Metagenome / Metatranscriptome Family F067213

Basic Information
Family ID	F067213
Family Type	Metagenome / Metatranscriptome
Number of Sequences	126
Average Sequence Length	92 residues
Representative Sequence	ANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK
Number of Associated Samples	118
Number of Associated Scaffolds	126

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.59 %
% of genes near scaffold ends (potentially truncated)	98.41 %
% of genes from short scaffolds (< 2000 bps)	89.68 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Most Common Taxonomy
Group	Bacteria (90.476 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (42.063 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.24% β-sheet: 0.00% Coil/Unstructured: 45.76%
Feature Viewer

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Pfam ID	Name	% Frequency in 126 Family Scaffolds
PF09084	NMT1	46.83
PF00378	ECH_1	3.17
PF13607	Succ_CoA_lig	2.38
PF13565	HTH_32	0.79

COG ID	Name	Functional Category	% Frequency in 126 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	46.83
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	46.83

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.48 %
Unclassified	root	N/A	9.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.48 %
Unclassified	root	N/A	9.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.48 %
Unclassified	root	N/A	9.52 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.95 %
Unclassified	root	N/A	9.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	30.16 %
Unclassified	root	N/A	9.52 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.79 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	30.16 %
Unclassified	root	N/A	9.52 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.79 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	30.16 %
Unclassified	root	N/A	9.52 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.79 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.16 %
Unclassified	root	N/A	9.52 %
Synechococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae	0.79 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.16 %
Unclassified	root	N/A	9.52 %
Synechococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	0.79 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.16 %
Unclassified	root	N/A	9.52 %
unclassified Synechococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus	0.79 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	30.16 %
Unclassified	root	N/A	9.52 %
Synechococcus sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp.	0.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2001200001\|2001330395	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1111	Open in IMG/M
2170459019\|G14TP7Y02GUX36	Not Available	580	Open in IMG/M
3300000789\|JGI1027J11758_12854668	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300000891\|JGI10214J12806_10523339	All Organisms → cellular organisms → Bacteria	1587	Open in IMG/M
3300000953\|JGI11615J12901_11963468	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300001139\|JGI10220J13317_10527626	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300001431\|F14TB_104786438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	530	Open in IMG/M
3300005093\|Ga0062594_100705532	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300005288\|Ga0065714_10128349	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300005289\|Ga0065704_10689544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300005327\|Ga0070658_10589427	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300005331\|Ga0070670_100649014	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	947	Open in IMG/M
3300005333\|Ga0070677_10261109	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300005334\|Ga0068869_101150813	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	680	Open in IMG/M
3300005337\|Ga0070682_100167222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp.	1525	Open in IMG/M
3300005344\|Ga0070661_100361641	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300005347\|Ga0070668_102057067	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300005355\|Ga0070671_100101859	All Organisms → cellular organisms → Bacteria	2409	Open in IMG/M
3300005440\|Ga0070705_100031861	All Organisms → cellular organisms → Bacteria	2924	Open in IMG/M
3300005444\|Ga0070694_100060898	All Organisms → cellular organisms → Bacteria	2575	Open in IMG/M
3300005457\|Ga0070662_100008996	All Organisms → cellular organisms → Bacteria	6516	Open in IMG/M
3300005457\|Ga0070662_100235578	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300005457\|Ga0070662_101549475	Not Available	572	Open in IMG/M
3300005526\|Ga0073909_10053090	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300005547\|Ga0070693_100251548	All Organisms → cellular organisms → Bacteria	1171	Open in IMG/M
3300005829\|Ga0074479_10058353	Not Available	653	Open in IMG/M
3300005841\|Ga0068863_100930001	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005843\|Ga0068860_100237847	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300006049\|Ga0075417_10396647	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300006797\|Ga0066659_11407231	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300006845\|Ga0075421_100310065	All Organisms → cellular organisms → Bacteria	1917	Open in IMG/M
3300006845\|Ga0075421_101975788	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300006852\|Ga0075433_10433376	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300006871\|Ga0075434_101642048	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300006871\|Ga0075434_102087908	Not Available	571	Open in IMG/M
3300006903\|Ga0075426_10255052	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300006904\|Ga0075424_100789096	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300006904\|Ga0075424_100820041	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300006914\|Ga0075436_100207516	All Organisms → cellular organisms → Bacteria	1388	Open in IMG/M
3300007004\|Ga0079218_11464726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	735	Open in IMG/M
3300009093\|Ga0105240_12378228	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300009094\|Ga0111539_13181670	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300009111\|Ga0115026_10491892	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	910	Open in IMG/M
3300009147\|Ga0114129_12206670	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	662	Open in IMG/M
3300009147\|Ga0114129_13321093	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300009148\|Ga0105243_10218242	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300009148\|Ga0105243_13100802	Not Available	503	Open in IMG/M
3300009156\|Ga0111538_11493394	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300009167\|Ga0113563_11738517	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300009176\|Ga0105242_11770480	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009545\|Ga0105237_12004399	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300009810\|Ga0105088_1048723	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	713	Open in IMG/M
3300010358\|Ga0126370_10889318	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300010359\|Ga0126376_11643023	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	676	Open in IMG/M
3300010375\|Ga0105239_10220267	All Organisms → cellular organisms → Bacteria	2128	Open in IMG/M
3300010397\|Ga0134124_10778971	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300010403\|Ga0134123_12186451	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	615	Open in IMG/M
3300011333\|Ga0127502_11306375	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	867	Open in IMG/M
3300011440\|Ga0137433_1113707	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300011444\|Ga0137463_1087362	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1171	Open in IMG/M
3300011445\|Ga0137427_10316973	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300012022\|Ga0120191_10030785	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	833	Open in IMG/M
3300012096\|Ga0137389_10232602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1544	Open in IMG/M
3300012179\|Ga0137334_1045430	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300012203\|Ga0137399_10074663	All Organisms → cellular organisms → Bacteria	2553	Open in IMG/M
3300012207\|Ga0137381_11439934	Not Available	581	Open in IMG/M
3300012232\|Ga0137435_1254295	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012354\|Ga0137366_10133249	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1874	Open in IMG/M
3300012361\|Ga0137360_11630087	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300012514\|Ga0157330_1064498	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300012971\|Ga0126369_11529061	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	757	Open in IMG/M
3300012976\|Ga0134076_10484319	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	563	Open in IMG/M
3300014300\|Ga0075321_1016407	All Organisms → cellular organisms → Bacteria	1104	Open in IMG/M
3300014872\|Ga0180087_1112648	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300014969\|Ga0157376_11396957	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300015253\|Ga0180081_1072885	Not Available	613	Open in IMG/M
3300015371\|Ga0132258_10522358	All Organisms → cellular organisms → Bacteria	2972	Open in IMG/M
3300015372\|Ga0132256_100849874	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300017659\|Ga0134083_10013258	All Organisms → cellular organisms → Bacteria	2804	Open in IMG/M
3300017792\|Ga0163161_11508896	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	590	Open in IMG/M
3300017939\|Ga0187775_10452252	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	541	Open in IMG/M
3300017966\|Ga0187776_11600360	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	504	Open in IMG/M
3300018028\|Ga0184608_10534341	Not Available	500	Open in IMG/M
3300018032\|Ga0187788_10126625	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	945	Open in IMG/M
3300018054\|Ga0184621_10309861	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300018075\|Ga0184632_10495887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	501	Open in IMG/M
3300018077\|Ga0184633_10323954	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	782	Open in IMG/M
3300018078\|Ga0184612_10327421	Not Available	781	Open in IMG/M
3300018082\|Ga0184639_10570295	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300020003\|Ga0193739_1114263	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	673	Open in IMG/M
3300020004\|Ga0193755_1048845	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300022214\|Ga0224505_10065650	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300022534\|Ga0224452_1192659	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	627	Open in IMG/M
3300022694\|Ga0222623_10403000	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300025904\|Ga0207647_10612361	Not Available	600	Open in IMG/M
3300025917\|Ga0207660_11532668	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	538	Open in IMG/M
3300025919\|Ga0207657_10047111	All Organisms → cellular organisms → Bacteria → Proteobacteria	3772	Open in IMG/M
3300025931\|Ga0207644_11799573	Not Available	512	Open in IMG/M
3300025932\|Ga0207690_10203480	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300025945\|Ga0207679_10242604	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300025986\|Ga0207658_10312100	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300026035\|Ga0207703_11256680	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300026058\|Ga0208421_1022848	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	573	Open in IMG/M
3300026067\|Ga0207678_10034341	All Organisms → cellular organisms → Bacteria	4417	Open in IMG/M
3300026075\|Ga0207708_10932577	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300026088\|Ga0207641_11308507	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300027639\|Ga0209387_1169793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	583	Open in IMG/M
3300027646\|Ga0209466_1062581	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	751	Open in IMG/M
3300027725\|Ga0209178_1207048	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300027821\|Ga0209811_10041384	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300027873\|Ga0209814_10363765	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300027873\|Ga0209814_10520067	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	528	Open in IMG/M
3300027874\|Ga0209465_10198880	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300027907\|Ga0207428_10252407	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300027909\|Ga0209382_11959137	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300029636\|Ga0222749_10734157	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300031892\|Ga0310893_10225910	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300032000\|Ga0310903_10383231	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300032013\|Ga0310906_10981069	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300032174\|Ga0307470_11014066	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300032180\|Ga0307471_102654399	Not Available	635	Open in IMG/M
3300033412\|Ga0310810_10053374	All Organisms → cellular organisms → Bacteria	4918	Open in IMG/M
3300033433\|Ga0326726_10292219	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300033487\|Ga0316630_10060070	All Organisms → cellular organisms → Bacteria	2370	Open in IMG/M
3300033551\|Ga0247830_11499222	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
3300034147\|Ga0364925_0013361	All Organisms → cellular organisms → Bacteria	2524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.73%
Host-Associated	Host-Associated	40.48%
Engineered	Engineered	0.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	42.86%
Plants	Host-Associated → Plants	40.48%
Aquatic	Environmental → Aquatic	15.87%
Solid Waste	Engineered → Solid Waste	0.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.54%
Sediment	Environmental → Aquatic → Sediment	12.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.94%
Freshwater	Environmental → Aquatic → Freshwater	2.38%
Marine	Environmental → Aquatic → Marine	0.79%
Peat	Environmental → Terrestrial → Peat	0.79%
Floodplain	Environmental → Terrestrial → Floodplain	0.79%
Grass	Engineered → Solid Waste → Grass	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.70%
Loam	Environmental → Terrestrial → Soil → Loam	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.56%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.38%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.79%
Sediment	Environmental → Aquatic → Marine → Sediment	0.79%
Sand	Environmental → Terrestrial → Soil → Sand	0.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.79%
Composting	Engineered → Solid Waste → Grass → Composting	0.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.76%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.79%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.79%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.79%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.79%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.29%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.14%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.38%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.59%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.59%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.59%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.59%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.79%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.79%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.79%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.79%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.79%
Terrestrial	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial	0.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.79%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.79%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.79%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.79%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2001200001	Soil microbial communities from Waseca County, Minnesota, USA - Sample 10150	Environmental	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012022	Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C6	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014300	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D1	Environmental	Open in IMG/M
3300014872	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT790_16_10D	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015253	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT590_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300022214	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026058	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2001389614	2001200001	Soil	VTNEDSTKRIIGKYLGISDGDLLRQSYLYVVDTFVREPFVPESVLQAMVQRMVEVNMIDVKSAQATPTTAYYDNSYVAELKQTGFLDNIWK
4MG_04527500	2170459019	Switchgrass, Maize And Mischanthus Litter	RSANEDFTKRLIGKYLGITDAEVLRQSYAYVSDNFARDPAVPDNVMQSMVQRMAQLNMIDTKAAQSTPAGAYYDNSFVNEVKSSGFLDSVWK
JGI1027J11758_128546682	3300000789	Soil	KLIARFLSISDPDLLRQSYLYVNESFVREPFVPEGTVRSMVERMAQLNLIDAKSAQSTPTTAYFDNTFVTELKQSGFLDSLWK*
JGI10214J12806_105233392	3300000891	Soil	NEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK*
JGI11615J12901_119634682	3300000953	Soil	LGNSDNDLLRQSFLYVTETFVREPFVPESTMKSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK*
JGI10220J13317_105276261	3300001139	Soil	KYLGISDAELLRQSYLYVTETFAREPFVPESTMQAMVQRMVQVNMIDAKSAQTTPTNAYFDNSYVAELKQSGFLDNTWK*
F14TB_1047864381	3300001431	Soil	ISKYLGITDGDLLRQSYLYVTETFVREPFVPERTMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAELKQSGFLDNLWK*
Ga0062594_1007055322	3300005093	Soil	LGITDPDLQRQSYQYIGETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAELKQSGFLDSVWK*
Ga0065714_101283491	3300005288	Miscanthus Rhizosphere	SDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0065704_106895441	3300005289	Switchgrass Rhizosphere	KYLGVTDGDLLRQSYLYVAETFVREPFVPERTMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAELKQSGFLDNLWK*
Ga0070658_105894272	3300005327	Corn Rhizosphere	RYAMANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0070670_1006490142	3300005331	Switchgrass Rhizosphere	RLIGKYLGITDAEVLRQSYAYVSDNFARDPAVPENVMQSMVQRMAQLNMIDAKAAQSTPAGAYYDNSFVNEVKSSGFLDSVWK*
Ga0070677_102611091	3300005333	Miscanthus Rhizosphere	KFAATNEETTKRIISKYLGIKDPELLRQSFLYLSENLARDPAVPENVIQSMVQRMAQLNMVDAKGAQSTPTSAYLDNSYVNELKQSGFVDSVWK*
Ga0068869_1011508132	3300005334	Miscanthus Rhizosphere	RAIAKYLGTADPDLLRQSYQYIVETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQSTPVSAYFDNSYVAELKQAGFFDTVWK*
Ga0070682_1001672221	3300005337	Corn Rhizosphere	EGTRYAMANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMKSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFIDGIWK*
Ga0070661_1003616411	3300005344	Corn Rhizosphere	LIAKYLGINDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSVQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0070668_1020570671	3300005347	Switchgrass Rhizosphere	GIADSDLLRQSFLYVTETFVREPFVPESTMKSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0070671_1001018593	3300005355	Switchgrass Rhizosphere	DLVVRVIKSTIEGTRYAVANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMKSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFIDGIWK*
Ga0070705_1000318614	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMKSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0070694_1000608981	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VVVRLIKSTVEATKFAISNEDFTKRAIAKYLGTADPDLLRQSYQYIVETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQSTPVSAYFDNSYVAELKQAGFFDTVWK*
Ga0070662_1000089966	3300005457	Corn Rhizosphere	VVRVIKSTIEGTRYAVANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMKSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0070662_1002355782	3300005457	Corn Rhizosphere	IVVRLIKATVEATKFATSNEDFTKRAISKYLGITDPDLQRQSYQYIGETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAELKQSGFLDSVWK*
Ga0070662_1015494751	3300005457	Corn Rhizosphere	AAAHRDVVVRVIKSTIEGTRYAMANEDDTKRLIAKYLGITDSDLLRQSFLYVTETFVREPFVPESTVQSMVQRMVQLNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDAIWK*
Ga0073909_100530902	3300005526	Surface Soil	MSNEDFTKRAIAKYLGITDPDLQRQSYQYIGETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQSTPTTAYFDNSYVAELKQSGFLDSVWK*
Ga0070693_1002515482	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	NEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMKSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0074479_100583532	3300005829	Sediment (Intertidal)	GLIKATVEGTKYVSANEDFTKRLIGKYLGITDAELLRQSYAYVTDNFARDPAVPDNVMQSMVQRMAQLNMIDTKATQSTPTSAYYDNSFVNELKQSGFLDSVWK*
Ga0068863_1009300012	3300005841	Switchgrass Rhizosphere	TRYAMANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0068860_1002378471	3300005843	Switchgrass Rhizosphere	ANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0075417_103966472	3300006049	Populus Rhizosphere	ANEEFSKRLISKYLGVNDADLLRQSYLYVSETFVREPFVPESTMQSMVQRMAQVNMIDAKSAQSTPTSAYFDNSYVAELKQSGFLDSVWK*
Ga0066659_114072312	3300006797	Soil	VANEEFSKRLISKYLGVNDADLLRQSYLYVSETFVREPFVPESTMQSMVQRMAQVNMIDAKSAQSTPTSAYFDNSYVAELKQSGFLDSVWK*
Ga0075421_1003100651	3300006845	Populus Rhizosphere	SNEDFTKRAISKYLGITDPDLQRQSYQYIGETFVREPFVPESTIQSMVQRMVQVNMIDAKSAQTTPTTAYFDNSYVAELKQSGFLDSVWK*
Ga0075421_1019757882	3300006845	Populus Rhizosphere	LGVTDADLLRESFLYIRETFVREPFVPESTVQSMVQRMVQVNMIDAKSAQSTPTSAYFDNAYVAELKQSGFLDSLWK*
Ga0075433_104333761	3300006852	Populus Rhizosphere	DPDLLRQSYLYVTESFVREPFVPEGTVRSMVERMAQLNLIDAKAAQSTPTTAYFDNTFVAELKQSGFLDSLWK*
Ga0075434_1016420482	3300006871	Populus Rhizosphere	LEATRYATANEDYTKGLIGKYLGVTDADLLRESFLYIRETFVREPFVPESTVQSMVQRMVQVNMIDVKSAQSTPTSAYFDNAYVAELKQSGFLDSLWK*
Ga0075434_1020879081	3300006871	Populus Rhizosphere	VRMIKATVEGTKYAAANEEYTKKLIARFLNISDLDLLRQSYLYVTESFVREPFVPEGTVRSMVERMAQLNLIDTKSAQAMPASAYFDNSFVAELKQSGFLDSVWR*
Ga0075426_102550521	3300006903	Populus Rhizosphere	NEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMKSMLQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0075424_1007890962	3300006904	Populus Rhizosphere	VHRDTVVRLIKTTVEATKHAVANEEFSKRLISKYLGVNDADLLRQSYLYVSETFVREPFVPESTMQSMVQRMAQVNMIDAKSAQSTPTSAYFDNSYVAELKQSGFLDSVWK*
Ga0075424_1008200412	3300006904	Populus Rhizosphere	EDYTKGLIGKYLGVTDADLLRESFLYIRETFVREPFVPESTVQSMVQRMVQVNMIDAKSAQSTPTSAYFDNAYVAELKESGFLDSLWK*
Ga0075436_1002075161	3300006914	Populus Rhizosphere	DFTKRTIGKYLGITDPDLQRQSYQYINETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQTTPISAYFDNSYVAELKQSGFLDSVWK*
Ga0079218_114647262	3300007004	Agricultural Soil	VTNEDSTKRIIGKYLGISDSDLLRQSYLYVVETFVREPFVPESVMQAMVQRMVEVNMIDVKSAQATPTTAYYDNSYVAELKQTGFLDNIWK*
Ga0105240_123782282	3300009093	Corn Rhizosphere	VANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMKSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0111539_131816701	3300009094	Populus Rhizosphere	ISKYLGITDPDLQRQSYQYIGETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQTTPTTAYFDNSYVAELKQSGFLDSVWK*
Ga0115026_104918921	3300009111	Wetland	LIRATVEATKLAIANEEFTKRTIAKHLGVSDPELLRLNYLYVSDTFVREPFVPDAAMQSMVQRMVQVNMIDAKSAQTTPTSAYYDNSFVNELKQSGFLDAVWK*
Ga0114129_122066701	3300009147	Populus Rhizosphere	EDFTKRAISKYLGITDPDLQRLSYQYIGETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQSTPISAYFDNSFVAELKQSGFLDTIWK*
Ga0114129_133210932	3300009147	Populus Rhizosphere	TDPDLQRQSYQYIGETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQTTPTTAYFDNSYVAELKQSGFLDSVWK*
Ga0105243_102182423	3300009148	Miscanthus Rhizosphere	FAMSNEDFTKRAISKYLGITDPDLQRQSYQYIGETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAELKQSGFLDSVWK*
Ga0105243_131008021	3300009148	Miscanthus Rhizosphere	KSTIEGTRYAVANEDYTKRLIAKYLGISNNDLLRQSFLYVTETFVREPFVPESTMKSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFIDGIWK*
Ga0111538_114933941	3300009156	Populus Rhizosphere	HRDMVVRVIKSTLEATRYAIANEDYTKGAIAKYLGVTDADLLRESFLYVTETFVREPFVPESTVQSMVQRMVQVNMIDAKSAQSTPTSAYFDNSYVAELKQSGFLDSLWK*
Ga0113563_117385171	3300009167	Freshwater Wetlands	LGITDPEVLRQSYAYVTDNFPRDPAVPDNVVQSMVQRMAQLNMIDTKSAQSTPTSVYYDNSFVNELKSSGFLDNVWK*
Ga0105242_117704802	3300009176	Miscanthus Rhizosphere	ATNEETTKRIISKYLGIKDPELLRQSFLYLSENLARDPAVPENVIQSMVQRMAQLNMVDAKGAQSTPTSAYLDNSYVNELKQSGFVDSVWK*
Ga0105237_120043992	3300009545	Corn Rhizosphere	AIANEDYTKGLIAKYLGINDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSVQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0105088_10487231	3300009810	Groundwater Sand	EATKHAATNEEFTKKLIAKYLGVNDTDVLRQSYLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQSVPTSAYFDNSFVAELKQSGFLDNVWK*
Ga0126370_108893181	3300010358	Tropical Forest Soil	RYAIANEDYTKRLIAKYLGVNDAELLRQSFLYVTATFVREPFVPQTTMQSMVQRMVQVNMIDAKAAQSTPISAYFDNSYVAELKQSGFLDGIWK*
Ga0126376_116430231	3300010359	Tropical Forest Soil	KATVEATRYTAANEDYTKQLIGRYLNISDPDLLRQSYLYVTESFVREPFVPESTVRSMVERMVQLNLFDAKAAQSTPATAYFDNSFVAELKQSGFLDTLWK*
Ga0105239_102202671	3300010375	Corn Rhizosphere	IANEDYTKGLIAKYLGINDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSVQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0134124_107789711	3300010397	Terrestrial Soil	TVEGTKFAATNEEATKRIISKYLGIKDADLLRQSFLYLSENLARDPAVPENVIQSMVQRMAQLNMVDAKGAQSTPTSAYLDNSYVNELKQSGFVDSVWK*
Ga0134123_121864511	3300010403	Terrestrial Soil	APHREIVVRVIKSTVEGTRYAIANEDYTKGLIAKYLGINDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSVQATPTSAYFDNSYVTELKQSGFLDGIWK*
Ga0127502_113063752	3300011333	Soil	HREIIVRLIKSTVEGTKYAMTNEDSTKRIIGKYLGISDGDLLRQSYLYVVDTFVREPFVPESVIQAMVQRMVEVNMIDVKSAQATLTTAYYDNSYVAELKQTGVLDNIWK*
Ga0137433_11137072	3300011440	Soil	LIKATVEATKFASANEDFTKRLIGKYLGIADAELLRQSYAYVTENFARDPSVPESILQSMVQRMAQLNMIDAKAAQSTPTSAYYDNSFVNELKQSGFLASVWK*
Ga0137463_10873622	3300011444	Soil	VEATKHAVVNEEFTKRLIAKYLGVSDPELQRQSYQYVVETFVREPFVPESAMQSMIQRMVQVNMIDSKSAQATPTSAYFDNSFVAELKQSGFLDNIWK*
Ga0137427_103169732	3300011445	Soil	LRLIRATVEGTKLATANEDSTKRLISKYLGVSDPELLRQSYLYVTESFARDPSVPENVVQSMVQRMAQLNMVDAKSAQATPVGAYYDNSFVAELKQSGFLDSVWN*
Ga0120191_100307852	3300012022	Terrestrial	KPGDVVFRGIKTTIEATKHATTNEEFTKKLIAKYLGVNDPDVLRKSYLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQSVPTSAYFDNSFGAELKQSGFLDSVWK*
Ga0137389_102326021	3300012096	Vadose Zone Soil	KDVVVRMIKATVEGTRYAVANEEFTKKLIARYLNLSDPDLLRQSYLYVTENFVREPFVPESTVRSMVEKMAQLNLIDAKAAQATPASAYFDNSFVAELKQSGFLDNLWK*
Ga0137334_10454302	3300012179	Soil	SDPELLRQSYLYVSESFARDPSVPENVVQSMVQRMAQLNMVDAKSAQATPVGAYYDNSFVAELKQSGFLDSVWK*
Ga0137399_100746631	3300012203	Vadose Zone Soil	EEFSKRLISKYLGVNDADLLRQSYLYVSETFVREPFVPESTMQSMVQRMAQVNMIDAKSAQSTPTSAYFDNSYVAELKQSGFLDSVWK*
Ga0137381_114399342	3300012207	Vadose Zone Soil	HRDTVVRLIKTTVEATKHAVANEEFSKRLISKYLGVNDADLLRQSYLYVSETFVREPFVPESTMQSMVQRMAQVNMIDAKSAQSTPTSAYFDNSYVAELKQSGFLDSVWK*
Ga0137435_12542951	3300012232	Soil	GVSDAELLRQSYLYVTESFVRDPSVPENVVQSMVQRMAQLNMVDAKSAQATPVGAYYDNSFVAELKQSGFLDSVWK*
Ga0137366_101332494	3300012354	Vadose Zone Soil	NEESTKRVISKYLGITDGDLLRQSYLYVTETFVREPFVPETTMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAELKQSGFLDNLWK*
Ga0137360_116300872	3300012361	Vadose Zone Soil	SKYLGVNDADLLRQSYLYVSETFVREPFVPESTMQSMVQRMAQVNMIDAKSAQSTPTSAYFDNSYVAELKQSGFLDSVWK*
Ga0157330_10644981	3300012514	Soil	TDPDLQRQSYQYIGETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAELKQSGFLDSVWK*
Ga0126369_115290612	3300012971	Tropical Forest Soil	KATVEATRYAAANEDYTKQLIGRYLNISDPDLLRQSYLYVTESFVREPFVPESTVRSMVERMVQLNLIDAKAAQSTPATAYFDNSFVAELKQSGFLDTLWK*
Ga0134076_104843192	3300012976	Grasslands Soil	RDVVVRLIKATLEATKHAVANEESTKRVISKYLGITDGDLLRQSYLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAELKQSGFLDNLWK*
Ga0075321_10164071	3300014300	Natural And Restored Wetlands	LGVTDSDLLRQSYLYVADTFVREPFVPESVMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAALKQAGVLDKIWK*
Ga0180087_11126481	3300014872	Soil	ATVEATRYAIANEEFTKRLIGKFLGITDGNLIRQSYLYVSDTFVREPFVPEATMQSMVQRMVEVNMIDAKSAQSTPTSAYYDNSFVNELKQSGFFDTIWK*
Ga0157376_113969571	3300014969	Miscanthus Rhizosphere	TTKRIISKYLGIKDPELLRQSFLYLSENLARDPAVPENVIQSLWQRWAHLNMVDAKGAQSTPTSAYLDNSYVNELKQSGFVDSVWK*
Ga0180081_10728851	3300015253	Soil	LIKATVEATKFTSANEDFTKRLIGKYLGIADAELLRQSYAYVTENFARDPSVPENVVQSMVQRMAQLNMIDAKAAQSTPTSAYYDNSFVNELKQSGFLDSVWK*
Ga0132258_105223584	3300015371	Arabidopsis Rhizosphere	EGTKFAATNEEATKRIISKYLGIKDADLLRQSFLYLAENLARDPAVPENVIQSMVQRMAQLNMVDAKGAQSTPTSAYLDNSYVNELKQSGFVDSVWK*
Ga0132256_1008498741	3300015372	Arabidopsis Rhizosphere	DYTKRLIAKYLGINDNDLLRQSFLYVTETFVREPFVPESTMQSMIQRMVQVNMIDAKSVQATPTSAYFDNSYVTELKRSGFLDGIWK*
Ga0134083_100132584	3300017659	Grasslands Soil	ISHRDVIVRLIKVTREATKHALTNEESTKRVISKYLGITDGDLLRQSYLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAELKQSGFLDNLWK
Ga0163161_115088961	3300017792	Switchgrass Rhizosphere	TVEGTRYAIANEDYTKGLIAKYLGINDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSVQATPTSAYFDNSYVTELKQSGFLDGIWK
Ga0187775_104522522	3300017939	Tropical Peatland	KAMATNEELSKRIIGRYLGIADPDLLRQSFLYVNETFVREPFVPEGVMQSMVQRMVQVNMIDAKSAQSTPTSAYFNNSYLAEIKQSGFLDSVWK
Ga0187776_116003601	3300017966	Tropical Peatland	ATIEATKAMATNEELSKRIIRRYLGIADPDLLRQSFLYVTETFVREPFVPEGVMQSMVQRMVQVNMIDAKSAQSTPTSAYFDNSYLAEIKQSGFLDTVWK
Ga0184608_105343411	3300018028	Groundwater Sediment	ESTKRLISKYLGISDQDLLRQSFLYVTETFVREPFVPESAMQSMVQRMVQVNMIDLKSAQATPISAYYDNSYVAELKQSGFLDNLWK
Ga0187788_101266251	3300018032	Tropical Peatland	RIIGRYLGIADPDLLRQSFLYVTETFVREPFVPEGVMQSMVQRMVQVNMIDAKSAQSTPTSAYFDNSYLAEIKQSGFLDSVWK
Ga0184621_103098612	3300018054	Groundwater Sediment	FSKRLISKYLGVNDADLLRQSYLYVSETFVREPFVPESTMQSMVQRMAQVNMIDAKSAQSTPTSAYFDNSYVAELKQSGFLDSVWK
Ga0184632_104958871	3300018075	Groundwater Sediment	RYLGITDGDLLRQSYLYVVDTFVREPFVPESVMQAMVQRMVQVNMIDAKSAQATPNSAYYDNSYVAELKQNGFLDNIWK
Ga0184633_103239541	3300018077	Groundwater Sediment	SHREVVVRLIKSTVEGIKYAVTNEDSTKRIISKYLGITDGDLLRQSYLYVVDTFVREPFVPESVMQAMVQRMVQVNMIDAKSAQATPTSAYYDNSYVAELKQNGFLDNIWK
Ga0184612_103274212	3300018078	Groundwater Sediment	TKRIISRYLGITDGDLLRQSYLYVVDTFVREPFVPESVMQAMVQRMVQVNMIDAKSAQATPTSAYYDNSYVTELKQNGFLDTIWK
Ga0184639_105702951	3300018082	Groundwater Sediment	YAVTNEDSTKRIISKYLGITDGDLLRQSYLYVVDTFVREPFVPESVMQAMVQRMVQVNMIDAKSAQATPTSAYFDNSYVAELKHNGFLDNIWK
Ga0193739_11142632	3300020003	Soil	KHIAANEEFTKKLISKYLGVNDVEVLRQSYLYVTETFVREPFVPQSTMQSMVQRMVQVNMIDAKSAQTTPTSAYYDNSYVAELKQSGFLDNLWK
Ga0193755_10488451	3300020004	Soil	ATKHAVANEEFSKRLISKYLGVNDADLLRQSYLYVSETFVREPFVPESTMQSMVQRMAQVNMIDAKSAQSTPTSAYFDNSYVAELKQSGFLDSVWK
Ga0224505_100656501	3300022214	Sediment	TDAERLRQSYAYVTDNFAKDPAVPESVIQSMVQRMAQLNMIDAKAAQSTPTSAYFDNSYANELKQSGYIESVWK
Ga0224452_11926592	3300022534	Groundwater Sediment	TKRLISKYLGISDQDLLRQSFLYVTETFVREPFVPESAMQSMVQRMVQVNMIDLKSAQATPISAYYDNSYVAELKQSGFLDNLWK
Ga0222623_104030001	3300022694	Groundwater Sediment	RLISKYLGITDGDLLRQSFLYVTETFVREPFVPESVMQSMVQRMVQVNMIDLKSAQATPISAYYDNSYVAELKQSGFLDNLWK
Ga0207647_106123611	3300025904	Corn Rhizosphere	VVRVIKSTIEGTRYAMANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPENTMKSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK
Ga0207660_115326682	3300025917	Corn Rhizosphere	LGTTDADLLRQSYQYVGEIFAREPFVPEKTMRAMLEHMVQVNMIDAKSSQSLPIDAYFDNSFVAELKQSGFLDAVWK
Ga0207657_100471111	3300025919	Corn Rhizosphere	RDLVVRVIKSTIEGTRYAVANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMKSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK
Ga0207644_117995732	3300025931	Switchgrass Rhizosphere	KSTIEGTRYAMANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK
Ga0207690_102034801	3300025932	Corn Rhizosphere	RVIKSTIEGTRYAMANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK
Ga0207679_102426041	3300025945	Corn Rhizosphere	KYLGINDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSVQATPTSAYFDNSYVTELKQSGFLDGIWK
Ga0207658_103121001	3300025986	Switchgrass Rhizosphere	RYAVANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMKSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK
Ga0207703_112566801	3300026035	Switchgrass Rhizosphere	IKDPELLRQSFLYLSENLARDPAVPENVIQSMVQRMAQLNMVDAKGAQSTPTSAYLDNSYVNELKQSGFVDSVWK
Ga0208421_10228482	3300026058	Natural And Restored Wetlands	HHDVVVRLIKSTVEGIRYAISNEDATKRIISKYLGVTDSDLLRQSYLYVADTFVREPFVPESVMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAALKQAGVLDKIWK
Ga0207678_100343411	3300026067	Corn Rhizosphere	IEGTRYAMANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK
Ga0207708_109325772	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	EATKFAMSNEDFTKRAISKYLGITDPDLQRQSYQYIGETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAELKQSGFLDSVWK
Ga0207641_113085071	3300026088	Switchgrass Rhizosphere	GTRYAMANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK
Ga0209387_11697932	3300027639	Agricultural Soil	AVTNEDSTKRIIGKYLGISDGDLLRQSYLYVVDTFVREPFVPESVIQAMVQRMVEVNMIDVKSAQATLTTAYYDNSYVAELKQTGFLDNIWK
Ga0209466_10625812	3300027646	Tropical Forest Soil	RYAVANEEYTKKLIARYLNISDPDLLRQSYLYVTESFVREPFVPESTVRSMVERMVQLNLVDAKAAQSTLTTAYFDNTFVAELKQSGFLDSLWK
Ga0209178_12070482	3300027725	Agricultural Soil	AITNEDYTKRLIAKYLGITDNDLLRQSFLYVTETFVREPFVPEGTMQSMVQRMVQVNMIDAKSVQATPTSAYFDNSYVTELKQSGFLDGIWK
Ga0209811_100413841	3300027821	Surface Soil	MSNEDFTKRAISKYLGITDPDLQRQSYQYIGETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAELKQSGFLDSVWK
Ga0209814_103637652	3300027873	Populus Rhizosphere	NDADLLRQSYLYVSETFVREPFVPESTMQSMVQRMAQVNMIDAKSAQSTPTSAYFDNSYVAELKQSGFLDSVWK
Ga0209814_105200672	3300027873	Populus Rhizosphere	IKTTIEATKHATTNEEFTKKLIAKYLGVNDPDVLRQSYSYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQSMPTSAYFDNSFVAELKQSGFIDNVWK
Ga0209465_101988801	3300027874	Tropical Forest Soil	AVDAAPRNFLGQSGAVLADLLRQSYLYVTESFVREPFVPESTVRSMVERMVQLNLVDAKAAQSTPTTAYFDNTFVAELKQSGFLDSLWK
Ga0207428_102524071	3300027907	Populus Rhizosphere	HRDLVVRVIKSTIEGTRYAVANEDYTKRLIAKYLGISDNDLLRQSFLYVTETFVREPFVPESTMKSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVTELKQSGFLDGIWK
Ga0209382_119591371	3300027909	Populus Rhizosphere	KYLGVTDADLLRESFLYIRETFVREPFVPESTVQSMVQRMVQVNMIDVKSAQSTPTSAYFDNAYVAELKQSGFLDSLWK
Ga0222749_107341572	3300029636	Soil	ISDPDLLRQSYLYVTESFVREPFVPESTVRSMVERMVQLNLIDAKAAQSTPATAYFDNTFVAELKQSGFLDTLWK
Ga0310893_102259102	3300031892	Soil	IKSTVEGTRYAIANEDYTKGLIAKYLGINDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSVQATPTSAYFDNSYVTELKQSGFLDGIWK
Ga0310903_103832311	3300032000	Soil	YAIAYEDYTKGLIAKYLGINDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSVQATPTSAYFDNSYVAELKQSGFLDGIWK
Ga0310906_109810691	3300032013	Soil	NEDYTRRLIAKYLGITDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSVQATPTSAYFDNSYVAELKQSGFLDGIWK
Ga0307470_110140661	3300032174	Hardwood Forest Soil	TVEATKFAVSNEDFTKRTISKYLGITDPDLQRQSYQYIGETFVREPFVPESTMQSMVQRMVQVNMIDAKSAQTTPTSAYFDNSYVAELKQSGFLDSVWK
Ga0307471_1026543991	3300032180	Hardwood Forest Soil	VEGMKYVTENEDYTKKLIARYLSISDAEVLQQSYQYIVESFVKDPSVPESTVKSMVERMAQLNLIDATAARATPTSAYFDNSFVAELRQSGFFDRLWK
Ga0310810_100533741	3300033412	Soil	GINDNDLLRQSFLYVTETFVREPFVPESTMQSMVQRMVQVNMIDAKSVQATPTSAYFDNSYVTELKQSGFLDGIWK
Ga0326726_102922191	3300033433	Peat Soil	TVEATKLVSANEDFTKRLIGKYLGITDAELLRQSYAYVTDNFARDPAVPENVMRSMVQRMAQLNMIDTKAAQATPNSAFYDNSYVNELKQSGFLDSVWK
Ga0316630_100600703	3300033487	Soil	ATKLAIANEEFTKRTIAKHLGVSDPELLRLNYLYVSDTFVREPFVPDAAMQSMVQRMVQVNMIDAKSAQTTPTSAYYDNSFVNELKQSGFLDAVWK
Ga0247830_114992221	3300033551	Soil	ISNEDATKRIISKYLGVTDSDLLRQSYLYVADTFVREPFVPESVMQSMVQRMVQVNMIDAKSAQATPTSAYFDNSYVAALKQAGVLDKIWK
Ga0364925_0013361_2_244	3300034147	Sediment	GKYLGIADAELLRQSYAYVTENFARDPSVPESILQSMVQRMAQLNMIDAKAAQSTPTSAYYDNSFVNELKQSGFLASVWK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067213

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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