Metagenome Family F067351

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067351
Family Type	Metagenome
Number of Sequences	125
Average Sequence Length	56 residues
Representative Sequence	MSWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVIVRTKKDIVRG
Number of Associated Samples	66
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	21.26 %
% of genes near scaffold ends (potentially truncated)	26.40 %
% of genes from short scaffolds (< 2000 bps)	71.20 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.400 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (41.600 % of family members)
Environment Ontology (ENVO)	Unclassified (75.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (72.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.16% β-sheet: 0.00% Coil/Unstructured: 48.84%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF11351	GTA_holin_3TM	22.40
PF09374	PG_binding_3	11.20
PF05838	Glyco_hydro_108	5.60
PF00182	Glyco_hydro_19	2.40
PF00959	Phage_lysozyme	1.60
PF13884	Peptidase_S74	1.60
PF03237	Terminase_6N	1.60
PF13392	HNH_3	1.60
PF08291	Peptidase_M15_3	0.80
PF09834	DUF2061	0.80
PF02945	Endonuclease_7	0.80
PF13640	2OG-FeII_Oxy_3	0.80
PF01464	SLT	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG3926	Lysozyme family protein	General function prediction only [R]	5.60
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	2.40
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	2.40

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.20 %
Unclassified	root	N/A	28.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.40 %
Unclassified	root	N/A	28.80 %
Viruses	superkingdom	All Organisms → Viruses	16.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.40 %
Unclassified	root	N/A	28.80 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	12.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.00 %
Unclassified	root	N/A	28.80 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	12.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	36.00 %
Unclassified	root	N/A	28.80 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	12.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.60 %

Name	Rank	Taxonomy	Distribution
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	35.20 %
Unclassified	root	N/A	28.80 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	12.00 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.80 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Methylococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales	35.20 %
Unclassified	root	N/A	28.80 %
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	10.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.80 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Methylococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	35.20 %
Unclassified	root	N/A	28.80 %
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10.40 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.00 %
Haematospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Haematospirillum	0.80 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c006383	Not Available	2353	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1010875	All Organisms → cellular organisms → Bacteria → Proteobacteria	4913	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1069423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1125	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10038509	Not Available	3156	Open in IMG/M
3300001842\|RCM30_1054031	Not Available	928	Open in IMG/M
3300001842\|RCM30_1067908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	533	Open in IMG/M
3300001850\|RCM37_1017634	All Organisms → cellular organisms → Bacteria	2264	Open in IMG/M
3300001851\|RCM31_10189451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	634	Open in IMG/M
3300002091\|JGI24028J26656_1004005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2385	Open in IMG/M
3300002091\|JGI24028J26656_1007276	All Organisms → cellular organisms → Bacteria	1521	Open in IMG/M
3300002091\|JGI24028J26656_1010715	All Organisms → Viruses → Predicted Viral	1114	Open in IMG/M
3300002092\|JGI24218J26658_1000129	All Organisms → Viruses	54785	Open in IMG/M
3300002092\|JGI24218J26658_1002760	All Organisms → Viruses → Predicted Viral	4343	Open in IMG/M
3300002092\|JGI24218J26658_1016635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1066	Open in IMG/M
3300002301\|JGI24891J29808_1011830	Not Available	778	Open in IMG/M
3300002933\|G310J44882_10037519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1127	Open in IMG/M
3300003375\|JGI26470J50227_1000630	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14058	Open in IMG/M
3300003375\|JGI26470J50227_1013185	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1991	Open in IMG/M
3300003375\|JGI26470J50227_1055799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	672	Open in IMG/M
3300003375\|JGI26470J50227_1060985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	627	Open in IMG/M
3300003375\|JGI26470J50227_1063708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	605	Open in IMG/M
3300003375\|JGI26470J50227_1064478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	600	Open in IMG/M
3300003787\|Ga0007811_1003831	All Organisms → cellular organisms → Bacteria	1807	Open in IMG/M
3300003789\|Ga0007835_1003458	All Organisms → cellular organisms → Bacteria → Proteobacteria	1744	Open in IMG/M
3300003789\|Ga0007835_1005177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1323	Open in IMG/M
3300003789\|Ga0007835_1012341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	742	Open in IMG/M
3300003816\|Ga0007845_100181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	851	Open in IMG/M
3300003852\|Ga0031655_10026378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	2725	Open in IMG/M
3300003852\|Ga0031655_10055471	Not Available	1716	Open in IMG/M
3300003852\|Ga0031655_10073056	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300003852\|Ga0031655_10079068	All Organisms → cellular organisms → Bacteria → Proteobacteria	1361	Open in IMG/M
3300003852\|Ga0031655_10080916	Not Available	1341	Open in IMG/M
3300003852\|Ga0031655_10088489	Not Available	1265	Open in IMG/M
3300003852\|Ga0031655_10217019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	725	Open in IMG/M
3300003852\|Ga0031655_10255011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	659	Open in IMG/M
3300003852\|Ga0031655_10335614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	563	Open in IMG/M
3300003943\|Ga0007808_1000437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1504	Open in IMG/M
3300004448\|Ga0065861_1035659	All Organisms → Viruses → Predicted Viral	2258	Open in IMG/M
3300004684\|Ga0065168_1001458	All Organisms → cellular organisms → Bacteria	3941	Open in IMG/M
3300004684\|Ga0065168_1055058	Not Available	625	Open in IMG/M
3300004686\|Ga0065173_1024706	All Organisms → cellular organisms → Bacteria → Proteobacteria	1099	Open in IMG/M
3300004688\|Ga0065169_1000562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1513	Open in IMG/M
3300004774\|Ga0007794_10075891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1002	Open in IMG/M
3300004805\|Ga0007792_10078662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1002	Open in IMG/M
3300004806\|Ga0007854_10001570	Not Available	14449	Open in IMG/M
3300004807\|Ga0007809_10003174	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6537	Open in IMG/M
3300004807\|Ga0007809_10013956	All Organisms → cellular organisms → Bacteria → Proteobacteria	2892	Open in IMG/M
3300004807\|Ga0007809_10130415	Not Available	750	Open in IMG/M
3300004807\|Ga0007809_10139705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	719	Open in IMG/M
3300006071\|Ga0007876_1000883	All Organisms → cellular organisms → Bacteria	10725	Open in IMG/M
3300006072\|Ga0007881_1030527	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1456	Open in IMG/M
3300006108\|Ga0007862_1022360	All Organisms → cellular organisms → Bacteria → Proteobacteria	1397	Open in IMG/M
3300006113\|Ga0007858_1009059	All Organisms → cellular organisms → Bacteria → Proteobacteria	2459	Open in IMG/M
3300006113\|Ga0007858_1062809	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	783	Open in IMG/M
3300006120\|Ga0007867_1139552	Not Available	521	Open in IMG/M
3300006127\|Ga0007805_1002931	All Organisms → cellular organisms → Bacteria	5158	Open in IMG/M
3300006127\|Ga0007805_1008029	All Organisms → cellular organisms → Bacteria → Proteobacteria	2769	Open in IMG/M
3300006128\|Ga0007828_1003982	All Organisms → Viruses → Predicted Viral	3242	Open in IMG/M
3300006128\|Ga0007828_1018381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1469	Open in IMG/M
3300009159\|Ga0114978_10101400	All Organisms → cellular organisms → Bacteria → Proteobacteria	1901	Open in IMG/M
3300013093\|Ga0164296_1017645	Not Available	4687	Open in IMG/M
3300013093\|Ga0164296_1275647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	633	Open in IMG/M
3300013093\|Ga0164296_1394285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	513	Open in IMG/M
3300020710\|Ga0214198_1005754	Not Available	1710	Open in IMG/M
3300020710\|Ga0214198_1019416	Not Available	851	Open in IMG/M
3300020724\|Ga0214244_1038957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	661	Open in IMG/M
3300020724\|Ga0214244_1048389	Not Available	585	Open in IMG/M
3300021122\|Ga0214195_1034012	Not Available	525	Open in IMG/M
3300021125\|Ga0214211_1012066	Not Available	857	Open in IMG/M
3300021127\|Ga0214193_1033497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	594	Open in IMG/M
3300021128\|Ga0214176_1013821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	805	Open in IMG/M
3300021131\|Ga0214206_1000872	Not Available	7651	Open in IMG/M
3300021131\|Ga0214206_1001677	Not Available	5016	Open in IMG/M
3300021131\|Ga0214206_1005761	Not Available	2065	Open in IMG/M
3300021131\|Ga0214206_1010441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1330	Open in IMG/M
3300021131\|Ga0214206_1023146	Not Available	750	Open in IMG/M
3300021142\|Ga0214192_1089263	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	864	Open in IMG/M
3300021142\|Ga0214192_1178011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	524	Open in IMG/M
3300022602\|Ga0248169_102328	Not Available	23887	Open in IMG/M
3300022602\|Ga0248169_106712	Not Available	10617	Open in IMG/M
3300022602\|Ga0248169_108147	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8983	Open in IMG/M
3300025358\|Ga0208504_1008867	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1487	Open in IMG/M
3300025358\|Ga0208504_1026803	Not Available	751	Open in IMG/M
3300025365\|Ga0208621_1009159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1139	Open in IMG/M
3300025369\|Ga0208382_1001016	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8276	Open in IMG/M
3300025379\|Ga0208738_1000017	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	56396	Open in IMG/M
3300025383\|Ga0208250_1001686	Not Available	5389	Open in IMG/M
3300025383\|Ga0208250_1024250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	999	Open in IMG/M
3300025389\|Ga0208257_1024484	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	913	Open in IMG/M
3300025392\|Ga0208380_1058971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	543	Open in IMG/M
3300025410\|Ga0208875_1052973	Not Available	634	Open in IMG/M
3300025413\|Ga0208614_1042332	Not Available	687	Open in IMG/M
3300025413\|Ga0208614_1055321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	582	Open in IMG/M
3300025417\|Ga0208616_1064197	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	516	Open in IMG/M
3300025418\|Ga0208253_1030471	All Organisms → cellular organisms → Bacteria → Proteobacteria	1010	Open in IMG/M
3300025429\|Ga0208500_1003873	All Organisms → cellular organisms → Bacteria	2792	Open in IMG/M
3300025429\|Ga0208500_1016142	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300025466\|Ga0208497_1002000	Not Available	7377	Open in IMG/M
3300025598\|Ga0208379_1025319	Not Available	1651	Open in IMG/M
3300025598\|Ga0208379_1068857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	886	Open in IMG/M
3300027896\|Ga0209777_10070978	All Organisms → Viruses → Predicted Viral	3056	Open in IMG/M
3300027896\|Ga0209777_10078755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2867	Open in IMG/M
3300027896\|Ga0209777_10231102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1466	Open in IMG/M
3300027896\|Ga0209777_10232394	Not Available	1461	Open in IMG/M
3300027896\|Ga0209777_10251673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	1389	Open in IMG/M
3300027896\|Ga0209777_10266435	Not Available	1340	Open in IMG/M
3300027896\|Ga0209777_10508794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	887	Open in IMG/M
3300027896\|Ga0209777_10547041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	846	Open in IMG/M
3300027896\|Ga0209777_10575281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	819	Open in IMG/M
3300027896\|Ga0209777_10613812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	785	Open in IMG/M
3300027896\|Ga0209777_10702818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	719	Open in IMG/M
3300027896\|Ga0209777_10704238	Not Available	718	Open in IMG/M
3300027896\|Ga0209777_11043479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	556	Open in IMG/M
3300031759\|Ga0316219_1054437	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1632	Open in IMG/M
3300031759\|Ga0316219_1113716	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1027	Open in IMG/M
3300031759\|Ga0316219_1183023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	759	Open in IMG/M
3300031813\|Ga0316217_10044457	All Organisms → cellular organisms → Bacteria → Proteobacteria	2454	Open in IMG/M
3300031884\|Ga0316220_1012060	Not Available	4855	Open in IMG/M
3300032117\|Ga0316218_1053612	Not Available	1715	Open in IMG/M
3300032560\|Ga0316223_1065661	Not Available	1366	Open in IMG/M
3300032561\|Ga0316222_1047324	All Organisms → cellular organisms → Bacteria → Proteobacteria	1990	Open in IMG/M
3300032561\|Ga0316222_1061722	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1641	Open in IMG/M
3300032605\|Ga0316232_1183680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → unclassified Methylococcales → Methylococcales bacterium	854	Open in IMG/M
3300032676\|Ga0316229_1293047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Haematospirillum	597	Open in IMG/M
3300032677\|Ga0316227_1018350	Not Available	3561	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	99.20%
Marine	Environmental → Aquatic → Marine	0.80%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	90.40%
Lake	Environmental → Aquatic → Freshwater → Lake	5.60%
Lotic	Environmental → Aquatic → Freshwater → Lotic	3.20%
Coastal	Environmental → Aquatic → Marine → Coastal	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	47.20%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	17.60%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	12.80%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	12.80%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	5.60%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	41.60%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	17.60%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	12.80%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	12.80%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	5.60%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	4.80%
Marine Plankton	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton	3.20%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.80%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300000553	Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300001842	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM30, ROCA_DNA203_0.2um_MCP-S_C_2b	Environmental	Open in IMG/M
3300001850	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM37, ROCA_DNA234_0.2um_Ob_C_2a	Environmental	Open in IMG/M
3300001851	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM31, ROCA_DNA206_0.2um_MCP-S_C_3b	Environmental	Open in IMG/M
3300002091	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-F8 metagenome	Environmental	Open in IMG/M
3300002092	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-B2 co-culture F-B6 metagenome	Environmental	Open in IMG/M
3300002301	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI co-culture FSW-F8	Environmental	Open in IMG/M
3300002933	Combined Assembly of freshwater hypolimnion microbial communities from Trout Bog Lake, Wisconsin, USA	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08	Environmental	Open in IMG/M
3300003816	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jul07	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300003943	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Aug07	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004684	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (version 2)	Environmental	Open in IMG/M
3300004686	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (version 2)	Environmental	Open in IMG/M
3300004688	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE06Aug07 (version 2)	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300004805	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA6M	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006108	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH20Aug07	Environmental	Open in IMG/M
3300006113	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH08Aug08	Environmental	Open in IMG/M
3300006120	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08	Environmental	Open in IMG/M
3300006127	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09	Environmental	Open in IMG/M
3300006128	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020724	Freshwater microbial communities from Trout Bog Lake, WI - 04OCT2008 hypolimnion	Environmental	Open in IMG/M
3300021122	Freshwater microbial communities from Trout Bog Lake, WI - 19AUG2008 epilimnion	Environmental	Open in IMG/M
3300021125	Freshwater microbial communities from Trout Bog Lake, WI - 11AUG2009 epilimnion	Environmental	Open in IMG/M
3300021127	Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 epilimnion	Environmental	Open in IMG/M
3300021128	Freshwater microbial communities from Trout Bog Lake, WI - 20AUG2007 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300022602	Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnion	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025365	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH26May08 (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025389	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025392	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025410	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025413	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025417	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025418	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025429	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025466	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07 (SPAdes)	Environmental	Open in IMG/M
3300025598	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300031884	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18005	Environmental	Open in IMG/M
3300032117	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003	Environmental	Open in IMG/M
3300032560	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18009	Environmental	Open in IMG/M
3300032561	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18011	Environmental	Open in IMG/M
3300032605	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18025_13	Environmental	Open in IMG/M
3300032676	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18023	Environmental	Open in IMG/M
3300032677	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18019	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0063832	3300000176	Freshwater	MNWVKYWFAVFLVEIAIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVIVRTKKDIVRG*
TBL_comb48_EPIDRAFT_10108756	3300000439	Freshwater	MSWVKYWFAVFLIELAIWSYIIYLHFEIKRLEKPKAKFLKEHKVIVKTKKDIVRG*
TBL_comb48_EPIDRAFT_10694234	3300000439	Freshwater	MSWVKYWFAVFIIELYIWSYVIYLHFHIKSLEKPKAKFLKEHKVIVRTKKDIVRG*
TBL_comb47_HYPODRAFT_100385092	3300000553	Freshwater	MSWVKYWFAVFLIELAIWSYVIYLHFEIKELEKIQVPKPKFDKEHKVLVRTKKDIVRG*
RCM30_10540313	3300001842	Marine Plankton	MNAVRYWFCIFVIEVFIWSYVIYLHFEIKELEKIKVPKPKFDKEHKVIVKTKKDIVRG*
RCM30_10679082	3300001842	Marine Plankton	MSWVKYWFCIFVXXXXXXXXIYLHFTIKELEKIRVPKPKFNKEHKVIVRTKKDIVRG*
RCM37_10176347	3300001850	Marine Plankton	MNAVRYWFCIFVIEVFIWSYVIYLHFEIKELEKIKVPKPKFLKEHKVIVRTKKDIVRG*
RCM31_101894512	3300001851	Marine Plankton	MNAVRYWFCIFVIEVFIWSYVIYLHFEIKELEKIKVPKPKFDKEHKVIVRTKKDIVRG*
JGI24028J26656_10040051	3300002091	Lentic	SCMTWETYWFIVYLIELGLWSYIIYLHFEIKMLRKPKAHFSKEHKVIVKTKKDIVRG*
JGI24028J26656_10072765	3300002091	Lentic	MTWETYWFIVYLIELGLWSYIIYLHFEIKMLQKPKAKFYKQTKVVVRTKKDIVRG*
JGI24028J26656_10107154	3300002091	Lentic	YWFAVFIIELFIWSYVIYLHFEIKRLESIKAPKYQKEHKVIVKTKKDIMRG*
JGI24218J26658_100012940	3300002092	Lentic	MNWVKYWFAVFIIELFIWSYVIYLHFEIKRLESIKAPKYQKEHKVIVKTKKDIMRG*
JGI24218J26658_10027607	3300002092	Lentic	MTWETYWFIVYLIELGLWSYIIYLHFEIKMLRKPKARFSKEHKVIVKTKKDIVRG*
JGI24218J26658_10166354	3300002092	Lentic	MTWVKYWFAVFIVELFLWAYIIYLHFEIKELQKMRIPKPRYQKEHKVIVKTKKDIVRG*
JGI24891J29808_10118302	3300002301	Lentic	MTWETYWFIVYLIELGLWSYIIYLHFEIKMLRKPKAHFSKEHKVIVKTKKDIVRG*
G310J44882_100375192	3300002933	Freshwater	MNWVKYWFAVFLIELAIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVIVRTKKDIVRG*
JGI26470J50227_10006306	3300003375	Freshwater	MTWIKYWFAVFLIELFLWAYIIYLHFEIKELEKMRKPKFSKQQKVIIRTKKDIVRG*
JGI26470J50227_10131853	3300003375	Freshwater	MSWVKYWFAVFLVELVIWSYVIYLHFEIKELEKIRVPRPKFDKGHKVLVRTKKDIVRG*
JGI26470J50227_10557992	3300003375	Freshwater	MSWVKYWFAVFLVELVIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVIVRTKKDIVRG*
JGI26470J50227_10609852	3300003375	Freshwater	MSWVKYWFAVFLIELAIWSYVIYLHFKIKELEKIKLPKPKFDKEHKVIVKTKKDIVRG*
JGI26470J50227_10637082	3300003375	Freshwater	MTWITYWFIVFLIELGLWSYIIYLHFEIKMLRKPKAHFSKEHKVIVKTKKDIVRG*
JGI26470J50227_10644781	3300003375	Freshwater	MXWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIQVPKPKFDKEHKVLVRTKKDIVRG*
Ga0007811_10038312	3300003787	Freshwater	MSWVKYWFAVFLVELVIWSYVIYLHFEIKELEKTRLPKPKFDKEHKVIVRTKKDIVRG*
Ga0007835_10034585	3300003789	Freshwater	CMSWVKYWFAVFLVELVIWSYVIYLHFEIKELEKIKLPKPKFDKEHKVIVKTKKDIVRG*
Ga0007835_10051771	3300003789	Freshwater	MSWVKYWFVVFLFELAIWSYVIYLHFEIKELEKVKLPKPKFDKEHKVIVRTKKDIVRG*
Ga0007835_10123413	3300003789	Freshwater	MSWVKYWFAVFLIEIVIWSYVIYLHFEIKELEKIMVPKPRFDKEHKVVVKTKKDIVRG*
Ga0007845_1001811	3300003816	Freshwater	MSWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIQVPKPKFDKEHKVLVRTKKDIVRG*
Ga0031655_100263781	3300003852	Freshwater Lake Sediment	MIWVVYWFIVFLIEVGIWSYVIYLHFTIKELERPKVKFPKEHKVVVRTKRDIVRG*
Ga0031655_100554713	3300003852	Freshwater Lake Sediment	MSWVKYWFAVFLVELVIWSYVIYLHFEIKELEKIKLPKPKFDKEHKVIVKTKKDIVRG*
Ga0031655_100730562	3300003852	Freshwater Lake Sediment	MTWVKYWFAVFIIELFLWAYIIYLHFEIKELEKQRLKPKVKYPIETKVIIRTKKDIVRG*
Ga0031655_100790684	3300003852	Freshwater Lake Sediment	MTWVKYWFAVFIVELFLWAYIVYLHFEIKELEKQRLKPKVKYPIETKVIIRTKKDIVRG*
Ga0031655_100809162	3300003852	Freshwater Lake Sediment	MSWVKYWFVIFLVELFLWAYIIYLHFEIKELERMRKPKFTKQHKVIIRTKKDIVRG*
Ga0031655_100884891	3300003852	Freshwater Lake Sediment	MTWIKYWFAVFLIELFLWAYIIYLHFEIKELEKMRKPKFSKQQKVIVRTKKDIVRG*
Ga0031655_102170192	3300003852	Freshwater Lake Sediment	MSWVKYWLAVFLIELAIWSYVIYLHFEIKELEKIKVAKPKFDKNHKVIVRTKKDIVRG*
Ga0031655_102550111	3300003852	Freshwater Lake Sediment	MTWIKYWFAVFLIELFLWAYIIYLHFEIKELEKMRKPKFSKQQKVIVRTKKDIVR
Ga0031655_103356142	3300003852	Freshwater Lake Sediment	MTWVKYWFAVFIVELFLWAYIIYLHFEIKQLEKQRQIKYPKQTKVVIRTKKDIVRG*
Ga0007808_10004371	3300003943	Freshwater	MSWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIQVPKPKFDKEHKVLVR
Ga0065861_10356594	3300004448	Marine	MNWIKIWFATFIVELFIWAYVIYLHFEIKELEKIRVPKPKYQRQIIIKTKKDIVRG*
Ga0065168_10014583	3300004684	Freshwater	MIVATYWFVVFLIELAIWSYVIYLHFEIKELEKIKIPRPSFAKEHKVVVRTKKDIVRG*
Ga0065168_10550582	3300004684	Freshwater	MSWVKYWFAVFLIELAIWSYVIYLHFEIKELEKIRVPKPKFDKEHKVLVRTKKDIVRG*
Ga0065173_10247061	3300004686	Freshwater	YWFAVFIIEVVIWSYVIYLHFHIKSLEKPKAKFLKEHKVIVRTKKDIVRG*
Ga0065169_10005623	3300004688	Freshwater	MSWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIQVPKPKFDKEHKVLVRTKK
Ga0007794_100758911	3300004774	Freshwater	MSWVKYWFVVFLFELAIWSYVIYLHFEIKELEKVKLPKPKFDKEHKVIVRTKK
Ga0007792_100786622	3300004805	Freshwater	VSWVKYWFVVFLFELAIWSYVIYLHFEIKELEKVKLPKPKFDKEHKVIVRTKKDIVRG*
Ga0007854_1000157012	3300004806	Freshwater	MSWVKYWFAVFIIEVVIWSYVIYLHFHIKSLEKPKAKFLKEHKVIVRTKKDIVRG*
Ga0007809_100031749	3300004807	Freshwater	MSWVKYWFAVFLIEIAIWSYVIYLHFEIKELERVKLPKPKFDKEHKVVVRTKKDIVRG*
Ga0007809_100139564	3300004807	Freshwater	MMLATYWFVVFLIELTIWSYVIYLHFEIKELEKIKIPRPSFAKEHKVVVRTKKDIVRG*
Ga0007809_101304151	3300004807	Freshwater	FAVFLVELAIWSYVIYLHFEIKELEKIQVPKPKFDKEHKVLVRTKKDIVRG*
Ga0007809_101397052	3300004807	Freshwater	MSWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVIVRTKKDIVRG*
Ga0007876_10008838	3300006071	Freshwater	MSWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIRVPKPKFDKEHKVLVRTKKDIVRG*
Ga0007881_10305271	3300006072	Freshwater	MSWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIRLPKPKFDKDHKVIVRTKKDIVRG*
Ga0007862_10223601	3300006108	Freshwater	MSWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIRTPRPKFDKEHKVLVRTKKDIVRG*
Ga0007858_10090594	3300006113	Freshwater	SWVKYWFVVFLFELAIWSYVIYLHFEIKELEKVKLPKPKFDKEHKVIVRTKKDIVRG*
Ga0007858_10628091	3300006113	Freshwater	WFAVFLIEIVIWSYVIYLHFEIKELEKIMVPKPRFDKEHKVVVKTKKDIVRG*
Ga0007867_11395521	3300006120	Freshwater	MSWVKYWFAVFIIELYIWSYVIYLHFEIKELERSKLPKPKFDKEHKVIVRTKKDIVRG*
Ga0007805_10029317	3300006127	Freshwater	SWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIRVPKPKFDKEHKVLVRTKKDIVRG*
Ga0007805_10080293	3300006127	Freshwater	MSWVKYWFAVFLIELAIWSYVIYLHFEIKELEKIRTPRPKFDKEHKVLVRTKKDIVRG*
Ga0007828_10039824	3300006128	Freshwater	MSWVKYWFAVFLIELAIWSYVIYLHFEIKELDKMRTPRPKFDKEHKVLVRTKKDIVRG*
Ga0007828_10183815	3300006128	Freshwater	MSWVKYWFAVFLVELVIWSYVIYLHFEIKELEKIRVPRPKFDKGHKVL
Ga0114978_101014004	3300009159	Freshwater Lake	MNWIKYWFAVFIIELFIWAYVIILHFEIKELQKIRAPKPRYQKEHKVIVKTKKDIMRG*
Ga0164296_10176457	3300013093	Freshwater	MTWVKYWFAVFIVELFLWAYIIYLHFEIKELEKQRLKPKVKYPIETKVIIRTKKDIVRG*
Ga0164296_12756471	3300013093	Freshwater	MTWVKYWFAVFLVELVIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVIVRTKKDIVRG*
Ga0164296_13942852	3300013093	Freshwater	MTWITIWFIVYLFEIFMWAYIVYLHFEIKELEKQRLKPKVKYPIETKVIIR
Ga0214198_10057541	3300020710	Freshwater	MSWVKYWFAVFLIELAIWSYIIYLHFEIKRLEKPKAKFLKEHKVIVKTKKDIVRG
Ga0214198_10194162	3300020710	Freshwater	MSWVKYWFAVFLIELAIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVLVRTKKDIVRG
Ga0214244_10389573	3300020724	Freshwater	MNWVKYWFAVFLIELAIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVIVRTKKDIV
Ga0214244_10483892	3300020724	Freshwater	KYWFAVFLIELAIWSYVIYLHFEIKELEKIQVPKPKFDKEHKVLVRTKKDIVRG
Ga0214195_10340122	3300021122	Freshwater	AVFLIELAIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVIVRTKKDIVRG
Ga0214211_10120662	3300021125	Freshwater	MNWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVIVRTKKDIVRG
Ga0214193_10334971	3300021127	Freshwater	MNWVKYWFAVFLIELAIWSYVIYLHFQIKELEKIRLPKPKFDKEHKVIVRTKKDIVRG
Ga0214176_10138211	3300021128	Freshwater	MSWVKYWFAVFIIELYIWSYVIYLHFHIKSLEKPKAKFLKEHKVIVRTKKDIMRG
Ga0214206_10008722	3300021131	Freshwater	MTWIKYWFAVFIIELFLWAYIIYLHFEIKQLEKQRQVKYPKQTKVVIRTKKDIVRG
Ga0214206_10016779	3300021131	Freshwater	MNWVKYWLAVFLIELAIWSYVIYLHFEIKELEKIKVAKPKFDKDHKVIVRTKKDIVRG
Ga0214206_10057613	3300021131	Freshwater	MSWVKYWFAVFIIELYIWSYVIYLHFHIKSLEKPKAKFLKEHKVIVRTKKDIVRG
Ga0214206_10104412	3300021131	Freshwater	MSWVKYWFAVFIIEVVIWSYVIYLHFHIKSLEKPKAKFLKEHKVIVRTKKDIVRG
Ga0214206_10231461	3300021131	Freshwater	MSWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIQVPKPKFDKEHKVLVRTKKDIVRG
Ga0214192_10892633	3300021142	Freshwater	WVVYWFLVFVIEVGIWSYVIYLHFTIKELERPKVKFPKEHKVVVRTKRDIVRG
Ga0214192_11780112	3300021142	Freshwater	MIWVVYWFIVFLIEVGIWSYVIYLHFTIKELERPKVKFPKEHKVVVRTKRDIVR
Ga0248169_10232826	3300022602	Freshwater	MSWVKYWFAVFLVELVIWSYVIYLHFEIKELEKIRVPRPKFDKGHKVLVRTKKDIVRG
Ga0248169_1067122	3300022602	Freshwater	MTWITIWFIVYLFEIFMWAYIVYLHFEIKELEKQRLKPKVKYPIETKVIIRTKKDIVRG
Ga0248169_1081479	3300022602	Freshwater	MSWVKYWFAVFLVELVIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVIVRTKKDIVRG
Ga0208504_10088671	3300025358	Freshwater	MSWVKYWFVVFLFELAIWSYVIYLHFEIKELEKVKLPKPKFDKEHKVIVRTKKDIVRG
Ga0208504_10268031	3300025358	Freshwater	MSWVKYWFAVFLVELVIWSYVIYLHFEIKELEKIKLPKPKFDKEHKVIVKTKKDIVRG
Ga0208621_10091594	3300025365	Freshwater	MSWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVIVRTKKDIVRG
Ga0208382_10010163	3300025369	Freshwater	MSWVKYWFAVFLIEIVIWSYVIYLHFEIKELEKIMVPKPRFDKEHKVVVKTKKDIVRG
Ga0208738_100001753	3300025379	Freshwater	MSWVKYWFAVFLVELVIWSYVIYLHFEIKELEKTRLPKPKFDKEHKVIVRTKKDIVRG
Ga0208250_10016865	3300025383	Freshwater	MSWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIRVPKPKFDKEHKVLVRTKKDIVRG
Ga0208250_10242501	3300025383	Freshwater	MSWVKYWFAVFLIELAIWSYVIYLHFEIKELEKIRTPRPKFDKEHKVLVRTKKDIVRG
Ga0208257_10244842	3300025389	Freshwater	MSWVKYWFAVFLIEIAIWSYVIYLHFEIKELERVKLPKPKFDKEHKVVVRTKKDIVRG
Ga0208380_10589712	3300025392	Freshwater	MIVATYWFVVFLIELAIWSYVIYLHFEIKELEKIKIPRPSFAKEHKVVVRTKKDIVRG
Ga0208875_10529732	3300025410	Freshwater	MSWVKYWFAVFIIELYIWSYVIYLHFEIKELERSKLPKPKFDKEHKVIVRTKKDIVRG
Ga0208614_10423322	3300025413	Freshwater	VKYWFVVFLFELAIWSYVIYLHFEIKELEKVKLPKPKFDKEHKVIVRTKKDIVRG
Ga0208614_10553212	3300025413	Freshwater	MSWVKYWFVVFLFELAIWSYVIYLHFEIKELEKVKLPKPKFDKEHKV
Ga0208616_10641972	3300025417	Freshwater	MSWVKYWFAVFLIELAIWSYVIYLHFEIKELDKMRTPRPKFDKEHKVLVRTKKDIVRG
Ga0208253_10304713	3300025418	Freshwater	YWFAVFIIEVVIWSYVIYLHFHIKSLEKPKAKFLKEHKVIVRTKKDIVRG
Ga0208500_10038737	3300025429	Freshwater	MNWVKYWFAVFLIELAIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVIVRTKKDIVRG
Ga0208500_10161421	3300025429	Freshwater	CMSWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIRTPRPKFDKEHKVLVRTKKDIVRG
Ga0208497_10020001	3300025466	Freshwater	SCMSWVKYWFAVFLVELVIWSYVIYLHFEIKELEKIKLPKPKFDKEHKVIVKTKKDIVRG
Ga0208379_10253193	3300025598	Freshwater	MMLATYWFVVFLIELTIWSYVIYLHFEIKELEKIKIPRPSFAKEHKVVVRTKKDIVRG
Ga0208379_10688572	3300025598	Freshwater	MNWVKYWFAVFLVEIAIWSYVIYLHFKIKELENIQLPKPKFDKEHKVIVRTKKDIVRG
Ga0209777_100709787	3300027896	Freshwater Lake Sediment	MTWITYWFIVFLIELGLWSYIIYLHFEIKMLRKPKAHFSKEHKVIVKTKKDIVRG
Ga0209777_100787552	3300027896	Freshwater Lake Sediment	MTWVKYWFAVFIIELFLWAYIIYLHFEIKELEKQRLKPKVKYPIETKVIIRTKKDIVRG
Ga0209777_102311022	3300027896	Freshwater Lake Sediment	MTWVKYWFAVFIVELFLWAYIVYLHFEIKELEKQRLKPKVKYPIETKVIIRTKKDIVRG
Ga0209777_102323941	3300027896	Freshwater Lake Sediment	MTWVKYWFAVFIVELFLWAYIIYLHFEIKELEKQRLKPKVKYPIETKVII
Ga0209777_102516733	3300027896	Freshwater Lake Sediment	MSWVKYWFAVFLIELAIWSYVIYLHFEIKELEKIQVPKPKFDKEHKVLVRTKKDIVRG
Ga0209777_102664351	3300027896	Freshwater Lake Sediment	MTWIKYWFAVFLIELFLWAYIIYLHFEIKELEKMRKPKFSKQQKVIVRTKKDIVRG
Ga0209777_105087942	3300027896	Freshwater Lake Sediment	MSWVKYWFAVFLVELAIWSYVIYLHFEIKELEKIRTPRPKFDKGHKVLVRTKKDIVRG
Ga0209777_105470413	3300027896	Freshwater Lake Sediment	MSWVKYWFAVFLIEIAIWSYVIYLHFKIKELENIRLPKPKFDKEHKVLVRTKKDIVRG
Ga0209777_105752812	3300027896	Freshwater Lake Sediment	MTWVKYWFAVFIVELFLWAYIIYLHFEIKQLEKQRQIKYPKQTKVVIRTKKDIVRG
Ga0209777_106138121	3300027896	Freshwater Lake Sediment	MTWIKYWFAVFLIELFLWAYIIYLHFEIKELEKMRKPKFSKQQKVIIRTKKDIVRG
Ga0209777_107028181	3300027896	Freshwater Lake Sediment	MSWVKYWFAVFIIEIAIWSYVIYLHFKIKELENIRLSKPKFDKEHKVIVRTKKDIVRG
Ga0209777_107042381	3300027896	Freshwater Lake Sediment	MSWVKYWLAVFLIELAIWSYVIYLHFEIKELEKIKVAKPKFDKDHKVIVRTKKDIVRG
Ga0209777_110434791	3300027896	Freshwater Lake Sediment	MSWVKYWFAVFLIELAIWSYIIYLHFEIKRLEKPKAKFLKEHKVIVRTKKDIVRG
Ga0316219_10544371	3300031759	Freshwater	FIIELYIWSYVIYLHFHIKSLEKPKAKFLKEHKVVVRTKKDIVRG
Ga0316219_11137164	3300031759	Freshwater	WVKYWFAVFLVELAIWSYVIYLHFEIKELEKIRVPKPKFDKEHKVLVRTKKDIVRG
Ga0316219_11830233	3300031759	Freshwater	MSWVKYWFAVFIIELYIWSYVIYLHFHIKSLEKPKAKFLKEHKVVVRTKKD
Ga0316217_100444574	3300031813	Freshwater	MSWVKYWFAVFIIELYIWSYVIYLHFHIKSLEKPKAKFLKEHKVVVRTKKDIVRG
Ga0316220_10120607	3300031884	Freshwater	MIWVVYWFIVFLIEVGIWSYVIYLHFTIKELERPKVKFPKEHKVVVRTKRDIVRG
Ga0316218_10536123	3300032117	Freshwater	MTWVKYWFAVFIVELFLWAYIIYLHFEIKELEKQRLKPKVKYPIETKVIIRTKKDIVRG
Ga0316223_10656614	3300032560	Freshwater	FIVFLIEVGIWSYVIYLHFTIKELERPKVKFPKEHKVVVRTKRDIVRG
Ga0316222_10473244	3300032561	Freshwater	MSWVKYWFAIFIIELYIWSYVIYLHFHIKSLEKPKAKFLKEHKVVVRTKKDIVRG
Ga0316222_10617221	3300032561	Freshwater	FIIELYIWSYVIYLHFHIKSLEKPKAKFLKEHKVIVRTKKDIMRG
Ga0316232_11836801	3300032605	Freshwater	MTWITIWFIVYLFEIFMWAYIVYLHFEIKELEKQRLKPKVKYPIETKVIIRTKKDI
Ga0316229_12930471	3300032676	Freshwater	SWVKYWFAVFLVELVIWSYVIYLHFEIKELEKIRLPKPKFDKEHKVIVRTKKDIVRG
Ga0316227_10183507	3300032677	Freshwater	MIWVVYWFLVFLIEVGIWSYVIYLHFTIKELERPKVKFPKEHKVVVRTKRDIVRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F067351

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences