Metagenome / Metatranscriptome Family F066551

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066551
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	73 residues
Representative Sequence	VPDQDTAAGAAKRRLLSPADNPLVRAVGRVPAGVHAKLLVAFVGTALLVVVLGVLGLRLLGQSNERVETLGT
Number of Associated Samples	107
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.26 %
% of genes near scaffold ends (potentially truncated)	95.24 %
% of genes from short scaffolds (< 2000 bps)	94.44 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.825 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.079 % of family members)
Environment Ontology (ENVO)	Unclassified (36.508 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.317 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF13577	SnoaL_4	80.16
PF00072	Response_reg	3.97
PF00196	GerE	3.17
PF01259	SAICAR_synt	0.79
PF07883	Cupin_2	0.79
PF16177	ACAS_N	0.79
PF12680	SnoaL_2	0.79
PF00656	Peptidase_C14	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0152	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Nucleotide transport and metabolism [F]	0.79
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.83 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.83 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.83 %
Unclassified	root	N/A	3.17 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.68 %
Unclassified	root	N/A	3.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.59 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.89 %
Unclassified	root	N/A	3.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.59 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	87.30 %
Unclassified	root	N/A	3.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.59 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	85.71 %
Unclassified	root	N/A	3.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	85.71 %
Unclassified	root	N/A	3.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000953\|JGI11615J12901_14335406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300002239\|JGI24034J26672_10056790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300003324\|soilH2_10249382	All Organisms → cellular organisms → Bacteria	1622	Open in IMG/M
3300003324\|soilH2_10316109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1206	Open in IMG/M
3300003324\|soilH2_10330090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1004	Open in IMG/M
3300004153\|Ga0063455_100538154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	740	Open in IMG/M
3300004156\|Ga0062589_102737340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300004157\|Ga0062590_101155058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	751	Open in IMG/M
3300005186\|Ga0066676_10666839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300005327\|Ga0070658_11240509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	648	Open in IMG/M
3300005328\|Ga0070676_10694586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300005337\|Ga0070682_101049873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	679	Open in IMG/M
3300005338\|Ga0068868_101396684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300005341\|Ga0070691_10794783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300005343\|Ga0070687_101154740	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300005343\|Ga0070687_101356697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	530	Open in IMG/M
3300005344\|Ga0070661_100642461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	861	Open in IMG/M
3300005344\|Ga0070661_100645606	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005347\|Ga0070668_101874546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300005365\|Ga0070688_101631487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	527	Open in IMG/M
3300005445\|Ga0070708_101260802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300005455\|Ga0070663_101825925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300005530\|Ga0070679_101634490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300005536\|Ga0070697_100607104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	962	Open in IMG/M
3300005543\|Ga0070672_101747446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300005544\|Ga0070686_101762764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300005546\|Ga0070696_101166680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300005549\|Ga0070704_101504449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	619	Open in IMG/M
3300005564\|Ga0070664_101273463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300005578\|Ga0068854_101984027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300005615\|Ga0070702_100853415	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300005616\|Ga0068852_101311262	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300005618\|Ga0068864_100532884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1133	Open in IMG/M
3300005764\|Ga0066903_106077842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300006844\|Ga0075428_100555572	All Organisms → cellular organisms → Bacteria	1227	Open in IMG/M
3300006844\|Ga0075428_101865235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300006881\|Ga0068865_100655680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	892	Open in IMG/M
3300006881\|Ga0068865_101588082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	588	Open in IMG/M
3300006904\|Ga0075424_100759036	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300009098\|Ga0105245_11711208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300009098\|Ga0105245_12437013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300009100\|Ga0075418_10203590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2108	Open in IMG/M
3300009148\|Ga0105243_10159466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1944	Open in IMG/M
3300009156\|Ga0111538_12947428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300009162\|Ga0075423_13040605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300009177\|Ga0105248_10046246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4878	Open in IMG/M
3300009177\|Ga0105248_13210905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	520	Open in IMG/M
3300009177\|Ga0105248_13461802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300009545\|Ga0105237_10881436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300009545\|Ga0105237_11635273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300009792\|Ga0126374_10692646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300010358\|Ga0126370_11523738	All Organisms → cellular organisms → Bacteria → Terrabacteria group	636	Open in IMG/M
3300010371\|Ga0134125_11531672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	726	Open in IMG/M
3300010371\|Ga0134125_11635557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300010400\|Ga0134122_11333012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300010403\|Ga0134123_12185859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	615	Open in IMG/M
3300010999\|Ga0138505_100057182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300012022\|Ga0120191_10008159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1228	Open in IMG/M
3300012896\|Ga0157303_10256374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300012897\|Ga0157285_10167349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	667	Open in IMG/M
3300012903\|Ga0157289_10296588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300012907\|Ga0157283_10270900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300012951\|Ga0164300_10097586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1282	Open in IMG/M
3300012958\|Ga0164299_10387706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	893	Open in IMG/M
3300012958\|Ga0164299_10873313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	650	Open in IMG/M
3300012958\|Ga0164299_11433351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300012960\|Ga0164301_11246732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300012960\|Ga0164301_11577735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300012984\|Ga0164309_10173165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1459	Open in IMG/M
3300012984\|Ga0164309_11210353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300012987\|Ga0164307_11173807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300013296\|Ga0157374_11572070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	681	Open in IMG/M
3300013308\|Ga0157375_10228300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2020	Open in IMG/M
3300013308\|Ga0157375_11972116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300014325\|Ga0163163_10621599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1144	Open in IMG/M
3300014745\|Ga0157377_10622509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	773	Open in IMG/M
3300014969\|Ga0157376_13081156	Not Available	505	Open in IMG/M
3300015201\|Ga0173478_10189932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	853	Open in IMG/M
3300015201\|Ga0173478_10424644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300015371\|Ga0132258_10257810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4267	Open in IMG/M
3300015372\|Ga0132256_101011631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	946	Open in IMG/M
3300015374\|Ga0132255_101696620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300018052\|Ga0184638_1014578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2712	Open in IMG/M
3300018081\|Ga0184625_10346945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300019356\|Ga0173481_10093109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1142	Open in IMG/M
3300021445\|Ga0182009_10671774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300022901\|Ga0247788_1087807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300023077\|Ga0247802_1030411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	797	Open in IMG/M
3300024055\|Ga0247794_10260609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300025893\|Ga0207682_10428856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	625	Open in IMG/M
3300025901\|Ga0207688_10527876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300025904\|Ga0207647_10465946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300025911\|Ga0207654_10411484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	942	Open in IMG/M
3300025920\|Ga0207649_10718343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	776	Open in IMG/M
3300025922\|Ga0207646_10610048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	979	Open in IMG/M
3300025923\|Ga0207681_10332347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1212	Open in IMG/M
3300025927\|Ga0207687_10588525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	937	Open in IMG/M
3300025935\|Ga0207709_10162025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1561	Open in IMG/M
3300025937\|Ga0207669_11141358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300025940\|Ga0207691_10710219	Not Available	847	Open in IMG/M
3300025944\|Ga0207661_10163114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1935	Open in IMG/M
3300025961\|Ga0207712_10777709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300025981\|Ga0207640_11156974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300026023\|Ga0207677_11306384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300026067\|Ga0207678_10369097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1239	Open in IMG/M
3300026075\|Ga0207708_11652309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300026089\|Ga0207648_11967746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300026095\|Ga0207676_12180205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300026142\|Ga0207698_12519191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300027378\|Ga0209981_1070645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300027880\|Ga0209481_10301970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300028380\|Ga0268265_10512722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1132	Open in IMG/M
3300028828\|Ga0307312_10323727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1006	Open in IMG/M
3300028875\|Ga0307289_10430799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300031562\|Ga0310886_10428110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300031995\|Ga0307409_101943573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300032075\|Ga0310890_10364456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1061	Open in IMG/M
3300032122\|Ga0310895_10084765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1256	Open in IMG/M
3300034659\|Ga0314780_116435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300034662\|Ga0314783_036886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	870	Open in IMG/M
3300034663\|Ga0314784_078724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300034664\|Ga0314786_050372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300034665\|Ga0314787_037119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	762	Open in IMG/M
3300034665\|Ga0314787_041335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	733	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.38%
Host-Associated	Host-Associated	47.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.79%
Plants	Host-Associated → Plants	47.62%
Aquatic	Environmental → Aquatic	1.59%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.08%
Sediment	Environmental → Aquatic → Sediment	1.59%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.79%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.84%
Loam	Environmental → Terrestrial → Soil → Loam	13.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.49%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.59%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.35%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.17%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.38%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.38%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.59%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034664	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034665	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11615J12901_143354062	3300000953	Soil	MHDQERAAGETSRRLLSPADHPLVLAVARVPAGVHIKLLVAFVGTALLVVGVGLLGLRLLGQSNDRVATLGTLQERAFAYGKLRSDALHT
JGI24034J26672_100567902	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	VSANVPQQGPTAGAATRRLLTPADNPLVRAVGRIPAGVHAKLLVAFGGVALLVVVLGALGLRLL
soilH2_102493824	3300003324	Sugarcane Root And Bulk Soil	MEEAGPRRDAAVGAPRRRLVSAADNLLVRAVGRVPAGVNAKLLVAFVCTALLVVVVGVLGLRLLGDSNQRVETLGALQARAFAYGKL
soilH2_103161091	3300003324	Sugarcane Root And Bulk Soil	VGDAAAGVSGRRRLRSADNPLVRAVARVPAGVHAKLLVAFVATALVVVVVGVLGLRLLGESN
soilH2_103300902	3300003324	Sugarcane Root And Bulk Soil	LSQELIPYQGAGASKRRLLSPADNQLVRAVGRVPAGVHVKLLVAFVGTALLVVVVGVLGLRILGQSNERVETLRTLQVRAFAYG
Ga0063455_1005381541	3300004153	Soil	VSTDSVAHQDTAAGASKRRLLSPARDPLVRAVGRVPAGVHAKLLVAFVATALLVVVVAVLGLRLL
Ga0062589_1027373401	3300004156	Soil	LSLAHRPPQETGAGAARRRLLSPADNPLVQAVGRLPAGVHAKLLVAFVGTVLLVVVLGVLGLRLLGQSNERVETLGTL
Ga0062590_1011550582	3300004157	Soil	MPQQGETLGEAKRRRLSRADNPLVRAVARLPARVHVKLLVAFVGTALLVVGVGLLGLRLLGQANERVETIG
Ga0066676_106668392	3300005186	Soil	MPQPKRAAGQTKRRLLSSADNPLVRTVARLPAGVHVKLLVAFVGTALLVVGVGLLGLRLLGQSNERVVTLGTLQDRA
Ga0070658_112405091	3300005327	Corn Rhizosphere	MPQERAARQTRWRLLSSADHPLVRAVARFPAGVHLKLLVAFVGTAVLMVGVGLLGLRLLGQANQRVETLGTLQER
Ga0070676_106945861	3300005328	Miscanthus Rhizosphere	VSADSVAHPEPAAGAPKRRLLSPAGDPFVRAVGRIPAGVHAKLLVAFVGTALLVVVVAVLGLRLL
Ga0070682_1010498732	3300005337	Corn Rhizosphere	VSFGHPPRQETAVGAKQRRLLSPADNPLVRAVGRLPAGVHAKLLVAFVSTTLLVVVLGVLGLRLLGQSN
Ga0068868_1013966842	3300005338	Miscanthus Rhizosphere	VHQDAAAAAPKRRLLSPAGDPLVRAVGRVPAGVHAKLLVAFVGTAMLVVAVAVLGLRLLGQSNERVEKLGTLQ
Ga0070691_107947832	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VSADSVAHQDAAAGTPKRRLLSPAGDPLVRAVGRIPAGVHAKLLVAFVGTALLVVVVAVLGLRLLGQANERVDSLGT
Ga0070687_1011547402	3300005343	Switchgrass Rhizosphere	MPQERAAGQTRRRLLSSADNPLVRAVARLPAGVHLKLLIAFVGTALLVVGVGILGLRLLGQANERVETLGTLQERAF
Ga0070687_1013566971	3300005343	Switchgrass Rhizosphere	MQDQERAAGETSRRLLSPADHPLVLAVARVPAGVHIKLLVAFVGTALLVVGVGLLGLRLLGQSNDRVATLGPLQERAFAYGKLRSDALHTR
Ga0070661_1006424612	3300005344	Corn Rhizosphere	MPQERAARLLSSADHPLVRAVARFPAGVHLKLLVAFVGTAVLMVGVGLLGLRLLGQANQRVETLGTLQERAFAYGKL
Ga0070661_1006456061	3300005344	Corn Rhizosphere	VLQEDRAAVQTKRRWLRPGDDPLVRAVARVPARVHVKLLVAFVGTALLVVGVGLLGLRLLGQSNERVETVGKLQ
Ga0070668_1018745461	3300005347	Switchgrass Rhizosphere	VSFGHPPRQETAAGAKQRRLLSPADNPLVRAVGRLFAGVHAKLLVAFVSTTLLVVVLGVLGLRLLG
Ga0070688_1016314871	3300005365	Switchgrass Rhizosphere	VSADSVAHQDAAAGTPKRRLLSPAGDPLVRAVGRIPAGVHAKLLVAFVGTALLVVVVAVLGLRLLGQSNERVDSL
Ga0070708_1012608021	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSQEAIPREETAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVGTALLVVVLGVLGLRLIGQSNQRVETLGTLQVRAFAYGKL
Ga0070663_1018259252	3300005455	Corn Rhizosphere	VSRARLPQQTTAADAPPRRLLSRADNPLVRAVARVPAGVHAKLLVAFLGTAVLMVVLGALGLRLFGQ
Ga0070679_1016344901	3300005530	Corn Rhizosphere	LSAESAPQQDPAAGAAKPRLPKPADNLLVRTVGRVPAGVRVKLLVAFVGTALLVVVLGVLGL
Ga0070697_1006071042	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LSAESAPQQDPAAGAAKPRLPKPADNLLVRTVGRVPAGVRVKLLVAFVGTALLVVVLGVLGLRLLG
Ga0070672_1017474462	3300005543	Miscanthus Rhizosphere	VSADSVAHQDAAAGAPKRRLLSPAGDPLVRAVGRIPAGVHAKLLVAFVGTALLVVVVAVLGLRLLGQSNERVDSLGTLQARA
Ga0070686_1017627641	3300005544	Switchgrass Rhizosphere	VSADSVAHQDAAAGTPKRRLLSPAGDPLVRAVGRIPAGVHAKLLVAFVGTALLVVVVAVLGLRLLGQSNERVDSLGTLQARAAAY
Ga0070696_1011666802	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VSQEGVPQQDTAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVGTALLVVVLGVLGL
Ga0070704_1015044492	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRKQERAGETRRRLLSSADHPLVRAVARLPAGVHAKLLVAFVGTALLMVGVGLLGLRLL
Ga0070664_1012734631	3300005564	Corn Rhizosphere	LQEAVSHQDTAAGASKRRLLSPADNPLVRVVGRLPAGVHVKLLVAFVGTALLVVVLGVLGLRLLGQSNERMEKLGTLQARA
Ga0068854_1019840271	3300005578	Corn Rhizosphere	VSADSVAHPEPAAGAPKRRLLSPAGDPFVRAVGRIPAGVHAKLLVAFVGTALLVVVVAVLGLRLLGQTN
Ga0070702_1008534151	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VLQEDRAAVQTKRRWLRPGDDPLVRAVARVPARVHVKLLVAFVGTALLVVGVGLLGLRLLGQSNERVETVGKLQER
Ga0068852_1013112622	3300005616	Corn Rhizosphere	LSAESAPQQDPAAGAAKPRLPKPADNLLVRTVGRVPAGVRVKLLVAFVGTALLVVVLGVLGLRLLGQSNERLETLGKLQVRAF
Ga0068864_1005328843	3300005618	Switchgrass Rhizosphere	MQEQDRAAGETNRRLLSPADHPLVLAVARVPAGVHIKLLVAFVGTALLVVGVGLLGLRLLGQSNDRVATLGTLQERAFAYGKLRSDALHT
Ga0066903_1060778422	3300005764	Tropical Forest Soil	LQEALAQRDTAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVGTALLVVVLGVLGLRLLGQSNDRMEKL
Ga0075428_1005555723	3300006844	Populus Rhizosphere	VPQDETTAGATQRGLLTPADNPLVRAVGRLPAGVHVKLLVAFVGTALLVVVLGALGLRLLGQSNER
Ga0075428_1018652351	3300006844	Populus Rhizosphere	LSQGSVSEHDAAATGSKRRLLSPADNPLVRAVGRLPAGVHAKLLVAFVGTALLVVVLGVLGLR
Ga0068865_1006556801	3300006881	Miscanthus Rhizosphere	VSQEAVSQQDTAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVGTALLVVVLGVLGLRLIGQSNQR
Ga0068865_1015880822	3300006881	Miscanthus Rhizosphere	VSEGHASAHLEGAAEPGKRRLLSPADNPVVRAVGRVPTGVHVKLLVAFVGTALLVVVFAVLGLRLLGQSNERMATL
Ga0075424_1007590363	3300006904	Populus Rhizosphere	LSEQAVPRQDTAAGGSKRRLLSTAENPLVRAVGRMPAGVHVKLLVAFVGTALLVVVVAVLGLRLLGQSNERV
Ga0105245_117112081	3300009098	Miscanthus Rhizosphere	VSQEAVPQQNTAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVSTALLVVVVGVLGLRLLGQSNERVEALGTLQT
Ga0105245_124370131	3300009098	Miscanthus Rhizosphere	LKRRLLSGAGNPVVRAVGRAPAGVHAKLLVAFVGTALLVVVVGVLGLRILGESNERVETLGKLQDRAFAYGK
Ga0075418_102035901	3300009100	Populus Rhizosphere	MQDQERAAGEISRRLLSPADHPLVLAVARVPAGVHIKLLVAFVGTALLVVGVGLLGLRLLGQSN
Ga0105243_101594664	3300009148	Miscanthus Rhizosphere	MPQERAARQTRWRLLSSADHPLVRAVARFPAGVHLKLLVAFVGTAVLMVGVGLLGLRLLGQANQRVETLGTLQERAF
Ga0111538_129474282	3300009156	Populus Rhizosphere	VPQVTTAAGAARRRLLSPADNRFVRAVGRLPAGVHAKLLVAFVGTALLVIVLGVLGLRLLGQSNERVE
Ga0075423_130406052	3300009162	Populus Rhizosphere	MPQERAARQTRWRLLSSADHPLVRAVARFPAGVHLKLLVAFVGTAVLMVGVGLLGLRLLGQANQRVETLGTL
Ga0105248_100462461	3300009177	Switchgrass Rhizosphere	LSAESAPQQDPAAGAAKPRLPKPADNLLVRTVGRVPAGVRVKLLVAFVGTALLVVVLGVLGLRLLGQSNERLETLGKL
Ga0105248_132109051	3300009177	Switchgrass Rhizosphere	LSAESVPQQDAAAGATKRRRLKPAENPLVRAVGRVPAGVRVKLLVAFVGTALLVVVLGVLGLRLLGQSNERVETLGTLQ
Ga0105248_134618022	3300009177	Switchgrass Rhizosphere	VSQEAVSQQDTAAGASKRRLLSPADNPLVRAVGRVPAGVRVKLLVAFVGTALLVVVLGVLGLRLLGQSNERLETL
Ga0105237_108814361	3300009545	Corn Rhizosphere	VSADSVAHPEPAAGAPKRRLLSPAGDPFVRAVGRIPAGVHAKLLVAFVGTALLVVVVAVLGLRLLGQTNERVET
Ga0105237_116352732	3300009545	Corn Rhizosphere	MPQERAARQTRWRLLSSADHPLVRAVARFPAGVHLKLLVAFVGTAVLMVGVGLLGLRLLG
Ga0126374_106926463	3300009792	Tropical Forest Soil	VSRARVPQQETAAGATERRLLSRADNPLVRAVARLPAGVHAKLLVAFLGTALLMVVLGALGLRLFGQSNERVETLGT
Ga0126370_115237382	3300010358	Tropical Forest Soil	VSEAPPAPSRWAAVSDRRRLLSAGDNPVVRAVGRLPLRVHTKMLVAFVGTALLVVVVGLLGLRELAQAND
Ga0134125_115316722	3300010371	Terrestrial Soil	LTAESVPQQDAAAGASTRRLLKPAENPLVRAVGRVPAGVRVKLLVAFVGTALLVVVLGVLGLRLLGQSN
Ga0134125_116355571	3300010371	Terrestrial Soil	MPQERAAGQTRRRLLSSADNPLVRAVARLPAGVHLKLLIAFVGTALLVVGVGILGLRLLGQANQRVETLGTLQERAFAYGKL
Ga0134122_113330121	3300010400	Terrestrial Soil	VSQEGVPQQDTAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVGTALLVVVLGVLGLRLLGESNK
Ga0134123_121858591	3300010403	Terrestrial Soil	VPQGKAAAGTTHRRLLSRADNPLVRAVGRLPAGVHAKLLVAFLGTALLMVILGALGLRLFGQSNE
Ga0138505_1000571821	3300010999	Soil	MKRRWLSPGDDPLVRAVARLPARVHVKLLVAFVSTALLVVGVSLLGLRLLGQSNERVATL
Ga0120191_100081591	3300012022	Terrestrial	VPRQEGAAGQTKRRLLSPADNPPGRTVGRVPAGVHVKLLVAFVGTALLVVGVGLLGLRLPR*
Ga0157303_102563742	3300012896	Soil	MPQQGETLGEAKRRRLSRADNPLVRAVARLPARVHVKLLVAFVGTALLVVGVGLLGLRLLGQANERVETIGTLQDRAFGYG
Ga0157285_101673491	3300012897	Soil	VSQEAVPQQDIAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVGTALLVVVLGVLGLRLIGQSNQRV
Ga0157289_102965881	3300012903	Soil	VRQQTTAAGAPRRRLLSPADNTLVRAVGRLPAGVHAKLLVAFVGTVLLVIVLGVLGLRLLGQSN
Ga0157283_102709001	3300012907	Soil	VDLEVPQTGTDAAATKLRLLSPAENPLVRAVGRLPAGVHAKLLVAFVGASLLVVVVCLLGLRLLGQSNER
Ga0164300_100975863	3300012951	Soil	VSANVPQQGPTAGAATRRLLTPADNPLVRAVGRIPAGVNAKLLVAFGGVALLVVVHGALGLRLLGQSNERVD
Ga0164299_103877062	3300012958	Soil	LTAESVPQHDAAAGAAKGRLPKAADNLLVRAVGRVPAGVHLKLLVAFVGTALLVVGPGVCRLRLLGQCNGQGGTLGQLQVRAFAYGKLPSVTLNVRLLLAQN
Ga0164299_108733131	3300012958	Soil	LSAESAPQQDPAAGAAKPRLPKAADNLLVRTVGRVPAGVRVKLLVAFVGTALLVVVLGVLGLRLLGQSNERLETLGTLQ
Ga0164299_114333512	3300012958	Soil	MPNHDRARDTRRRLSSGDNPIVLAVARFPAGVHRKLLVAFVGTALLMVGVGLLGIRILGQSNDRVGTLGTLQERAFAYGKLRSDA
Ga0164301_112467321	3300012960	Soil	LSAESVPQQDAAAGASKHRLLKPAENPLVRAVGRVPAGVRVKLLVAFVGTALLVVVLGVLGLRLLGQSNERLETLG
Ga0164301_115777352	3300012960	Soil	LQEALAQQDTAAGASKRRLLSPAHNPLVRAVGRVPAGVHVKLLVAFVGTALLVVVVGVLGLR
Ga0164309_101731654	3300012984	Soil	LAESVPEQDAAVGDSKRRWLSPADNAVVRAVGRVPAGVHVKLLVAFVGTALLVVVLGVLGLR
Ga0164309_112103531	3300012984	Soil	LSHGAVSQDKAAGESKRRLLSPAHNPLVRAVGRVPAGVHVKLLVAFVGTALLVVVVGVLGLRLLGQSNERVATLGTLQVRAA
Ga0164307_111738071	3300012987	Soil	MPQERAAGQTRRLLSFADHPLVRAVARLPAGVHLKLLVAFVGTALLMVGVGVLGLRLLGQ
Ga0157374_115720701	3300013296	Miscanthus Rhizosphere	MPQERAAGQTRRRLLSSADNPLVRAVARLPAGVHLKLLIACVGTALLVVGVGILGLRLLGQANERVET
Ga0157375_102283001	3300013308	Miscanthus Rhizosphere	VSRARLPQQTTAADAPPRRLLSRADNPLVRAVARVPAGVHAKLLVAFLGTAVLMVVLGALGLRLFG
Ga0157375_119721162	3300013308	Miscanthus Rhizosphere	VSADSVAHQDAAAGTPKRRLLSPAGDPLVRAVGRIPAGVHAKLLVAFVGTALLVVVVAVLGLRLL
Ga0163163_106215993	3300014325	Switchgrass Rhizosphere	LQEAVSHQDTAAGASKRRLLSPADNPLVRVVGRLPAGVHVKLLVAFVGTALLVVVLGVLGLRLLGQSNER
Ga0157377_106225092	3300014745	Miscanthus Rhizosphere	VPEQDEAARASKRRRLSAADNALVRAVGRMPAGVHVKLLVAFVGTALLVVVLGVLGLRLLGESNKRVETLGTLQIRAFAYGK
Ga0157376_130811562	3300014969	Miscanthus Rhizosphere	MAAGTGPSRLLSPADNALVRAVGRLPAGVHVKLLVAFVGTAVLVVVLGALGLRLLGQSNERVEMLGTLQ*
Ga0173478_101899321	3300015201	Soil	VSQEAVPQQDTAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVGTALLVVVLGVLGLRLIGQSNQRVETLGTLQVRAFA
Ga0173478_104246442	3300015201	Soil	VDLEVPQTGTDAAATKLRLLSPAENPLVRAVGRLPAGVHAKLLVAFVGASLLVVVVCLLGLRLLGQSNERVETLGTLQ
Ga0132258_102578107	3300015371	Arabidopsis Rhizosphere	LSAEPVAKQDAAAGASKRRLLSPADNPVVRAVGRAPAGVHAKLLVAFVGTALLVVVLGVLGLRLLGESNKRVE
Ga0132256_1010116311	3300015372	Arabidopsis Rhizosphere	LAQEAVPQQKTAAGTSKRRLLSPADNPLVRAVGRVPAGVHAKLLVAFVGTALLVVVVGVLGLRLLGQSNER
Ga0132255_1016966201	3300015374	Arabidopsis Rhizosphere	MPQERAARQTRWRLLSSADHPLVRAVARFPAGGHLKLLVGFVGTAVLMVGVGLLGLRLLGQANQRVETLGT
Ga0184638_10145781	3300018052	Groundwater Sediment	MLSDAHAARQRAAPIEKRRRLSPGDNPVVRAVGTIPAKVRTKLLVAFVGTAVVVVVVALLGLRVLGQSNDRVKGLGILQER
Ga0184625_103469451	3300018081	Groundwater Sediment	VPDQDTAAGAAKRRLLSPADNPLVRAVGRVPAGVHAKLLVAFVGTALLVVVLGVLGLRLLGQSNERVETLGT
Ga0173481_100931091	3300019356	Soil	VQTKRRWLSPGDDPLVRAVARLPARVHVKLLVAFVSTALLVVGVSLLGLRLLGQSNERVETLGTLQERAFA
Ga0190264_101720973	3300019377	Soil	VRRLLTPDDNPLVRAVGRLPAGVHAKLLVAFVGTALLVVGIGLLGLRLLGESN
Ga0182009_106717742	3300021445	Soil	MPADASKRRLLSPAGNPVVRAVGRMPAGVHMKLLVAFVVTALLVAVLGVLGLRLLGQSNERVGALGTLQVRAFSYGKLRSD
Ga0247788_10878071	3300022901	Soil	VPQGNAAAGRTHRRLLSRADNPLVRAVGRLPAGVHAKLLVAFLGTALLMVILGALGLRLFGQSNERVETLGALQ
Ga0247802_10304112	3300023077	Soil	VQTKRRWLSPGDDPLVRAVARLPARVHVKLLVAFVSTALLVVGVSLLGLRLLGQSNERVATLGTLQ
Ga0247794_102606091	3300024055	Soil	VRQQTTAAGAPRRRLLSPADNTLVRAVGRLPAGVHAKLLVAFVGTVLLVIVLGVLGLRLLGQSNERVETLG
Ga0207682_104288562	3300025893	Miscanthus Rhizosphere	VSRARLPQQTTAADAPPRRLLSRADNPLVRAVARVPAGVHAKLLVAFLGTAVLMVVLGALGLRLFEAAVRHVK
Ga0207688_102321261	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MQEQDRAAGETNRRLLSPADHPLVLAVARVPAGVHIKLLVAFVGTALLVVGVGLLGLRLLGQSNDRVATLGTLQERAFAYGKLRSDALHTRLLLSENVAGDFHKSLG
Ga0207688_105278761	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VPEETTAAGGPRRRLLSPADNRLVRAVGRLPAGVHAKLLVAFVGTALLVIVLGVLGLRLLGQSNE
Ga0207647_104659462	3300025904	Corn Rhizosphere	MPQQGKAAGQAKRRLLSSADNPLVRAVARLPARVHVKLLVAFVGTALLVVVLGVLGLRLIGQSNQRVETLGTL
Ga0207654_104114841	3300025911	Corn Rhizosphere	VSQEAVSQQDTAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVGTALLVVVLGVLGLRLIG
Ga0207649_107183431	3300025920	Corn Rhizosphere	VSADSVAHPEPAAGAPKRRLLSPAGDPFVRAVGRIPAGVHAKLLVAFVGTALLVVVVAVLGLRLLG
Ga0207646_106100481	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VSANVPQQGPTAGAATRRLLTPADNPLVRAVGRIPAGVHAKLLVAFGGVALLVVVLGALGLR
Ga0207681_103323473	3300025923	Switchgrass Rhizosphere	VPEEKAAAGTTHRRLLSRADNPLVRAVGRLPAGVHAKLLVAFLGTALLMVILGALGLRLFGQS
Ga0207687_105885252	3300025927	Miscanthus Rhizosphere	LSAESAPQQDPAAGAAKPRLPKPADNLLVRTVGRVPAGVRVKLLVAFVGTALLVVVLGVLGLRLLGQSNERLETLGKLQVRA
Ga0207709_101620254	3300025935	Miscanthus Rhizosphere	MPQERAAGQTRRRLLSSADNPLVRAVARLPAGVHLKLLIAFVGTALLVVGVGILGLRLLGQANQRVETLGTLQE
Ga0207669_111413581	3300025937	Miscanthus Rhizosphere	MQDQERAAGETSRRLLSPADHPLVLAVARVPAGVHIKLLVAFVGTALLVVGVGLLGLRLLGQSNDRV
Ga0207691_107102192	3300025940	Miscanthus Rhizosphere	VSADSVAHPEPAAGAPKRRLLSPAGDPFVRAVGRIPAGVHAKLLVAFVGTALLVVVVAVLGLRLLGQTNERVETLGKLQARA
Ga0207661_101631141	3300025944	Corn Rhizosphere	LQEAVSHQDTAAGASKRRLLSPADNPLVRVVGRLPAGVHVKLLVAFVGTALLVVVLGVLGLRLLGQSN
Ga0207712_107777092	3300025961	Switchgrass Rhizosphere	VSFGHPPRQETAAGAKQRRLLSPADNPLVRAVGRLPAGVHAKLLVAFVSTTLLVVVLGVLGLRLLGQSNEPLLR
Ga0207640_111569742	3300025981	Corn Rhizosphere	MPQERAAGQTRRRLLSSADNPLVRAVARLPAGVHLKLLVAFVGTAVLMVGVGLLGLRLL
Ga0207677_113063841	3300026023	Miscanthus Rhizosphere	VHQDAAAAAPKRRLLSPAGDPLVRAVGRVPAGVHAKLLVAFVGTAMLVVAVAVLGLRL
Ga0207678_103690971	3300026067	Corn Rhizosphere	VLQEDRAAVQTKRRWLSPGDDPLVRAVARLPARVHVKLLVAFVGTAFLVVGVGLLGLRFLGQSNERVETL
Ga0207708_116523091	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VSADSVAHQDAAAGTPKRRLLSPAGDPLVRAVGRIPAGVHAKLLVAFVGTALLVVVVAVLGLRLLGQANERVDSLGTLQARAAAYGK
Ga0207648_119677462	3300026089	Miscanthus Rhizosphere	VSADSVAHPEPAAGAPKRRLLSPAGDPFVRAVGRIPAGVHAKLLVAFVGTALLVVVVAVLGL
Ga0207676_121802052	3300026095	Switchgrass Rhizosphere	MQEQDRAAGETNRRLLSPADHPLVLAVARVPAGVHIKLLVAFVGTALLVVGVGLLGLRLLGQSNDRVATLGTLQERAFAYGKLRSDALHTRLLLSENVAGD
Ga0207698_125191911	3300026142	Corn Rhizosphere	MPQERAAGQTRRRLLSSADNPLVRAVARLPAGVHLKLLIAFVGTALLVVGVGILGLRLLGQANERVETLGTL
Ga0209981_10706451	3300027378	Arabidopsis Thaliana Rhizosphere	VSQEAIPREETAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVGTALLVVVLGVLGVRLIGQ
Ga0209481_103019702	3300027880	Populus Rhizosphere	VPQPGSATSSAKRRLLSPADNPLVRAVGRLPTGVHAKLLVAFVGTTLLVVVLGVLGLRLLGQSNERVETLGTL
Ga0268265_105127221	3300028380	Switchgrass Rhizosphere	MPQQGKAAGQAKRRLLSSADNPLVRAVARLPARVHVKLLVAFVGTALLVVGVGLLGLRLLGQSNERVVTLGTLQDRA
Ga0307312_103237271	3300028828	Soil	MAAGASKRRLLSPAGNPLVRAVGRMPAGVHVKLLVAFVGTALLVVVVGVLGLRLLGQSNERVEALGTLQERAFAYGKLRS
Ga0307289_104307991	3300028875	Soil	LSQQAVPQQDTAAGASKRRLLSPADNFLVRAVGRVPAGVHVKLLVAFMGTALLVVVVGALGLRLLGQSNER
Ga0310886_104281102	3300031562	Soil	VSKEAVPQQASAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVGTTLLVVVLGGLGLRLIGQSNERVETLGTLQVRAFAYGKL
Ga0307409_1019435731	3300031995	Rhizosphere	VSQEAVPQHDTAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVGTALLVVVLGGLGLRLI
Ga0310890_103644563	3300032075	Soil	VSKEAVPQQASAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVGTTLLVVVLGGLGLRLIGQSNERVETLGTLQVRAFAY
Ga0310895_100847653	3300032122	Soil	LSAEPVAKQGAAAGASKRRLLSPADNPVVRAVGRAPAGVHAKLLVAFVGTALLVVVLGVLGLRLLGESNKRVETLRTLQVRAF
Ga0314780_116435_414_626	3300034659	Soil	VSEGHASECVEGAAEPEKRRLLSPADNPVVRAVGRVPTGVHVKLLVAFVGTALLVVVVAVLGLRLLGQSNE
Ga0314783_036886_3_209	3300034662	Soil	VPKETAAGAPRRRLLSPADNPLVRAVGRLPAGVHAKLLVAFVGTALLVVVLGVLGLRLLGQSNERVETL
Ga0314784_078724_1_204	3300034663	Soil	VQKGKAAAGTTHRRLLSRADNPLVRAVGRLPAGVHAKLLVAFLGTAVLMVVLGALGLRLFGQSNERVE
Ga0314786_050372_2_214	3300034664	Soil	VSKEAVPQQSSAAGASKRRLLSPADNPLVRAVGRVPAGVHVKLLVAFVGTALLVVVLGVLGLRLIGQSNQR
Ga0314787_037119_579_761	3300034665	Soil	MSQEAVPQQDTAAGTSKRRLLSPAENPLVRAVGRVPAGVHAKLLVAFVGTALLVVVVGVL
Ga0314787_041335_1_279	3300034665	Soil	MQDQERAAGETSRRLLSPADHPLVLAVARVPAGVHIKLLVAFVGTALLVVGVGLLGLRLLGQSNDRVATLGTLQERAFAYGKLRSDALHTRLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066551

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences