Metagenome / Metatranscriptome Family F066191

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066191
Family Type	Metagenome / Metatranscriptome
Number of Sequences	127
Average Sequence Length	95 residues
Representative Sequence	PLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Number of Associated Samples	108
Number of Associated Scaffolds	127

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.21 %
% of genes from short scaffolds (< 2000 bps)	92.91 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.386 % of family members)
Environment Ontology (ENVO)	Unclassified (22.047 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.394 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 64.80% β-sheet: 0.00% Coil/Unstructured: 35.20%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 127 Family Scaffolds
PF06736	TMEM175	81.10
PF07690	MFS_1	7.87
PF02423	OCD_Mu_crystall	3.15
PF00196	GerE	0.79
PF02738	MoCoBD_1	0.79

COG ID	Name	Functional Category	% Frequency in 127 Family Scaffolds
COG3548	Uncharacterized membrane protein	Function unknown [S]	81.10
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	3.15

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	98.43 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	79.53 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.36 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.75 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.36 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.15 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.36 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.79 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.79 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.79 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.15 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.36 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.79 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.79 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.15 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.36 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.79 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.79 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.79 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y02GRE1L	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	694	Open in IMG/M
3300001546\|JGI12659J15293_10141243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300002245\|JGIcombinedJ26739_101011931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	716	Open in IMG/M
3300004082\|Ga0062384_100194037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1192	Open in IMG/M
3300004092\|Ga0062389_100695573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1190	Open in IMG/M
3300005434\|Ga0070709_10168279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1529	Open in IMG/M
3300005434\|Ga0070709_11247308	All Organisms → cellular organisms → Bacteria → Terrabacteria group	598	Open in IMG/M
3300005435\|Ga0070714_100687777	All Organisms → cellular organisms → Bacteria → Terrabacteria group	986	Open in IMG/M
3300005436\|Ga0070713_102467388	All Organisms → cellular organisms → Bacteria → Terrabacteria group	502	Open in IMG/M
3300005439\|Ga0070711_100649252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	884	Open in IMG/M
3300005439\|Ga0070711_100865667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	770	Open in IMG/M
3300005468\|Ga0070707_100173952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2098	Open in IMG/M
3300005537\|Ga0070730_10534226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300005591\|Ga0070761_10330631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	921	Open in IMG/M
3300005602\|Ga0070762_10177960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1290	Open in IMG/M
3300005602\|Ga0070762_10253144	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1096	Open in IMG/M
3300005719\|Ga0068861_100246704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1521	Open in IMG/M
3300005952\|Ga0080026_10274840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	512	Open in IMG/M
3300006028\|Ga0070717_10398954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1235	Open in IMG/M
3300006028\|Ga0070717_11736553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300006163\|Ga0070715_10266828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	901	Open in IMG/M
3300006576\|Ga0074047_12024191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300006755\|Ga0079222_10229614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1146	Open in IMG/M
3300006806\|Ga0079220_10453301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	859	Open in IMG/M
3300006893\|Ga0073928_10475178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	901	Open in IMG/M
3300009665\|Ga0116135_1197012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	768	Open in IMG/M
3300010154\|Ga0127503_11100245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	589	Open in IMG/M
3300010303\|Ga0134082_10133898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	996	Open in IMG/M
3300010371\|Ga0134125_10755184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1071	Open in IMG/M
3300010379\|Ga0136449_101237069	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1171	Open in IMG/M
3300010379\|Ga0136449_101240993	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300010867\|Ga0126347_1266503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1391	Open in IMG/M
3300010880\|Ga0126350_10060519	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1627	Open in IMG/M
3300010880\|Ga0126350_12422441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	910	Open in IMG/M
3300011119\|Ga0105246_12215998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	535	Open in IMG/M
3300012198\|Ga0137364_10116228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1901	Open in IMG/M
3300012209\|Ga0137379_10228609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1774	Open in IMG/M
3300012354\|Ga0137366_10465113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	916	Open in IMG/M
3300012508\|Ga0157315_1062653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300012971\|Ga0126369_12375135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300012971\|Ga0126369_13199413	All Organisms → cellular organisms → Bacteria → Terrabacteria group	536	Open in IMG/M
3300012985\|Ga0164308_11486810	All Organisms → cellular organisms → Bacteria → Terrabacteria group	621	Open in IMG/M
3300013307\|Ga0157372_13171201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300014501\|Ga0182024_10108644	All Organisms → cellular organisms → Bacteria	4009	Open in IMG/M
3300014501\|Ga0182024_10682801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1271	Open in IMG/M
3300014657\|Ga0181522_10329703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	908	Open in IMG/M
3300017792\|Ga0163161_10597173	All Organisms → cellular organisms → Bacteria → Terrabacteria group	910	Open in IMG/M
3300017937\|Ga0187809_10346029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	556	Open in IMG/M
3300017995\|Ga0187816_10543848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300018006\|Ga0187804_10182202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	893	Open in IMG/M
3300018058\|Ga0187766_10639803	All Organisms → cellular organisms → Bacteria → Terrabacteria group	729	Open in IMG/M
3300020581\|Ga0210399_11249006	All Organisms → cellular organisms → Bacteria → Terrabacteria group	587	Open in IMG/M
3300020583\|Ga0210401_10169920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2034	Open in IMG/M
3300021170\|Ga0210400_10436858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1080	Open in IMG/M
3300021171\|Ga0210405_10329551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1205	Open in IMG/M
3300021401\|Ga0210393_10355580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1192	Open in IMG/M
3300021401\|Ga0210393_10717335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	815	Open in IMG/M
3300021402\|Ga0210385_10426671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	998	Open in IMG/M
3300021402\|Ga0210385_11078295	All Organisms → cellular organisms → Bacteria → Terrabacteria group	617	Open in IMG/M
3300021402\|Ga0210385_11349332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300021403\|Ga0210397_10182481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1489	Open in IMG/M
3300021406\|Ga0210386_10092907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2461	Open in IMG/M
3300021433\|Ga0210391_10916651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	683	Open in IMG/M
3300021474\|Ga0210390_10110823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2295	Open in IMG/M
3300021478\|Ga0210402_10335242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1402	Open in IMG/M
3300021479\|Ga0210410_10579893	All Organisms → cellular organisms → Bacteria → Terrabacteria group	997	Open in IMG/M
3300021559\|Ga0210409_10372271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1281	Open in IMG/M
3300021560\|Ga0126371_12027819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M
3300022467\|Ga0224712_10693663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300024283\|Ga0247670_1110899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300025898\|Ga0207692_10649998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300025906\|Ga0207699_10183400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1408	Open in IMG/M
3300025910\|Ga0207684_10733673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	838	Open in IMG/M
3300025916\|Ga0207663_10462975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	979	Open in IMG/M
3300025918\|Ga0207662_10006578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6274	Open in IMG/M
3300025922\|Ga0207646_10213514	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1743	Open in IMG/M
3300025928\|Ga0207700_10317579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1349	Open in IMG/M
3300025929\|Ga0207664_10394484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1230	Open in IMG/M
3300025929\|Ga0207664_10580819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1006	Open in IMG/M
3300025981\|Ga0207640_10863228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	788	Open in IMG/M
3300026023\|Ga0207677_10593408	All Organisms → cellular organisms → Bacteria → Terrabacteria group	971	Open in IMG/M
3300026078\|Ga0207702_10657343	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1031	Open in IMG/M
3300026078\|Ga0207702_11170021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	763	Open in IMG/M
3300026984\|Ga0208732_1022803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300027047\|Ga0208730_1021811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300027066\|Ga0208236_1018815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300027568\|Ga0208042_1123039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	654	Open in IMG/M
3300027648\|Ga0209420_1042569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1385	Open in IMG/M
3300027684\|Ga0209626_1217838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300027855\|Ga0209693_10548948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	549	Open in IMG/M
3300027867\|Ga0209167_10759192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300027884\|Ga0209275_10858522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300027889\|Ga0209380_10112234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1582	Open in IMG/M
3300027895\|Ga0209624_10142966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1579	Open in IMG/M
3300027915\|Ga0209069_10998325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300028718\|Ga0307307_10073224	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1024	Open in IMG/M
3300028784\|Ga0307282_10077771	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1515	Open in IMG/M
3300028828\|Ga0307312_10046221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2585	Open in IMG/M
3300028879\|Ga0302229_10302389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	719	Open in IMG/M
3300028885\|Ga0307304_10315023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300029943\|Ga0311340_10636649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300029951\|Ga0311371_11892872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300029999\|Ga0311339_11599374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300030013\|Ga0302178_10392731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300030503\|Ga0311370_10488882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1513	Open in IMG/M
3300030503\|Ga0311370_10779477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1106	Open in IMG/M
3300030617\|Ga0311356_10989467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	786	Open in IMG/M
3300030730\|Ga0307482_1115715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	750	Open in IMG/M
3300030739\|Ga0302311_10379593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1000	Open in IMG/M
3300031234\|Ga0302325_10059210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	7526	Open in IMG/M
3300031234\|Ga0302325_11415026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	903	Open in IMG/M
3300031236\|Ga0302324_100769860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1345	Open in IMG/M
3300031236\|Ga0302324_100857451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1256	Open in IMG/M
3300031236\|Ga0302324_101003229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1134	Open in IMG/M
3300031525\|Ga0302326_10569299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1695	Open in IMG/M
3300031525\|Ga0302326_10877412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1279	Open in IMG/M
3300031708\|Ga0310686_106404121	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1259	Open in IMG/M
3300031708\|Ga0310686_106620744	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1158	Open in IMG/M
3300031996\|Ga0308176_10366074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1428	Open in IMG/M
3300032174\|Ga0307470_11708311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300032205\|Ga0307472_102498479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300032783\|Ga0335079_10311204	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1716	Open in IMG/M
3300032805\|Ga0335078_10019499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	10082	Open in IMG/M
3300032895\|Ga0335074_10381773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1542	Open in IMG/M
3300032896\|Ga0335075_10914443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	802	Open in IMG/M
3300032955\|Ga0335076_11434939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300033545\|Ga0316214_1037649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	692	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.34%
Host-Associated	Host-Associated	7.87%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.46%
Aquatic	Environmental → Aquatic	7.87%
Plants	Host-Associated → Plants	7.87%
Solid Waste	Engineered → Solid Waste	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.87%
Peat	Environmental → Terrestrial → Peat	12.60%
Freshwater	Environmental → Aquatic → Freshwater	6.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.57%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.79%
Sediment	Environmental → Aquatic → Sediment	0.79%
Roots	Host-Associated → Plants → Roots	0.79%
Grass	Engineered → Solid Waste → Grass	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.80%
Loam	Environmental → Terrestrial → Soil → Loam	25.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.09%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.51%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.57%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.79%
Composting	Engineered → Solid Waste → Grass → Composting	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.02%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.51%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.36%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.36%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.57%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.79%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.79%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.79%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.39%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	12.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.30%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.51%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.36%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.36%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.36%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.36%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.57%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.57%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.79%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.79%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.79%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027066	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF005 (SPAdes)	Environmental	Open in IMG/M
3300027568	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030013	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_3	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030739	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_3	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_00055280	2170459015	Switchgrass, Maize And Mischanthus Litter	LNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLEILNGQDRVLAILDNFASKDMPGRQAHIQDCVDQILAKGRPESRGRVAPG
JGI12659J15293_101412432	3300001546	Forest Soil	SIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDQFASKDMPGRQRQIQDCVDQILAKVDAQPAGS*
JGIcombinedJ26739_1010119312	3300002245	Forest Soil	PWPLLLTILNLPQLSIMISLQVSANRAQATSDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDQFASKDMPGRQRQIQDCVDQILAKVDARPAGS*
Ga0062384_1001940371	3300004082	Bog Forest Soil	WPLLLTILNLPQLSIMISLQVSANRSQTASDRRAIADHETLIALHEMDKQQLDILNGQDRVLALLDNFASKDMPGRQTEIQNCVNQILAKVDSSPAAG*
Ga0062389_1006955731	3300004092	Bog Forest Soil	PLLLTILNLPQLSIMISLQVSANRSQTASDRRAIADHETLIALHEMDKQQLDILNGQDRVLALLDNFASKDMPGRQTEIQNCVNQILAKVDSSPAAG*
Ga0070709_101682791	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	FLGNIVGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLEILNGQDRVLAILDNFASKDMPGRQAHIQDCVDQILAKVDPKAAAG*
Ga0070709_112473082	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	AQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS*
Ga0070714_1006877771	3300005435	Agricultural Soil	RAQAASDRRAIADHETLIALHEMARQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDQRPEGADGQVPA*
Ga0070713_1024673881	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS*
Ga0070711_1006492522	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	PWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQAHIQDCVNQILAKVDPKAAAG*
Ga0070711_1008656671	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS*
Ga0070707_1001739523	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	PWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASRDMPGRQAHIQDCVDQILAKVDPRPAAS*
Ga0070730_105342262	3300005537	Surface Soil	KTPWPLLLTILNLPQLSIMISLQVSANRAQTASDRRALADHETLIALHEMAKQQLDILNGQDRVLAMLDTFASKDMPGRQRDIQDCVDKILAKVDPAAAAG*
Ga0070761_103306311	3300005591	Soil	GNIVGFDKTPWPLLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDAGPAAG*
Ga0070762_101779603	3300005602	Soil	WPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMALRQLDILNGQDRVLAILNTFASKDMPGRQSEIQDCVNKILATVTKTPGAGQPAAN*
Ga0070762_102531443	3300005602	Soil	ISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDAEPASS*
Ga0068861_1002467043	3300005719	Switchgrass Rhizosphere	KTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMARQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS*
Ga0080026_102748401	3300005952	Permafrost Soil	IVGFDKTPWPLLLTLLNLPQLSIMISLQVSANRAQTAGDKRAIADHETLIALHEMGKQQIAILNQQDDVLAILDTFASKDMPGRQQQIQDTVSKILVAVSGPATA*
Ga0070717_103989543	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GNIVGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS*
Ga0070717_117365532	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPRPAAS*
Ga0070715_102668282	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	PWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLEILNGQDRVLAILDNFASKDMPGRQARIQDCVNQILAKVDPKAAAG*
Ga0074047_120241912	3300006576	Soil	LGNIVGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS*
Ga0079222_102296143	3300006755	Agricultural Soil	VGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDQKAEGADG*
Ga0079220_104533011	3300006806	Agricultural Soil	QLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPRPAAS*
Ga0073928_104751782	3300006893	Iron-Sulfur Acid Spring	GFDKTPWPLLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMALRQLDILNGQDRVLDILNNFASKDMPGRQAHIQDCVDQILAKVDPGTAGQPA*
Ga0116135_11970121	3300009665	Peatland	LLLTILNLPQLSIMISLQVSANRAQAASDRRALADHETLISLHEMAKQQIEILNGQNKVLAILEDFAQEDFTGTQGKIEDTVNKIYAIVGSNSQDAPAGES*
Ga0127503_111002452	3300010154	Soil	DKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAVS*
Ga0134082_101338981	3300010303	Grasslands Soil	PWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQAHIQDCVDQILAKVDPKPAAS*
Ga0134125_107551842	3300010371	Terrestrial Soil	PLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPRPAAS*
Ga0136449_1012370692	3300010379	Peatlands Soil	PQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDQVLAILDNFASKDMPGRQRHIQDCVDKILARVDPGTAEG*
Ga0136449_1012409931	3300010379	Peatlands Soil	PQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDKILAKVDAGTGEG*
Ga0126347_12665031	3300010867	Boreal Forest Soil	PLLLTILNLPQLSIMISLQVSANRAQTASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAMLNNFASKDLPGRQRHMQDCVDQILAKVNPAAADG*
Ga0126350_100605193	3300010880	Boreal Forest Soil	FDKTPWPLLLVILNLPQLSIMISLQVSANRSQAASDRRALADHETLIALHQMGKQQIDILNGQNQVLAMLDNFASKDMPGKQAEIQDAVHQILALVSHEPTAG*
Ga0126350_124224411	3300010880	Boreal Forest Soil	KTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMSKQQLDILNGQDRVLAMLDNFASKDMPGTQREIQDCVNQILVKVGQPPAVG*
Ga0105246_122159982	3300011119	Miscanthus Rhizosphere	AQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDQKPEGADGQVQA*
Ga0137364_101162283	3300012198	Vadose Zone Soil	ANRAQAASDRRAIADHETLIALHEMAKQQLEILNGQDRVLAILDNFASKDMPGRQAHIQDCVDQILAKVDSRPAAAGG*
Ga0137379_102286093	3300012209	Vadose Zone Soil	DKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNAQDRVLEMLDTFASKDMPGRQREIQDCVDKILAKVDPEPAAS*
Ga0137366_104651131	3300012354	Vadose Zone Soil	GQLLGFDPLPWPLLLTLLNLPQLSIMISLQVSANRAQVASDRRAIADHETLIALHEMSKQQIDILHGQDQVLALLDQFAGKDIPGMQQRIAETTDKILAIVGSTGAAG*
Ga0157315_10626531	3300012508	Arabidopsis Rhizosphere	LPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMATQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS*
Ga0126369_123751352	3300012971	Tropical Forest Soil	WPLLLTILNLPQLSIMISLQVSANRAQTASDKRAIADHETLIALHEMAKQQIKILHGQDRVLEMLDNFASKDMPGRQAEIMAACTNILGCVEPKTASG*
Ga0126369_131994131	3300012971	Tropical Forest Soil	AASDRRAIADHETLIALHEMARQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDQKPEGADGQVQA*
Ga0164308_114868102	3300012985	Soil	QVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQAHIQDCVNQILAKVDPKAAAG*
Ga0157372_131712011	3300013307	Corn Rhizosphere	LPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS*
Ga0182024_101086441	3300014501	Permafrost	IVGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQTASDKRAIADHETLIALHEMGKQQLAILNQQDDVLAILDTFASKDMPGRQAQIQDTVNKILAAVAGPATA*
Ga0182024_106828011	3300014501	Permafrost	MISLQVSANRSQAASDGRAIADHETLISLHEMARQQIELLKGQDAVLGILENFASKDMPGRQREIQDSVQQILAVVSHQPGAASGQVQA*
Ga0181522_103297031	3300014657	Bog	GFDKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMSKQQLDILNGQDRVLALLDNFASKDMPGKQNEIQACVNQILATVKQKPAAN*
Ga0163161_105971732	3300017792	Switchgrass Rhizosphere	ISLQVSANRAQAASDRRAIADHETLIALHEMARQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0187809_103460291	3300017937	Freshwater Sediment	LPQLSIMISLQVSANRAQAASGRRASADHETLIALHEMAKQQLHILHGQDKVLAILDNFASKDMPGRQREIQDAVNKILAAVAKPA
Ga0187816_105438482	3300017995	Freshwater Sediment	WPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDQVLAILNNFASHDMPGRQAHIQDCVDEILAKVNGTPAAG
Ga0187804_101822022	3300018006	Freshwater Sediment	GNIVGFDKTPWPLLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLHILHGQDKVLAILDNFASKDMPGRQREIQDAVNKILAAVAKPA
Ga0187766_106398031	3300018058	Tropical Peatland	MISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDAKPAAG
Ga0210399_112490062	3300020581	Soil	QVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDTGPAGS
Ga0210401_101699203	3300020583	Soil	KTPWPLLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDTQPAAS
Ga0210400_104368582	3300021170	Soil	LVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDAGPAAG
Ga0210405_103295511	3300021171	Soil	NVVGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLEILNGQDRVLAILDNFASKDMPGRQARIQDCVNQILAKVDPKAAAG
Ga0210393_103555801	3300021401	Soil	TPWPLLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDTQPAAS
Ga0210393_107173351	3300021401	Soil	NIVGFDKTPWPLLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLEILNGQDRVLAILDQFASKDMPGRQRQIQDCVDQILAKVDAQPAGS
Ga0210385_104266711	3300021402	Soil	VWLFLGNIVGFDKTPWPLLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDAEPASS
Ga0210385_110782952	3300021402	Soil	IMISLQVSANRSQAASDRRAIADHETLIALHEMARQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDTGPAGR
Ga0210385_113493322	3300021402	Soil	WPLLLTILNLPQLSIMVSLQVSANRAQAASDKRAIADHETLISLHEMAKQQIDILHGQDTVLAMLNTFASKDMPGKQDAIEQAVNEILAAVGGRAAPSPEAGG
Ga0210397_101824813	3300021403	Soil	ILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDAGPAAG
Ga0210386_100929071	3300021406	Soil	GFDKTPWPLLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDTSPAGS
Ga0210391_109166511	3300021433	Soil	VILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDAGPAAG
Ga0210390_101108231	3300021474	Soil	PQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLDILNNFASKDMPGRQAQIQNCVDQILAKVDAGPAAG
Ga0210402_103352423	3300021478	Soil	ILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLEILNGRDRVLAILDNFASKDMPGRQARIQDCVNQILAKVDPKAAAG
Ga0210410_105798932	3300021479	Soil	NRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDAEPASS
Ga0210409_103722713	3300021559	Soil	QLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLEILNGQDRVLAILDNFASKDMPGRQAHIQDCVDQILAKVDSKPAAAGG
Ga0126371_120278191	3300021560	Tropical Forest Soil	GNIVGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQTASDKRAIADHETLIALHEMAKQQIRILHGQDRVLEMLDNFASKDMPGRQAEIMAACTNILGCVEPKTASG
Ga0224712_106936632	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	LGNIVGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0247670_11108991	3300024283	Soil	LPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0207692_106499982	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	NLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLEILNGQDRVLAILDNFASKDMPGRQARIQDCVNQILAKVDPKAAAG
Ga0207699_101834001	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	QVSANRAQAASDRRAIADHETLIALHEMAKQQLEILNGQDRVLAILDNFASKDMPGRQARIQDCVNQILAKVDPKAAAG
Ga0207684_107336731	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	WPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0207663_104629751	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0207662_100065781	3300025918	Switchgrass Rhizosphere	PLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0207646_102135143	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	QVSANRALAASDRRAIADHETLIALHEMARQQLDILNGQDRVLAILDNFASRDMPGRQAHIQDCVDQILAKVDSKPAAAGA
Ga0207700_103175791	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLEILNGQDRVLAILDNFASKDMPGRQARIQDCVNQILAKVDPKAAAG
Ga0207664_103944841	3300025929	Agricultural Soil	IVGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0207664_105808191	3300025929	Agricultural Soil	NIVGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLEILNGQDRVLAILDNFASKDMPGRQARIQDCVNQILAKVDPKAAAG
Ga0207640_108632282	3300025981	Corn Rhizosphere	LNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0207677_105934081	3300026023	Miscanthus Rhizosphere	QLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0207702_106573431	3300026078	Corn Rhizosphere	SLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDQKPEGADGQVQA
Ga0207702_111700211	3300026078	Corn Rhizosphere	KTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPRPAAS
Ga0208732_10228031	3300026984	Forest Soil	KTPWPLLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDSKPAAAEG
Ga0208730_10218112	3300027047	Forest Soil	ILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRQIQDCVDQILAKVDAGPAGS
Ga0208236_10188152	3300027066	Forest Soil	PWPLLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGKQAEIQNCVNQILAKVDASPAAG
Ga0208042_11230392	3300027568	Peatlands Soil	LLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDQVLAILDNFASKDMPGRQRHIQDCVDKILARVDPGTAEG
Ga0209420_10425693	3300027648	Forest Soil	FDKTPWPLLLTILNLPQLSIMISLQVSANRSQAASDRRAIADHDTLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQTEIQNCVNQILAKVDSSPAAG
Ga0209626_12178381	3300027684	Forest Soil	WLFLGNIVGFDKTPWPLLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDQFASKDMPGRQRQIQDCVDQILAKVDARPAGS
Ga0209693_105489481	3300027855	Soil	ILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDQVLAILDNFASKDMPGRQRQIQACVDQILAKVDARPAGS
Ga0209167_107591922	3300027867	Surface Soil	DKTPWPLLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVNAEPEVG
Ga0209275_108585221	3300027884	Soil	WPLLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRQIQDCVDQILAKVDAGPAGS
Ga0209380_101122341	3300027889	Soil	ANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDAEPASS
Ga0209624_101429663	3300027895	Forest Soil	VILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDQFASKDMPGRQRQIQDCVDQILAKVDAQPAGS
Ga0209069_109983252	3300027915	Watersheds	LQVSANRAQAASDRRAIADHETLIALHEMAKQQLEILNGQDRVLAILDNFASKDMPGRQRHIQDCVDKILAKVAPEPAEG
Ga0307307_100732241	3300028718	Soil	ANRAQAASDRRAIADHETLIALHEMARQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0307282_100777711	3300028784	Soil	PWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMARQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0307312_100462211	3300028828	Soil	LNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMARQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0302229_103023892	3300028879	Palsa	LSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQNRVLAMLDNFASKDMPGKQTEIQDAVHQILTLVSHEPTAG
Ga0307304_103150232	3300028885	Soil	PLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMARQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0311340_106366492	3300029943	Palsa	PWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMSKQQLDILNGQNQVLALLDNFASKDMPGKQDKIQDCVNQILETVRPQPAAG
Ga0311371_118928721	3300029951	Palsa	KTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMSKQQLDILNGQNQVLALLDNFASKDMPGKQDKIQDCVNQILETVRPQPAAG
Ga0311339_115993741	3300029999	Palsa	PQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQNRVLAMLDNFASKDMPGKQDAIQACVDQILATVKQPPVAG
Ga0302178_103927312	3300030013	Palsa	LTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMSKQQLDILNGQNQVLALLDNFASKDMPGKQDKIQDCVNQILETVRPQPAAG
Ga0311370_104888823	3300030503	Palsa	LLTILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHQMGKQQIDILNGQNRVLAMLDNFASKDMPGKQAEMEATVHQILALVSHEPTAG
Ga0311370_107794772	3300030503	Palsa	LSIMISLQVSANRAQAASDRRAIADHETLIALHEMSKQQLDILNGQNQVLALLDNFASKDMPGKQDKIQDCVNQILETVRPQPAAG
Ga0311356_109894672	3300030617	Palsa	LGNVVGFDKTPWPLLLTILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMGKQQIDILNGQNRVLAMLDNFASKDMPGKQAEMQAAVHQILALVSHEPTAG
Ga0307482_11157152	3300030730	Hardwood Forest Soil	LLLVILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDQFASKDMPGRQRQIQDCVDQILAKVDAGPAGS
Ga0302311_103795932	3300030739	Palsa	LNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKHQLDILNGQDRVLAMLDTFASKDMPGKQNEIQACVNQILATVKQRPAAD
Ga0302325_100592108	3300031234	Palsa	VGFDKTPWPLLLTILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMGKQQIDILNGQNRVLAILDNFASKDMPGKQTEIQDAVHQILTLVSHEPTAG
Ga0302325_114150262	3300031234	Palsa	LLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMGKQQLDILNGQDRVLALLDNFASKDMPGKQNEIQACVDQILATVKQKPAAN
Ga0302324_1007698602	3300031236	Palsa	VGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQTASDKRAIADHETLIALHEMAKLQLDILRGQNQVLDILHNFASKDMPGQQQRMMETTDKILAIVGKGAATS
Ga0302324_1008574513	3300031236	Palsa	LGNVVGFDKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMSKQQLDILNGQDRVLALLDNFASKDMPGKQNEIQACVNQILATVKQKPAAN
Ga0302324_1010032291	3300031236	Palsa	QLSILISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAMLDTFASKDMPGRQNEIQACVNQILATVKQTPAAG
Ga0302326_105692994	3300031525	Palsa	TPWPLLLTILNLPQLSIMISLQVSANRAQTASDKRAIADHETLIALHEMAKLQLDILRGQNQVLDILHNFASKDMPGQQQRMMETTDKILAIVGKGAATS
Ga0302326_108774121	3300031525	Palsa	VGFDKTPWPLLLTILNLPQLSIMISLQVSANRSQAASDRRAIADHETLIALHEMGKQQIDILNGQNRVLAMLDNFASKDMPGKQAEMQAAVHQILALVSHEPTAG
Ga0310686_1064041213	3300031708	Soil	IMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDAEPAGS
Ga0310686_1066207443	3300031708	Soil	IMISLQVSANRSQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDAQPAAS
Ga0308176_103660743	3300031996	Soil	MISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLALLDNFASKDMPGRQRHIQDCVDQILAKVDAKPAAS
Ga0307470_117083112	3300032174	Hardwood Forest Soil	TILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLEILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0307472_1024984792	3300032205	Hardwood Forest Soil	ADSQVTESAQLARPETDGAALRAILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0335079_103112041	3300032783	Soil	QLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAG
Ga0335078_1001949910	3300032805	Soil	QVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVDPKPAAS
Ga0335074_103817733	3300032895	Soil	PWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVNTDPSAG
Ga0335075_109144432	3300032896	Soil	FDKTPWPLLLTILNLPQLSIMISLQVSANRAQAASDKRAIADHETLIALHEMARQQLDILHGQDRVLSALDNFASKDMPGKQQEIEQTVLQILAAVRGAAAS
Ga0335076_114349392	3300032955	Soil	KTPWPLLLTILNLPQLSIMISLQVSANRAQAASDRRAIADHETLIALHEMAKQQLDILNGQDRVLAILDNFASKDMPGRQRHIQDCVDQILAKVNAAPEAG
Ga0316214_10376491	3300033545	Roots	FDKTPWPLLLTILNLPQLSIMVSLQVSANRAQAASDGRAIADHETLISLHEMARQQIELLKGQDAVLGLLENFASKDMPGKQREILDSVQQILTVVSHEPGAASGQVKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066191

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences