Metagenome / Metatranscriptome Family F067027

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067027
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	68 residues
Representative Sequence	MTVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVLLQQRLAEVLAEQDSRSRLHEANGQA
Number of Associated Samples	107
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.00 %
% of genes near scaffold ends (potentially truncated)	31.75 %
% of genes from short scaffolds (< 2000 bps)	84.92 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.349 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.429 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.619 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.13% β-sheet: 0.00% Coil/Unstructured: 47.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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SCOP family	SCOP domain	Representative PDB	TM-score
a.7.8.1: GAT domain	d1wrda1	1wrd	0.83753
a.25.1.0: automated matches	d3b3ha_	3b3h	0.78749
a.87.1.1: DBL homology domain (DH-domain)	d1ki1b1	1ki1	0.78468
f.15.1.1: Small-conductance potassium channel	d4j9yb1	4j9y	0.78446
a.87.1.1: DBL homology domain (DH-domain)	d1foea1	1foe	0.78417

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF13560	HTH_31	32.54
PF04149	DUF397	3.97
PF00293	NUDIX	3.97
PF00440	TetR_N	1.59
PF13304	AAA_21	1.59
PF01548	DEDD_Tnp_IS110	1.59
PF01225	Mur_ligase	0.79
PF04471	Mrr_cat	0.79
PF00149	Metallophos	0.79
PF00583	Acetyltransf_1	0.79
PF04055	Radical_SAM	0.79
PF13476	AAA_23	0.79
PF09369	MZB	0.79
PF00005	ABC_tran	0.79
PF03235	DUF262	0.79
PF01565	FAD_binding_4	0.79
PF07929	PRiA4_ORF3	0.79
PF13391	HNH_2	0.79
PF13193	AMP-binding_C	0.79
PF12051	DUF3533	0.79
PF08897	DUF1841	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.59
COG0769	UDP-N-acetylmuramyl tripeptide synthase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG0770	UDP-N-acetylmuramyl pentapeptide synthase	Cell wall/membrane/envelope biogenesis [M]	0.79
COG0773	UDP-N-acetylmuramate-alanine ligase MurC and related ligases, MurC/Mpl family	Cell wall/membrane/envelope biogenesis [M]	0.79
COG1479	DNAse/DNA nickase specific for phosphorothioated or glycosylated phage DNA, GmrSD/DndB/SspE family, contains DUF262 and HNH nuclease domains	Defense mechanisms [V]	0.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.35 %
Unclassified	root	N/A	43.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.35 %
Unclassified	root	N/A	43.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.35 %
Unclassified	root	N/A	43.65 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.00 %
Unclassified	root	N/A	43.65 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.00 %
Unclassified	root	N/A	43.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.65 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	40.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.65 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7.14 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	3.17 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.17 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.17 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.17 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.65 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.17 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	3.17 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.17 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	3.17 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	3.17 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.59 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.65 %
Actinocatenispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	3.17 %
Actinocorallia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinocorallia	3.17 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	3.17 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.17 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Arachnia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Arachnia	0.79 %
Sphaerisporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.65 %
unclassified Actinocorallia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinocorallia → unclassified Actinocorallia	3.17 %
Mycobacterium simiae complex	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex	3.17 %
Actinocatenispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	3.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.17 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
unclassified Sphaerisporangium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium	0.79 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.79 %
Arachnia propionica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Arachnia → Arachnia propionica	0.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.65 %
Mycobacterium parmense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium parmense	3.17 %
Actinocorallia sp. API 0066	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinocorallia → unclassified Actinocorallia → Actinocorallia sp. API 0066	3.17 %
Actinocatenispora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	3.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.17 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.59 %
Streptomyces sp. S10(2018)	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. S10(2018)	0.79 %
Sphaerisporangium sp. NEAU-ZS1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1	0.79 %
Arachnia propionica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Arachnia → Arachnia propionica	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02G7M9Z	Not Available	509	Open in IMG/M
3300000956\|JGI10216J12902_118259807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1316	Open in IMG/M
3300005337\|Ga0070682_100187292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium parmense	1450	Open in IMG/M
3300005345\|Ga0070692_10176853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1234	Open in IMG/M
3300005366\|Ga0070659_101565078	Not Available	588	Open in IMG/M
3300005434\|Ga0070709_10262392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1248	Open in IMG/M
3300005434\|Ga0070709_10840514	Not Available	723	Open in IMG/M
3300005436\|Ga0070713_101528782	Not Available	648	Open in IMG/M
3300005445\|Ga0070708_100078438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2985	Open in IMG/M
3300005445\|Ga0070708_100792945	Not Available	891	Open in IMG/M
3300005602\|Ga0070762_10405395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinocorallia → unclassified Actinocorallia → Actinocorallia sp. API 0066	879	Open in IMG/M
3300005610\|Ga0070763_10853805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Arachnia → Arachnia propionica	540	Open in IMG/M
3300005614\|Ga0068856_100141721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium parmense	2411	Open in IMG/M
3300005843\|Ga0068860_102331420	Not Available	556	Open in IMG/M
3300005950\|Ga0066787_10092542	Not Available	635	Open in IMG/M
3300006173\|Ga0070716_101387861	Not Available	571	Open in IMG/M
3300006237\|Ga0097621_100449717	Not Available	1160	Open in IMG/M
3300006574\|Ga0074056_10453228	Not Available	651	Open in IMG/M
3300006755\|Ga0079222_11567690	Not Available	622	Open in IMG/M
3300006804\|Ga0079221_11463470	Not Available	546	Open in IMG/M
3300006871\|Ga0075434_101838139	Not Available	612	Open in IMG/M
3300006903\|Ga0075426_10801381	Not Available	709	Open in IMG/M
3300006914\|Ga0075436_101448806	Not Available	521	Open in IMG/M
3300009090\|Ga0099827_10355439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1247	Open in IMG/M
3300009093\|Ga0105240_11542469	Not Available	696	Open in IMG/M
3300009137\|Ga0066709_103693185	Not Available	555	Open in IMG/M
3300009143\|Ga0099792_10501513	Not Available	760	Open in IMG/M
3300009162\|Ga0075423_11612543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300009177\|Ga0105248_13388784	Not Available	506	Open in IMG/M
3300009545\|Ga0105237_11353441	Not Available	718	Open in IMG/M
3300009623\|Ga0116133_1048104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1056	Open in IMG/M
3300009623\|Ga0116133_1201345	Not Available	535	Open in IMG/M
3300009672\|Ga0116215_1066719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	1624	Open in IMG/M
3300009700\|Ga0116217_10550036	Not Available	722	Open in IMG/M
3300009762\|Ga0116130_1225154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300010371\|Ga0134125_10872656	Not Available	989	Open in IMG/M
3300010371\|Ga0134125_11640968	Not Available	700	Open in IMG/M
3300010373\|Ga0134128_10388857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium parmense	1558	Open in IMG/M
3300012096\|Ga0137389_11564078	Not Available	555	Open in IMG/M
3300012198\|Ga0137364_10060654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2554	Open in IMG/M
3300012199\|Ga0137383_10000669	All Organisms → cellular organisms → Bacteria	18494	Open in IMG/M
3300012199\|Ga0137383_10173225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1581	Open in IMG/M
3300012200\|Ga0137382_10341257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1050	Open in IMG/M
3300012201\|Ga0137365_10019717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5248	Open in IMG/M
3300012201\|Ga0137365_10023311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4795	Open in IMG/M
3300012206\|Ga0137380_10647045	Not Available	921	Open in IMG/M
3300012207\|Ga0137381_10023084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4943	Open in IMG/M
3300012207\|Ga0137381_11321486	Not Available	614	Open in IMG/M
3300012207\|Ga0137381_11344739	Not Available	607	Open in IMG/M
3300012208\|Ga0137376_10844849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	787	Open in IMG/M
3300012208\|Ga0137376_11455371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300012209\|Ga0137379_10048437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4097	Open in IMG/M
3300012349\|Ga0137387_10684672	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300012351\|Ga0137386_10015958	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5048	Open in IMG/M
3300012357\|Ga0137384_10149628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Sphaerisporangium → unclassified Sphaerisporangium → Sphaerisporangium sp. NEAU-ZS1	1954	Open in IMG/M
3300012357\|Ga0137384_10837955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	743	Open in IMG/M
3300012357\|Ga0137384_11188826	Not Available	607	Open in IMG/M
3300012359\|Ga0137385_10083781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2831	Open in IMG/M
3300012359\|Ga0137385_10920327	Not Available	723	Open in IMG/M
3300012532\|Ga0137373_10587679	Not Available	841	Open in IMG/M
3300012918\|Ga0137396_10231379	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300012961\|Ga0164302_11080125	Not Available	632	Open in IMG/M
3300012989\|Ga0164305_12158120	Not Available	512	Open in IMG/M
3300013308\|Ga0157375_10951193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium simiae complex → Mycobacterium parmense	1001	Open in IMG/M
3300014969\|Ga0157376_12729441	Not Available	534	Open in IMG/M
3300015372\|Ga0132256_101627418	Not Available	755	Open in IMG/M
3300015374\|Ga0132255_100415396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1962	Open in IMG/M
3300017946\|Ga0187879_10066584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2097	Open in IMG/M
3300017946\|Ga0187879_10093477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1729	Open in IMG/M
3300017948\|Ga0187847_10199637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1090	Open in IMG/M
3300018034\|Ga0187863_10122557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1453	Open in IMG/M
3300018035\|Ga0187875_10342510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	804	Open in IMG/M
3300018037\|Ga0187883_10084632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1657	Open in IMG/M
3300018038\|Ga0187855_10716765	Not Available	583	Open in IMG/M
3300018047\|Ga0187859_10598655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	621	Open in IMG/M
3300019890\|Ga0193728_1133541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1111	Open in IMG/M
3300020580\|Ga0210403_10831026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	733	Open in IMG/M
3300020582\|Ga0210395_11048952	Not Available	603	Open in IMG/M
3300021086\|Ga0179596_10699551	Not Available	513	Open in IMG/M
3300021088\|Ga0210404_10086147	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300021171\|Ga0210405_10229763	All Organisms → cellular organisms → Bacteria	1469	Open in IMG/M
3300021401\|Ga0210393_11094637	Not Available	643	Open in IMG/M
3300021403\|Ga0210397_10347231	Not Available	1099	Open in IMG/M
3300024254\|Ga0247661_1043268	Not Available	819	Open in IMG/M
3300025898\|Ga0207692_10328611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	938	Open in IMG/M
3300025910\|Ga0207684_10751209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	827	Open in IMG/M
3300025915\|Ga0207693_10297616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1264	Open in IMG/M
3300025916\|Ga0207663_10228960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1357	Open in IMG/M
3300025922\|Ga0207646_11198380	Not Available	666	Open in IMG/M
3300025922\|Ga0207646_11878034	Not Available	511	Open in IMG/M
3300025928\|Ga0207700_10658699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	934	Open in IMG/M
3300025932\|Ga0207690_11788966	Not Available	513	Open in IMG/M
3300025939\|Ga0207665_10041767	All Organisms → cellular organisms → Bacteria	3064	Open in IMG/M
3300026121\|Ga0207683_11698209	Not Available	581	Open in IMG/M
3300026214\|Ga0209838_1026799	Not Available	813	Open in IMG/M
3300026294\|Ga0209839_10012574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3474	Open in IMG/M
3300027903\|Ga0209488_10167819	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300028759\|Ga0302224_10117965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinocatenispora	1028	Open in IMG/M
3300028784\|Ga0307282_10057557	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300028784\|Ga0307282_10216160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	918	Open in IMG/M
3300028789\|Ga0302232_10516695	Not Available	587	Open in IMG/M
3300028798\|Ga0302222_10432364	Not Available	515	Open in IMG/M
3300028807\|Ga0307305_10200752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	917	Open in IMG/M
3300028824\|Ga0307310_10286569	Not Available	799	Open in IMG/M
3300028828\|Ga0307312_10257628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. S10(2018)	1130	Open in IMG/M
3300028879\|Ga0302229_10320715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinocorallia → unclassified Actinocorallia → Actinocorallia sp. API 0066	695	Open in IMG/M
3300028906\|Ga0308309_11740616	Not Available	528	Open in IMG/M
3300029943\|Ga0311340_10165507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2287	Open in IMG/M
3300029943\|Ga0311340_10252723	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1719	Open in IMG/M
3300029943\|Ga0311340_11456346	Not Available	538	Open in IMG/M
3300029951\|Ga0311371_12546794	Not Available	519	Open in IMG/M
3300029999\|Ga0311339_10748914	Not Available	948	Open in IMG/M
3300030007\|Ga0311338_10216972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2186	Open in IMG/M
3300030054\|Ga0302182_10137186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1062	Open in IMG/M
3300030058\|Ga0302179_10078266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1465	Open in IMG/M
3300030580\|Ga0311355_11279003	Not Available	644	Open in IMG/M
3300030741\|Ga0265459_12692724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinocorallia → unclassified Actinocorallia → Actinocorallia sp. API 0066	616	Open in IMG/M
3300030906\|Ga0302314_10671636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinocorallia → unclassified Actinocorallia → Actinocorallia sp. API 0066	1065	Open in IMG/M
3300031028\|Ga0302180_10071780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2035	Open in IMG/M
3300031028\|Ga0302180_10259934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	909	Open in IMG/M
3300031234\|Ga0302325_10343630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2377	Open in IMG/M
3300031525\|Ga0302326_10614684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1612	Open in IMG/M
3300032160\|Ga0311301_10131824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4638	Open in IMG/M
3300032160\|Ga0311301_11745896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	745	Open in IMG/M
3300032770\|Ga0335085_10629266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1203	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.51%
Host-Associated	Host-Associated	13.49%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.78%
Plants	Host-Associated → Plants	13.49%
Aquatic	Environmental → Aquatic	8.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.49%
Peat	Environmental → Terrestrial → Peat	14.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.52%
Freshwater	Environmental → Aquatic → Freshwater	8.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.17%
Roots	Host-Associated → Plants → Roots	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.44%
Loam	Environmental → Terrestrial → Soil → Loam	15.08%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	14.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.38%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	14.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.14%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.35%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.17%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.38%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.38%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.59%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.79%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.79%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.43%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.35%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	2.38%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.79%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.79%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026294	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030054	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030906	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_07160560	2170459005	Grass Soil	VHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEVLAEQDSRNRLHEANGRA
JGI10216J12902_1182598074	3300000956	Soil	VQALTTYELRNYRRELEQSLGALPEHVAVRVILQQRLAQVLTEQDSRNRLHQANGRTLR*
Ga0070682_1001872922	3300005337	Corn Rhizosphere	LARFGYQVSPAFWRGFLTTVEQPPHPVHALTTYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0070692_101768533	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VHALTTYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANG
Ga0070659_1015650781	3300005366	Corn Rhizosphere	HPVHALTTYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0070709_102623921	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VHALTTYELKNYRRDLEHSLRALPEHVVVCVILQQRLAEVLAEQDSRSRLHE
Ga0070709_108405142	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTVEQPPHPMHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0070713_1015287822	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHKGNGQA*
Ga0070708_1000784386	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MSVEKPPHPVHSLRTYELRNYRRELEQSLGALPEQVAVRVILQQRLAQVLAEQDSRNRLHQAKGQTLR*
Ga0070708_1007929452	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MTVEQPPHPVHALTTYELKNYRRELEHSLKALPEHVAVRVILQQRLAEVLAEQDSRSRLHKGNGQA*
Ga0070762_104053952	3300005602	Soil	MADPMREFEMAIEQPPHPMHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLAEVLAEQDSRNRLRHAGGTDTSAR*
Ga0070763_108538051	3300005610	Soil	MSIQQPPHPTHALTTYELNNYRRELEHSLKTIPEHAQVRELLQQRLSEVLAEQDSRSRLQHTGGTDASAK*
Ga0068856_1001417213	3300005614	Corn Rhizosphere	VHALTTYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0068860_1023314201	3300005843	Switchgrass Rhizosphere	MSPAFWRGFLTTVEQPPHPVHALTTYELQNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0066787_100925422	3300005950	Soil	MADPVREFEMAIEQPAHPMHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLVEVLAEQDSRNQLRQADGTGTTVL*
Ga0070716_1013878611	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GYQVSPAFWRGFLTTVEQPPHPVHALTTYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0097621_1004497172	3300006237	Miscanthus Rhizosphere	VHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0074056_104532281	3300006574	Soil	MTIEQPPHPVQALTTYELRNYRRELEQSLGALPEHVAVRVILQQRLAQVLAEQDSRNRLHQANGQARL*
Ga0079222_115676902	3300006755	Agricultural Soil	LARFGYQVSPAFWRGFLTTVEQPPHPVRALTTYELRNYRRVLEHSLRALPVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0079221_114634701	3300006804	Agricultural Soil	MTVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANG
Ga0075434_1018381392	3300006871	Populus Rhizosphere	LMTVEQPPHPVHALATYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0075426_108013812	3300006903	Populus Rhizosphere	LARFGYQVSPAFWRGFLTTVEQPPHPVHALATYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0075436_1014488062	3300006914	Populus Rhizosphere	TCSRVHVRPITSLARFGYQVSPAFWRGFLTTVEQPPHPVRALTTYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0099827_103554392	3300009090	Vadose Zone Soil	MSVEQPPHPVHALTTYELKNYRRELEHSLKALPEHVAVRVILQQRLAEVLAEQDSRSRLHEGNGQT*
Ga0105240_115424691	3300009093	Corn Rhizosphere	QVSPAFWRGFLTTVEQPPHPVHALTTYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0066709_1036931851	3300009137	Grasslands Soil	MTIEQPPHPVQALTTYELRNYRRELEQSLGALPEHVAVRVILQQRLAQVLAEQDSRNRLHRANGHATAS*
Ga0099792_105015132	3300009143	Vadose Zone Soil	MSVEQPPHPVHSLTTYELRNYRRELEHSLRALPEHVAVRVLLQQRLAEVLAEQDSRSRLHEANGQA*
Ga0075423_116125432	3300009162	Populus Rhizosphere	LARFGYQVSPAFWRGFLTTVEQPPHPVHALATYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANG
Ga0105248_133887841	3300009177	Switchgrass Rhizosphere	VHALTTYELRNYRRELEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0105237_113534411	3300009545	Corn Rhizosphere	MTVEQPHPVHALTTYELKNYRRELEHSLKALPEHVAVRVILQQRLAEVLAEQDSRSRLHKGNGQA*
Ga0116133_10481042	3300009623	Peatland	MAIQPPPHPMHALTTYELKKYRRELEHSLKTIPEHAQVRELLQERLAEVLAEQDSRNQLHQEDGTGTTVP*
Ga0116133_12013451	3300009623	Peatland	MAIQPPPHPMHALTTYELENYRRELEHSLKTIPEPAQVRELLQQRLTEVLAEQDSRKQLYQADGTGTTVM*
Ga0116215_10667193	3300009672	Peatlands Soil	MSIQQPPHPTHALTTYELKNYRRELEHSLKTLPEHAQARVQLQQRLAEVLAEQDSRNRLHHANGRG*
Ga0116217_105500362	3300009700	Peatlands Soil	MSIQQPPHPTHALTTYELKNYRRELEHSFKTLPEHAQARVQLQQRLAEVLAEQDSRNRLHQANGRG*
Ga0116130_12251541	3300009762	Peatland	MRALTTYELKKYRRELEHSLKTIPEHAQVRELLQERLAEVLAEQDSRNQLHQEDGTGTTVP*
Ga0134125_108726561	3300010371	Terrestrial Soil	VSRAFWRGFLTTVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVPVILRRRLAEVLAEQDSRSRLHEANGRA*
Ga0134125_116409682	3300010371	Terrestrial Soil	MTVEQPPHPVHALTTYELKSYRRELEHPLRALPEHVAVRVLLQQRLAEVLAEQDSRSRLHEADGRT*
Ga0134128_103888571	3300010373	Terrestrial Soil	LARFGYQVSPAFWRGFLTTVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVPVILRRRLAEVLAEQDSRSRLHEANGRA*
Ga0137389_115640781	3300012096	Vadose Zone Soil	VGRLGSEICSVDSWRGFLMTVEQPPHPVHALTTYELKNYRRELEHSLKALPEHVAVRVILQQRLAEVLAEQDSRSRLHEGNGQT*
Ga0137364_100606542	3300012198	Vadose Zone Soil	MIVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEVLAEQDSRNRLHQANGQILL*
Ga0137383_100006694	3300012199	Vadose Zone Soil	MSIQQPPHPMHALTTYELKNYQRELEHSLKTLPEHAQVRVLLQERLSEVLAEQDSRSRLHHANGTGTTMERPCE*
Ga0137383_101732253	3300012199	Vadose Zone Soil	MTIEQPPHPMQALTTYELRNYRRELEQSLEALPEQVAVRVILQQRLAQVLAEQDSRNRLH
Ga0137382_103412572	3300012200	Vadose Zone Soil	MTVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEALAEQDSRNRLHQANGQILL*
Ga0137365_100197171	3300012201	Vadose Zone Soil	VHALTTYELRNYRRELEHSLRALPEHVAVRVILQQRLTEVLTEQDSRSPLHGANGQA*
Ga0137365_100233116	3300012201	Vadose Zone Soil	MTIEQPPHPVQALTTYELRNYRRELEQSLEALPEQVAVRVILQQRLAQVLAEQDSRNRLHQANGRTLR*
Ga0137380_106470452	3300012206	Vadose Zone Soil	MTVEQPPHPVHALMTYELRNYRRELEHSLRALPEYVAVRVILQQRLTEVLTEQDSRSPLHGANGQA*
Ga0137381_100230846	3300012207	Vadose Zone Soil	MTIEQPPHPVQALTTYELRNYRRELEQSLEALPEQVAVRVILQQRLAQVRAEQDSRNRLHQANGRTLR*
Ga0137381_113214862	3300012207	Vadose Zone Soil	MTIEQPPHPVQALTTYELRNYRRELEQSLGALPEHVAVRVILQQRLGQVLAEQDSRNRLHEANGHTLR*
Ga0137381_113447392	3300012207	Vadose Zone Soil	MSIQQPPHPTHALTTYELNNYRRDLEHSLKALPEHTQVRVQLQQRLAEVLAEQDSRNRLHQANGRG*
Ga0137376_108448492	3300012208	Vadose Zone Soil	MTVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVLLQRRLAEVLAEQDSRSR
Ga0137376_114553711	3300012208	Vadose Zone Soil	ELKNYRRELEHSLRALPEHVAVRVILQQRLAEVLAEQDSRNRLHQANGQILL*
Ga0137379_100484371	3300012209	Vadose Zone Soil	MTIEQPPHPVQALTTYELRNYRRELEQSLEALPEQVAVRVILQQRLAQVLAEQDSRNRLH
Ga0137387_106846722	3300012349	Vadose Zone Soil	MTIEQPPHPVQALTTYELRNYRRELEQSLEALPEQVAVRVILQQRLAQVLAEQDSRNRFHQANGRSG*
Ga0137386_100159581	3300012351	Vadose Zone Soil	MTIEQPPHPMQALTTYELRNYRRELEQSLEALPEQVAVRVILQQRLAQVRAEQDSRNRLHQAYGRSG*
Ga0137384_101496283	3300012357	Vadose Zone Soil	MSIQQPPHPMHALTTYELKNYQRELEHSLKTLPEHAQVRVLLQEQLSEVLAEQDSRSRLHHANGTGTTMERPCE*
Ga0137384_108379552	3300012357	Vadose Zone Soil	MSVEQPPHPVHALTTYELKNYRRELEHSLKALPEHVAVRVILQQRLAEVLAEQDSRSRLHQANGQTRL*
Ga0137384_111888261	3300012357	Vadose Zone Soil	MTVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEVLAEQDSRNRLHQANGQILL*
Ga0137385_100837813	3300012359	Vadose Zone Soil	ESGGSWESCCSVDFWRGFLMTVEQPPHPVHALMTYELRNYRRELEHSLRALPEYVAVRVILQQRLTEVLTEQDSRSRLHGANGQA*
Ga0137385_109203271	3300012359	Vadose Zone Soil	MSVEQPPHPVHALTTYELKNYRRELEHSLKALPAPVAVRVILQPRLADVLAEQDSRSRLHEGNGQT*
Ga0137373_105876793	3300012532	Vadose Zone Soil	PPHPVHALMTYELRNYRRELEHSLRALPEYVAVRVILQQRLTEVLTEQDSRSPLHGANGQA*
Ga0137396_102313792	3300012918	Vadose Zone Soil	MTVEQPPHPVHGLTTYELKNYRRELEHSLRALPEHVAVRVLLQQRLAEVLAEQDSRSRLHEANGQA*
Ga0164302_110801251	3300012961	Soil	VEQPPHPVHALTTYELKNYRRELEHSLRALPEHVVVRVILQQRLAEVLAEQDSRSRLHEANGQA*
Ga0164305_121581202	3300012989	Soil	MTVERPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHGANGQA*
Ga0157375_109511932	3300013308	Miscanthus Rhizosphere	AFWRGFLTTVEQPPHPVHALTTYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA*
Ga0182030_101583555	3300014838	Bog	AIEQPPHPMHSLTTYELKNYRRELEHALKTIPEHAQVRELLEQRLTEVLAEQDSRGPAAARQRKRQKR*
Ga0157376_127294411	3300014969	Miscanthus Rhizosphere	MTVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVLLQQRLAEVLAEQDSPSRLHEANGQA*
Ga0132256_1016274181	3300015372	Arabidopsis Rhizosphere	MSVEQPPHPVHALTTCELKNYRREVQHSLRALPEHMAVRVLLQQRLAEQDPRTRLHEANGQA*
Ga0132255_1004153962	3300015374	Arabidopsis Rhizosphere	MSVEQPPHPVHALTTCELKNYRREGQHSLRALPEHMAVRVLLQQRLAEQDSRSRLHEANGQA*
Ga0187879_100665842	3300017946	Peatland	MAIQPPPHPMHALTTYELENYRRELEHSLKTIPEPAQVRELLQQRLTEVLAEQDSRKQLYQADGTGTTVM
Ga0187879_100934773	3300017946	Peatland	MAIQPPPHPMRALTTYELKKYRRELEHSLKTIPEHAQVRELLQERLAEVLAEQDSRNQLHQEDGTGTTVP
Ga0187847_101996371	3300017948	Peatland	MAIQPPPHPMHALTTYELENYRRELEHSLKTIPEPAQVRELLQERQAEVLAEQDS
Ga0187863_101225572	3300018034	Peatland	MAIQPPPHPMHALTTYELKKYRRELEHSLKTLPEHAQVRELLQERLAEVLAEQDSRNQLHQEDGTGTTVP
Ga0187875_103425101	3300018035	Peatland	MAIQPPPHPMHALTTYELENYRRELEHSLKTIPEPAQVRELLQRRLTEVLAEQDSRNRLQHTGGTDTSAR
Ga0187883_100846322	3300018037	Peatland	MAIQPPPHPMHALTTYELENYRRELEHSLKTIPEPAQVRELLQQRLTEVLAEQDSRKQLYQTDGTGTTVM
Ga0187855_107167651	3300018038	Peatland	LGPDPEGRFGEMAIEQPPHPMHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLAEVLAEQNSRNRLRQADGTGTAVP
Ga0187859_105986551	3300018047	Peatland	MAIQPPPHPMRALTTYELKKYRRELEHSLKTLPEHAQVRELLQERLAEVLAEQDSRNQLHQE
Ga0193728_11335412	3300019890	Soil	VQALTTYELRNYRRELEHSLRALPEHVAVRVILQQRLAEILAEQDSRSRLHEKNGQA
Ga0210403_108310261	3300020580	Soil	MTVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEVLAEQDSR
Ga0210395_110489521	3300020582	Soil	VTVEQPPHPVHALTTYELKNYRRELEHSLRTLPEHAAVRVILQQRLAEVLAEQDSRDPLHEANEQA
Ga0179596_106995512	3300021086	Vadose Zone Soil	MSVEQPPHPVHALTTYELKNYRRELEHSLKALPEHVAVRVILQQRLAEVLAEQDSR
Ga0210404_100861471	3300021088	Soil	EQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVLLQRRLAEVLAEQDSRSRLHEANGQA
Ga0210405_102297633	3300021171	Soil	MTVEQPPHPVHALTTYELRNYRRELEHSLRALPEHVAVRVLLQQRLAEVLAEQDSRSRLHEANGQA
Ga0210393_110946371	3300021401	Soil	VTVEQPPHPVHALTTYELKNYRRELEHSLRTLPEHAAVRVILQQRLAEVLAEQDSRDQLHEANEQA
Ga0210397_103472312	3300021403	Soil	VTVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHGANGQA
Ga0247661_10432682	3300024254	Soil	LARFGYQVSPAFWRGFLTTVEQPPHPVHALTTYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA
Ga0207692_103286111	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSVEQPPHPVHSLTTYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEADGRT
Ga0207684_107512091	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTIEQPPHPVQALTTYELRNYRRELEQSLGALPEQVAVRVILQQRLAQVLAEQDSRNRLHQA
Ga0207693_102976162	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLPEVLAEQDSRSRLHEANGRA
Ga0207663_102289602	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTVEQPPHPMHALTTYELKNYRRELEHSLRALPEHVAVRVLLQQRLAEVLAEQDSRSRLHGANGQA
Ga0207646_111983801	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTVEQPPHPVHALTTYELKNYRRELEHSLKALPEHVAVRVILQQRLAEVLAEQDSRSRLHKGNGQA
Ga0207646_118780342	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTIEQPPHPVQALTTYELRNYRRELEQSLGALPEQVAVRVILQQRLAQVLAEQDSRNRLHQAKGQ
Ga0207700_106586991	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVLLQQRLAEVLAEQDSRSRLHEANGQA
Ga0207690_117889661	3300025932	Corn Rhizosphere	QVSPAFWRGFLTTVEQPPHPVHALTTYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA
Ga0207665_100417673	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MTVEQPPHPVHALTTYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGRA
Ga0207683_116982092	3300026121	Miscanthus Rhizosphere	LARFGYQVSPAFWRGFLTTVEQPPHPVHALTTYELRNYRRVLEHSLRALPEHVAVRVILQQRLAEVLAEQDSRSRLHEANGQA
Ga0209838_10267991	3300026214	Soil	MADPVREFEMAIEQPAHPMHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLVEVLAEQDSRNQLRQADGTGTTVL
Ga0209839_100125742	3300026294	Soil	MSIQPPPHPMPALTTYELRNYRCELEHSLKTIPEHAQVRALLQQRLTEVLAEQDSRNRLRHADGTDTTAR
Ga0209488_101678193	3300027903	Vadose Zone Soil	MSVEQPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVLLQQRLAEVLAEQDSRSRLHEANGQA
Ga0302224_101179651	3300028759	Palsa	MAIQQPPHPMHALTTYELKNYRRELEHSLKAISEHAQVRGLLQKRLTEVLAEQDSRNQLHQADGTGTTVM
Ga0307282_100575572	3300028784	Soil	RRADPVQALTTYELRNYRRELEQSLGALPEHVAVRVILQQRLAQVLAEQDSRSRLHRANGQA
Ga0307282_102161601	3300028784	Soil	MSSAAWSSRSPSGSPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEILAEQDSRSRLHEANGQA
Ga0302232_105166951	3300028789	Palsa	MAIEQPAHPMHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLAEVLAEQDSRNRLQHANGTDTSVR
Ga0302222_104323641	3300028798	Palsa	MAIEQPAHPMHSLTTYELKNYRRELEHSLKTIPEHAQVRELLQQRLAEVLAEQDSRNRLRQANG
Ga0307305_102007522	3300028807	Soil	LTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEILAEQDSRSRLHKANGQA
Ga0307310_102865692	3300028824	Soil	VQALTTYELRNYRRELEQSLGALPEHVAVRVILQQRLAQVLAEQDSRSRLHRANGQA
Ga0307312_102576282	3300028828	Soil	MSSAAWSSRSPSGSPPHPVHALTTYELKNYRRELEHSLRALPEHVAVRVILQQRLAEILAEQDSRSRLHEKNGQA
Ga0302229_103207152	3300028879	Palsa	MHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLAEVLAEQDSRNRLQHANGTDTSV
Ga0308309_117406161	3300028906	Soil	LTTYELKNYRRELEHSLRTLPEHAAVRVILQQRLAEVLAEQDSRDPLHEANEQA
Ga0311340_101655072	3300029943	Palsa	MADSVREFEMAIEQPPHPMHSLTTYELKNYRRELEHSLKTIPEHAQVRELLQQRLAEVLAEQDSRNRLRQANGTGSSSSRSGQ
Ga0311340_102527231	3300029943	Palsa	PHPMRALTTYELKKYRRELEHSLKTIPEHAQVRELLQERLAEVLAEQDSRNQLHQEDGTGTTVP
Ga0311340_114563462	3300029943	Palsa	MADSVREFEMAIEQPAHPTHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLAEVLAEQDSRIRLQHVGGTD
Ga0311371_125467942	3300029951	Palsa	MADSVREFEMAIEQPAHPMHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLAEVLAEQDSRNRLQHANGTDTSVR
Ga0311339_107489142	3300029999	Palsa	MADSVRELEMAIEQPAHPMHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLAEVLAEQDSRNRLRQADGTGTAVP
Ga0311338_102169721	3300030007	Palsa	MAIEQPAHPTHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLAEVLAEQDSRIRLQHVGGTDTSAR
Ga0302182_101371862	3300030054	Palsa	MAIQQPPHPMHALTTYELKNYRRELEHSLKAISEHAQVRGLLQKRLTEVLAEQDSRNQLHQADGSGTTVM
Ga0302179_100782661	3300030058	Palsa	MAIQQPPHPMHALTTYELKNYRRELEHSLKAISEHAQVRGLLQKRLTEVLAEQDSRN
Ga0311355_112790032	3300030580	Palsa	MAIEQPAHPTHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLTEVLAEQDSRRRLQRT
Ga0265459_126927241	3300030741	Soil	DCLGNSEMAIQPPPHPMHALTTYELKNYRRELEHSLKTISEHTQVRELLQERLTEVLAEQDSRNQRHQADGTGTTVM
Ga0302314_106716362	3300030906	Palsa	MAIEQPAHPTHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLAEVLAEQDSRNRLQHANGTDTSVR
Ga0302180_100717801	3300031028	Palsa	GNLEMAIQQPPHPMHALTTYELKNYRRELEHSLKAISEHAQVRGLLQKRLTEVLAEQDSRNQLHQADGTGTTVM
Ga0302180_102599342	3300031028	Palsa	EQPAHPTHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLAEVLAEQDSRIRLQHVGGTDTSAR
Ga0302325_103436303	3300031234	Palsa	MADSVREFEMAIEQPAHPTHSLTTYELKNYRRELEHALKTIPEHAQVRELLQQRLAEVLAEQDSRIRLQHVGGTDTSAR
Ga0302326_106146841	3300031525	Palsa	IHSLTTYELKNYRRELEHWLKTIPEHAQVRELLQQRLAEVLAEQDSRNRLRQANGTGSSSSRSGQ
Ga0311301_101318247	3300032160	Peatlands Soil	MSIQQPPHPTHALTTYELKNYRRELEHSLKTLPEHAQARVQLQQRLAEVLAEQDSRNRLHHANGRG
Ga0311301_117458961	3300032160	Peatlands Soil	MSIQQPPHPTHALTTYELKNYRRELEHSFKTLPEHAQARVQLQQRLAEVLAEQDSRNRLHQANGRG
Ga0335085_106292662	3300032770	Soil	MTIEQPPHPVQALTTYELRNYRRELEQSLGAPPEDVAVRVILQQRLAQVLAEQDSRNRLHQANGRTQR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067027

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences