NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F067314

Metagenome / Metatranscriptome Family F067314

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067314
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 60 residues
Representative Sequence VPRLWVKLHTSAELKSIRIAVPTVLGELRFGHTTSVSSGNGWVGVSCFGKVSGSCAVCYGG
Number of Associated Samples 75
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 12.90 %
% of genes near scaffold ends (potentially truncated) 92.80 %
% of genes from short scaffolds (< 2000 bps) 97.60 %
Associated GOLD sequencing projects 75
AlphaFold2 3D model prediction Yes
3D model pTM-score0.14

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (64.800 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere
(72.800 % of family members)
Environment Ontology (ENVO) Unclassified
(92.800 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant surface
(82.400 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.14
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF00078RVT_1 0.80


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A64.80 %
All OrganismsrootAll Organisms35.20 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005841|Ga0068863_102616629All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii513Open in IMG/M
3300009972|Ga0105137_103041Not Available732Open in IMG/M
3300009972|Ga0105137_107263Not Available575Open in IMG/M
3300009976|Ga0105128_118408All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum535Open in IMG/M
3300009980|Ga0105135_108391Not Available753Open in IMG/M
3300009980|Ga0105135_131234Not Available502Open in IMG/M
3300009981|Ga0105133_119236Not Available593Open in IMG/M
3300009990|Ga0105132_132009All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum567Open in IMG/M
3300009992|Ga0105120_1043690Not Available557Open in IMG/M
3300009993|Ga0105028_133204Not Available577Open in IMG/M
3300009994|Ga0105126_1005145All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum1096Open in IMG/M
3300009994|Ga0105126_1012338Not Available837Open in IMG/M
3300009994|Ga0105126_1054200All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum512Open in IMG/M
3300009995|Ga0105139_1047628Not Available746Open in IMG/M
3300009995|Ga0105139_1050052All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum733Open in IMG/M
3300009995|Ga0105139_1124493All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii501Open in IMG/M
3300010371|Ga0134125_11902685Not Available647Open in IMG/M
3300010373|Ga0134128_11594089All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum718Open in IMG/M
3300010373|Ga0134128_12789191Not Available538Open in IMG/M
3300010400|Ga0134122_12317199Not Available583Open in IMG/M
3300010401|Ga0134121_11695493Not Available655Open in IMG/M
3300010401|Ga0134121_12333482All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum574Open in IMG/M
3300014968|Ga0157379_11452577All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii666Open in IMG/M
3300015280|Ga0182100_1056822Not Available613Open in IMG/M
3300015280|Ga0182100_1091503Not Available519Open in IMG/M
3300015290|Ga0182105_1088833Not Available541Open in IMG/M
3300015290|Ga0182105_1107161Not Available503Open in IMG/M
3300015293|Ga0182103_1021088All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum822Open in IMG/M
3300015293|Ga0182103_1074356Not Available564Open in IMG/M
3300015297|Ga0182104_1082979Not Available577Open in IMG/M
3300015301|Ga0182184_1063366Not Available592Open in IMG/M
3300015306|Ga0182180_1037241Not Available702Open in IMG/M
3300015306|Ga0182180_1082952Not Available528Open in IMG/M
3300015309|Ga0182098_1119634Not Available515Open in IMG/M
3300015310|Ga0182162_1130502Not Available502Open in IMG/M
3300015311|Ga0182182_1082653All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii581Open in IMG/M
3300015311|Ga0182182_1108732Not Available525Open in IMG/M
3300015312|Ga0182168_1114248All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii541Open in IMG/M
3300015315|Ga0182120_1048127All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum749Open in IMG/M
3300015315|Ga0182120_1055245Not Available713Open in IMG/M
3300015316|Ga0182121_1084115All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii630Open in IMG/M
3300015317|Ga0182136_1074063All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii644Open in IMG/M
3300015317|Ga0182136_1103087Not Available569Open in IMG/M
3300015320|Ga0182165_1133013Not Available525Open in IMG/M
3300015325|Ga0182148_1056056Not Available716Open in IMG/M
3300015325|Ga0182148_1120157All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii543Open in IMG/M
3300015326|Ga0182166_1118253Not Available545Open in IMG/M
3300015327|Ga0182114_1088157All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum646Open in IMG/M
3300015327|Ga0182114_1131406Not Available550Open in IMG/M
3300015327|Ga0182114_1152977Not Available515Open in IMG/M
3300015329|Ga0182135_1070924All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum681Open in IMG/M
3300015329|Ga0182135_1146833Not Available514Open in IMG/M
3300015330|Ga0182152_1107335Not Available583Open in IMG/M
3300015331|Ga0182131_1085934Not Available638Open in IMG/M
3300015331|Ga0182131_1135300All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum533Open in IMG/M
3300015331|Ga0182131_1143458All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii520Open in IMG/M
3300015332|Ga0182117_1144125Not Available540Open in IMG/M
3300015332|Ga0182117_1154987Not Available523Open in IMG/M
3300015333|Ga0182147_1081177Not Available679Open in IMG/M
3300015333|Ga0182147_1124241All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum573Open in IMG/M
3300015333|Ga0182147_1129155All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum564Open in IMG/M
3300015333|Ga0182147_1147487Not Available533Open in IMG/M
3300015335|Ga0182116_1126223Not Available588Open in IMG/M
3300015335|Ga0182116_1130205Not Available580Open in IMG/M
3300015336|Ga0182150_1121156All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum573Open in IMG/M
3300015337|Ga0182151_1135456Not Available548Open in IMG/M
3300015337|Ga0182151_1135920Not Available547Open in IMG/M
3300015337|Ga0182151_1144413Not Available534Open in IMG/M
3300015337|Ga0182151_1146390Not Available530Open in IMG/M
3300015338|Ga0182137_1100619All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum645Open in IMG/M
3300015338|Ga0182137_1157476Not Available531Open in IMG/M
3300015339|Ga0182149_1107710All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum615Open in IMG/M
3300015340|Ga0182133_1182317Not Available514Open in IMG/M
3300015348|Ga0182115_1205421Not Available631Open in IMG/M
3300015348|Ga0182115_1223402All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum602Open in IMG/M
3300015349|Ga0182185_1128314All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum745Open in IMG/M
3300015349|Ga0182185_1170701Not Available652Open in IMG/M
3300015350|Ga0182163_1259352All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum545Open in IMG/M
3300015350|Ga0182163_1278431Not Available524Open in IMG/M
3300015350|Ga0182163_1300145Not Available502Open in IMG/M
3300015352|Ga0182169_1179112All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum693Open in IMG/M
3300015352|Ga0182169_1270792Not Available550Open in IMG/M
3300015352|Ga0182169_1295924Not Available522Open in IMG/M
3300015353|Ga0182179_1002683All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum2913Open in IMG/M
3300015353|Ga0182179_1058339All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii1074Open in IMG/M
3300015353|Ga0182179_1125122Not Available787Open in IMG/M
3300015353|Ga0182179_1273282Not Available547Open in IMG/M
3300015353|Ga0182179_1314119Not Available511Open in IMG/M
3300015354|Ga0182167_1335510Not Available531Open in IMG/M
3300017412|Ga0182199_1104097All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum656Open in IMG/M
3300017412|Ga0182199_1180798Not Available529Open in IMG/M
3300017412|Ga0182199_1195035Not Available513Open in IMG/M
3300017432|Ga0182196_1011714All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum1185Open in IMG/M
3300017432|Ga0182196_1069849All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum665Open in IMG/M
3300017435|Ga0182194_1093483Not Available607Open in IMG/M
3300017439|Ga0182200_1018908All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum1034Open in IMG/M
3300017439|Ga0182200_1156615Not Available511Open in IMG/M
3300017446|Ga0182217_1122552Not Available611Open in IMG/M
3300017693|Ga0182216_1074437Not Available775Open in IMG/M
3300017693|Ga0182216_1083324All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum743Open in IMG/M
3300017693|Ga0182216_1215455Not Available510Open in IMG/M
3300025986|Ga0207658_12206393All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum500Open in IMG/M
3300028058|Ga0268332_1045522All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum619Open in IMG/M
3300028058|Ga0268332_1056754Not Available571Open in IMG/M
3300028058|Ga0268332_1059723Not Available560Open in IMG/M
3300028064|Ga0268340_1058777Not Available582Open in IMG/M
3300028141|Ga0268326_1009464Not Available570Open in IMG/M
3300028248|Ga0268312_1037735Not Available505Open in IMG/M
3300028262|Ga0268310_1045261Not Available529Open in IMG/M
3300028467|Ga0268333_1009091All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Panicum → Panicum hallii577Open in IMG/M
3300028472|Ga0268315_1019166Not Available566Open in IMG/M
3300028529|Ga0268311_1017994Not Available591Open in IMG/M
3300032465|Ga0214493_1136160All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum573Open in IMG/M
3300032469|Ga0214491_1141000Not Available566Open in IMG/M
3300032469|Ga0214491_1167441Not Available506Open in IMG/M
3300032502|Ga0214490_1120483Not Available597Open in IMG/M
3300032590|Ga0214489_1040183All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum → Panicum sect. Hiantes → Panicum virgatum703Open in IMG/M
3300032781|Ga0314742_1000108All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida6211Open in IMG/M
3300032916|Ga0314734_1073211Not Available688Open in IMG/M
3300032916|Ga0314734_1080355Not Available652Open in IMG/M
3300032959|Ga0314738_1014837Not Available1307Open in IMG/M
3300033523|Ga0314768_1056484All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → Liliopsida → Petrosaviidae → commelinids → Poales → Poaceae → PACMAD clade → Panicoideae → Panicodae → Paniceae → Panicinae → Panicum1312Open in IMG/M
3300033532|Ga0314767_1173343Not Available541Open in IMG/M
3300033542|Ga0314769_1287297Not Available552Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Switchgrass Phyllosphere72.80%
Switchgrass AssociatedHost-Associated → Plants → Unclassified → Unclassified → Unclassified → Switchgrass Associated12.00%
PhyllosphereHost-Associated → Plants → Phyllosphere → Unclassified → Unclassified → Phyllosphere8.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300009972Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_224 metaGHost-AssociatedOpen in IMG/M
3300009976Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_186 metaGHost-AssociatedOpen in IMG/M
3300009980Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_219 metaGHost-AssociatedOpen in IMG/M
3300009981Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_208 metaGHost-AssociatedOpen in IMG/M
3300009990Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_206 metaGHost-AssociatedOpen in IMG/M
3300009992Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_108 metaGHost-AssociatedOpen in IMG/M
3300009993Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaGHost-AssociatedOpen in IMG/M
3300009994Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_171 metaGHost-AssociatedOpen in IMG/M
3300009995Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - LS_227 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015280Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015290Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015293Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015297Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015301Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015306Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015309Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_09MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015310Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015311Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015312Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015315Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015316Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015317Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015320Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015325Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015326Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015327Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015329Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015330Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015331Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015332Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015333Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015335Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015336Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015337Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015338Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015339Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_12JUL2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015340Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_20JUN2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015348Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_31MAY2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015349Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015350Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015352Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015353Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_MAIN_22AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300015354Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_01AUG2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017412Switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017432Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017435Switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017439Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_12SEP2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017446Switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300017693Switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_03OCT2016_LD1 MGHost-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028058Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028064Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_28AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028141Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_17JUL2017_LD1Host-AssociatedOpen in IMG/M
3300028248Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_NF_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028262Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R3_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028467Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_07AUG2017_LD1Host-AssociatedOpen in IMG/M
3300028472Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300028529Phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_05JUN2017_LD1Host-AssociatedOpen in IMG/M
3300032465Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032469Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R2_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032502Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R1_MAIN_12JUL2016_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032590Metatranscriptome of phyllosphere microbial comminities from switchgrass, GLBRC, Michigan, United States - G5R4_NF_31MAY2016_LR3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032781Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_17JUL2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032916Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_MAIN_26JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300032959Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R4_NF_26JUN2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033523Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R2_NF_18SEP2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033532Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_NF_18SEP2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033538Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R1_MAIN_28AUG2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300033542Metatranscriptome of switchgrass phyllosphere microbial communities from Michigan, USA - G5R3_NF_18SEP2017_LR1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0068863_10261662923300005841Switchgrass RhizosphereRLWVKLHTSAELKSIRIAVPTVLGELRCGHITSASSGNGRVGVSGFGKVFGSCAVCYGG*
Ga0105137_10304113300009972Switchgrass AssociatedVVPRLWVKLHTSAELKSIRIVVPTVLGELRFGHTTITSSGNGWFGVSCFGKVSGSCAVCYGG
Ga0105137_10726313300009972Switchgrass AssociatedMVPHLWVKLHTPAEFKPIRIAVPTVLSELQFGHTTSTSSGFGWVGVSVLEKVSGSYAVSYCG*
Ga0105128_11840813300009976Switchgrass AssociatedGTPLVGKVYTSTELKTIRIVVLTVLSGLRFGHITSTFSGDGWVGVSCFEKVSGSCAVCYGGRGVR*
Ga0105135_10839113300009980Switchgrass AssociatedVVPRLWVKLHTSAELKSIRIAVPTVLGELWFGHTTSTSSGNGWVGVSYFGKVSGSRGVCY
Ga0105135_13123413300009980Switchgrass AssociatedRLWVKLHTSAESKAIRIAVPTVLGELRCGHITSVSSGWASVSGFGIVSGSCAVCNDGRGVR*
Ga0105133_11923613300009981Switchgrass AssociatedHTSTELKPIRIAVPMVPGELQFDHITSTSSENGWVGVSYFGKVSDSCAVCYGG*
Ga0105132_13200913300009990Switchgrass AssociatedSAELKSIRIVVPTVLGELRCGHITSVSSRIGWVGVSCFGKVSGGCAVCYGG*
Ga0105120_104369013300009992Switchgrass AssociatedSCCGTPLVGKVYTSAELKTIRIAVLTVLSGLRFGHITRVSSGNGWDGVCCFGKVSGSCAVCYGG*
Ga0105028_13320413300009993Switchgrass AssociatedVVPHLWVKLHTSAELKPIRIVVPTVLGELRFGHITSFWDEWFHGVMFWKVSG
Ga0105126_100514513300009994Switchgrass AssociatedRLWVKLHTSAELKAIRIAMPTVLGELRCGHITSVSLGWASVSCFGIVSGSCAVCYDGRGVR*
Ga0105126_101233823300009994Switchgrass AssociatedRAVVPRLWVKLHTSAELKSIRIAVPTVLGELRCGHATSVYSRKGWVGVSCFGKVSDICAVCYGG*
Ga0105126_105420013300009994Switchgrass AssociatedLHTSAELKAIRIAMLTVLSELRFDHITSVSSGNGWDVVCCFGKASGSGAVCYGG*
Ga0105139_104762823300009995Switchgrass AssociatedVVPRLWVKLHTSAELKPIRIAVPTVLGELRFGHTTSVSSGNGWVGVSCFGKVSGSCA
Ga0105139_105005213300009995Switchgrass AssociatedVVPRLWVKLHTSAELKSIRIAVPMVLGELRFGHTTSVSSGNEWVGVSHFGKVSGSGVVCYGG*
Ga0105139_112449313300009995Switchgrass AssociatedCCGTPLVGKVYTSAKLKTIRITVLTVLSGLRFGHITSVSSGNGWVGVSCFGKMSGSCAVCYDG*
Ga0134125_1190268523300010371Terrestrial SoilLCWDLHRHDGVRDVVSYLWVKLHASAELKAIRIAVPTVLGELRCGHTTSVSLGWAGVSYFGIVSGSCAVCNDGRGVR*
Ga0134128_1159408913300010373Terrestrial SoilRHYGVRAVVPRLWVKLHTSAELKSIRIVMPTVLGELRCGHITSVSSGNGWVGVSCFGKVSGSCAVCYGG*
Ga0134128_1278919113300010373Terrestrial SoilGDRAVVPRLWVKFHTSAEFQSIRIAMPTVLGELWFGHTTSISFGNGWVGVSCFGKLSGSCVVCYGG*
Ga0134122_1231719913300010400Terrestrial SoilLHTSAESKAIRIAVPTVLCELRCGHITSVSSGWASVSCFDIVSGSCAVCYDGRGVR*
Ga0134121_1169549313300010401Terrestrial SoilMDKVYTSAELKTIRIAVLTVLSGLQFGHITSVSSENGWDGVCCFGKVSGSCAVCYGG*
Ga0134121_1233348213300010401Terrestrial SoilWVKLQTSAELKSIRIVVPTVLGELRSGHTTSISSGNGWVGVSYFGKVSGSCAVCYGGRGVR*
Ga0157379_1145257713300014968Switchgrass RhizosphereLLWVKLHTSAELKAIRIAVPTVLGELRCGHITSVLLGWAGVSCFGIVSGSCAVCYDGRGVR*
Ga0182100_105682233300015280Switchgrass PhyllosphereVAVPRLWVKLHTSAELKSIRIAVPTVLGELRCGHITSVPSGIGWVGVSCFGKVSGSCAVCYGG*
Ga0182100_109150313300015280Switchgrass PhyllosphereVGKVYTSAEIKTIRIAVLMVLSGLQFGHITSVSSGNGWDGVCCFGKVSGSCAVC
Ga0182105_108883313300015290Switchgrass PhyllosphereLHNSAELKSIRIAVPTVLGELRFGHTTSVSSGNRWVGVSCFGKVSDNCAVCYDG*
Ga0182105_110716113300015290Switchgrass PhyllosphereLWEKLHTSAELKSIRIAVPTILGELRCGHATSVSSGGGWVGVSCFGNVSGSCAMCYGR*
Ga0182103_102108823300015293Switchgrass PhyllosphereAVVSHLWVKLHTSTELKSIRIAVPTVLGELRFGHITSVSSGDGWDGVCCFGKVSGSCVVCYGG*
Ga0182103_107435623300015293Switchgrass PhyllosphereDRTAVPRLWVKLHTSADLKSIRIAVPTVLGELRFGHTTSVSSRNGWVGVSYFGKMCGSCAVCYGG*
Ga0182104_108297913300015297Switchgrass PhyllosphereGDRTVVPRLWIKLHTSAELKYIRIAVPMVLGELRFGHTTSVSSGNGGVGMSCFEKVSGSCAVCYGGRGVR*
Ga0182184_106336613300015301Switchgrass PhyllosphereDRAVVPRFVGKVYISAKLKTIRIDVLTVLSRLRFGHITSVSSGNGWDGVCGFGKVSGSCVVCYGG*
Ga0182180_103724123300015306Switchgrass PhyllosphereVVSYLWVKLHTSVELKAIRIAVPTVLGELRCGHITSVALGWAGVSCFGIVSGSCAVCYDGRGVR*
Ga0182180_108295213300015306Switchgrass PhyllosphereVVPRLWVKLHTSAELKSIRIAVPTVLGELRFGHTTSVSSGNGWVGVSCFGKVS
Ga0182098_111963423300015309Switchgrass PhyllosphereDRAVVLRLWIKLHISAELKSIRIVMPTVLGELRFGHTTSVSSGNGCVGVSCFGKVSGSCAMCYGRRGVR*
Ga0182162_113050213300015310Switchgrass PhyllosphereTSAELKSIRIAVPTVLGELRCGHITSVSSGKGWVGVSCFGKMSGSCAVCYGG*
Ga0182182_108265313300015311Switchgrass PhyllosphereAVVPHLWVKLYTSAELKPIRIAVPTVLGELRFGHTTSVSFRKGWIGVSCFEKVSGSCAVCYGGRGVR*
Ga0182182_110873213300015311Switchgrass PhyllosphereVKLHTSAELKAIRIAVPTVLGELRCGHITSVSLGRAGVSCFGIVSGSCGVCYDGRGVR*
Ga0182168_111424823300015312Switchgrass PhyllosphereVRVVVSYLWVKLHTSAELKAIRIAVPTVLGELRCGHITSVLLGWAGVSCFGMVSGSCAVCYDGRGVR*
Ga0182120_104812713300015315Switchgrass PhyllosphereSCCGTPLVGKVYTSAELKTIRIVVLTVLSGLRFGHITSVSSWNGWDGVCCFGKVSGSYVVCNDG*
Ga0182120_105524513300015315Switchgrass PhyllosphereMVPRLWVKLHTSAELKSIRIAVPTVLGELRFGHTTSVSSGNGWVGVSCFGKVSGSCAV
Ga0182121_108411513300015316Switchgrass PhyllosphereLHTSAELKAIRIAVPTVLGELRCGHITSVSLGWAGVSCFGMVSGSCAVCYDGRGVR*
Ga0182136_107406313300015317Switchgrass PhyllosphereLKSIRIAVPTVLGELRCGHITSVSSGNGRVGMSGFGKVSGSCAVCYGR*
Ga0182136_110308713300015317Switchgrass PhyllosphereVKLHTSAELKSIRIAVPTVLGELRCGHITSVSSGIGWVGMSCFEKVSGSCAVCYGGCGVR
Ga0182165_113301313300015320Switchgrass PhyllosphereSYLWVKLHTSAELKAIRIAVPTVLGELRCGHITSVSLGWAGVSCFGIVSGSCDVCYDGWGVR*
Ga0182148_105605613300015325Switchgrass PhyllosphereVRVVVSYLWVKLHTSAELKAIRIAVPTVLGELRCGHITSVLLGWAGVSCFGIVSGSCAMCYDGRGVR*
Ga0182148_112015713300015325Switchgrass PhyllosphereDRAVVPHFWVKLHVSAELKPIRIDVPTVLGELRFGHITSLWDGWFRGVSCFWKVSGSRAVSYCG*
Ga0182166_111825313300015326Switchgrass PhyllosphereYGDRAVVPRLWVKLHTSTELKSIRIAMPTVLGELRCGHITSVSSGNGWDGMSCFGKVSGRCAMCYGG*
Ga0182114_108815723300015327Switchgrass PhyllosphereVPRLWVKLHTSAELKSIRIAVPTVLGELRFGHTTSVSSGNGWVGVSCFGKVSGSCAVCYGG*
Ga0182114_113140623300015327Switchgrass PhyllosphereVKLHTSAKLKYIRIAVPTVMGELRFGHTTSISSGNGWVGVSCFGKVSGSYAVCYSR*
Ga0182114_115297713300015327Switchgrass PhyllosphereLWVKLHTSVELKPIRIGVATVLGELWFGHITSVSSGDGWDGVCCFGKMFGSCAVCYSG*
Ga0182135_107092413300015329Switchgrass PhyllosphereVKLHTSAELKPIRIAMPMVLGELRFGHITSVSTGDGWDCVCCFGKVFGSCAVCYGR*
Ga0182135_114683313300015329Switchgrass PhyllosphereAVPRLWVKLHTSAELKSIRIAVPKVLGELRCCHITSASSGNGRVGVSGFGKVFGSCAVCYDG*
Ga0182152_110733523300015330Switchgrass PhyllosphereVYTSAELKTIRIVVLTVLSGLRFGHITSVSSGNGWDGVCCFGKVSGSCAVCYGG*
Ga0182131_108593413300015331Switchgrass PhyllosphereGDRAVVPRLWVKLHTSAELKSIRIAVPTVLGELQCGHITSVSSGNGRVGVSCFEKVSGSCVVCYDG*
Ga0182131_113530013300015331Switchgrass PhyllosphereSAELKPIRIAVPTVLGELRFGHITSVSSGDGLDGMCYFGKVSGSCAVCYDG*
Ga0182131_114345813300015331Switchgrass PhyllosphereAELKSIRIAVPTVLGELRCGHITSVILGWAGVSCFGNVSGSCAVCYGG*
Ga0182117_114412513300015332Switchgrass PhyllosphereDGVRVVVSYLWVRLHTSAELKAIRIAVPTVLGELRCGHITSVSLGWAGVSCFGVVSGSCAVCYDGWGVR*
Ga0182117_115498713300015332Switchgrass PhyllosphereLWVKLHTSAELKPIRIAVPTVLSELWFGHTTSISSGNGWVGVSCFGEVSGSCAVCYGR*
Ga0182147_108117713300015333Switchgrass PhyllosphereKVYTSTELKTIRIAVLMVLSGLRFGHITSVSSGNGWDGVCCFGKVSGSCAVCYGG*
Ga0182147_112424123300015333Switchgrass PhyllosphereLWVKLHTSAELKSIRIAVPTVLGELRCGHITSVSSGIGWVGVSCFGKVSGNCAMCYDG*
Ga0182147_112915513300015333Switchgrass PhyllosphereWVKLHTSVELKPIRIAVPTVLGELRFGHITSVSFGDGWDGASCFRNVYGSSVVCYSG*
Ga0182147_114748713300015333Switchgrass PhyllosphereHTSVELKPIQIAVLMVLSGLWFVHMTSISSGDGWIGVSCFGRVSGSSAVCYGG*
Ga0182116_112622313300015335Switchgrass PhyllosphereHTSADLKSIRIAVPTVLGELRFGHTTSVSSRNGWVGVSYFGKMCGSCAVCYGG*
Ga0182116_113020513300015335Switchgrass PhyllosphereTSAELKSIRIAVPMVLGELRFGHTTSVSSGNGGVGMSCFEKVSGSCAVCCGK*
Ga0182150_112115613300015336Switchgrass PhyllosphereGDRVAVPRLWVKLHTSTELKPIRIAVPTVLGELRCGHITSVYLGWVGVSCFGNVSGSCAVCYGG*
Ga0182151_113545613300015337Switchgrass PhyllosphereRDAVPRLWVKLHTSAELKPIRIVVPTVLGELRCGHTTSVSSGNGWVGVSCFGNVSGSCAVCYGGRGVR*
Ga0182151_113592013300015337Switchgrass PhyllosphereVSKAVQPLQSVKSIRIAVPTVLGELRFGHITSVSSGNGWDGVSCFGKVSGNCAMC
Ga0182151_114441313300015337Switchgrass PhyllosphereHTSAELKSIRIAVPTVLGELRCDHITSVSSGNGWVGVSCFGEVSGSCAVCYGG*
Ga0182151_114639013300015337Switchgrass PhyllosphereQVALPRLWVKLHTSAELKSIRIAVPTVLGELRCGHITSISSGNGWVGVSCFGKGVR*
Ga0182137_110061923300015338Switchgrass PhyllosphereDRDVVLRLWIKLHISTELKPIRIAVLTVLGELRFGHITSVSSGIGWDGVSYFGKVSNSCAISYGG*
Ga0182137_115747613300015338Switchgrass PhyllosphereTPLVGKVYTSTELKTIQIAVLTVLSGLRFGHITSVSSGNGWDGVCCFGKVSGSCAVCYDG
Ga0182149_110771013300015339Switchgrass PhyllosphereRHYGDRVVVPRLWVKLHTSAELKSIRIVVPTVLGELRCGHITSVSSGIGWVGVSGFGKVFGRCAMCYGR*
Ga0182133_118231713300015340Switchgrass PhyllosphereWLCWDLHRHDGVRVVVSYLWVKLHTSAELKAIRIAVPTVLVELRCGHITNVSLGWAGVSCFGIVSGSCAVCYDGRGVR*
Ga0182115_120542113300015348Switchgrass PhyllosphereKLHTSAELKSIRIAVPTVLGELRFGHTTSVSSGNGWVGVSYFGKVSGSCTVCYGG*
Ga0182115_122340223300015348Switchgrass PhyllosphereAELQASRIVVLTVFCALRFGHITSVSSGNGWDGVSCFGKVSGSCAVCYGG*
Ga0182185_112831413300015349Switchgrass PhyllosphereRLWVKLHTTAELKSIRIAVPTVQGELRFGHTISVSSGNEWVGVSGFGKVSGGCDVCYGRCGVR*
Ga0182185_117070113300015349Switchgrass PhyllosphereKLHTSAELKAIRIAVPTVLGELRCGHITSVSLGWAGVSCFGFVSSNCAVCYDGRGVR*
Ga0182163_125935213300015350Switchgrass PhyllosphereHTSTELKSIRIAVLMVLSELWFGHITSVSSGNGWDGVSCFGKVSGSCAMCYGG*
Ga0182163_127843113300015350Switchgrass PhyllosphereHTSAELKAIRIAVPTVLGELRCGHITSVSLGWASVSCFGIVSGSCAVCYDGRGVR*
Ga0182163_130014513300015350Switchgrass PhyllosphereKLHTSAELKSIRIVVPTVLGELRCGHITSVSSGNGRVGMSGFGKVSGSCAVCYGR*
Ga0182169_117911213300015352Switchgrass PhyllosphereQPLHSVKHIRITVLTVLSGLRFGHITSVSSLVGWDGVSCFLKVFGSSAVCYGG*
Ga0182169_127079213300015352Switchgrass PhyllosphereMVPHLWVKLHTSAELKPIRIAVHMVLGELRFGHTTSTSFGIGLGWLECFGKVSGSRARATADEESGSIKT*
Ga0182169_129592413300015352Switchgrass PhyllosphereRAVVPHLWVKLHTFAELKPIRIAVPTVLGELRFGHITSLWDGWFRGMSCFWKVSGSRAVSYCG*
Ga0182179_100268353300015353Switchgrass PhyllosphereDLHRHYGDRAVVPRLWVKLHTSAELKSIRIAVPTVLGKLRCGHTTSVSSGKGWVSVSGFGKVSGNCAMCYGGWGVW*
Ga0182179_105833913300015353Switchgrass PhyllosphereYGDRAVVPRLWVKLHTSVELKSIRIAVPTVPGELRCGHITSASSGNGRVGMSCLGKVSGSCAVCYGG*
Ga0182179_112512213300015353Switchgrass PhyllosphereVVPHLWVKLYTSAELKPIRIAVPTVLGELRFGHITSFWDGWFHGVSCFWKVSGRCAVSYCG*
Ga0182179_127328213300015353Switchgrass PhyllosphereKLHTSAELKAIRIAVPTVLGELRCGHITSVSLGWAGVSCFGFVPGSCVVCYDGRGVR*
Ga0182179_131411923300015353Switchgrass PhyllosphereGDRAVVPRLWLKLHTSAELKSIRIAVPTILGELRFGHTTSVSSVNGWVGVSCFGKVFGSCAMCYDG*
Ga0182167_133551023300015354Switchgrass PhyllosphereYGDRAVVPRLWVKLHTSAELKSIRITVPTVLGELRCGHITSVSSGNGWVGVRCFGKVSGSCAVCYGG*
Ga0182199_110409713300017412Switchgrass PhyllosphereRLWVKLHTSAELKSIRIAVPTVLGELRYGHTTSVSSRIGWVGVSCFEKVSGSCAVCYDG
Ga0182199_118079813300017412Switchgrass PhyllosphereAVVPRLWVKLHTSAELKSIRIAVPMVLGELRCGHITSVSSGNGWVGVSGFGKVPGSCAMCYGG
Ga0182199_119503513300017412Switchgrass PhyllosphereDLHRHDGVRDVVSYLWVKLHTSAELKAIRIAVPTVLGELRCGHITSVSMGWASVSYFGIVSGSCAVCYDGRGVR
Ga0182196_101171413300017432Switchgrass PhyllosphereSAELKAIRIAVPTVLGELRCGHITSVSLGWAGVSCFGIVSDSCAVCYDGRGVR
Ga0182196_106984913300017432Switchgrass PhyllosphereAELKSIRIAVPAVLGELRFGHTTSISSGNGWVGVSHFGKVSGRCAVCYNG
Ga0182194_109348313300017435Switchgrass PhyllosphereMVPRLWVKLHTSAELKSIRIAVPTVLGELRCGHITSVSSGNGRVGVSGFGKVSGRCAVCYGECGVR
Ga0182200_101890813300017439Switchgrass PhyllosphereKLHTSVELKYIRIAVPTVLGELRFGHTTSVSSRNGWVGVSCFGKVSGSCAVCYGG
Ga0182200_115661513300017439Switchgrass PhyllosphereVVPRLWVKLHTSAELKSIRIAMPTVLDELRFGHTTSVSSGNGWVGVSHFGKVSGSCAMCYGG
Ga0182217_112255213300017446Switchgrass PhyllosphereVVPHLWVKLHTSAGLKSIRIVVPTILGELRCGHTTSVSSGSERVGVSGSGKVSSSCAVCY
Ga0182216_107443723300017693Switchgrass PhyllosphereWVKLHTSAELKSIRIAVPTVLGELRCGHATSVSFGNGWVGVSCFGKVSGICAVCYGG
Ga0182216_108332413300017693Switchgrass PhyllosphereGDRAVVSRLWVKLHTSAELKSIRIAVPTVLCELRCGHITSVSSGNGWVDMSYFGKVSSSCAVCYSG
Ga0182216_121545513300017693Switchgrass PhyllosphereSAELKTIRIAVLTVLSGLRFGHITSVSSGNGWDGVCYFGKVSGSCAVCYDR
Ga0207658_1220639313300025986Switchgrass RhizosphereKLHTSAELKSIRIVVPTVLGELQCGHITSVSSGNGWVGVSCFRKVSSNCAVCYGG
Ga0268332_104552213300028058PhyllosphereLHTSAELKSIRIAVPTVLGELRCGHITSASSGNGRVGVSGFGKVSGSCAVCYGG
Ga0268332_105675423300028058PhyllosphereKLHTSAELKSIRIVVPTVLGELRYGHTTSVSSRNGWVGVSCFGKVSGRCAVYYGE
Ga0268332_105972313300028058PhyllosphereVGKVYTFAELKTIRIAVLTVLSGLRFGHITSVSPGNGWDGVCCFGKVSGSCAVCYDG
Ga0268340_105877713300028064PhyllosphereVGKVYTSAELKTIRIAVLTVLSGLRFGHITSVSSGNGWDGVCCFGKVSGGCAVCY
Ga0268326_100946413300028141PhyllosphereRDVVSYLWVKLHTSAELKAIRIVVPTVLGELRCGHITSVSLGWAGVSCFGIVFGSCAVCYDGRGVR
Ga0268312_103773513300028248PhyllosphereGDRVAVPRLWVKLHTSAELKSIRIAVPTVLGELRCGHITSVSSGNGRVGVSCFGRVSGSCVVCYGG
Ga0268310_104526113300028262PhyllosphereTRLWVKLHTSAELKAIRIAVPTELGELRCGHITSVSLGWAGVSCFGIVSGSCAVCYDGRGVR
Ga0268333_100909113300028467PhyllosphereAVVPHLWVKLHTFAELKPIRIAVPTVLGELRFGHITSLWDGWFRGMSCFWKVSGSRAVSYCR
Ga0268315_101916613300028472PhyllosphereVVPHLWVRLHTSAEFKTYSNSRATVLGELRFGHITSFWDGWFHGVSVFGKVSGSCTVC
Ga0268311_101799413300028529PhyllosphereYYGDRAVVPRLWVKLHTSAELKSIRIAVPTVLGELRCGHITSVSSGNGWVGVSCFGKVSGSCAVCYGG
Ga0214493_113616013300032465Switchgrass PhyllosphereRAVVPRLWVKLHTSAELKSIRIVMPTVQGELRCGHITSVSSENGWVGVSCFGKVSGNCAMCYGG
Ga0214491_114100013300032469Switchgrass PhyllosphereVAVPRLWVKLHSSAELKSIRIVMPSVQGELRCGHITSVSLGWAGVSCFEIMSGSGAVCYDGRGVR
Ga0214491_116744113300032469Switchgrass PhyllosphereVVPRLWVKLHTSAELKSIRIAVPTVLGELRFGHTTSVSSGNGWVGVSHFGKVSGSCAVCY
Ga0214490_112048313300032502Switchgrass PhyllosphereVVPHLWVKLHTSAELKSIRIVMPTVLGELRFVHTNSVSSGNGWVDVSCFGKVSDSCAV
Ga0214489_104018313300032590Switchgrass PhyllosphereDRAVVPRLWVKLHTSAELKSIRIAVPTVLGELRFGHTISVSSGIGWVGVSCFGKVSGSYAVCYGG
Ga0314742_1000108123300032781Switchgrass PhyllosphereVVSYLWVKLHTSAESKAIRIAVPTVLGELRCGHITSVLLGWAGVSRFGIESGSCAVCYDGRGVR
Ga0314734_107321123300032916Switchgrass PhyllosphereLHTSAELKAIRIAVPTVLGELRCGHITSVSLGWAGVSSFGIVSGSCAVCYDGRGVR
Ga0314734_108035513300032916Switchgrass PhyllosphereMASMGSAPTLRWSCCGIPLVGKVYTSAELKTIRIAVLTVLSGLRFGHITSVSFENGWDVVSCFGKISSNCDVCY
Ga0314738_101483723300032959Switchgrass PhyllosphereVVPRLWVKLHTSAELKSIRIAVPTVLGELRCGHSTSVSFGIGWVGVSCFKKVSS
Ga0314768_105648413300033523Switchgrass PhyllosphereVVSYLWVKLHTSAESKAIRIAVPTVLGELRCGHITSALLGWVGVSHFGIESGS
Ga0314767_117334323300033532Switchgrass PhyllosphereVKLHTSAELKSIRIAVPTVLGELRCGLTTSVSSGKGWVGMSCFGKVSGSCAVCYDG
Ga0314755_109936813300033538Switchgrass PhyllosphereVVLHLWVKLHTSAELKSIRIAVPTVLGELRCGHITSISSGNGWVGVSCFGKV
Ga0314769_128729713300033542Switchgrass PhyllosphereVVSYLWVKLHTFTESKAIRIAVPTVLGELRCGHITSVLLGWAAVSRFGIESGSCAVCYDGRGVR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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