDSFQSYVHRRMVQEIERITGGRAEIGKFHVVPFHLQVDIRNI
Ga0075015_10105308913300006102WatershedsVKPPAARAPRWWKYLLITTAILVIALLAGLWYTTTNSFQNYVHSRMVREIERITGGRAEIGSFHVVPFHL
Ga0075018_1080354723300006172WatershedsVTEPSPRPRRRWKYLLIVVGASFLFLLAGLWYTTTSSFQAYVRRRMIAEVERITGGRAE
Ga0070712_10019078533300006175Corn, Switchgrass And Miscanthus RhizosphereVKPRAARPPRWWKYILITAGILVIAVLAGLWYTTTNSFQNYVHQRMVKEIERITGG
Ga0070765_10104410013300006176SoilVSKPTAKPRRRVWWKYLLIVTGVALVCILCGLWYLTTESFQNLVRRRMVAEVERITGGRAEMGSFHTV
Ga0102924_113852313300007982Iron-Sulfur Acid SpringVTKSATRPRRWWKFLLLVTAVGVLALLSALWYSTTNSFQAFVRRRVVA
Ga0099828_1083362623300009089Vadose Zone SoilVTKPAARPRRWWKYLLIAAGVGVAAMLAALWYTTTDSFQAYVRRRMVSEVERITGGRAQIGSF
Ga0105241_1134445313300009174Corn RhizosphereVNEKSARPRRWWKYILITAAALLVAALAGLWYTTTKSFQAYVRRRMVE
Ga0116133_109596223300009623PeatlandVTTPVAKPRRWWKYLLIAAGIGMAAVLAAFWYTTTDSFQNYVRARMVAEIER
Ga0116216_1078313323300009698Peatlands SoilVTKPAARPRRWWKYLLLASGTGVVVLLAAFWYTTTNSFQAYVRRRMVAELERITGGRAEIGSFHVVPFHMQVEV
Ga0126378_1144665713300010361Tropical Forest SoilVSQPAARRRRWWKYLLIATSVGIVAGLAGLWYTTTESFQAYVRHRMVAELERITGGRAEIGSFHVVPFHMQVE
Ga0134128_1214910113300010373Terrestrial SoilVSERSARPRRWWKYILITAAALLVAVLAALWYTTTKSFQAYVRRRMVQEVERITGGRAEIGSFHVVPFHLQVE
Ga0134126_1159895513300010396Terrestrial SoilVNQASARPRRWWKYFLITAGIVVVTALAALWYTTTKSFQAYVRRRMI
Ga0126344_127029023300010866Boreal Forest SoilVTERARPPRWWKYLLLTVAVGVTALLAGLWYSTTNSFQAYVRRRMIAEVERITGGRAEIGSFH
Ga0137776_101889633300010937SedimentVTEPAARPPRWWKYLMIAAGVGLLALLAGLWYATTDSFQAYVRRRMVEEVERITGG
Ga0150983_1462252523300011120Forest SoilVTELPARPRRWWKYLLIVSGVGVLALLAALWYVTTDSFQRYVRRRVVAEIERITGGRAEVGTFHIVPFHMQ
Ga0137381_1113562613300012207Vadose Zone SoilVTKPAARPRRWWKYLLIAAGVGVAAMLAALWYTTTDSFQAYVRRRMVSEVERITGGRA
Ga0137384_1045216913300012357Vadose Zone SoilVTEPAARPRRWWKYLLMAAGAGVIAVLAALWYTTTNSFQAYVRSRMVAEVERITGGRTEIGNFHIVPFHLQVE
Ga0150984_11859304513300012469Avena Fatua RhizosphereVNQASARPRRWWKYFLIAAGIVVVTALAALWYTSTKSFQAYVRRRMIEE
Ga0137395_1037154833300012917Vadose Zone SoilVWWKYLLILIGVGILSLLVGLWYITTDSFQGLVRRRLIAEIERITGGRAEIGSFHT
Ga0164301_1157046523300012960SoilVNEKSARPRRWWKYILITAAALLVAVLAGLWYTTTKSCQAYVRRRMVQEVERITGG
Ga0126369_1101694523300012971Tropical Forest SoilVKEPAARPRRWWKYLLIAMGVGTVALLGGLWYTTTNSFQEYVRRRMVEQVESLTGGRAQIGSFHVVPF
Ga0181517_1032444213300014160BogLTPPATRRPRRWWKYLLIAAAAVFLSALAALWYTTTPSFQAYVRRRVVGEIER
Ga0181532_1053934213300014164BogVTGPTTARRRRWWKYLLIVTGLGFITLLAALWYITTDSFQNYVRRRIVAEVERITGGRAEAGSFHIVP
Ga0182007_1020273313300015262RhizosphereVNQASARPRRWWKYFLITAGIVVVAVLTALWYTTTRSFQAYVRRKMIEEVERITGGRAEIGTFHVVPFHL
Ga0132258_1013053353300015371Arabidopsis RhizosphereVTQPAARASRWWKFLLIGTGLLLIALLAGLWYTTTNSFQNYVHLRMVKEIERITGGQAEFGSFHVVPFHLQAEI
Ga0182041_1202942513300016294SoilVKPPAARPRRWWKYLLITAGVCVVALLAGLWYTTTDSFQNYVHRRMVGEIERITGGRAEIGRFHVVPFRLQVEIRNIT
Ga0182035_1013644613300016341SoilVTEPPARRRRWWKYLLIATSLILIAIVAGLWYTTTNSFQQYVRRRMVEEVERITGGKAEVGSFHVVPFHLQV
Ga0181505_1067752533300016750PeatlandVTGPAAIGPKSAKRRRWWKYLLIAAGIGMAAVLAAFWYTTTDSFQNYVRARMVAEIERITGGRA
Ga0187802_1025905923300017822Freshwater SedimentVTQFAASPRRWRWWKFLLIAAVVVVVAVLVGLWYTTTQSFQAFVRRRVIREVERITGGRAEVGSFHVVPFHLQVE
Ga0187819_1003955013300017943Freshwater SedimentVTAPAARRRRWWKYALIVSGAGLVAVLAALWYINTESFQAYARRRLVGELERVTGGRAQIGSFHIVPFHMQVEVRDITVHGTEA
Ga0187817_1080405313300017955Freshwater SedimentVTEPAARPRRWWKYLLIASGVGLLALLAALWYITTDSFQSYVRRRVVAEVERVTGGRAEVGTFHIVPFHMQVEV
Ga0187778_1106158723300017961Tropical PeatlandVTKPAPRPRSRWKFWLIAMGAVGVALLAGLWYTTTDSFQAYARAKIVEELERITGG
Ga0187778_1125292123300017961Tropical PeatlandVTEPAPRPRRRWKFWLIAMGAVGVALLAGLWYTTTDSFQAYARAKIVEELERITGGRA
Ga0187804_1029481313300018006Freshwater SedimentVTQFAASPRRWRWWKFLLIAAVVVVVAVLVGLWYTTTQSFQAFVRRRVIREVERITGGRAEVGS
Ga0187804_1046758713300018006Freshwater SedimentVTEPAARPRRWWKYLLIASGVGLLALLAALWYITTDSFQSYVRRRVVAEVERITGGRA
Ga0187883_1014895533300018037PeatlandVSVPAPAPAGRPRRWWKYLLLATGLGVVALLAGLYYVTTDSFQNYVRRRVVAEVERIT
Ga0187887_1026310923300018043PeatlandVTVPAPAPASRPRRWWKYLLLVTGVGVVAVLAGLYYVTTDSFQNYVRRRVVAEVERV
Ga0187765_1121141913300018060Tropical PeatlandVTETAARPRRWWKIILITSGVLIVAVLAGFWYTTTESFQSYVHRRMVQEIERITGGRAEIGKFHVVPFHLQ
Ga0187772_1007694613300018085Tropical PeatlandVTELAASPRRWRWWKLLLIAALVGVVAVLAGLWYTTTQSFQAFVRRRVIREVERITGGRAEVGSFHV
Ga0187770_1131803513300018090Tropical PeatlandVIQPAARPRRWWKFFLISTGLIVAAILAGLWYTTTQSFQDYVRRRMVAEVERITGGRADVGSFHVVPFHLQVEVRN
Ga0066655_1014422333300018431Grasslands SoilVREAPARPRRWWKYILITSAIGLIAVVLALWYTTTKSFQAYVRRRMIEEVERITGGRAEIGGFNVVHFHLRV
Ga0066662_1082384923300018468Grasslands SoilVTEPPARPRRWWKPVLLVAGVGFLALLAALWYTTTDSFQSYVRRRMVAEVERIT
Ga0210395_1126084113300020582SoilVTEPAARPPRWWKFLLLVIAVGLVSLLAALWYSTTDSFQAFVRRRVVAEIERITGGRAEVGRFHVVP
Ga0215015_1008611133300021046SoilVSQPTGRPSRRVWWKYLLILAGAGILSILAGLWYITTDSFQGLVRRRLVAEVERITGGRAEIGSFHTTPF
Ga0210400_1089539013300021170SoilVTELPARPRRWWKYLLIVSGVGVLALLAALWYVTTDSFQRYVRRRVVAEIERITGGRA
Ga0210396_1056393013300021180SoilVTGPSPRPRRRWKYLLIAAGAVVFLLVAGLWYTTTQSFQAYVRRRMIAEVERITGGRAEIGSFHVVQFHLQVE
Ga0210388_1070606523300021181SoilVTEPAARPPRWWKFLLLVVAVGLISLLAALAYSTTESFQAYVRRRVVAEIERITGGRAEV
Ga0210393_1071071623300021401SoilVTEPAARPRRWWKHSWWKYLLIAAGVGIAAVVAALWYITTDSFQGYVRGRVVAEIERITGGRAEVG
Ga0210391_1082170423300021433SoilVTEPAARPRRWWKYLLIAAGAFLLLGLASFWYMTTDSFQAYVRARMVKEVE
Ga0210390_1025593513300021474SoilVTDAPARPRRWWRYLLIAGAASLAVALLGLWYTTTNTFQSYVRQRMVAEIERISGGRAEVGSFHIVP
Ga0187846_1029133713300021476BiofilmVTVPAARPRRWWKYLLIATALLIAALLGGLWYTTTDSFQKYVRGRMIAEIERITGGRAEV
Ga0210402_1095858623300021478SoilVTGTSPRPRRRWKYLLIAAGTVVLLLVAGLWYTTTESFQAYVRRRMIAE
Ga0210409_1072197613300021559SoilVTEPAARPPRWWKFLLLVIAAGMVALLAALWYSTTDSFQAYVRQRVVAEV
Ga0213853_1023932013300021861WatershedsVTEPATRPRRRWKYLLIAGGAGLALLLGALWYTTTNSFQAYVRRRMVAEVER
Ga0242669_101517513300022528SoilVKPRAARAPRWWKYILITAGILVIALLAGLWYTTTNSFQNYVHQRMVREIERITGGRA
Ga0242660_109936023300022531SoilVTELPARPRRWWKYLLIVSGVGVLALLAALWYVTTDSFQRYVRRRVVAEIERITGGRAEVGTF
Ga0212123_1077718813300022557Iron-Sulfur Acid SpringVTKSATRPRRWWKFLLLVTAVGVLALLSALWYSTTNSFQAFVRRRVVAEVERITG
Ga0242661_116216313300022717SoilVSAPAARPPRWWKFLLLIVGAGVVAILAALWYSTTDSFQAFVRRRVVAEVERITGGRAEI
Ga0207692_1079135123300025898Corn, Switchgrass And Miscanthus RhizosphereVTEPAARPRRWWKYLLIAGGIVITAILAALWYTTTNSFQAYVRGRLVSEVERITGGR
Ga0207685_1075106313300025905Corn, Switchgrass And Miscanthus RhizosphereVSERSARPRRWWKYILITAAALLVAVLAALWYTTTKSFQAYVRRRMVQEVERITGGRAEIGSFHVVPFHLQ
Ga0207671_1094991123300025914Corn RhizosphereVSEKSARPRRWWKYILITAAALLAAVLAALWYTTTKSFQAYVRRHMVEEVERITGGRAEIGSFH
Ga0207660_1081762313300025917Corn RhizosphereVNEKSARPRRWWKYILITAAALLVAALAGLWYTTTKSFQAYVRRRMVEEVE
Ga0207700_1077173823300025928Corn, Switchgrass And Miscanthus RhizosphereVTEPAARPRRWWKYVLVLAGAGVVLLLAGLWYIRTESFQAYVRRRMIAEVERITGG
Ga0207700_1170855913300025928Corn, Switchgrass And Miscanthus RhizosphereVTEFTPRPRRRWKYLLIAVGTSFILLLAALWYTTTSSFQAYVRRRVIAEVERITGGRAEI
Ga0208240_100226113300027030Forest SoilVTAPTATRRRRWWKYLLIASSLGFITLLAGLWYITTDSFQNYVRRRMVAEVERITGGRAEAGSFHVVPF
Ga0207726_104585023300027045Tropical Forest SoilVTPPAVRPRRWWKYLLIVTGVGIAAILGGLWYTTTESFQSYVRSRMVEE
Ga0207777_100467913300027330Tropical Forest SoilVTPPAVRPRRWWKYLLIVTGVGIAAILGGLWYTTTESFQSYVRSRMVEEVERITGGRAEI
Ga0209419_109563913300027537Forest SoilVTEPATRPPRWWKFLLLVIAVGLLALLAAIWYSTTDSFQAYVRKRVIAEVERITGGRAEIGSFHVVPFH
Ga0208044_109118613300027625Peatlands SoilVSEPAARSRRWWMYALIVGGAGLLALMAGLWYTTTDSFQTYARRRLVSELERITGGRA
Ga0209811_1002569333300027821Surface SoilVTEPAARPRRWWKYLLLAGGIVITVSLAALWYTTTNSFQAYVRGRLVSEVERITGGRAEIGSFHVVP
Ga0209580_1011373833300027842Surface SoilVTEPATRPPRWWKFLLLIIAVGVVALLAALWYSTTDSFQAFVRRRVVAEIERITGGRAE
Ga0209517_1054457723300027854Peatlands SoilVTQPTARPRRWWKYLLIVTGVGVLAVLAALWYITTDSFQSYVRRRVVAEVERITGGRAEVGSFHI
Ga0209275_1006400633300027884SoilVTGPTPTRRRRWWKYLLIASGLGFVTLLAALWYITTDSFQNYVRRRIVAEVERITGGRAEAGSF
Ga0308309_1034943233300028906SoilVTEPAARPRRWWKYLLIAAGAFLLLGLASFWYMTTDSFQAYVRARMVKEVERITGGRAEIGSFH
Ga0311338_1096548923300030007PalsaVTEAAARPRRRWKYLLIAAGTCLLLLLASLWYTTTDSFQAYVRLRLVTELERITGGRAEIGRFHVV
Ga0302179_1021283323300030058PalsaVSAPAPAARPRRWWKYVLLATGLGVVAVLFGLWYITTDSFQNYVRQRMVAEVERITGGR
Ga0311370_1094135223300030503PalsaVTEAAARPRRRWKYLLIAAGTCLLLLLASLWYTTTDSFQAYVRLRLVTELERITGGR
Ga0311370_1126621713300030503PalsaVSEPAVAPPRRKWWKYLLLVFAVGVVCLLAGLWYLTTESFQAYVRRRIVAEVERVTGGRAQIGSIHTVPFHMQVEVR
Ga0307482_124063223300030730Hardwood Forest SoilVNQTAATPRRWWRYLLIGGGVAVILLLCGLWYITTASFQSYVRRRLVTEVERITGGRAEIGSFHV
Ga0265461_1396590613300030743SoilVTEPAARPRRWWKYFWIAAGVGLFAFLGALWYTTTNSFQAYVRSRMVSEVVRKKKKRKKK
Ga0265746_101089213300030815SoilVSEPGASPPRRKWWRYALIVAGLGLVCLLAGFWYLTTESFQAYVRRRIVAEVERVTGGRADIGSIHTVPFHMQVEIRDLTVHGREAASEIP
Ga0075405_1169894323300030847SoilVTEPAAKPRGRGKYLLIAAGVGLIGVLAALWYTTTDSFQAYVRRRMIAEVERITGGRAEIGSFH
Ga0073994_1119069523300030991SoilVTQPAARPPRWWKFLLLVIAVGMVALLAALWYSTTDSFQAFVRRRVVAEVERIT
Ga0302308_1029910913300031027PalsaVSAPAPAARPRRWWKYVLLATGLGVVAVLFGLWYITTDSFQNYVRQRMVAEVERITGGRAEVGSFHVVPFH
Ga0265760_1002093233300031090SoilVSEPDAPPPRRKWWRYALIVAGLGLVCLLAGFWYLTTESFQAYVRRRIVAEVERVTGGRA
Ga0170823_1649948723300031128Forest SoilVTDSPARPRRWWKYLLVATGVGIVAMLGGLWYTTTNSFQAYVRSRMVAEVERITGGHTQIGSFHVV
Ga0170824_12152822113300031231Forest SoilVSEPVARPRRWWKYLLIAAGAGLVAVLAGLWYTTTNSFQAYVRGRMVEEVERITGGRAEIGSF
Ga0170824_12445321533300031231Forest SoilVSGPAARPRRWWRYLLIAAGVSVVAVLAALWYTTTDSFQAYVRRRMVSEVERITGGRAEIGINNKKVNKKS
Ga0265328_1010440913300031239RhizosphereVTESPARPRRWWKFLLIATGVGIIAMLGALWYTTTDSFQAYVRSRMVAEVERITGGRAQIGSF
Ga0170820_1441604423300031446Forest SoilVTEPAAKPRGRGKYLLIAAGVGLIGVLAALWYTTTDSFQAYVRRRMIAEVERITGGRAEI
Ga0170819_1590569013300031469Forest SoilVTEPAARPRRWWRYLLIAAGVSAVAVLAALWYTTTDSFQAYVRRRMVSEVERITGGRAEIGSFHIV
Ga0170819_1729093013300031469Forest SoilVSEPVARPRRWWKYLLIAAGAGLVAVLAGLWYTTTNSFQAYVRGRMVEEVERITGG
Ga0310686_11873354423300031708SoilVTEPAARPPRWWKFLLLVVAVGLAFLLAALAYSTTDSFQAYVRRRVVAEIERITGGRAEVGSFHVV
Ga0307474_1059139523300031718Hardwood Forest SoilVTQPTARPRRRVWKYLLIISGIALVCLLSGLWYLTTQSFQNLVRRRMTAEVERITGGRAEIGSFHTVPFHLQVDVRN
Ga0307474_1076677423300031718Hardwood Forest SoilVTGTAPRRRRLWKYLLIVAGAGVLLVLAGLWYTTTDSFQAYVRQRMVAEVERITGGRAEIGSFHVVPF
Ga0307469_1180446013300031720Hardwood Forest SoilVNEPSTARPRRRWKYLLIFFGACIVLALIGLWYTTTNSFQAYVRRRLVQEVERITG
Ga0307475_1086970713300031754Hardwood Forest SoilVTEPATRPPRWWKFLLLIIAVGVVALLAALWYSTTDSFQAFVRRRVVAEI
Ga0307478_1066408923300031823Hardwood Forest SoilVTEPAARPRRWWKYLLLASAVLLVAILAGLWYTTTDSFQAYVRSRMVEEVDRMTGG
Ga0307478_1098319223300031823Hardwood Forest SoilVTEPATRPPRWWKFLLLVIAVGVVALLAALWYSTTDSFQAFVRRRVVAEIERITGGRAEVGSFH
Ga0307478_1117099013300031823Hardwood Forest SoilVTKRARPPRWWKYLLITVAVGVTTLLAGLWYSTTNSFQAYVRRRMIAEVERITGGRAEIGSFHVVPFHLQVEV
Ga0307479_1193809223300031962Hardwood Forest SoilLTEPAARPRIRAWWKYLLILTGAVVLSVILGLWYITTDSFQSLVRRRVVAEIERITGGRAEV
Ga0307470_1139953123300032174Hardwood Forest SoilVTEPAARPRRWWKYLLLATAVLLVAILAGLWYTTTNSFQAYVRSRMVEEVDRMTGGRTDIGSFHVVPFRLQVEVRNI
Ga0335080_1119433723300032828SoilVTEPVARPRRRWKYLLIITGTVVVLLLAGLWYTTTNSFQAYVHRRMIAEVER
Ga0335080_1226155923300032828SoilVTTAAVRPRRRWWKFLLIASGSGIVVLLLLLWYTTTDSFQAYVRQRMVAELERITGGRAE
Ga0335070_1130080423300032829SoilVTAPAARRRCWWKYLLILAGAGFALLLIAFWYITTDSFQSYVRRRMVSEIERNTGGSA
Ga0335072_1063913513300032898SoilVKTPGASPRRWWKYFFILAGTVFLILIGAAWYITTDSFQAYVRHRLVAEVERITGGRAEIGSFHIVPFHM
Ga0335083_1018494833300032954SoilVSEPAARPRRWWKYLLVAAGVAVIGVLAGLWYTTTNSFQSYVRGRMIEEVE
Ga0335083_1029914433300032954SoilVTEPVARPRRWWKYLLLVFASGIVFLLAGLWYTTTESFQAYVRSRMVEEVERLTGGKA
Ga0335084_1091895613300033004SoilVNTPAARPRRWWKYLLIATGVGAVALLAALWYTTTSSFQDYVRLRMVEEVERLTGGRAQIGSFHVVPFH
Ga0335077_1188141423300033158SoilVMQLTARRRRWWKYILIGTGAGILAGLAGLWYTTTESFQAYVRRRVVSEVERITGGR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.