Metagenome Family F066360

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Overview

Basic Information
Family ID	F066360
Family Type	Metagenome
Number of Sequences	126
Average Sequence Length	71 residues
Representative Sequence	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAIN
Number of Associated Samples	95
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	96.83 %
% of genes near scaffold ends (potentially truncated)	98.41 %
% of genes from short scaffolds (< 2000 bps)	95.24 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (99.206 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (38.095 % of family members)
Environment Ontology (ENVO)	Unclassified (44.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.444 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134 1Ga0116117_11655711 2Ga0116120_12877062 3Ga0116106_11856351 4Ga0074044_105314683 5Ga0181527_13519491 6Ga0181518_106055951 7Ga0181521_101020994 8Ga0181529_100611061 9Ga0181531_107772612 10Ga0181535_104144463 11Ga0181537_106394481 12Ga0182014_102972341 13Ga0182014_104364542 14Ga0182014_104752251 15Ga0182013_101916951 16Ga0182013_103104221 17Ga0182013_104116031 18Ga0182016_101475404 19Ga0182015_108110012 20Ga0182012_101316264 21Ga0182012_102346603 22Ga0182012_105835672 23Ga0181525_105235121 24Ga0181516_103158113 25Ga0181522_105850441 26Ga0182030_105962993 27Ga0182030_107502093 28Ga0182030_107761813 29Ga0182030_108556093 30Ga0182030_109230093 31Ga0182030_113417181 32Ga0187856_11942533 33Ga0187850_103013841 34Ga0181520_102501041 35Ga0187868_13202422 36Ga0187872_102809911 37Ga0187885_105019362 38Ga0187857_104007432 39Ga0187857_105477301 40Ga0187867_103341711 41Ga0187875_100376466 42Ga0187862_100723126 43Ga0187887_105034661 44Ga0187890_103025291 45Ga0187851_107713102 46Ga0187859_100771191 47Ga0187858_103816101 48Ga0224526_10161395 49Ga0224526_10307133 50Ga0224526_10406871 51Ga0224554_10791881 52Ga0224555_10880771 53Ga0224555_11459091 54Ga0224535_10415243 55Ga0224521_11326991 56Ga0208190_11166781 57Ga0255351_10935852 58Ga0255355_10276943 59Ga0255353_10624681 60Ga0255354_10744471 61Ga0255349_10420871 62Ga0255349_11057932 63Ga0302144_101866091 64Ga0302267_100787271 65Ga0302202_103620031 66Ga0302198_104149741 67Ga0302269_10581221 68Ga0302269_11698752 69Ga0302201_100264751 70Ga0302189_100885074 71Ga0302189_103446092 72Ga0302268_11756481 73Ga0302265_11183723 74Ga0302265_11709792 75Ga0302197_103243433 76Ga0302200_103916381 77Ga0311327_108814282 78Ga0311329_109689881 79Ga0311362_112280682 80Ga0311359_101019391 81Ga0311358_108705162 82Ga0302142_10411711 83Ga0311363_104759291 84Ga0311363_115075811 85Ga0311363_116338401 86Ga0311328_103791741 87Ga0311346_103205165 88Ga0311346_110268232 89Ga0311343_105641254 90Ga0302150_100806583 91Ga0302277_11485773 92Ga0302277_11995811 93Ga0311332_110630301 94Ga0302190_101839943 95Ga0302270_102232911 96Ga0302270_104953312 97Ga0311344_104043283 98Ga0302274_101348514 99Ga0302274_103026701 100Ga0302274_105059832 101Ga0302281_100968973 102Ga0302281_103114232 103Ga0302191_102260061 104Ga0302196_104280962 105Ga0302194_101241133 106Ga0302192_103696152 107Ga0302275_101726131 108Ga0302275_104422261 109Ga0302193_100827751 110Ga0311345_105157613 111Ga0265330_105145451 112Ga0302318_101206054 113Ga0302140_111464572 114Ga0302320_103619271 115Ga0302320_109744693 116Ga0302320_109744891 117Ga0307374_103731883 118Ga0265342_105234551 119Ga0302319_113485331 120Ga0316217_100696155 121Ga0316232_12174493 122Ga0316221_10372041 123Ga0334837_037604_1132_1401 124Ga0334837_058792_728_937 125Ga0334840_052643_337_612 126Ga0326724_0299996_698_892
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134 1Ga0116117_11655711 2Ga0116120_12877062 3Ga0181518_106055951 4Ga0181521_101020994 5Ga0181531_107772612 6Ga0182013_103104221 7Ga0182030_108556093 8Ga0182030_113417181 9Ga0224535_10415243
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134 1Ga0116117_11655711 2Ga0116120_12877062 3Ga0181518_106055951 4Ga0181521_101020994 5Ga0181531_107772612 6Ga0182013_103104221 7Ga0182030_108556093 8Ga0182030_113417181 9Ga0224535_10415243
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.38% β-sheet: 0.00% Coil/Unstructured: 44.62%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	0.79 %
Unclassified	root	N/A	99.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.21 %
Viruses	superkingdom	All Organisms → Viruses	0.79 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.79 %
Unclassified	root	N/A	99.21 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300009635\|Ga0116117_1165571	Not Available	574	Open in IMG/M
3300009641\|Ga0116120_1287706	Not Available	510	Open in IMG/M
3300009645\|Ga0116106_1185635	Not Available	662	Open in IMG/M
3300010343\|Ga0074044_10531468	Not Available	768	Open in IMG/M
3300014153\|Ga0181527_1351949	Not Available	570	Open in IMG/M
3300014156\|Ga0181518_10605595	Not Available	510	Open in IMG/M
3300014158\|Ga0181521_10102099	Not Available	1757	Open in IMG/M
3300014161\|Ga0181529_10061106	Not Available	2576	Open in IMG/M
3300014169\|Ga0181531_10777261	Not Available	597	Open in IMG/M
3300014199\|Ga0181535_10414446	Not Available	787	Open in IMG/M

Showing 1 to 10 of 126 entries

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Environmental Properties

Associated Habitat Types

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Habitat	Taxonomy	Distribution
Environmental	Environmental	98.41%
Host-Associated	Host-Associated	1.59%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	26.19%
Plants	Host-Associated → Plants	1.59%
Terrestrial	Environmental → Terrestrial	72.22%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	26.19%
Peat	Environmental → Terrestrial → Peat	57.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.59%
Soil	Environmental → Terrestrial → Soil	15.08%

Habitat	Taxonomy	Distribution
Clay	Environmental → Terrestrial → Soil → Clay	0.79%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	57.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	23.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.29%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.63%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	2.38%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	13.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	57.14%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	38.10%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	12.70%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	8.73%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.79%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.76%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	2.38%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.79%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.79%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	11.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.59%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	13.49%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.79%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 95 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0116117_11655711	3300009635	Peatland	MILTPSNTGNVAAGVGVGIFAWGAFLKADHIPWIQKLLTTKRKDATLKWIDKNKGISLLG
Ga0116120_12877062	3300009641	Peatland	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRN
Ga0116106_11856351	3300009645	Peatland	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGI
Ga0074044_105314683	3300010343	Bog Forest Soil	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDK
Ga0181527_13519491	3300014153	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINKNKGI
Ga0181518_106055951	3300014156	Bog	MADFTPVSTGEGKAVLFMLLTPSNSGNLAAGAGLGIFAWGAFLKADKIPFLKKFLTTRRKEVTLGWMNRNKGMSLLGLETVNFGIHGITNPNSVMFA
Ga0181521_101020994	3300014158	Bog	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETINFGIHGITNPNSVMFAL
Ga0181529_100611061	3300014161	Bog	MLLTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTAKRKDATLKWIDKNKGISLLGLETVNFG
Ga0181531_107772612	3300014169	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINKNKGISLLGLEAINLGIHGILSANAVIFAL
Ga0181535_104144463	3300014199	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDKNKGISLLGLE
Ga0181537_106394481	3300014201	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIHGILSANAVMFALGNTILNI
Ga0182014_102972341	3300014491	Bog	MAGFTSVSTGEGKAVLFMLLTPSNSGNLAAGAGLGIFAWGAFLKADKIPFIKKLMPTGRKETTLSWMNRNKGMSLLGLETVNFGIHGI
Ga0182014_104364542	3300014491	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEFTLDWIDRNKGISLLGLETINLGIHGILSANAVIF
Ga0182014_104752251	3300014491	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDRNKGISLLGLEAINLGIHGILSANAVIFALGNTLLNI
Ga0182013_101916951	3300014492	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIH
Ga0182013_103104221	3300014492	Bog	LILTPSNSGNLVAGAGLGIFAWGAFLKADKIPFIKKLLTTRRKEGTLSWINQNKGITLLGLETINLG
Ga0182013_104116031	3300014492	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDKNKGISLLG
Ga0182016_101475404	3300014493	Bog	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETINFGIHGIT
Ga0182015_108110012	3300014495	Palsa	MILTPSNTGNLVAGAGLGIFAWSAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLL
Ga0182012_101316264	3300014499	Bog	LILTPSNSGNLVAGAGLGIFAWGAFLKADKIPFIKKLLTTRRKERTLEWINRNKGVSLLGLETINLGIHGIVSANA
Ga0182012_102346603	3300014499	Bog	LILTPSNSGNLVAGAGLGIFAWGAFFKADKIPFIKKLLTTRRKERTLEWINRNKGVSLLGLETINLGIHGIVSANA
Ga0182012_105835672	3300014499	Bog	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETVNFGIHGITNPNSVMFALGNTILNIFM
Ga0181525_105235121	3300014654	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKIPWFKRLMTARRKELSLDWINRNKGISLLGLEAVNLGIHGILSANAVIFALGNTILNIFML
Ga0181516_103158113	3300014655	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLTTTRRKELSLDWI
Ga0181522_105850441	3300014657	Bog	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNK
Ga0182030_105962993	3300014838	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIHGILSANAVIFALGNTILNIFML
Ga0182030_107502093	3300014838	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDKNKGISLLGLETINLGIHGILSANAVIFALG
Ga0182030_107761813	3300014838	Bog	LILTPSNSGNLVAGAGLGIFAWGAFLKADKIPFIKKLLTTRRKERTLEWINRNKGVSLLGLETINLGIHGIVS
Ga0182030_108556093	3300014838	Bog	MILTPSNSGNLVAGAGLGIFAWGALLKADHIPWVQKLLTTKRKNATLNWVN
Ga0182030_109230093	3300014838	Bog	MVITPSNSGNLVAGAGLGIFAWSAFLKADKIPWIRKLLTTRRKEMTLDWIDKNK
Ga0182030_113417181	3300014838	Bog	MVITPSNSGNLIAGAGLGVFAWSAFLKADRIPWLKNLLTTRRKEMTLDWMDKNKGISLLGLETINL
Ga0187856_11942533	3300017925	Peatland	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKNATLKWIDKNKGIRL
Ga0187850_103013841	3300017941	Peatland	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIHGILSANAVIFALGNTM
Ga0181520_102501041	3300017988	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLG
Ga0187868_13202422	3300018002	Peatland	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLET
Ga0187872_102809911	3300018017	Peatland	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLRWIDKNKGISLLGLETINFGI
Ga0187885_105019362	3300018025	Peatland	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWID
Ga0187857_104007432	3300018026	Peatland	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETINFGIH
Ga0187857_105477301	3300018026	Peatland	MAGFTSVSTGEGKAVLFMLLTPSNSGNLAAGAGLGIFAWGAFLKADKIPFIKKLMPTGRKETTLSWMNRNKGMSLLGLETVNFGIHGITNPNSVMFALGNTILNIFM
Ga0187867_103341711	3300018033	Peatland	MILTPSNTGNVAAGVGVGIFAWGAFLKADKMPWIQKLLTTKRKDATL
Ga0187875_100376466	3300018035	Peatland	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETVNFGIHGITNPNSVMFALGNTI
Ga0187862_100723126	3300018040	Peatland	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETINFGIHGITNPNSVMFALGNTILNIF
Ga0187887_105034661	3300018043	Peatland	MILTPSNTGNLVAGAGLGIFAWSAFLKADKVPWLKKLMTTRRKDLSLDWINRNKGISLLG
Ga0187890_103025291	3300018044	Peatland	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINKNKGISLLG
Ga0187851_107713102	3300018046	Peatland	MILTPSNTGNLVAGAGLGIFAWSAFLKADKVPWLKKLMTTRRKDLSLDWINRNKGISLLGLEAINLGIHGILSANAVIF
Ga0187859_100771191	3300018047	Peatland	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLNWIDKNKGISLLGLETVNFGIHGITNPNS
Ga0187858_103816101	3300018057	Peatland	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLL
Ga0224526_10161395	3300022872	Soil	MLLTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETVNFGIHGITEANSVMFALGNTL
Ga0224526_10307133	3300022872	Soil	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKDLSLDWIN
Ga0224526_10406871	3300022872	Soil	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMT
Ga0224554_10791881	3300023068	Soil	MAGFTSVSTGEGKAVLFMLLTPSNSGNLAAGAGLGIFAWGAFLKADKIPFIKKLMPTGRKETTLSWMNRNKGMSLLGLETVNFGIHGITNPNSVMFALGNTILNI
Ga0224555_10880771	3300023088	Soil	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETINFGIHGITEANSVMFALGNT
Ga0224555_11459091	3300023088	Soil	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDKNKGISLL
Ga0224535_10415243	3300023258	Soil	MVITPTNSGSLLAGAGLGFFAWGAFLKADKVPWLKVLLTTRRKDETLAWVNKNRGLSLLGLESVNYGIHGILDPNSVFFALGNTVVNLLFLWIFLPFRIARAAKKRQRDVLKGVA
Ga0224521_11326991	3300024233	Soil	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLK
Ga0208190_11166781	3300025473	Peatland	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIHGILSANAVIFA
Ga0255351_10935852	3300026456	Soil	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKN
Ga0255355_10276943	3300028068	Soil	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDRNKGISLLG
Ga0255353_10624681	3300028070	Soil	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDKNKGISLLGLETINLGIHGILSANAVIFALGNTLL
Ga0255354_10744471	3300028087	Soil	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDKNKGIS
Ga0255349_10420871	3300028090	Soil	MLLTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETVNFSIHGVTEA
Ga0255349_11057932	3300028090	Soil	MVITPSNSGNLVAGAGLGIFAWSAFLKADKIPWIRKLLTTMRKEMTLDWIDKNKGISL
Ga0302144_101866091	3300028560	Bog	MVITPSNSGNLVAGAGLGIFAWSAFLKADKIPWIRKLLTTRRKEMTLDWIDKNKGISLLGLETI
Ga0302267_100787271	3300028745	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEFTLDWIDRNKGISLLGLEAINLGIHGILSANAVIFALGNT
Ga0302202_103620031	3300028762	Bog	MVITPSNSGNLVAGAGLGIFAWSAFLKADKIPWLRNLLTTRRKEMTLDWIDKNKGISLLGLETINLGIHGILSANAVIFALGNTAFN
Ga0302198_104149741	3300028765	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDKNKGI
Ga0302269_10581221	3300028766	Bog	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETVNFSIHGVTEANSVFFALGNTLLNV
Ga0302269_11698752	3300028766	Bog	MVITPTNSGSLLAGAGLGFFAWGAFLKADKVPWLKVLLTTRRKDETLAWVNKNRGLSLLGLESVNYGIHGILDPNSVFFALGNTVVNLLFLWI
Ga0302201_100264751	3300028785	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKVPWLKKLMTTRRKELSLDWINKNKGISLLGLEAINLGIHGILSANAVIFALGNT
Ga0302189_100885074	3300028788	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDRNK
Ga0302189_103446092	3300028788	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEFTLDWIDRNKGISLLGLEAINLGIHGILSANAVIF
Ga0302268_11756481	3300028854	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKDLSLDWINRNKGISLLGLEAI
Ga0302265_11183723	3300028859	Bog	LILTPSNSGNLVAGAGLGIFAWGAFLKADKIPFIKKLLTTRRKERTLEWINRNKGVSLLG
Ga0302265_11709792	3300028859	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIHGILSANAVIFALGN
Ga0302197_103243433	3300028873	Bog	LILTPSNSGNLVAGAGLGIFAWGAFLKADKIPFIKKLLTTRRKEGTLSWINQNKGITLLG
Ga0302200_103916381	3300028909	Bog	MVITPTNSGSLLAGAGLGFFAWGAFLKADKVPWLKVLLTTRRKDETLAWVNKNRGLSLLGLESVNYGIHGILDPNSVFFALGNTVVNLLFLWIFLPF
Ga0311327_108814282	3300029883	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWIKKLMTTRRKELSLDWINRN
Ga0311329_109689881	3300029907	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIHGILSANAVIFAL
Ga0311362_112280682	3300029913	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGVSLLGLEAINLGIHGILSANAVIFAL
Ga0311359_101019391	3300029914	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRCKEMTLDWIDKNKGISLLGLETINLG
Ga0311358_108705162	3300029915	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIHGILSANAVIFALGNT
Ga0302142_10411711	3300029920	Bog	MILTPSNTGNLIAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGMEAIN
Ga0311363_104759291	3300029922	Fen	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRCKEMTLDWIDKNKGISLLGLETINLGIHGILSANAVIFALG
Ga0311363_115075811	3300029922	Fen	MVITPSNSGNLVAGAGLGIFAWGAFLKADKIPWLKRLLTTRRKEDTLEWIYKNKSLSLLGLEAINFGIHGILSA
Ga0311363_116338401	3300029922	Fen	MVITPSNSGNVVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDKN
Ga0311328_103791741	3300029939	Bog	MILTPTNTGSLAAGVGVGIFGWGAFLKADKIPWIQKLLTTKRKESTLNWISKNKGITL
Ga0311346_103205165	3300029952	Bog	MLLTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGIS
Ga0311346_110268232	3300029952	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLG
Ga0311343_105641254	3300029953	Bog	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLG
Ga0302150_100806583	3300029956	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDRN
Ga0302277_11485773	3300029982	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDRNKGISLLGLEAINLG
Ga0302277_11995811	3300029982	Bog	MILTPTNTGSLAAGVGVGIFGWGAFLKADKIPWIQKLLTTKRKESTLNWISKNKGITLLGLETINFGI
Ga0311332_110630301	3300029984	Fen	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETINFGIHGITEANSVMFALGNTLLN
Ga0302190_101839943	3300029988	Bog	MILTPTNTGSLAAGVGVGIFGWGAFLKADKIPWIQKLLTTKRKESTLNWISKNKGITLLG
Ga0302270_102232911	3300030011	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEFTLDWIDRNKGISLLGLEAINLGIHGILSAN
Ga0302270_104953312	3300030011	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGVSLLGLEAINLGIHGILSANAVIFALGNTILNI
Ga0311344_104043283	3300030020	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIHGILSANAVIFALGNTFLNI
Ga0302274_101348514	3300030041	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIHGILSANAVIFALGNTI
Ga0302274_103026701	3300030041	Bog	LILTPSNSGNLVAGAGLGIFAWSAFLKSDKIPFLKKLLTTRRKERTLSWVNQNKGITLLGLETINLGIHGIVSANAVIFALGNTILNI
Ga0302274_105059832	3300030041	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKDLSLDWINRNKGISLLGLEAINLGIHG
Ga0302281_100968973	3300030044	Fen	LILTPSNSGNLVAGAGLGIFAWGAFLKADKIPFIKKLLTTRRKERTLEWINRNKGVSLLGLET
Ga0302281_103114232	3300030044	Fen	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEFTLDWIDRNKGISLLGLEAINLGIH
Ga0302191_102260061	3300030049	Bog	MILTPSNTGNLVAGAGVGIFAWGALLKADHIPWVQKLLTTKRKNATLNWVNKNKSITLL
Ga0302196_104280962	3300030225	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIHGILSANAVIFALGNTIL
Ga0302194_101241133	3300030506	Bog	MILTPTNTGSLAAGVGVGIFGWGAFLKADKIPWIQKLLTTKRKESTLNWISKNKGITLLGLETINFGIHGITSANSVMLALGNTLLNIFM
Ga0302192_103696152	3300030507	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKDLSLDWINRNKGISLLGLEAINLGIHGILSANAV
Ga0302275_101726131	3300030518	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAIN
Ga0302275_104422261	3300030518	Bog	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWINRNKGVSLLGLEAINLGIHGILSANAVIFALGNTILNIFM
Ga0302193_100827751	3300030519	Bog	MILTPTNTGSLAAGVGVGIFGWGAFLKADKIPWIQKLLTTKRKESTLNWISKNKGITLLGLETINFGIHGI
Ga0311345_105157613	3300030688	Bog	LILTPSNSGNLVAGAGLGIFAWGAFLKADKIPFIKKLLTTRRKEGTLSWINQNKGITLLGLE
Ga0265330_105145451	3300031235	Rhizosphere	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEFTLDWI
Ga0302318_101206054	3300031258	Bog	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETINFGIHGITKANSVMFALGNTLLNVL
Ga0302140_111464572	3300031261	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKVPLLKKLMTTRRKELSLD
Ga0302320_103619271	3300031524	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIHGILSANAVI
Ga0302320_109744693	3300031524	Bog	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETVN
Ga0302320_109744891	3300031524	Bog	MLLTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETVN
Ga0307374_103731883	3300031670	Soil	MILTPSNTGNLVAGAGLGIFAWGAFLKADKVPWLKKLMTTRRKELSLDWI
Ga0265342_105234551	3300031712	Rhizosphere	MIFTPSNSGNLVAGAGIGVFAWGAFLKADEIPFVKKLLTTKRKETTLTWINLNKGISLLGLEAINF
Ga0302319_113485331	3300031788	Bog	MILTPSNTGNLVAGAGLGIFAWSAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIHGILSANA
Ga0316217_100696155	3300031813	Freshwater	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWI
Ga0316232_12174493	3300032605	Freshwater	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGIS
Ga0316221_10372041	3300032665	Freshwater	MILTPSNTGNLVAGTGLGIFAWSAFLKADKVPWLKKLMTTRRKELSLDWINRNKGISLLGLEAINLGIHGILSANAVIFALGN
Ga0334837_037604_1132_1401	3300033823	Soil	MILTPSNTGNLFAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEMTLDWIDKNKGISLLGLETINLGIHGILSANAVIFALGNTLLNIFM
Ga0334837_058792_728_937	3300033823	Soil	MILTPSNTGNLVAGAGLGIFAWSAFLKADKIPWLKNLLTTRRKEFTLDWIDRNKGISLLGLETINLGIHG
Ga0334840_052643_337_612	3300033824	Soil	MILTPSNTGNVAAGVGVGIFAWGAFLKADKIPWIQKLLTTKRKDATLKWIDKNKGISLLGLETINFGIHGITEANSVMFALGFGSTYLSGG
Ga0326724_0299996_698_892	3300034091	Peat Soil	MILTPSNTGNLVAGAGLGIFAWSAFLKADKVPWLKKLMTTKRKELSLDWINRNKGISLLGLEAIN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F066360

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences