Metagenome / Metatranscriptome Family F066758

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066758
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	62 residues
Representative Sequence	RLKVYGQLDLDIMNQVAPMAVERTYNNRYFFSNRVNPKGLVYQGIYQDWSIPAMALK
Number of Associated Samples	115
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.17 %
% of genes near scaffold ends (potentially truncated)	96.03 %
% of genes from short scaffolds (< 2000 bps)	96.03 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.714 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.460 % of family members)
Environment Ontology (ENVO)	Unclassified (26.984 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.032 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.65% β-sheet: 0.00% Coil/Unstructured: 42.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF00528	BPD_transp_1	15.08
PF03309	Pan_kinase	13.49
PF00496	SBP_bac_5	9.52
PF00005	ABC_tran	3.17
PF08352	oligo_HPY	1.59
PF01207	Dus	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1521	Pantothenate kinase type III	Coenzyme transport and metabolism [H]	13.49
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.71 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.71 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.71 %
Unclassified	root	N/A	14.29 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.16 %
Unclassified	root	N/A	14.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70.63 %
Unclassified	root	N/A	14.29 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	65.87 %
Unclassified	root	N/A	14.29 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	7.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	65.08 %
Unclassified	root	N/A	14.29 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	65.08 %
Unclassified	root	N/A	14.29 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.94 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_161593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2154	Open in IMG/M
3300000955\|JGI1027J12803_108427191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300002568\|C688J35102_119528186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	713	Open in IMG/M
3300004643\|Ga0062591_100796570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300005184\|Ga0066671_10298939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1009	Open in IMG/M
3300005332\|Ga0066388_108260761	Not Available	519	Open in IMG/M
3300005340\|Ga0070689_101113957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	706	Open in IMG/M
3300005347\|Ga0070668_100925521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300005347\|Ga0070668_102131038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300005353\|Ga0070669_101470188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300005440\|Ga0070705_100361520	Not Available	1062	Open in IMG/M
3300005440\|Ga0070705_101164802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300005441\|Ga0070700_100844339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300005457\|Ga0070662_101603177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300005467\|Ga0070706_100655005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	975	Open in IMG/M
3300005518\|Ga0070699_101699420	Not Available	578	Open in IMG/M
3300005535\|Ga0070684_101778453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300005549\|Ga0070704_101255330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	677	Open in IMG/M
3300005558\|Ga0066698_10692366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	673	Open in IMG/M
3300005564\|Ga0070664_101361642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300005937\|Ga0081455_10150164	All Organisms → cellular organisms → Bacteria	1797	Open in IMG/M
3300006575\|Ga0074053_10004660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1102	Open in IMG/M
3300006577\|Ga0074050_11835582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1198	Open in IMG/M
3300006579\|Ga0074054_11988214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300006755\|Ga0079222_12689046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300006847\|Ga0075431_101735251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	581	Open in IMG/M
3300006854\|Ga0075425_101837890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300006854\|Ga0075425_102344873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300006871\|Ga0075434_100470641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1278	Open in IMG/M
3300006914\|Ga0075436_101112388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300006969\|Ga0075419_11227537	Not Available	554	Open in IMG/M
3300007076\|Ga0075435_100687580	Not Available	889	Open in IMG/M
3300009137\|Ga0066709_101936096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300009162\|Ga0075423_12628223	Not Available	550	Open in IMG/M
3300009817\|Ga0105062_1120048	Not Available	532	Open in IMG/M
3300009840\|Ga0126313_10234219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1420	Open in IMG/M
3300010038\|Ga0126315_10503405	All Organisms → cellular organisms → Bacteria → Terrabacteria group	773	Open in IMG/M
3300010041\|Ga0126312_10681636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	741	Open in IMG/M
3300010076\|Ga0127430_146986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300010092\|Ga0127468_1021860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300010110\|Ga0126316_1016320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	554	Open in IMG/M
3300010120\|Ga0127451_1003289	Not Available	574	Open in IMG/M
3300010126\|Ga0127482_1107257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	877	Open in IMG/M
3300010147\|Ga0126319_1188719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300010147\|Ga0126319_1419862	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1300	Open in IMG/M
3300010154\|Ga0127503_10843739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1846	Open in IMG/M
3300010326\|Ga0134065_10271009	Not Available	640	Open in IMG/M
3300010337\|Ga0134062_10361583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300010337\|Ga0134062_10591902	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	570	Open in IMG/M
3300011412\|Ga0137424_1024184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	958	Open in IMG/M
3300012198\|Ga0137364_10349557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1103	Open in IMG/M
3300012200\|Ga0137382_10142727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1617	Open in IMG/M
3300012200\|Ga0137382_10661435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300012203\|Ga0137399_11714773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300012208\|Ga0137376_10822764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	799	Open in IMG/M
3300012212\|Ga0150985_117797426	Not Available	654	Open in IMG/M
3300012356\|Ga0137371_11383887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300012377\|Ga0134029_1213915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300012382\|Ga0134038_1163346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	951	Open in IMG/M
3300012395\|Ga0134044_1261563	Not Available	602	Open in IMG/M
3300012409\|Ga0134045_1328664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1098	Open in IMG/M
3300012469\|Ga0150984_117956295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300012532\|Ga0137373_10727809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300012895\|Ga0157309_10047089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1058	Open in IMG/M
3300012906\|Ga0157295_10004083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2232	Open in IMG/M
3300012907\|Ga0157283_10031808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1092	Open in IMG/M
3300012908\|Ga0157286_10337852	Not Available	564	Open in IMG/M
3300012915\|Ga0157302_10222865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300012955\|Ga0164298_10656649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	729	Open in IMG/M
3300012975\|Ga0134110_10037309	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300012977\|Ga0134087_10829666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300012985\|Ga0164308_11389579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300013105\|Ga0157369_10394211	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300013308\|Ga0157375_11030104	Not Available	962	Open in IMG/M
3300014968\|Ga0157379_11567286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300015200\|Ga0173480_10159844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1159	Open in IMG/M
3300015371\|Ga0132258_11130310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1980	Open in IMG/M
3300015371\|Ga0132258_11330698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1815	Open in IMG/M
3300015374\|Ga0132255_100568482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1673	Open in IMG/M
3300015374\|Ga0132255_104555042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300017695\|Ga0180121_10383316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300018031\|Ga0184634_10432650	Not Available	596	Open in IMG/M
3300018075\|Ga0184632_10271976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300018075\|Ga0184632_10476701	Not Available	514	Open in IMG/M
3300018431\|Ga0066655_11114115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300019257\|Ga0180115_1017926	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300019263\|Ga0184647_1055144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	900	Open in IMG/M
3300019279\|Ga0184642_1617819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300021080\|Ga0210382_10157018	Not Available	977	Open in IMG/M
3300021344\|Ga0193719_10057952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1679	Open in IMG/M
3300021445\|Ga0182009_10549408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300022195\|Ga0222625_1232946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	845	Open in IMG/M
3300022195\|Ga0222625_1688574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	761	Open in IMG/M
3300022886\|Ga0247746_1063719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300022898\|Ga0247745_1094072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300022915\|Ga0247790_10091409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	742	Open in IMG/M
3300025321\|Ga0207656_10355692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300025920\|Ga0207649_10653867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	812	Open in IMG/M
3300025933\|Ga0207706_11221205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300025972\|Ga0207668_11389202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300026730\|Ga0207491_101428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	527	Open in IMG/M
3300027401\|Ga0208637_1038031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300027479\|Ga0207636_1005197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300027717\|Ga0209998_10069092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	842	Open in IMG/M
3300028704\|Ga0307321_1043606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	840	Open in IMG/M
3300028707\|Ga0307291_1142477	Not Available	608	Open in IMG/M
3300028711\|Ga0307293_10026714	All Organisms → cellular organisms → Bacteria	1729	Open in IMG/M
3300028713\|Ga0307303_10160302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300028716\|Ga0307311_10173038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300028721\|Ga0307315_10005505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3076	Open in IMG/M
3300028744\|Ga0307318_10132203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300028796\|Ga0307287_10074979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1264	Open in IMG/M
3300028814\|Ga0307302_10060967	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300028884\|Ga0307308_10024823	All Organisms → cellular organisms → Bacteria	2767	Open in IMG/M
3300030576\|Ga0247644_1158596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	556	Open in IMG/M
3300030902\|Ga0308202_1001168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2500	Open in IMG/M
3300030905\|Ga0308200_1142721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300031226\|Ga0307497_10402266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300031740\|Ga0307468_100475830	Not Available	982	Open in IMG/M
3300031854\|Ga0310904_10888988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	629	Open in IMG/M
3300031938\|Ga0308175_102969946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300031996\|Ga0308176_12708680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300034662\|Ga0314783_005611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1667	Open in IMG/M
3300034667\|Ga0314792_044263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	958	Open in IMG/M
3300034667\|Ga0314792_131724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300034676\|Ga0314801_145723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.78%
Host-Associated	Host-Associated	22.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.87%
Plants	Host-Associated → Plants	22.22%
Aquatic	Environmental → Aquatic	11.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.87%
Freshwater	Environmental → Aquatic → Freshwater	8.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.35%
Sediment	Environmental → Aquatic → Sediment	3.17%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.73%
Loam	Environmental → Terrestrial → Soil → Loam	7.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.14%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.97%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.17%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.38%
Ice	Environmental → Aquatic → Freshwater → Ice	0.79%
Sand	Environmental → Terrestrial → Soil → Sand	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.35%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.56%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.56%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.76%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.97%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	3.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.32%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.56%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	4.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.76%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.76%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	3.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.38%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.59%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.79%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.79%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010076	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010092	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010110	Soil microbial communities from Illinois, USA to study soil gas exchange rates - BV-IL-AGR metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010120	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010126	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012377	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012382	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012395	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012409	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019263	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022886	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S079-202R-5	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026730	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A5-10 (SPAdes)	Environmental	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A4w-11 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030576	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cb9 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_02687690	2199352025	Soil	MAQAARLVGPNRLKVYGQMDLDIMNQAAPMAIERTYNNRYLFSSRVNPKSLVYQGIYQDFSIPAMALK
JGI1027J12803_1084271912	3300000955	Soil	KRLKVYGQMDLDIMQKAAPMAIERTYNNRYFFSNRVDPKGLVYQGIYQDW
C688J35102_1195281862	3300002568	Soil	WNKKMENAAKLVGPTRLKVYGNLDLSIMKNAAPMAIERTYNNRYIFSNRVDPKSLVYQGIYQDFDWASIALK*
Ga0062591_1007965702	3300004643	Soil	KVYGQLDLDIMNKAAPMAITRTYANRYFFSNKINPKGLIYQGIYQDWSIPAMALK*
Ga0066671_102989392	3300005184	Soil	KLVGPKRYKVYGQMDLDLMKQVAPLAATRTYNNRYFFSNRINPKSLVYQGIYQDFSIGAMALK*
Ga0066388_1082607611	3300005332	Tropical Forest Soil	QLDLDIMNQAAPMAIERTYNNRYLFSNRVNPKSLVYQGIYQDFSINSMALLK*
Ga0070689_1011139572	3300005340	Switchgrass Rhizosphere	RMANAAKLVGPKRLKVYGQMDLDIMQKAAPMAIERTYNNRYFFSNRVDPKGLVYQGIYQDWSIPALALK*
Ga0070668_1009255211	3300005347	Switchgrass Rhizosphere	WNARMANAAKLVGPKRLKVYGQLDLDIMNKAAPMAITRTYNNRYFFSNKVNPKGLVYQGIYQDWSIPAMALK*
Ga0070668_1021310381	3300005347	Switchgrass Rhizosphere	GPKRYKVYGQLDLDLMRQIAPVAVERTYNNRYLFSDRVEPKSLVYQGIYSDWSIPALALK
Ga0070669_1014701881	3300005353	Switchgrass Rhizosphere	AKLVGPKRLKVYGQLDLDIMNKAAPMAITRTYNNRYFFSNKVNPKGLVYQGIYQDWSIPAMALK*
Ga0070705_1003615202	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LVGPKRFKVYGQLDLDLMREVAPVAVERTYNNRYWFSNRVDQRSLVYQGIYFDWSIPALALK*
Ga0070705_1011648021	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	KVYGQMDLDIMQKAAPMAIERTYNNRYFFSNRVDPKGLVYQGIYQDWSIPALALK*
Ga0070700_1008443392	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	LKVYGQLDLDIMNQAAPMAIERTYNNRYLFSNRVNAKSLVYQGIYQDFSIPAMALK*
Ga0070662_1016031771	3300005457	Corn Rhizosphere	VYGQLDLDLMRQIAPVAVERTYNNRYLFSDRVEPKSLVYQGIYSDWSIPALALK*
Ga0070706_1006550051	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RLKVYGQLDLDIMNQVAPMAVERTYNNRYFFSNRVNPKGLVYQGIYQDWSIPAMALK*
Ga0070699_1016994201	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	RLVGPNRLKVYGQLDLDIMSQAAPMAIERTYNNRYIFSNRVNPQSLVYQGIYQDFDWASIALK*
Ga0070684_1017784532	3300005535	Corn Rhizosphere	VYGQLDIDIMKKAAPMAIERTYNNRYFFSNRVNPKGLVYQGIYQDWSIPALALK*
Ga0070704_1012553301	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	PKRLKVYGQLDLDIMNKAAPMAITRTYNNRYFFSNKVNPKGLVYQGIYQDWSIPAMALK*
Ga0066698_106923662	3300005558	Soil	AAARLVGPKRFRVYGQLDLDLMRQVAPMAVERTYNNRYFFSNRVNPKALIYQGIYQDWSIPAMALK*
Ga0070664_1013616422	3300005564	Corn Rhizosphere	GPNRLKVYGQLDLDIMSQAAPMAVERTYNNRYIFSNRVNPKSLVYQGIYQDFDWAAIALK
Ga0081455_101501643	3300005937	Tabebuia Heterophylla Rhizosphere	GAQRLKVYGQMDIDIMQKAAPVAVERTYNNRYFFSNRVDPKGLVYQGIYQDWSIPSMALK
Ga0074053_100046602	3300006575	Soil	EAAAKLVGPKRFKVYGQLDLDLMREVAPVAVERTYNRRYLFSDQVDPKSLVYQGIYSDWSIPALALK*
Ga0074050_118355821	3300006577	Soil	GQLDLDIMNKVAPMAVERTYNNRYFFSNRVNPKSLVYQGIYQDWSIPAMALK*
Ga0074054_119882141	3300006579	Soil	GLRVGNGQLDLDIMRQVAPIAVERTYNNRYIFSARVDPKSLVYQGIYQDWSIPALALK*
Ga0079222_126890462	3300006755	Agricultural Soil	RLKVYGQMDLDIMQKAAPMAIERTYNNRYFFSNRVDPKGLVYQGIYQDWSIPALALK*
Ga0075431_1017352512	3300006847	Populus Rhizosphere	AKLVGPKRYKVYGQLDLDIMRQVAPMAVERTYNNRYFFSNRVDPKSLVYQGIYQDFSIPAMALK*
Ga0075425_1018378902	3300006854	Populus Rhizosphere	KLVGPKRFKVYGQMDIDLMRQVAPIAAMRTYNNRYLFSDRVDPKSLVFQSIYSDWSIPALALK*
Ga0075425_1023448732	3300006854	Populus Rhizosphere	KMESAAKLIGNKRLSTYSKLDLDIMKQVAPMAVERTYNNRYLFSNRVNPKSLVYQGIYQDWSIPAMALK*
Ga0075434_1004706411	3300006871	Populus Rhizosphere	PKRLKVYGQLDLDLMNQVAPVAAERTYNNRYFFSNRVNPKGLVYQGIYQDFSIPAMALK*
Ga0075436_1011123881	3300006914	Populus Rhizosphere	YGQMDLDLMRDVAPIVVTRTYNNRYLFSDRVDPKHLVYQGIYSDWSIPALALK*
Ga0075419_112275371	3300006969	Populus Rhizosphere	RLSTYAKMDIDITKQVAPMAVERTYNNRYIFSNRVNPKGLVYQGIYQDFSIPAMALK*
Ga0075435_1006875802	3300007076	Populus Rhizosphere	FKVYGKLDLDIMRQVAPMAVERTYNNRYLFSDRVDPKSLVYQGIYQDWSIPALALK*
Ga0066709_1019360961	3300009137	Grasslands Soil	KMAAAARLVGPKRYKVYGQMDLDLMKQVAPLAATRTYNNRYFFSNRINPKSLVYQGIYQDFSIGAMALK*
Ga0075423_126282232	3300009162	Populus Rhizosphere	LKVYGQLDLDIMNQAAPMAIERTYNNRYIFSNRVNPKSLIYQGIYQDWSIPALALK*
Ga0105062_11200481	3300009817	Groundwater Sand	GPKRLAVYGQMDLDIMKQAAPMAIERTYNNRYFFSNKVNPKSLVYQGIYQDWSIGALALK
Ga0126313_102342193	3300009840	Serpentine Soil	YGQMDIDIMKKAAPVAVERTYNNRYFFSNRVNPKGLVYQGIYQDWSIPAMALK*
Ga0126315_105034052	3300010038	Serpentine Soil	KVYGQLDLDIMRQAAPMAIERTYNNRYLFSNRVNPKSLVYQGIYQDFSIPAMALK*
Ga0126312_106816361	3300010041	Serpentine Soil	AKLVGPKRLKVYGQMDLDIMQKAAPMAIERTYNNRYFFSNRVDTKGLVYQGIYQDWSIPALALK*
Ga0127430_1469861	3300010076	Grasslands Soil	AAAKLVGPKRYKVYGQMDLDLMKQVAPLAATRTYNNRYFFSSRINPKSLVYQGIYQDFSIGAMALK*
Ga0127468_10218601	3300010092	Grasslands Soil	VGPKRLKVYSKLDLQITKQAAPIAAERTYNNRYFFSNKVNPKSLIYQGIYQDFDIAAQALK*
Ga0126316_10163201	3300010110	Soil	RLVGPNRLKVYGQLDLDIMNQAAPMAIERTYNNRYVFSNRVNPKSLVYQGIYQDFSINAMALK*
Ga0127451_10032891	3300010120	Grasslands Soil	KLVGPKRYKVYGQMDLDLMKQVAPLAATRTYNNRYFFSNRVNPKSLVYQGIYQDFSIGAMALK*
Ga0127482_11072571	3300010126	Grasslands Soil	MNIAKWNKKMQAAARLVGPKRLKVYGQLDLDLMNQVAPVAAERTYNNRYFFSNRVNPKGLVYQGIYQDFSI
Ga0126319_11887192	3300010147	Soil	YGKLDIDITKQVAPMAIERTYNNRYLFSNRVNPKSLIYQGIYQDWSIPAMALK*
Ga0126319_14198622	3300010147	Soil	RLKVYGQLDLDIMNKAAPMAIERTYNNRYFFSNKINPKGLVYQGIYQDYSIPALALK*
Ga0127503_108437391	3300010154	Soil	RMANAAKLVGPKRLKVYGQLDLDIMNKAAPMAITRTYNNRYFFSNKINPKGLIYQGIYQDWSIPAMALK*
Ga0134065_102710091	3300010326	Grasslands Soil	KMASAAKLVGPRRLKVYSQMDIDIMKQVAPMAITRTYNTRYLFSNRVNPKSLVFQGIYSDFSIGAMALK*
Ga0134062_103615832	3300010337	Grasslands Soil	PKRFKVYGQMDLDLMRQVAPVAVERTYNNRYLFSDRVDPNSLVYQGIYSDWSIPALALK*
Ga0134062_105919021	3300010337	Grasslands Soil	AAAARLVGPKRYKVYGQMDLDLMKQVAPLAATRTYNNRYFFSNRINPKSLVYQGIYQDFSIGAMALK*
Ga0137424_10241841	3300011412	Soil	NKKMENAARLVGPKRLAVYGQMDIDIMKQAAPMAIERTYNNRYFFSNRVNPKSLVYQGIYQDWSIGALALK*
Ga0137364_103495571	3300012198	Vadose Zone Soil	ASAAKLVGPKRLKVYSQMDIDIMKQVAPMAVTRTYNTRYLFSNRVNPKSLVFQGIYSDFSIGAMALK*
Ga0137382_101427271	3300012200	Vadose Zone Soil	VGPKRLSTYGKMDIDLMKQVAPMAVERTYNNRYLFSGRVDPKSLVYQGIYQDWDIPALALK*
Ga0137382_106614352	3300012200	Vadose Zone Soil	RLVSPKRLKVYGQLDLDLMNQVAPVAAERTYNNRYFFSNRVNPKGLVYQGIYQDFSIPAMALK*
Ga0137399_117147732	3300012203	Vadose Zone Soil	DARLKAFGTLDLEVMRDAAPVVAMRTYNNHYFFSDNVNPKSLVYQGIYQDWSIPALALK*
Ga0137376_108227641	3300012208	Vadose Zone Soil	SVWNKKMNAAAKLVGPNRLKVYGQMDLDITKKAAPFAAERTYNNRYFFSNKVNTKALVYQGIYQDWSIPALAKK*
Ga0150985_1177974261	3300012212	Avena Fatua Rhizosphere	AKMEKAARLVGPNRLKVYGQMDIDIMNQAAPMAIERTYNNRYIFSNRVNPKSLIYQGIYQDWSIPALALK*
Ga0137371_113838871	3300012356	Vadose Zone Soil	WNKKMASAAKLVGPKRYKVYGQMDLDLMKQVAPLAATRTYNNRYFFSNRINPKSLVYQGIYQDFSIGAMALK*
Ga0134029_12139152	3300012377	Grasslands Soil	KRYKVYGQMDLDLMKQVAPLAATRTYNNRYFFSNRINPKSLVYQGIYQDFSIGAMALK*
Ga0134038_11633462	3300012382	Grasslands Soil	AKLVGPKRYKVYGQMDLDLMKQVAPLAATRTYNNRYLFSNRINPKSLVYQGIYQDFSIGAMALK*
Ga0134044_12615631	3300012395	Grasslands Soil	AKLVGPKRYKVYGQMDLDLMKQVAPLAATRTYNNRYFFSSRINPKSLVYQGIYQDFSIGAMALK*
Ga0134045_13286641	3300012409	Grasslands Soil	RLKVYGQMDIDIMKKAAPMAIERTYNNRYFFSDRVNPKGLVYQGIYQDWSIPAMALK*
Ga0150984_1179562951	3300012469	Avena Fatua Rhizosphere	KRLQVYGQLDLDIMKQAAPMAIERTYNNRYLFSNRVNPKSLIYQGIYQDFSIPAMALK*
Ga0137373_107278091	3300012532	Vadose Zone Soil	AASRLTGAKRLDVYGQMDIDLTNQVAPLAAERTYNNRYVFSNRVDPKGLVYQGIYQDWSIPALALK*
Ga0157309_100470892	3300012895	Soil	AAKLVGPKRLKVYGQMDLDIMQKAAPMAIERTYNNRYFFSNRVDTKGLVYQGIYQDWSIPAMALK*
Ga0157295_100040831	3300012906	Soil	PNRLKVYGQLDLDIMNQAAPMAIERTYNNRYVFSNRVNPKSLVYQGIYQDFSINAMALK*
Ga0157283_100318081	3300012907	Soil	NKRLSTYSKLDLDIMKQVAPMAVERTYNNRYLFSNRVNPKSLVYQGIYQDFSIPALALK*
Ga0157286_103378521	3300012908	Soil	RLKVYGQLDLDIMNQAAPMAIERTYNNRYVFSNRVNPKSLVYQGIYQDFSINAMALK*
Ga0157302_102228651	3300012915	Soil	RRMAAAAKLVGPKRLKVYGQMDLDIMQKAAPMAIERTYNNRYFFSSRVDPKGLVYQGIYQDWSIPALALK*
Ga0164298_106566491	3300012955	Soil	RYKVYGEHDLEIMRKVAPIAVERTYNNRYLFSERVDPKSLVYQGIYSDWSIPALALK*
Ga0134110_100373091	3300012975	Grasslands Soil	WNKKMSSAAKLVGPKRLKVYSQMDIDIMKQVAPMAVTRTYNTRYLFSNRVNPKSLVFQGIYSDFSIGAMALK*
Ga0134087_108296661	3300012977	Grasslands Soil	MENAAKLVGPTRLKVYGDLDLSIMKDAAPMAVERTYNNRYIFSNRVDPKSLVYQGIYQDFDWASIALK*
Ga0164308_113895792	3300012985	Soil	GPNRLKVYGQLDLDVMNQAAPMAVERTYNNRYIFSNRVNPKSLVYQGIYQDFDWASLALK
Ga0157369_103942111	3300013105	Corn Rhizosphere	NRLKVYGQLDLDIMSQAAPMAIERTYNNRYIFSNRVNPQSLVYQGIYQDFDWASIALK*
Ga0157375_110301041	3300013308	Miscanthus Rhizosphere	VDGELDLEIMRKVAPIAVERTYNNRYLFSERVDPKSLVYQGIYSDWSIPALALK*
Ga0157379_115672862	3300014968	Switchgrass Rhizosphere	SAARLVGPNRLKVYGQLDLDIMSQAAPMAIERTYNNRYIFSNRVNPQSLVYQGIYQDFDWASIALK*
Ga0173480_101598441	3300015200	Soil	GPKRLKVYGQMDLDIMQKAAPMAIERTYNNRYFFSSRVDPKGLVYQGIYQDWSIPALALK
Ga0132258_111303101	3300015371	Arabidopsis Rhizosphere	NRKMEEAAKLVGPKRYKVYGQLDLDIMRQVAPMAVMRTYNNRYFFSDRVDPKSLVYQGIYMDWSIPAMGLK*
Ga0132258_113306981	3300015371	Arabidopsis Rhizosphere	RLAVYGQMDIDIMKKAAPMAIERTYNNRYFFSNRVNNKSLVYQGIYQDWSIPALALK*
Ga0132255_1005684823	3300015374	Arabidopsis Rhizosphere	VGPKRLQVYGQMDIDIMKKAAPMAIERTYNNRYFFSNRVNTKGLVYQGIYQDWSIPALALK*
Ga0132255_1045550421	3300015374	Arabidopsis Rhizosphere	QVYGQMDIDIMKKAAPMAIERTYNNRYFFSNRVNNKSLVYQGIYQDWSIPALALK*
Ga0180121_103833161	3300017695	Polar Desert Sand	VYGQMDIDMMKKAAPMAVERLYTNRYFFSNRVEPRTLVFQGIYSDFSIPALSLK
Ga0184634_104326502	3300018031	Groundwater Sediment	KVYGQMDLDIMQKAAPMAIERTYNNRYFFSTRVDPKGLVYQGIYQDWSIPAMALK
Ga0184632_102719762	3300018075	Groundwater Sediment	VGPKRLKVYGQLDLDIMNQAAPMAVERTYNNRYIFSNRVNPKSLVYQGIYQDWDWGALAL
Ga0184632_104767011	3300018075	Groundwater Sediment	SVYGQMDIDIMKQAATVAAERTYSNRYFFSNRVNPKSLIYQGIYQDWSIGALAFK
Ga0066655_111141151	3300018431	Grasslands Soil	KKMERAARLVGPRRLTTYGNLDLDIMKQVAPMAVERTYNNRYFFSNRVNPRGLVYQGIYQDWSIPAMALK
Ga0180115_10179262	3300019257	Groundwater Sediment	RLVGPKRLQVYGQMDIDIMKQAAPMAIERTYNNRYFFSNRVNPKSLIYQGIYQDWSIGALALK
Ga0184647_10551441	3300019263	Groundwater Sediment	TYSKLDLDIMKQVAPMAVERTYNNRYLFSNRVNPKSLVYQGIYQDFSIPALALK
Ga0184642_16178191	3300019279	Groundwater Sediment	KRLKVYGQLDLDIMNQVAPMAIERTYNNRYFFGARVNPKSLVYQGIYQDFSIPAMALK
Ga0210382_101570182	3300021080	Groundwater Sediment	RKMEAAAKLVGPKRYKVYGQLDLDIMRQVAPVAVERTYNNRYFFSERVNPKSLVYQGIYQDWSIPALALK
Ga0193719_100579522	3300021344	Soil	RLVGPRRFRVYGQLDLDLMRQVAPVAVERTYNNRYLFSGRVDPRSLVYQGIYQDWSIPALALR
Ga0182009_105494082	3300021445	Soil	EPPEVERRMEAAAKLVGPKRFKAYGQLDLDLMREVAPVAVERTYNNRYFFSNRVDLQKLVYQGIYSDWSIPALVLR
Ga0222625_12329461	3300022195	Groundwater Sediment	MEAAARLVGPKRLSTYSKIDLDITKQVAPMGIERTYNNRYLFSNRVNPKSLIYQGIYQDWSIPAMALK
Ga0222625_16885742	3300022195	Groundwater Sediment	RLTTYSKLDLDIMKQVAPMAVERTYNNRYLFSNRVNPKSLVYQGIYQDFSIPALALK
Ga0247746_10637191	3300022886	Soil	LKVYGQLDLDIMNQAAPMAIERTYNNRYVFSNRVNPKSLVYQGIYQDFSINAMALK
Ga0247745_10940721	3300022898	Soil	LKVYGQMDLDIMQKAAPMAIERTYNNRYFFSSRVDPKGLVYQGIYQDWSIPALALK
Ga0247790_100914092	3300022915	Soil	AKLVGPKRFKVYGQMDLDLMREVAPIVAMRTYNNRYLFSDRVDPKHLVYQGIYQDWSIPALALK
Ga0207656_103556921	3300025321	Corn Rhizosphere	RLVGPNRLKVYGQLDLDIMSQAAPMAIERTYNNRYIFSNRVNPQSLVYQGIYQDFDWASIALK
Ga0207649_106538672	3300025920	Corn Rhizosphere	MESAARLVGPNRLKVYGQLDLDIMSQAAPMAIERTYNNRYIFSNRVNPQSLVYQGIYQDFDWASIALK
Ga0207706_112212052	3300025933	Corn Rhizosphere	RKMEAAAKLVGPKRYEVYGQLDLDIMRQVAPMAVERTYNNRYLFSDRVDPRSLAWNSIYQDWSIPALALK
Ga0207668_113892021	3300025972	Switchgrass Rhizosphere	KLDAAAKLVGPKRYKVYGQLDLDLMRQIAPVAVERTYNNRYLFSDRVEPKSLVYQGIYSDWSIPALALK
Ga0207491_1014282	3300026730	Soil	GPKRFKVYGQMDLDLMREVAPIVAMRTYNNRYLFSDRVDPKHLVYQGIYQDWSIPALALK
Ga0208637_10380311	3300027401	Soil	VYGQLDLDLMREVAPVAVERTYNNRYLFSDQVDPKSLVYQGIYSDWSIPALALK
Ga0207636_10051971	3300027479	Soil	MEKAARLVGPNRLKVYGQLDLDIMNQAAPMAIERTYNNRYVFSNRVNPKSLVYQGIYQDFSINAMALK
Ga0209998_100690921	3300027717	Arabidopsis Thaliana Rhizosphere	NSKMEKAARLVGPNRLKVYGQLDLDIMNQAAPMAIERTYNNRYVFSNRVNPKSLVYQGIYQDFSINAMALK
Ga0307321_10436062	3300028704	Soil	PKRLKVYGQLDLDIMNQAAPMAVERTYNNRYIFSNRVNPKSLVYQGIYQDWDWATAALK
Ga0307291_11424772	3300028707	Soil	ARLVGPKRLKVYGQLDLDIMNQAAPMAVERTYNNRYIFSNRVNPKSLVYQGIYQDWDWATAALK
Ga0307293_100267143	3300028711	Soil	WNKKMEKAARLVGPKRLKVYGQMDLDIMNKVAPMAVERTYNNRYFFSNRVNPKGLVYQGIYQDWSIPALALK
Ga0307303_101603021	3300028713	Soil	NRKMAAAAKLVGPKRFKVYGQMDLDLMRLVAPVAVERTYNNRYLFSDRVDPKSLVYQGIYQDWSIPALALK
Ga0307311_101730382	3300028716	Soil	PKRFKVYGQMDLDIMRQVAPMAVARTYNNRYLFSDRVDPKSLVYQGIYSDWSIPALALK
Ga0307315_100055051	3300028721	Soil	KVYGQLDLDIMNKAAPMAIERTYNNRYFFSNKVNPKGLIYQGIYQDWSIPAMALK
Ga0307318_101322031	3300028744	Soil	RLKVYGQLDLDIMNQAAPMAIERTYNNRYVFSNRVNPKSLIYQGIYQDWSIPAMALK
Ga0307287_100749792	3300028796	Soil	RLKVYGQMDLDIMQKAAPMAIERTYNNRYFFSTRVDPKGLVYQGIYQDWSIPALALK
Ga0307302_100609673	3300028814	Soil	NKKMTAAARLVGPNRLKVYGQLDLDIMNQAAPMAIERTYNNRYVFSNRVNPKSLIYQGIYQDWSIPAMALK
Ga0307308_100248231	3300028884	Soil	GPTKMAAAAKLVGPKRFKVYGQMDLDLMRLVAPVAVERTYNNRYLFSDRVDPKSLVYQGIYQDWSIPALALK
Ga0247644_11585962	3300030576	Soil	DKRMEAAARLVGPKRLSVYGQMDIDIMKKAAPLAAERTYNNRYFFSNKVNPKGLIYQGIYQDWSIGALALK
Ga0308202_10011684	3300030902	Soil	YGQLDLDIMNKVAPMAVERTFNNRYFFSNRVNPKSLIYQGIYQDWSIPAMALK
Ga0308200_11427212	3300030905	Soil	GPKRLSTYGKLDLDITKQVAPMGIERTYNNRYLFSDRVNPKSLVYQGIYQDFSIPALALK
Ga0307497_104022662	3300031226	Soil	SAKLVGPKRFKVYGQMDLDLMRQVAPVAAMRTYNNRYLFSDRVDPKSLVYQGIYQDWSIPALALK
Ga0307468_1004758301	3300031740	Hardwood Forest Soil	GQMDLDLMRQVAPIAAMRSYNNRYLFSDRVDPKSLVYQGIYQDWSIPALALK
Ga0310904_108889881	3300031854	Soil	FKVYGQMDLDLMRDVAPVAVERTYNNRYFFSDRVDPKSLVYQGIYSDWSIPALALK
Ga0308175_1029699461	3300031938	Soil	KRMQAAARLVGPNRLKVYGQLDLDIMSQAAPMAVERTYNNRYIFSNRVNPKSLVYQGIYQDFDWASIALK
Ga0308176_127086801	3300031996	Soil	AARLVGPKRLQVYGQLDLDIMKQAAPMAIERTYNNRYVFSKRVNPKSLVYQGIYQDFSIPAMALK
Ga0314783_005611_21_227	3300034662	Soil	MEAAARLVGPKRLKVYGQLDLDLMNQVAPVAAERTYNNRYFFSNRVNAKGLVYQGIYQDFSIPAMALK
Ga0314792_044263_761_958	3300034667	Soil	AARLVGPKRLQVYGQMDIDIMKKAAPMAIERTYNNRYFFSNKVDNKSLVYQGIYQDWSIPALALK
Ga0314792_131724_455_652	3300034667	Soil	AARLVGPKRLQVYGQMDIDIMKKAAPMAIERTYNNRYFFSNRVNNKSLVYQGIYQDWSIPALALK
Ga0314801_145723_360_566	3300034676	Soil	MANAAKLVGPKRLKVYGQMDLDIMQKAAPMAIERTYNNRYFFSNRVDPKGLVYQGIYQDWSIPALALK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066758

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences