Metagenome / Metatranscriptome Family F066885

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F066885
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	112 residues
Representative Sequence	MYRISRVLETSSVAITKIAGQVTDFDLHGWSDFLKELEGETGRWIVLDFCDVSRVDRKPAELLVRNLPKQVLLLNCPTGIKNMADSAGLRTQVLEPASGQHPCFLNCNPCNSSFQRDGGT
Number of Associated Samples	97
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.46 %
% of genes near scaffold ends (potentially truncated)	54.76 %
% of genes from short scaffolds (< 2000 bps)	82.54 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.762 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.492 % of family members)
Environment Ontology (ENVO)	Unclassified (61.905 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (73.810 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.00% β-sheet: 24.32% Coil/Unstructured: 50.68%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
c.13.2.1: Anti-sigma factor antagonist SpoIIaa	d1vc1a_	1vc1	0.73115
c.13.2.0: automated matches	d6m37b_	6m37	0.71138
c.1.8.0: automated matches	d3vupa_	3vup	0.70701
c.13.2.1: Anti-sigma factor antagonist SpoIIaa	d1h4xa_	1h4x	0.67734
c.14.1.2: Tail specific protease, catalytic domain	d1fc6a4	1fc6	0.67332

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF02954	HTH_8	32.54
PF10503	Esterase_PHB	16.67
PF13426	PAS_9	3.97
PF13360	PQQ_2	1.59
PF12695	Abhydrolase_5	1.59
PF02358	Trehalose_PPase	0.79
PF08811	DUF1800	0.79
PF13637	Ank_4	0.79
PF01738	DLH	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.79
COG5267	Uncharacterized conserved protein, DUF1800 family	Function unknown [S]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.76 %
Unclassified	root	N/A	45.24 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.76 %
Unclassified	root	N/A	45.24 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.76 %
Unclassified	root	N/A	45.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.24 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	16.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.29 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.76 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.79 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.24 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	16.67 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.17 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.38 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.59 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.79 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.79 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.79 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.24 %
candidate division KSB1	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.17 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.38 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.79 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.79 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.79 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.79 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.24 %
unclassified candidate division KSB1	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.17 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.38 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	0.79 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.79 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	0.79 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.24 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.17 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.38 %
Tepidicaulis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Tepidicaulis	0.79 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.79 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.79 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.24 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.17 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.38 %
Tepidicaulis marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Tepidicaulis → Tepidicaulis marinus	0.79 %
Fulvivirgaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae	0.79 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.79 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.24 %
candidate division KSB1 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	16.67 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.17 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.38 %
Fulvivirga	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae → Fulvivirga	0.79 %
Tepidicaulis marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Tepidicaulis → Tepidicaulis marinus	0.79 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.79 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	0.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.79 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004114\|Ga0062593_101038408	Not Available	844	Open in IMG/M
3300005327\|Ga0070658_10875292	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	781	Open in IMG/M
3300005328\|Ga0070676_10830429	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	684	Open in IMG/M
3300005329\|Ga0070683_100013649	All Organisms → cellular organisms → Bacteria	7091	Open in IMG/M
3300005329\|Ga0070683_100027319	All Organisms → cellular organisms → Bacteria → Proteobacteria	5146	Open in IMG/M
3300005330\|Ga0070690_100975823	Not Available	666	Open in IMG/M
3300005330\|Ga0070690_101255182	Not Available	592	Open in IMG/M
3300005335\|Ga0070666_11277719	Not Available	547	Open in IMG/M
3300005343\|Ga0070687_101389181	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	524	Open in IMG/M
3300005344\|Ga0070661_101811186	Not Available	518	Open in IMG/M
3300005364\|Ga0070673_100067166	All Organisms → cellular organisms → Bacteria → Proteobacteria	2867	Open in IMG/M
3300005367\|Ga0070667_101543346	Not Available	624	Open in IMG/M
3300005434\|Ga0070709_10014016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4524	Open in IMG/M
3300005437\|Ga0070710_10821566	Not Available	665	Open in IMG/M
3300005439\|Ga0070711_100460723	Not Available	1042	Open in IMG/M
3300005459\|Ga0068867_100253070	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	1433	Open in IMG/M
3300005459\|Ga0068867_101920204	Not Available	558	Open in IMG/M
3300005459\|Ga0068867_102119576	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	533	Open in IMG/M
3300005467\|Ga0070706_101507758	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300005535\|Ga0070684_100594451	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300005536\|Ga0070697_100743771	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Fulvivirgaceae → Fulvivirga	866	Open in IMG/M
3300005545\|Ga0070695_101566208	Not Available	549	Open in IMG/M
3300005547\|Ga0070693_101004313	Not Available	631	Open in IMG/M
3300005563\|Ga0068855_100058427	All Organisms → cellular organisms → Bacteria	4517	Open in IMG/M
3300005564\|Ga0070664_101720458	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	594	Open in IMG/M
3300005578\|Ga0068854_101733704	Not Available	572	Open in IMG/M
3300005615\|Ga0070702_101665781	Not Available	529	Open in IMG/M
3300005616\|Ga0068852_100002293	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13156	Open in IMG/M
3300005617\|Ga0068859_100045987	All Organisms → cellular organisms → Bacteria	4384	Open in IMG/M
3300005718\|Ga0068866_10409913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300005842\|Ga0068858_100564710	All Organisms → cellular organisms → Bacteria → Proteobacteria	1102	Open in IMG/M
3300005842\|Ga0068858_101127593	Not Available	770	Open in IMG/M
3300005843\|Ga0068860_100622708	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300006237\|Ga0097621_100205393	All Organisms → cellular organisms → Bacteria	1712	Open in IMG/M
3300006358\|Ga0068871_100310520	Not Available	1386	Open in IMG/M
3300006358\|Ga0068871_100819178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300006358\|Ga0068871_101461225	Not Available	645	Open in IMG/M
3300006755\|Ga0079222_10064576	All Organisms → cellular organisms → Bacteria → Proteobacteria	1771	Open in IMG/M
3300006881\|Ga0068865_101653929	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	576	Open in IMG/M
3300009098\|Ga0105245_10044035	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	3983	Open in IMG/M
3300009098\|Ga0105245_10447906	Not Available	1299	Open in IMG/M
3300009098\|Ga0105245_10610722	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300009098\|Ga0105245_10652375	Not Available	1083	Open in IMG/M
3300009098\|Ga0105245_12067877	Not Available	623	Open in IMG/M
3300009148\|Ga0105243_10065536	All Organisms → cellular organisms → Bacteria	2918	Open in IMG/M
3300009174\|Ga0105241_10038063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3627	Open in IMG/M
3300009174\|Ga0105241_10069653	All Organisms → cellular organisms → Bacteria → Proteobacteria	2728	Open in IMG/M
3300009174\|Ga0105241_11917530	Not Available	581	Open in IMG/M
3300009176\|Ga0105242_10004891	All Organisms → cellular organisms → Bacteria	10370	Open in IMG/M
3300009176\|Ga0105242_10197124	All Organisms → cellular organisms → Bacteria → Proteobacteria	1786	Open in IMG/M
3300009177\|Ga0105248_10626429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1214	Open in IMG/M
3300009545\|Ga0105237_10051176	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	4149	Open in IMG/M
3300010375\|Ga0105239_10023037	All Organisms → cellular organisms → Bacteria	6865	Open in IMG/M
3300010401\|Ga0134121_10052408	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	3348	Open in IMG/M
3300010403\|Ga0134123_10579645	Not Available	1074	Open in IMG/M
3300011119\|Ga0105246_12454088	Not Available	512	Open in IMG/M
3300011120\|Ga0150983_12291359	Not Available	1008	Open in IMG/M
3300011120\|Ga0150983_13377203	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300012212\|Ga0150985_115927261	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	863	Open in IMG/M
3300012469\|Ga0150984_118440613	Not Available	557	Open in IMG/M
3300013296\|Ga0157374_11083123	Not Available	822	Open in IMG/M
3300013296\|Ga0157374_11124813	Not Available	806	Open in IMG/M
3300013306\|Ga0163162_13282168	Not Available	518	Open in IMG/M
3300013307\|Ga0157372_11273953	All Organisms → cellular organisms → Bacteria → Proteobacteria	849	Open in IMG/M
3300013307\|Ga0157372_11299526	Not Available	839	Open in IMG/M
3300013308\|Ga0157375_11980950	Not Available	692	Open in IMG/M
3300014325\|Ga0163163_10864332	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300014325\|Ga0163163_12093644	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	625	Open in IMG/M
3300014969\|Ga0157376_12287932	Not Available	580	Open in IMG/M
3300019212\|Ga0180106_1258430	Not Available	525	Open in IMG/M
3300020076\|Ga0206355_1405252	Not Available	668	Open in IMG/M
3300021402\|Ga0210385_10751699	Not Available	747	Open in IMG/M
3300021445\|Ga0182009_10073613	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300021478\|Ga0210402_10293834	All Organisms → cellular organisms → Bacteria → Proteobacteria	1503	Open in IMG/M
3300022499\|Ga0242641_1007226	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300022500\|Ga0242643_113164	Not Available	620	Open in IMG/M
3300022503\|Ga0242650_1013745	Not Available	624	Open in IMG/M
3300022506\|Ga0242648_1003848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Tepidicaulis → Tepidicaulis marinus	1420	Open in IMG/M
3300022506\|Ga0242648_1074742	Not Available	557	Open in IMG/M
3300022508\|Ga0222728_1046453	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300022508\|Ga0222728_1052699	Not Available	688	Open in IMG/M
3300022510\|Ga0242652_1016982	All Organisms → cellular organisms → Bacteria → Proteobacteria	752	Open in IMG/M
3300022511\|Ga0242651_1010475	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300022525\|Ga0242656_1120059	Not Available	532	Open in IMG/M
3300022530\|Ga0242658_1018190	Not Available	1236	Open in IMG/M
3300022533\|Ga0242662_10020986	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300022717\|Ga0242661_1017279	Not Available	1125	Open in IMG/M
3300022722\|Ga0242657_1042236	Not Available	970	Open in IMG/M
3300025899\|Ga0207642_10269282	Not Available	975	Open in IMG/M
3300025909\|Ga0207705_10696420	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	790	Open in IMG/M
3300025910\|Ga0207684_10876320	All Organisms → cellular organisms → Bacteria → Proteobacteria	756	Open in IMG/M
3300025911\|Ga0207654_10043872	All Organisms → cellular organisms → Bacteria	2537	Open in IMG/M
3300025911\|Ga0207654_10128709	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	1600	Open in IMG/M
3300025911\|Ga0207654_10643793	All Organisms → cellular organisms → Bacteria → Proteobacteria	759	Open in IMG/M
3300025914\|Ga0207671_10022829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4725	Open in IMG/M
3300025914\|Ga0207671_10945050	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	680	Open in IMG/M
3300025914\|Ga0207671_11163629	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	604	Open in IMG/M
3300025916\|Ga0207663_10425837	Not Available	1020	Open in IMG/M
3300025919\|Ga0207657_10130799	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300025927\|Ga0207687_11735931	Not Available	535	Open in IMG/M
3300025934\|Ga0207686_10309908	Not Available	1175	Open in IMG/M
3300025938\|Ga0207704_10672546	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	855	Open in IMG/M
3300025941\|Ga0207711_10921908	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	812	Open in IMG/M
3300025942\|Ga0207689_11490789	Not Available	565	Open in IMG/M
3300025944\|Ga0207661_10268236	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	1522	Open in IMG/M
3300025944\|Ga0207661_10662302	Not Available	959	Open in IMG/M
3300025945\|Ga0207679_11853621	Not Available	551	Open in IMG/M
3300025960\|Ga0207651_10292516	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	1351	Open in IMG/M
3300025960\|Ga0207651_11700154	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	568	Open in IMG/M
3300025986\|Ga0207658_11403873	Not Available	639	Open in IMG/M
3300026023\|Ga0207677_12222756	Not Available	510	Open in IMG/M
3300026035\|Ga0207703_10267308	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	1548	Open in IMG/M
3300026089\|Ga0207648_10152819	All Organisms → cellular organisms → Bacteria → Proteobacteria	2037	Open in IMG/M
3300026089\|Ga0207648_10899463	Not Available	827	Open in IMG/M
3300026118\|Ga0207675_100894340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M
3300028381\|Ga0268264_10121722	Not Available	2301	Open in IMG/M
3300029701\|Ga0222748_1118743	Not Available	532	Open in IMG/M
3300031231\|Ga0170824_120595022	All Organisms → cellular organisms → Bacteria	1337	Open in IMG/M
3300031446\|Ga0170820_16736340	Not Available	542	Open in IMG/M
3300031716\|Ga0310813_12151567	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division KSB1 → unclassified candidate division KSB1 → candidate division KSB1 bacterium	528	Open in IMG/M
3300031720\|Ga0307469_11294374	Not Available	692	Open in IMG/M
3300033412\|Ga0310810_10147747	All Organisms → cellular organisms → Bacteria	2734	Open in IMG/M
3300033412\|Ga0310810_10233572	All Organisms → cellular organisms → Bacteria → Proteobacteria	2041	Open in IMG/M
3300033412\|Ga0310810_11051994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	686	Open in IMG/M
3300033475\|Ga0310811_11003966	Not Available	729	Open in IMG/M
3300034643\|Ga0370545_165212	Not Available	515	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	57.94%
Environmental	Environmental	42.06%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	57.94%
Terrestrial	Environmental → Terrestrial	41.27%
Aquatic	Environmental → Aquatic	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	34.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.25%
Roots	Host-Associated → Plants → Roots	4.76%
Freshwater	Environmental → Aquatic → Freshwater	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.81%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.46%
Loam	Environmental → Terrestrial → Soil → Loam	15.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.11%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	4.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.11%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	7.94%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	4.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.49%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	8.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	8.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	8.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.94%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.56%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.76%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.76%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.76%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	3.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.17%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.59%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300019212	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT25_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022500	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022510	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022511	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062593_1010384081	3300004114	Soil	MTRAVIIIMYRIGRVLETSSVAIVKVAGQVTDFDLSGWSDFLKELEGETGRWIVLDFCDVSRVDKKPAELLVRTLPQQVLLLNCPTGIKNMADSAGLRNQVLEPAGGQHPCFLNCNSCNSSFQPDGGTR*
Ga0070658_108752922	3300005327	Corn Rhizosphere	MYRISRVFETSCAAILKIAGQITDLDVDGWSEFLKDQENETGRFIILDFCDVSRVDRKAAENLVRNLPTHVLLLNCPIEIKNMAESAGLRAQVLEPATCRPCKAGVLPRTDSGPGGAA*
Ga0070676_108304291	3300005328	Miscanthus Rhizosphere	MYRISRVLETSSVAILKLAGQVTDLDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDAHHKCFLAPSNWNSPLPGGVL*
Ga0070683_1000136494	3300005329	Corn Rhizosphere	MYRISRIFETSCVAILKLAGQVTDFDVNGWADFLKELEGENGRFIVLDFCDVSRVDRKPAEVLLRKLPKHVLLLNCPTGIKNMADSAGLREQVLEPVTGKNPCFFKSFNDSTGGMV*
Ga0070683_1000273192	3300005329	Corn Rhizosphere	MYRISRVFETSCAAILKIAGQITDLDVDGWSEFLKDQENETGRFIILDFCDVSRVDRKAAENLVRNLPTHVLLLNCPTEIKNMAESAGLREQVLEPATCRPCTAGVLPRTDSRPGGAA*
Ga0070690_1009758232	3300005330	Switchgrass Rhizosphere	SRVLETSSVAITKIAGQVTDFDLHGWSDFLKELEGETGRWIVLDFCDVSRVDQKPAELLVRNLPEQVLLLNCPTGIKNMADSAGLRTQVLEPAAGHHPCFLNCNSCNSSFQPDGGGR*
Ga0070690_1012551821	3300005330	Switchgrass Rhizosphere	MYRISRVLETSSVAILKLAGQVTDFDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDAHHKCFLAPSNWNSPLPGGVL*
Ga0070666_112777191	3300005335	Switchgrass Rhizosphere	MYRISTVFETSCVAILKIAGQVTDFDVNGWSEFLKEVKGDTQRHLVLDFCDVSRVDPKASDLLVRNLPKHVLLLNCPIGIRNMADSAGLRGQVLEPAGASSGFPKTTPHSDSVPGEVL*
Ga0070687_1013891811	3300005343	Switchgrass Rhizosphere	MYRISRVLETSSVAITKIAGQVTDFDLHGWSDFLKELEGETGRWIVLDFCDVSRVDRKPAELLVRNLPKQVLLLNCPTGIKNMADSAGLRT
Ga0070661_1018111862	3300005344	Corn Rhizosphere	GQVADSEVEGWSDFLKELAGETGHFIVLDFCDVSRVDRKPAELLVRTLPKHVLLLNCPTGIKNMADSAGFRQQVLEPTAGENSCFLNRNSWNEPIPGGAV*
Ga0070673_1000671662	3300005364	Switchgrass Rhizosphere	MYRISRVLETSSVAITKIAGQVTDFDLHGWSDFLKELEGETSRWIVLDFCDVSRVDQKPAELLVRNLPEQVLLLNCPTGIKNMADSAGLRTQVLEPAAGHHPCFLNCNSCNSSFQPDGGGR*
Ga0070667_1015433462	3300005367	Switchgrass Rhizosphere	GQVTDLDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDAHHKCFLAPSNWNSPLPGGVL*
Ga0070709_100140162	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MYRISRVLETSSVAIVKIAGQVTDFDLSGWSDFLGELEQETGRWIVLDFCDAGRVERTAAELLVGMLPKHVLLLNCSTGIKNMVDSAGLRGQVLEPTTAPGQARPHCLLNLNLLNSAVSGGAV*
Ga0070710_108215661	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	AMYRISRVLETSSVAIVKIAGQVTDFDLSGWSDFLGELEQETGRWIVLDFCDAGRVERTAAELLVGMLPKHVLLLNCSTGIKNMVDSAGLRGQVLEPTTAPGQARPHCLLNLNLLNSAVSGGAV*
Ga0070711_1004607232	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MYRISRVLETSSVAIVKIAGQVTDFDLSGWSEFLGELEQETGRWIVLDFCDAGRVERTAAELLVGMLPKHVLLLNCSTGIKNMVDSAGLRGQVLEPTTAPGQARPHCLLNLNLLNSAVSGGAV*
Ga0068867_1002530701	3300005459	Miscanthus Rhizosphere	VPCIYGCAMYRISTVFETACVEIVKLAGQVTDFDLAGWADFMADLERQDGRWIVLDFCDVSRVDRKPAEMLMRMVPKHVLLLNCPTAIKNMAAARGLCERVLESNRVVVPRITGPEGVSA
Ga0068867_1019202041	3300005459	Miscanthus Rhizosphere	MYRISRIFQTSCVAILKIAGQVADSEVEGWSDFLKELAGETGHFIVLDFCDVSRVDRKPAELLVRTLPKHVLLLNCPTGIKNMADSAGFRQQVLEPTAGENSCFLNRNSWNEPIPGGAV*
Ga0068867_1021195762	3300005459	Miscanthus Rhizosphere	MARAIHEIAMYRISKVFETSCVAILKIAGQVTDSEAGSWSEFLKELKDETGHFIVLDFCDVSRVEGKAAEAVVQNLPRHILLLNCPVGIKNMADSAGL
Ga0070706_1015077582	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MYRISRVLETSSVAIVKIAGQVTDFDLSGWSEFLGELEQETGRWIVLDFCDAGRVERTAAELLVGMLPKHVLLLNCSTGIKNMVDSAGLRGQVLEPTTAPGQARPHCLL
Ga0070684_1005944511	3300005535	Corn Rhizosphere	MYRISRIFETSCVAILKLAGQVTDFDVNGWADFLKELEGENGRFIVLDFCDVSRVDRKPAEVLLRKLPKHVLLLNCPTGIKNMADSAGLREQVLEPVTGQNPCFFKSFNDSTGGMV*
Ga0070697_1007437711	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MYRISRVLETSSVAIVKIAGQVTDFDLSGWSEFLGELEQETGRWIVLDFCDAGRVERTAAELLVGMLPKHVLLLNCSTGIKNMVDSAG
Ga0070695_1015662081	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MYRISTVFETSCVAILKIAGQVTDFDVNGWSEFLKEVKGDTQRHLVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDAHHKCFLAPSNWNSPLPGGVL*
Ga0070693_1010043132	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	ISRVLETSSVAIVKIAGQVTDFDLSGWSEFLGELEQETGRWIVLDFCDAGRVERTAAELLVGMLPKHVLLLNCSTGIKNMVDSAGLRGQVLEPTTAPGQARPHCLLNLNLLNSAVSGGAV
Ga0068855_1000584273	3300005563	Corn Rhizosphere	MYRISKVFETSCVAILKIAGQVTDSEAGSWSEFLKELKDETGHFIVLDFCDVSRVEGKAAEAVVQNLPRHILLLNCPVGIKNMADSAGLREQVLEPGYGQPRRSLGVRLRNESLTGGVV*
Ga0070664_1017204581	3300005564	Corn Rhizosphere	MYRISRIFQTSCVAILKIAGQVADSEVEGWSDFLKELAGETGHFIVLDFCDVSRVDRKPAELLVRTLPKHVLLLNCPTGIKNMADSAGFRQQVLEPTAGENSCFLNRNSWN
Ga0068854_1017337041	3300005578	Corn Rhizosphere	RVFETSCAAILKIAGQITDLDVDGWSEFLKDQENETGRFIILDFCDVSRVDRKAAENLVRNLPTHVLLLNCPIEIKNMAESAGLRAQVLEPATCRPCTAGVLPRTDSRPGGAA*
Ga0070702_1016657812	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	LETSSVALLKLAGQVTDFDLNGWSEFLKELEAEGGRWIVLDFCDVSRVDPKASDLLVRNLPKHVLLLNCPIGIRNMADSAGLRGQVLEPAGASSGFPKTTPHSDSVPGEVL*
Ga0068852_1000022939	3300005616	Corn Rhizosphere	MYRISRVFETSCAAILKIAGQITDLDVDGWSEFLKDQENETGRFIILDFCDVSRVDRKAAENLVRNLPTHVLLLNCPIEIKNMAESAGLRAQVLEPATCRPCKAGALPRTDSGPGGAA*
Ga0068859_1000459872	3300005617	Switchgrass Rhizosphere	MYRISRVLETSSVAILKLAGQVTDLDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDAHHKCFLASSNWNSPLPGGVL*
Ga0068866_104099132	3300005718	Miscanthus Rhizosphere	MYRISRVLETSSVAILKLAGQVTDFDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDR
Ga0068858_1005647102	3300005842	Switchgrass Rhizosphere	MYRISRVLETSCVAVVKIAGQVTDFELSGWSDFLKELEGEPGRSIVLDFCDVSRVDRKATEILVGILPKHVLLLNCPITIKNMAAARGLGEQVLESNCRVTPQGGAV*
Ga0068858_1011275932	3300005842	Switchgrass Rhizosphere	MYRISRVLETSSVAITKIAGQVTDFDLHGWSDFLKELEGETGRWIVLDFCDVSRVDQKPAELLVRNLPEQVLLLNCPTGIKNMADSAGLRTQVLEPAAGHHPCFLNCNSCNSSFQPDGGGR*
Ga0068860_1006227082	3300005843	Switchgrass Rhizosphere	MYRISRVLETSSVAILKLAGQVTDLDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDAHHKCFLAPSNWNSPLPG
Ga0097621_1002053931	3300006237	Miscanthus Rhizosphere	MYRISRIFETSCVAILKLAGQVTDLDVTGWEDFLKDLAAETGHSIVLDFCDVCRVDRKPAELLVRMLPEHVLLLNCPTGIKNMADSAGLRRQVLEPSADLNPCGPARSAWNKSAPGGVA*
Ga0068871_1003105201	3300006358	Miscanthus Rhizosphere	VLQTSCVSILKIAGQVSDLDIEGWSDFLKELQAETGRFVVLDFCDASRVDRKPAELLVRTLPKHVLLLNCPTVIKNMAESAGFRAQVLEPAAGENSCFLKRNSWNAPIPGGAL*
Ga0068871_1008191781	3300006358	Miscanthus Rhizosphere	MYRISRVLETSSVALLKLAGQVTDFDLNGWSEFLKELEAEGGRWIVLDFCDVSRVDRKPAELLVRTLPKHVLLLNCPTGIKNMADSAGLRDRVLEPAGCPGDA
Ga0068871_1014612251	3300006358	Miscanthus Rhizosphere	MYRISRVLETPSVAITKIAGQVTDFDLGGWSDFLKELEGETGRWIVLDFCDVSRVDQKPAELLVRTLPQQVLLLNCPTGIKNMADSAGLRAQVLEPAGGKHPCFLNRNPWNSSFQPGGGVR*
Ga0079222_100645762	3300006755	Agricultural Soil	MYRISKVFETSCVAILKIAGQVTDSEVGSWSEFLKELKDETGHFIVLDFCDVSRVEGKAAEAVVQNLPRHILLLNCPVGIKNMADSAGLREQVLEPGYGQPRRSLGVRLRNESLTGGVV*
Ga0068865_1016539292	3300006881	Miscanthus Rhizosphere	MYRISRVLETSSVAILKLAGQVTDLDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDA
Ga0105245_100440352	3300009098	Miscanthus Rhizosphere	MYRISRVLQTSCVSILKIAGQVSDLDIEGWSDFLKELQAETGRFVVLDFCDASRVDRKPAELLVRTLPKHVLLLNCPTVIKNMAESAGFREQVLEPAAGENSCFLKRNSWNAPIPGGAL*
Ga0105245_104479062	3300009098	Miscanthus Rhizosphere	QVTDFDLHGWSDFLKELEGETGRWIVLDFCDVSRVDRKPAELLVRNLPKQVLLLNCPTGIKNMADSAGLRTQVLEPASGQHPCFLNCNPCNSSFQRDGGTR*
Ga0105245_106107221	3300009098	Miscanthus Rhizosphere	MARAIHEIAMYRISKVFETSCVAILKIAGQVTDSEAGSWSEFLKELKDETGHFIVLDFCDVSRVEGKAAEAVVQNLPRHILLLNCPVGIKNMADSAGLREQVLEPGDGQSRRSLGVRLRNESLTGGVV*
Ga0105245_106523752	3300009098	Miscanthus Rhizosphere	MYRISRIFQTSCVAIVKLAGQVTDLDVSGWSDFLTDLEGETGHFIVLDFCDVCRVDRKPAELLVRRLPKHVLLLNCPTGIKNMADSAGLREQVLEPGAPQNPCLPDRTRRDDSVPGGMV*
Ga0105245_120678771	3300009098	Miscanthus Rhizosphere	MYRISRVLETSSVAILKLAGQVTDFDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDAHHKCFLASSNWNSPLPGGVL*
Ga0105243_100655362	3300009148	Miscanthus Rhizosphere	MYRISRVLETSSVAILKLAGQVTDLDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDAHHKCFLAPSNWNSPPPGGVL*
Ga0105241_100380632	3300009174	Corn Rhizosphere	MARAIHEIAMYRISKVFETSCVAILKIAGQVTDSEAGSWSEFLKELKDETGHFIVLDFCDVSRVEGKAAEAVVQNLPRHILLLNCPVGIKNMADSAGLREQVLEPGYGQPRRSLGVRLRNESLTGGVV*
Ga0105241_100696532	3300009174	Corn Rhizosphere	VKIAGQVTDFDLSGWSDFLGELEQETGRWIVLDFCDAGRVERTAAELLVGMLPKHVLLLNCSTGIKNMVDSAGLRGQVLEPTTAPGQARPHCLLNLNLLNNALSGGAV*
Ga0105241_119175302	3300009174	Corn Rhizosphere	MYRISRIFETSCVAILKLAGQVTDFDVNGWSDFLKELEGETGHFIVLDFCDISRVDRKPAELLVHTLPKHVLLLNCPTGIKNMVDSAGLREQVLEPSTGQSPCFFKPFNDSIGGAV*
Ga0105242_1000489110	3300009176	Miscanthus Rhizosphere	MYRISRVLETSSVAILKLAGQVTDLDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDAHHKCFLAPSNWNSP
Ga0105242_101971242	3300009176	Miscanthus Rhizosphere	MYRISRIFQTSCVAILKIAGQVTDSEVEGWSDFLKELAGETGHFIVLDFCDVSRVDRKPAELLVRTLPKHVLLLNCPTGIKNMADSAGFRQQVLEPTAGENSCFLNRNSWNEPIPGGAV*
Ga0105248_106264292	3300009177	Switchgrass Rhizosphere	MYRISRVLETSSVAITKIAGQVTDFDLHGWSDFLKELEGETGRWIVLDFCDVSRVDRKPAELLVRNLPKQVLLLNCPTGIKNMADSAGLRTQVLEPASGQHPCFLNCNPCNSSFQRDGGTR*
Ga0105237_100511761	3300009545	Corn Rhizosphere	MYRISRVFETSCAAILKIAGQITDLDVDGWSEFLKDQENETGRFIILDFCDVSRVDRKAAENLVRNLPTHVLLLNCPIEIKNMAESAGLRAQVLEPATCRPCKAGVLPRTDS
Ga0105239_100230371	3300010375	Corn Rhizosphere	MYRISRVFETSCAAILKIAGQITDLDVDGWSEFLKDQENETGRFIILDFCDVSRVDRKAAENLVRNLPTHVLLLNCPIEIKNMAESAGLR
Ga0134121_100524082	3300010401	Terrestrial Soil	VKIAGQVTDFDLSGWSDFLGELEQETGRWIVLDFCDAGRVERTAAELLVGMLPKHVLLLNCSTGIKNMVDSAGLRGQVLEPTTAPGQARPHCLLNLNLLNSAVSGGAV*
Ga0134123_105796452	3300010403	Terrestrial Soil	MYRISRVLETSSVAILKLAGQVTDLDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDAHHKCFLAS
Ga0105246_124540882	3300011119	Miscanthus Rhizosphere	AGQVTDFDLGGWSDFLKELEGETGRWIVLDFCDVARVDQKPAELLVRNLPEQVLLLNCPTGIKNMADSAGLRAQVLEPAGGKHPCFLNRNPWNSSFQPGGGVR*
Ga0150983_122913591	3300011120	Forest Soil	TDFDLSFWSSFLKELEAESDRWIVLDFCDVSCVGRKSAEMLVHTLPKNVLLLNCPIGIKNMADSAGLRSQVLEPPSAQAPCFLSPNAFDISAAGGVV*
Ga0150983_133772031	3300011120	Forest Soil	SRIFETSCAAIIKLAGQVTDFDLSFWSSFLKELEAESERWIVLDFCDVSCVGRKSAEMLVQSLPKNVLLLNCPVGIKNMAESAGLRSHVLEPPSAQPPCFVSPNALNISVAGGVV*
Ga0150985_1159272611	3300012212	Avena Fatua Rhizosphere	RIFETSCVAILKLAGQVTDFDVNGWTDFLKELEGETGRFLVLDFCDVSRVDRKPSELLVRTLPKHVLLLNCPTGIKNMADSAGLREQVLEPSTAPTPCFFKPSNDSVGGAA*
Ga0150984_1184406132	3300012469	Avena Fatua Rhizosphere	IFETSCVAILKLAGQVTDFDVNGWTDFLKELEGETGRFLVLDFCDVSRVDRKPSELLVRTLPKHVLLLNCPTGIKNMADSAGLREQVLEPSTAPTPCFFKPSNDSVGGAA*
Ga0157374_110831232	3300013296	Miscanthus Rhizosphere	MYRISRIFETSCVAILKLAGQVTDLDVTGWEDFLKDLAAETGHSIVLDFCDVCRVDRKPAELLVRMLPEHVLLLNCPTGIKN
Ga0157374_111248132	3300013296	Miscanthus Rhizosphere	MYRISRIFETSCVAILKLAGQVTDFDVDGWTDFLKELEGENGRFIVLDFCDVSRVDRKPAEVLLRKLPKHVLLLNCPTGIKNMADSAGLREQVLEPVTGQNPCFFKSFNDSTGGVV*
Ga0163162_132821681	3300013306	Switchgrass Rhizosphere	MARAIHEIAMYRISKVFETSCVAILKIAGQVTDSEAGSWSEFLKELKDETGHFIVLDFCDVSRVEGKAAEAVVQNLPRHILLLNCPVGIKNMADSAGLREQVLEPG
Ga0157372_112739532	3300013307	Corn Rhizosphere	MYRISRIFETSCVAILKLAGQVTDFDVNGWADFLKELEGENGRFIVLDFCDVSRGDRKPAEVLLRKLPKHVLLLNCPTGIKNMADSAGLREQVLEPVTGKNPCFFKSFNDSTGGMV*
Ga0157372_112995262	3300013307	Corn Rhizosphere	MARAIHEIAMYRISKVFETSCVAILKIAGQVTDSEAGSWSEFLKELKDETGHFIVLDFCDVSRVEGKAAEAVVQNLPRHILLLNCPVGIKNMADSAGLR
Ga0157375_119809502	3300013308	Miscanthus Rhizosphere	TDFDLGGWSDFLKELEGETGRWIVLDFCDVSRVDQKPAELLVRTLPQQVLLLNCPTGIKNMADSAGLRAQVLEPAGGKHPCFLNRNPWNSSFQPGGGVR*
Ga0163163_108643322	3300014325	Switchgrass Rhizosphere	MYRISRVLETPSVAITKIAGQVTDFDLGGWSDFLKELEGETGRWIVLDFCDVSRVDQKPAELLVRNLPEQVLLLNCPTGIKNMADSAGLRTQVLEPAAGHHPCFLNCNSCNSSFQPDGGGR*
Ga0163163_120936441	3300014325	Switchgrass Rhizosphere	MYRISRIFQTSCVAILKIAGQVTDSEVEGWSDFLKELAGETGHFIVLDFCDVSRVDRKPAELLVRTLPKHVLLLNCPTGIKNMADSAGF
Ga0157376_122879321	3300014969	Miscanthus Rhizosphere	MYRISRVLQTSCVSILKIAGQVIDLDIEGWSDFLKELQAETGRFVVLDFCDASRVDRKPAELLVRTLPKHVLLLNCPTVIKNMAESAGFREQVLEPAAGENSCFLKRNSWNAPIPGGAL*
Ga0180106_12584301	3300019212	Groundwater Sediment	ETASVAILKIAGQVTDFDVSGWSEFLNELDGESGRWIVLDFCDVSRVERKPSALLVRMLPKHVLLLNCPIGIRNMADSAGMRGQVLEPAAGQHSCLLNLTPRLGIVTPQLSQ
Ga0206355_14052521	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	ISRVFETSCAAILKIAGQITDLDVDGWSEFLKDQENETGRFIILDFCDVSRVDRKAAENLVRNLPTHVLLLNCPTEIKNMAESAGLRAQVLEPATCRPCKAGALPRTDSGPGGAA
Ga0210385_107516991	3300021402	Soil	MYRISRIFETSCAAIIKVAGQVTDFDLSFWSSFLKELEAESERWIVLDFCDVNCVGRKSAEMLVQTLPQNVLLLNCPIGIKNMADSAGLRSQVLEPPSAQAPCFLSPNALNISVAGGVV
Ga0182009_100736132	3300021445	Soil	MYRISKVFETSCVAILKIAGHVTDSEVGSWSEFLKELKDETGHFIVLDFCDVSRVEGKAAEAVVQNLPRHILLLNCPVGIKNMADSAGLREQVLEPGYGQPRRSLGVRLRNESLTGGVV
Ga0210402_102938342	3300021478	Soil	MYRISRIFETSCAAIIKLAGQVTDFDLSFWSSFLKELEAESERWIVLDFCDVSCVGRKSAEMLVQSLPKNVLLLNCPVGIKNMAESAGLRSHVLEPPSAQPPCFVSPNALNISVAGGVV
Ga0242641_10072261	3300022499	Soil	IFETSCAAIIKVAGQVTDFDLSFWSSFLKELEAESERWIVLDFCDVSCVGRKSAEMLVQTLPQNVLLLNCPIGIKNMADSAGLRSQVLEPPSAQAPCFLSPNALNVSVAGGVV
Ga0242643_1131642	3300022500	Soil	RIFETSCAAIIKVAGQVTDFDLSFWSSFLKELEAESERWIVLDFCDVNRVGRKSAEMLVQTLPQNVLLLNCPIGIKNMADSAGLRSQVLEPPSAQAPCFLSPNALNISVAGGVV
Ga0242650_10137452	3300022503	Soil	QTSCVAILKIAGQVTDFDLNGWSEFLKELEAETGHYIVLDFCDVSRVDWKPSELLVRKLPKNVLLLNCPTGIKNMADSAGLREQVLEPSTGQNPYFLNAGDLNVSGGVV
Ga0242648_10038481	3300022506	Soil	RIFETSCAAIIKVAGQVTDFDLSFWSSFLKELEAESERWIVLDFCDVNCVGRKSAEMLVQTLPQNVLLLNCPIGIKNMADSAGLRSQVLEPPSAQAPCFLSPNALNISVAGGVV
Ga0242648_10747421	3300022506	Soil	SRIFETSCAAIIKVAGQVTDFDLSFWSSFLKELEAESERWIVLDFCDVSCVGRKSAEMLVQTLPQNVLLLNCPIGIQNMADSAGLRSQVLEPPSAQAPCFLSPNALNVSVAGGVV
Ga0222728_10464532	3300022508	Soil	GQVTDFDLSFWSSFLKELEAESERWIVLDFCDVSCVGRKSAEMLVQSLPKNVLLLNCPVGIKNMAESAGLRSHVLEPPSAQPPCFVSPNALNISVAGGVV
Ga0222728_10526991	3300022508	Soil	RIFETSSSAIVKVAGQVTDFDLSFWSSFLKELEAESDRWIVLDFCDVSCVGRKSAEMLVHTLPKNVLLLNCPIGIKNMADSAGLRSQVLEPPSAQAPCFLSPNAFDISAAGGVV
Ga0242652_10169821	3300022510	Soil	RIFETSCAAIIKLAGQVTDFDLSFWSSFLKELEAESERWIVLDFCDVSCVGRKSAEMLVQSLPKNVLLLNCPVGIKNMAESAGLRSHVLEPPSAQPPCFVSPNALNISVAGGVV
Ga0242651_10104752	3300022511	Soil	DFDLSFWSSFLKELEAESERWIVLDFCDVSSVGRKSAEMLVQTLPQNVLLLNCPIGIKNMADSAGLRSQVLEPPSAQAPCFLSPNALNVSVAGGVV
Ga0242656_11200591	3300022525	Soil	RVFETSCAAIVKLAGQVNDADLSFWSSFLRELEAEAWRWIVLDFCDVSCVGRKSAEMLIQTLPKNVLLLNCPIGIKNMADSSGMRSQVLEPPSEQPVCFLSPNALNLSLAGGVI
Ga0242658_10181901	3300022530	Soil	SRIFETSCAAIIKVAGQVTDFDLSFWSSFLKELEAESERWIVLDFCDVSCVGRKSAEMLVQTLPQNVLLLNCPIGIKNMADSAGLRSQVLEPPSAQAPCFLSPNALNVSVAGGVV
Ga0242662_100209861	3300022533	Soil	RISRIFETSCAAIIKLAGQVTDFDLSFWSSFLKELEAESERWIVLDFCDVSCVGRKSAEMLVQSLPKNVLLLNCPVGIKNMAESAGLRSHVLEPPSAQPPCFVSPNALNISVAGGVV
Ga0242661_10172791	3300022717	Soil	AAIIKLAGQVTDFDLSFWSSFLKELEAESERWIVLDFCDVSCVGRKSAEMLVQSLPKNVLLLNCPVGIKNMAESAGLRVETNNRYSAIGRWCLD
Ga0242657_10422361	3300022722	Soil	FETSCAAIVKLAGQVSDADLSFWSSFLRELEAEAWRWIVLDFCDVSCVGRKSAEMLIQTLPKNVLLLNCPIGIKNMADSSGMRSQVLEPPSEQPVCFLSPNALNLSLAGGVI
Ga0207642_102692822	3300025899	Miscanthus Rhizosphere	MYRISTVLETCSVAIIKIAGQVKDFDLPGWSDFLKELENDTGRWIVLDFCDASRVDRKPAELLVRNLREHVLLLNCPNGIKNMAESGGLRGQVLEPATGQDRCFLDRNIWN
Ga0207705_106964201	3300025909	Corn Rhizosphere	MYRISRVFETSCAAILKIAGQITDLDVDGWSEFLKDQENETGRFIILDFCDVSRVDRKAAENLVRNLPTHVLLLNCPIEIKNMAESAGLRAQVLEPATCRPCKAGVLPRTDSGPGGAA
Ga0207684_108763202	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MYRISRVLETSSVAIVKIAGQVTDFDLSGWSEFLGELEQETGRWIVLDFCDAGRVERTAAELLVGMLPKHVLLLNCSTGIKNMVDSAGLRGQVLEPTTAPGRSNWCR
Ga0207654_100438723	3300025911	Corn Rhizosphere	MYRISRVFETSCAAILKIAGQITDLDVDGWSEFLKDQENETGRFIILDFCDVSRVDRKAAENLVRNLPTHVLLLNCPTEIKNMAESAGLREQVLEPATCRPCTAGVLPRTDSRPGGAA
Ga0207654_101287092	3300025911	Corn Rhizosphere	MYRISKVFETSCVAILKIAGQVTDSEAGSWSEFLKELKDETGHFIVLDFCDVSRVEGKAAEAVVQNLPRHILLLNCPVGIKNMADSAGLREQVLEPGYGQPRRSLGVRLRNESLTGGVV
Ga0207654_106437932	3300025911	Corn Rhizosphere	CFKVNAMYRISRVLETSSVAIVKIAGQVTDFDLSGWSEFLGELEQETGRWIVLDFCDAGRVERTAAELLVGMLPKHVLLLNCSTGIKNMVDSAGLRGQVLEPTTAPGQARPHCLLNLNLLNNALSGGAV
Ga0207671_100228292	3300025914	Corn Rhizosphere	MYRISRVFETSCAAILKIAGQITDLDVDGWSEFLKDQENETGRFIILDFCDVSRVDRKAAENLVRNLPTHVLLLNCPIEIKNMAESAGLRAQVLEPATCRPCKAGVLPRTDSRPGGAA
Ga0207671_109450501	3300025914	Corn Rhizosphere	MYRISRIFQTSCVAILKIAGQVADSEVEGWSDFLKELAGETGHFIVLDFCDVSRVDRKPAELLVRTLPKHVLLLNCPTGIKNMADSAGFRQQVLEPTAGENSCFLNRNSWNEPIPGGAV
Ga0207671_111636291	3300025914	Corn Rhizosphere	MARAIHEIAMYRISKVFETSCVAILKIAGQVTDSEAGSWSEFLKELKDETGHFIVLDFCDVSRVEGKAAEAVVQNLPRHILLLNCPVGIKNMADSAGLREQVLEPGYGQPRRSLGVRLRNESLTGGVV
Ga0207663_104258372	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MYRISRVLETSSVAIVKIAGQVTDFDLSGWSEFLGELEQETGRWIVLDFCDAGRVERTAAELLVGMLPKHVLLLNCSTGIKNMVDSAGLRGQVLEPTTAPGQARPHCLLNLNLLNSAVSGGAV
Ga0207657_101307992	3300025919	Corn Rhizosphere	MYRISRVFETSCAAILKIAGQITDLDVDGWSEFLKDQENETGRFIILDFCDVSRVDRKAAENLVRNLPTHVLLLNCPIEIKNMAESAGLRAQVLEPATCRPCTAGVLPRTDSRPGGAA
Ga0207687_117359311	3300025927	Miscanthus Rhizosphere	MYRISRVLETSCVAVVKIAGQVTDFELSGWSDFLKELEGEPGRSIVLDFCDVSRVDRKATEILVGILPKHVLLLNCPISIKNMAAARGLGE
Ga0207686_103099082	3300025934	Miscanthus Rhizosphere	MYRISRIFQTSCVAILKIAGQVTDSEVEGWSDFLKELAGETGHFIVLDFCDVSRVDRKPAELLVRTLPKHVLLLNCPTGIKNMADSAGFRQQVLEPTAGENSCFLNRNSWNEPIPGGAV
Ga0207704_106725462	3300025938	Miscanthus Rhizosphere	MYRISRVLETSSVAILKLAGQVTDLDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDAHH
Ga0207711_109219081	3300025941	Switchgrass Rhizosphere	MYRISRVLETSSVAITKIAGQVTDFDLHGWSDFLKELEGETGRWIVLDFCDVSRVDRKPAELLVRNLPKQVLLLNCPTGIKNMADSAGLRTQVLEPASGQHPCFLNCNPCNSSFQRDGGT
Ga0207689_114907891	3300025942	Miscanthus Rhizosphere	MYRISRVLETPSVAITKIAGQVTDFDLGGWSDFLKELEGETGRWIVLDFCDVSRVDQKPAELLVRTLPKQVLLLNCPTGIKNMADSAGLRTQVLEPASGQHPCFLNCNPCNSSFQRDGGT
Ga0207661_102682361	3300025944	Corn Rhizosphere	MYRISRVFETSCAAILKIAGQITDLDVDGWSEFLKDQENETGRFIILDFCDVSRVDRKAAENLVRNLPTHVLLLNCPIEIKNMAESAGLRAQVLEPATCR
Ga0207661_106623021	3300025944	Corn Rhizosphere	MYRISRIFETSCVAILKLAGQVTDFDVNGWADFLKELEGENGRFIVLDFCDVSRVDRKPAEVLLRKLPKHVLLLNCPTGIKNMADSAGLREQVLE
Ga0207679_118536211	3300025945	Corn Rhizosphere	MYRISRIFQTSCVAILKIAGQVADSEVEGWSDFLKELAGETGHFIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDAHHKCFLAPSNWN
Ga0207651_102925162	3300025960	Switchgrass Rhizosphere	MYRISRVLETSSVAITKIAGQVTDFDLHGWSDFLKELEGETSRWIVLDFCDVSRVDQKPAELLVRNLPEQVLLLNCPTGIKNMADSAGLRTQVLEPAAGHHPCFLNCNSCNSSFQPDGGG
Ga0207651_117001542	3300025960	Switchgrass Rhizosphere	MYRISRVLETSSVAILKLAGQVTDLDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPA
Ga0207658_114038731	3300025986	Switchgrass Rhizosphere	GQVTDLDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAGGQGDAHHKCFLAPSNWNSPLPGGVL
Ga0207677_122227561	3300026023	Miscanthus Rhizosphere	MYRISRVLETPSVAITKIAGQVTDFDLGGWSDFLKELEGETGRWIVLDFCDVSRVDQKPAELLVRTLPQQVLLLNCPTGIKNMADSAGLRTQVLEPAAGHHPCFLNCNSCNSSFQPDGGG
Ga0207703_102673082	3300026035	Switchgrass Rhizosphere	MYRISRVLETSCVAVVKIAGQVTDFELSGWSDFLKELEGEPGRSIVLDFCDVSRVDRKATEILVGILPKHVLLLNCPITIKNMAAARGLGEQVLESNCRV
Ga0207648_101528192	3300026089	Miscanthus Rhizosphere	MYRISTVFETACVEIVKLAGQVTDFDLAGWADFMADLERQDGRWIVLDFCDVSRVDRKPAEMLMRMVPKHVLLLNCPTAIKNMAAARGLCERVLESNRVVVPRITGPEGVSA
Ga0207648_108994631	3300026089	Miscanthus Rhizosphere	MYRISRIFQTSCVAILKIAGQVADSEVEGWSDFLKELAGETGHFIVLDFCDVSRVDRKPAELLVRTLPKHVLLLNCPTGIKNMADSAGLRTQVLEPAAGHHPCFLNCNSCNSSFQPDGGG
Ga0207675_1008943401	3300026118	Switchgrass Rhizosphere	MYRISRVLETSSVAILKLAGQVTDLDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMA
Ga0268264_101217222	3300028381	Switchgrass Rhizosphere	MYRISRVLETSSVAILKLAGQVTDLDLNGWSEFLTELEAEAGRWIVLDFCDVSRVDRKPAEMLIGNLPKHALLLNCPTGVKNMADSAGLRDRVLEPAAGPL
Ga0222748_11187431	3300029701	Soil	FETSSSAIVKVAGQVTDFDLSFWSSFLKELEAESDRWIVLDFCDVSCVGRKSAEMLVHTLPKNVLLLNCPIGIKNMADSAGLRSQVLEPPSAQAPCFLSPNAFDISAAGGVV
Ga0170824_1205950222	3300031231	Forest Soil	MSRVFETSSVVIVKIAGQVTDFDMNGWSDFLKDLEREAVRWIVLDFCDTARVDRKPAELLVRNLSKHLLLLNCPTGIKNMADSAGLRGQVLEPPTGQGQSRPHCFLNVNLWNGSLSGGAV
Ga0170820_167363402	3300031446	Forest Soil	TSSVVIVKIAGQVTDFDMNGWSDFLKDLEREAVRWIVLDFCDTARVDRKPAELLVRNLSKHLLLLNCPTGIKNMADSAGLRGQVLEPPTGQGQSRPHCFLNVNLWNGSLSGGAV
Ga0310813_121515671	3300031716	Soil	MTRAVIIIMYRIGRVLETSSVAIVKVAGQVTDFDLSGWSDFLKELEAETGRWIVLDFCDVSRVDQKPAELLVRTLPQQVLLLNCPTGIKNMADSAGLRAQVLE
Ga0307469_112943742	3300031720	Hardwood Forest Soil	MYRISRVFETSSVVIVKIAGQVTDFDLGGWSDFLKDLEGETVRWVVLDFCDTARVDRKAAELLVRNLSKHLLLLNCPTGIKNMADSAGLRGQVLEPASGPGQVRPHCFLNVNLWNSSLSGGAV
Ga0310810_101477472	3300033412	Soil	MYRISRVLETSSVAIVKLAGQVTDFDLSGWSEFLGELEAETGRWIVLDFCDVSRVDRKPAELLVRTLPKHVLLLNGPTGIKNMADSAGLRDRVLEPAGCPGDAHHKCCLDLSPSNNPVPGGVL
Ga0310810_102335722	3300033412	Soil	MYRISKIFDVSGWSDFLMELEGDTGHVIVLDFCDVSRVDRKPAELLVRRLPKHVLLLNCPTGIKNMADSAGLREQVLEPVTPQNPCLPDRNRRDDSVPGGMV
Ga0310810_110519941	3300033412	Soil	ISKVFETSCVAILKIAGQVTDSEVGSWSEFLKELKDETGHFIVLDFCDVSRVEGKAAEAVVQNLPRHILLLNCPVGIKNMADSAGLREQVLEPGDGQSRRSLGVRLWNESLTGGVV
Ga0310811_110039661	3300033475	Soil	MYRISKVFETSCVAILKIAGHVTDSEVGSWSEFLKELKDETGHFIVLDFCDVSRVEGKAAEAVVQNLPRHILLLNCPVGIKNMADSAGLREQVLEPGDGQSRRSLGVRLRNDSLTGGVV
Ga0370545_165212_1_327	3300034643	Soil	ALVKIAGQVADADLSGWSDCLKELESETGRWIVLDFCDVSRVDQKPAELLFRSLPKHVLLLNCPTGIKNMADSAGLRGQVLEPSTGQHPCFLRLHPRASSIRPEGGAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F066885

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences