Metagenome / Metatranscriptome Family F067572

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067572
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	86 residues
Representative Sequence	MRINNRLSGFSSRQTIEQFHQARLVRITHGRFAIWLDPFGVLNPKVVVNLLPELCVSVDLMMQGRWLGERFMFGAGWFV
Number of Associated Samples	113
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.48 %
% of genes near scaffold ends (potentially truncated)	41.60 %
% of genes from short scaffolds (< 2000 bps)	76.80 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.200 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (20.000 % of family members)
Environment Ontology (ENVO)	Unclassified (29.600 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.600 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.69% β-sheet: 25.23% Coil/Unstructured: 56.07%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF01936	NYN	5.60
PF08734	GYD	5.60
PF04228	Zn_peptidase	4.80
PF00697	PRAI	4.00
PF05960	DUF885	4.00
PF02661	Fic	3.20
PF01914	MarC	3.20
PF00583	Acetyltransf_1	2.40
PF11272	DUF3072	1.60
PF01650	Peptidase_C13	1.60
PF12867	DinB_2	1.60
PF14237	GYF_2	0.80
PF13247	Fer4_11	0.80
PF11821	ActD	0.80
PF00115	COX1	0.80
PF05988	DUF899	0.80
PF14534	DUF4440	0.80
PF12762	DDE_Tnp_IS1595	0.80
PF13924	Lipocalin_5	0.80
PF02882	THF_DHG_CYH_C	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1432	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	General function prediction only [R]	5.60
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	5.60
COG2321	Predicted metalloprotease	General function prediction only [R]	4.80
COG0135	Phosphoribosylanthranilate isomerase	Amino acid transport and metabolism [E]	4.00
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	4.00
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	3.20
COG5206	Glycosylphosphatidylinositol transamidase (GPIT), subunit GPI8	Posttranslational modification, protein turnover, chaperones [O]	1.60
COG0190	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	Coenzyme transport and metabolism [H]	0.80
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	0.80
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	77.60 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.40 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	77.60 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.40 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	60.00 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.40 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.40 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.80 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.00 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.80 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.80 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.00 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.60 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.80 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.00 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.60 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.80 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.00 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.60 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.80 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	60.00 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1.60 %
Streptomyces sp. GXT6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. GXT6	0.80 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_17202233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1238	Open in IMG/M
2162886007\|SwRhRL2b_contig_2160932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	977	Open in IMG/M
2162886007\|SwRhRL2b_contig_2298856	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1426	Open in IMG/M
3300000596\|KanNP_Total_noBrdU_T14TCDRAFT_1009452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1079	Open in IMG/M
3300000953\|JGI11615J12901_11000074	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	750	Open in IMG/M
3300002899\|JGIcombinedJ43975_10005671	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2031	Open in IMG/M
3300004114\|Ga0062593_101648813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	698	Open in IMG/M
3300005166\|Ga0066674_10078425	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300005172\|Ga0066683_10103659	All Organisms → cellular organisms → Bacteria	1727	Open in IMG/M
3300005179\|Ga0066684_10212376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1256	Open in IMG/M
3300005289\|Ga0065704_10157870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1377	Open in IMG/M
3300005332\|Ga0066388_101348003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1234	Open in IMG/M
3300005338\|Ga0068868_102142340	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300005354\|Ga0070675_100435530	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1174	Open in IMG/M
3300005365\|Ga0070688_100636809	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300005439\|Ga0070711_100252337	All Organisms → cellular organisms → Bacteria	1384	Open in IMG/M
3300005446\|Ga0066686_10827522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	614	Open in IMG/M
3300005446\|Ga0066686_11020855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. GXT6	536	Open in IMG/M
3300005450\|Ga0066682_10088045	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1937	Open in IMG/M
3300005467\|Ga0070706_100752548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300005540\|Ga0066697_10168545	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1297	Open in IMG/M
3300005558\|Ga0066698_10000481	All Organisms → cellular organisms → Bacteria	14869	Open in IMG/M
3300005558\|Ga0066698_10317874	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1078	Open in IMG/M
3300005564\|Ga0070664_100292451	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1471	Open in IMG/M
3300005576\|Ga0066708_10054705	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2246	Open in IMG/M
3300005577\|Ga0068857_101830666	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300005587\|Ga0066654_10773239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300005764\|Ga0066903_102709995	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	961	Open in IMG/M
3300006796\|Ga0066665_10097630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2147	Open in IMG/M
3300006796\|Ga0066665_11196386	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	580	Open in IMG/M
3300006797\|Ga0066659_11160642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	646	Open in IMG/M
3300006844\|Ga0075428_101134720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	825	Open in IMG/M
3300006854\|Ga0075425_102629894	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	556	Open in IMG/M
3300006904\|Ga0075424_100204658	All Organisms → cellular organisms → Bacteria	2097	Open in IMG/M
3300009098\|Ga0105245_10913497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	920	Open in IMG/M
3300009147\|Ga0114129_10793544	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1209	Open in IMG/M
3300009156\|Ga0111538_12423180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	658	Open in IMG/M
3300009162\|Ga0075423_11009099	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	884	Open in IMG/M
3300009162\|Ga0075423_11873160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	648	Open in IMG/M
3300010154\|Ga0127503_11267085	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300010303\|Ga0134082_10154677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	928	Open in IMG/M
3300010303\|Ga0134082_10261627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300010321\|Ga0134067_10166175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	795	Open in IMG/M
3300010325\|Ga0134064_10382981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	557	Open in IMG/M
3300010326\|Ga0134065_10102305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	953	Open in IMG/M
3300010337\|Ga0134062_10155403	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1020	Open in IMG/M
3300010359\|Ga0126376_12693019	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300010362\|Ga0126377_12804270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	562	Open in IMG/M
3300010366\|Ga0126379_11776838	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300010398\|Ga0126383_10406417	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1400	Open in IMG/M
3300012201\|Ga0137365_10000096	All Organisms → cellular organisms → Bacteria	43437	Open in IMG/M
3300012202\|Ga0137363_10146899	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1848	Open in IMG/M
3300012204\|Ga0137374_10065308	All Organisms → cellular organisms → Bacteria → Proteobacteria	3623	Open in IMG/M
3300012206\|Ga0137380_10002372	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	15960	Open in IMG/M
3300012206\|Ga0137380_10247681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1607	Open in IMG/M
3300012208\|Ga0137376_10196266	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300012210\|Ga0137378_10003343	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	13887	Open in IMG/M
3300012210\|Ga0137378_10684961	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	936	Open in IMG/M
3300012210\|Ga0137378_11261994	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300012211\|Ga0137377_10606900	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	1031	Open in IMG/M
3300012351\|Ga0137386_11146172	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300012354\|Ga0137366_10477119	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	902	Open in IMG/M
3300012357\|Ga0137384_10003031	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	13334	Open in IMG/M
3300012357\|Ga0137384_10438028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1077	Open in IMG/M
3300012925\|Ga0137419_10487741	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	976	Open in IMG/M
3300012929\|Ga0137404_10092212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2427	Open in IMG/M
3300012957\|Ga0164303_10037203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2056	Open in IMG/M
3300012971\|Ga0126369_11816800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300012977\|Ga0134087_10570804	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300013306\|Ga0163162_12989410	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300014157\|Ga0134078_10052912	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1411	Open in IMG/M
3300014166\|Ga0134079_10027528	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1878	Open in IMG/M
3300015371\|Ga0132258_11960004	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300016270\|Ga0182036_10036039	All Organisms → cellular organisms → Bacteria	2995	Open in IMG/M
3300016319\|Ga0182033_10092447	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2202	Open in IMG/M
3300016357\|Ga0182032_10049812	All Organisms → cellular organisms → Bacteria	2709	Open in IMG/M
3300017659\|Ga0134083_10503622	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	542	Open in IMG/M
3300018071\|Ga0184618_10219760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	798	Open in IMG/M
3300018433\|Ga0066667_10011777	All Organisms → cellular organisms → Bacteria	4255	Open in IMG/M
3300018433\|Ga0066667_10433318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1070	Open in IMG/M
3300019885\|Ga0193747_1001245	All Organisms → cellular organisms → Bacteria	7100	Open in IMG/M
3300019887\|Ga0193729_1008015	All Organisms → cellular organisms → Bacteria	4887	Open in IMG/M
3300020006\|Ga0193735_1030467	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1650	Open in IMG/M
3300020006\|Ga0193735_1157886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	581	Open in IMG/M
3300022756\|Ga0222622_10036533	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2667	Open in IMG/M
3300023058\|Ga0193714_1001168	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4369	Open in IMG/M
3300025905\|Ga0207685_10464164	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300025910\|Ga0207684_10531964	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1006	Open in IMG/M
3300025915\|Ga0207693_11108420	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300025919\|Ga0207657_10522612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	929	Open in IMG/M
3300025930\|Ga0207701_10005562	All Organisms → cellular organisms → Bacteria	12663	Open in IMG/M
3300025939\|Ga0207665_10057538	All Organisms → cellular organisms → Bacteria	2626	Open in IMG/M
3300025945\|Ga0207679_10203192	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1656	Open in IMG/M
3300026116\|Ga0207674_11005840	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300026306\|Ga0209468_1097763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	950	Open in IMG/M
3300026323\|Ga0209472_1206054	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	661	Open in IMG/M
3300026324\|Ga0209470_1050861	All Organisms → cellular organisms → Bacteria	1999	Open in IMG/M
3300026327\|Ga0209266_1056538	All Organisms → cellular organisms → Bacteria	1898	Open in IMG/M
3300026331\|Ga0209267_1024674	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2957	Open in IMG/M
3300026343\|Ga0209159_1280649	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300026494\|Ga0257159_1060937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	645	Open in IMG/M
3300026530\|Ga0209807_1055100	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1820	Open in IMG/M
3300026538\|Ga0209056_10031440	All Organisms → cellular organisms → Bacteria	4998	Open in IMG/M
3300026540\|Ga0209376_1151653	All Organisms → cellular organisms → Bacteria	1110	Open in IMG/M
3300026709\|Ga0207512_101127	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	680	Open in IMG/M
3300028597\|Ga0247820_10745928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	685	Open in IMG/M
3300028803\|Ga0307281_10265750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	633	Open in IMG/M
3300028828\|Ga0307312_10733400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	655	Open in IMG/M
3300028889\|Ga0247827_10875988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	601	Open in IMG/M
3300030844\|Ga0075377_11690740	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	650	Open in IMG/M
3300030945\|Ga0075373_11652503	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1080	Open in IMG/M
3300031538\|Ga0310888_10515837	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	717	Open in IMG/M
3300031716\|Ga0310813_10117523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2094	Open in IMG/M
3300031720\|Ga0307469_12157028	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	542	Open in IMG/M
3300031744\|Ga0306918_10100524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2058	Open in IMG/M
3300031833\|Ga0310917_10317166	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1056	Open in IMG/M
3300031879\|Ga0306919_10535829	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	903	Open in IMG/M
3300031890\|Ga0306925_10081831	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3415	Open in IMG/M
3300031944\|Ga0310884_10758347	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	591	Open in IMG/M
3300032001\|Ga0306922_10200310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2143	Open in IMG/M
3300032205\|Ga0307472_101304628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	699	Open in IMG/M
3300033412\|Ga0310810_10382034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1464	Open in IMG/M
3300033475\|Ga0310811_11305803	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300033551\|Ga0247830_11489978	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.00%
Host-Associated	Host-Associated	16.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.60%
Plants	Host-Associated → Plants	16.00%
Aquatic	Environmental → Aquatic	2.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.40%
Sediment	Environmental → Aquatic → Sediment	1.60%
Freshwater	Environmental → Aquatic → Freshwater	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.60%
Loam	Environmental → Terrestrial → Soil → Loam	8.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.60%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	22.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.60%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300000596	Amended soil microbial communities from Kansas Great Prairies, USA - Total DNA no BrdU F1.4TC	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026494	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-A	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026709	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-SCHO22-E (SPAdes)	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030945	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_02439050	2088090014	Soil	MRINNRLGGFSSRQTIEQFHEARLVRITHGGFAIWLDPFGMLDPEVVVNLLPEFRVGVDLMRRGRWLVERFMGGAGPFV
SwRhRL2b_0917.00007050	2162886007	Switchgrass Rhizosphere	VCSLFEKPMRINNRLSGFSPRQTIEQFHQARLVRITHGRFAIWLDPFGVLNPKVVVNLLPKLHVSVDLMMQGRWPGERFMCAAGWFV
SwRhRL2b_0410.00003130	2162886007	Switchgrass Rhizosphere	LRASICSLFEKTMRINNRLGGFSSRQTIEQLHEARLVRITHGRFAIWLDPFGMLNPEVVVNLLPKLDVSVDLMRLGRWLGERFMGGAGPFV
KanNP_Total_noBrdU_T14TCDRAFT_10094523	3300000596	Soil	SLFEKTMRINNRLSGFSSRQAIEQFHQARLVRITHGRFAIWLDPFRVLNPKFVVNLLPELRVSVDLMMHGRWLGERFTCSAGWFV*
JGI11615J12901_110000742	3300000953	Soil	MRINNRLGGFSSRQTIEQFHEARLVRITHGGFAIWLDPFGMLDPEVVVNLLPEFRVGVDLMRRGRWLVERFMGGAGPFV*
JGIcombinedJ43975_100056712	3300002899	Soil	MRINNRLGGFSSLQTIEQFHEARLVRITHGGFAIWLDPFGMLDPEVVVNLLPELDVSVDFMRRGRWLIQRFMGDARRLI*
Ga0062593_1016488131	3300004114	Soil	LRGSVCSLFEKAMRIDNRLGGCSSRQTIEQFHKAPLVRITHGGFAIWLDPIGMLDPEVVVNLLPKLGVSVDLVR
Ga0066674_100784253	3300005166	Soil	VQAGYSCAESVCSLFEKTMRINNRLSGFSSPQTMEQFHQARLVRITHGRFAIWLDPFRVLNPKVVVNLLPELCVSVDLMMQGRWLGERFMCGAGRFV*
Ga0066683_101036593	3300005172	Soil	CSLFEKTMRINNRLSGFSSPQTMEQFHQARLVRITHGRFAIWLDPFRVLNPKVVVNLLPELCVSVDLMMQGRWLGERFMCGAGRFV*
Ga0066684_102123762	3300005179	Soil	MISGEIFRVQAGYSCAESVSSLFEKTMRINNRLSGFSSRQTIEQFPQARLVRITHRRFAIWLDPFRVLYPEIVVNLLPEFRVSMDLMMQGRWPGERFMRGAGWLVRLA*
Ga0065704_101578701	3300005289	Switchgrass Rhizosphere	MRINNRLSGFSSRQTIEQFHQARFVRITHGRFAIWLDPFRVLNPKVVVNLLPELCVSVDLMMQGRWLGERFMFGAGWFV*
Ga0066388_1013480031	3300005332	Tropical Forest Soil	MKTAVPDSVENSPPATATYSRAESVCSLLEETMRIKNRLSGFSSRETIEQFHQPRLVRITHRRFATWLDPFRMLNPKIVVNLLPELRVSVDLLMQGRWLGERFM
Ga0068868_1021423401	3300005338	Miscanthus Rhizosphere	LESVCSLFEKPMRINNRLSGFSPRQTIEQVHQAPLVRITHGRFAIWLDPFGVLDPKVVVNLLPELHVSVDFMRRGR*
Ga0070675_1004355301	3300005354	Miscanthus Rhizosphere	VRSMCSLFQKTVRINNRLSGFSSLQTIEQFHQARLVRITLGRFATWFYPIRVLNPKVVVNLLPELGVSVDLLVHGRWLGERFMFGAG*
Ga0070688_1006368091	3300005365	Switchgrass Rhizosphere	CSLFEKTMRINNRLGGFSSPQTIEQFHQARLVRITHGTFAIWLDPFGMLDPKVLVNLLPELGVGVYLVRHGNWLGERFKCGAAGRPALAQ*
Ga0070711_1002523373	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	CCRLESVCSLFEKPMRINNRLSGFSPRQTPRQTIEQFHQARLVRITHGRFAIWLDPFGVLDPKVVVNLLPELHVSVDFMRRGRWPNERFMSGAGWFV*
Ga0066686_108275222	3300005446	Soil	LSGFSSRQTIEQFRQARLVRITHGRFAIWFDPFRVLNPKVVVNLLLELSVGVDLVKHGNGLGKPVFV*
Ga0066686_110208551	3300005446	Soil	MRINYRMHGFASRQTIEHFHEARLIRIARGGFAIWLDPFGILDPEVVVDLLPELRVSADLKTHGRWLGERFMSGAGGFV*
Ga0066682_100880453	3300005450	Soil	MRINNSVSGFAWRQTIEQCHEARLIRIAHGRFAIWLDPFRMLNPKVVVDLLPELHVSVDLMMQRRWLGERFTCGAG*
Ga0070706_1007525481	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRINNTLSGFSSPQTIEQFHQAHLVRITHGRFAIRLDPFRVLNPKVVVNLLPELRVSVDLMMQGRWLGERFMCGTGRFA*
Ga0066697_101685451	3300005540	Soil	MRINNRLSGFSSRQTIEQFRQARLVRITHGRFAIWLDPFGVLNPKVVVNLLPKLHASVDLMMQRRWPGERFMCGAGWFV*
Ga0066698_100004813	3300005558	Soil	MRINNRPGRSSSRWTIEQFHETRLVRITHGGFAIWLDPFGMLDPEVVVNLSPELRVSVDLMRRGRWFGERFRRAAGRFI*
Ga0066698_103178741	3300005558	Soil	SRQTIEQFRQARLVRITHGRFAIWLDPFGVLNPKVVVNLLPKLHASVDLMMQRRWPGERFMCGAGWFV*
Ga0070664_1002924513	3300005564	Corn Rhizosphere	MRINNRLSGFSPRQTIEQVHQARLVRITHGRFAIWLDPFGVLDPKVVVNLLPELHVSVDFMRRGRWPDKRFTSG
Ga0066708_100547053	3300005576	Soil	MRINNTLSRFSSCQTIEQFHEARLIRIAHGRFAIWLDPVRVLNPEVVMNLLPELHVSVDLFMERRWLGERFMCGKGWFVQ
Ga0068857_1018306661	3300005577	Corn Rhizosphere	MRINNRLSGFSPRQTIEQVHQAPLVRITHGRFAIWLDPFGVLDPKVVVNLLPELHVSVDFMRRGRWPD
Ga0066654_107732391	3300005587	Soil	MRINNRLSGFSSRQTIEQFRQARLVRITHGRFAIWFDPFRVLNPKVVVNLLPKLHASVDLMMQRRWPGERFMCGAGWFV*
Ga0066903_1027099952	3300005764	Tropical Forest Soil	MCSLFQKTVRINNGLSGFSSLQTIEQFHQARLVRITLGRFATRLYPIRVLNPKVVVNLLPELGVSVDLLVHRRWLGERFMSGAE*
Ga0066665_100976301	3300006796	Soil	MRINNRLSGFSSRQTIEQFRQARLVRITHGRFAIWLDPFGVLNPKVVVNLLPKLHASVDLMMQRRWPGERFMCGAGSFV*
Ga0066665_111963862	3300006796	Soil	LMISGEIFRVQAGYSCAESVSSLFEKTMRINNRLSGFSSRQTIEQFPQARLVRITHRRFAIWLDPFRVLYPEIVVNLLPEFRVSMDLMMQGRWPGERFRRGAGWLVRLA*
Ga0066659_111606421	3300006797	Soil	MISGEIFRVQAGYSCAESVSSLFEKTMRINNRLSGFSSRQTIEQFPQARLVRITHRRFAIWLDPFRVLYPEIVVNLLPEFRVSMDLTMQGRWPGERFMRGAGWLVRLA*
Ga0075428_1011347202	3300006844	Populus Rhizosphere	MCSLFQKTVRINNRLSGFSSLQTIEQFHQARLVRITLGRFATWLYPIRVLNPKVVVNLLPELRVSMDLLVHGRWLGERFMFGAE*
Ga0075425_1026298942	3300006854	Populus Rhizosphere	TPKSFARHSLRRPSFRQAEQASYNCAESVCSLFEKTMRINNRLSGFSSGQTIEQFHQARLVGITHGRFAIWLDPFGVLNPEVVVNLLPKLCVTVDLMMQRRWLGERFMCGAGWFA*
Ga0075424_1002046583	3300006904	Populus Rhizosphere	MCSLFQKTVRINNRLSGFSSLQTIEQFHQARLVRITLGRFATWFYPIRVLNPKVVVNLLPELGVSVDLLVHGRWLGERFMFGAG*
Ga0105245_109134971	3300009098	Miscanthus Rhizosphere	MRINNRLSGFSPRQTIEQFHQARLVRITHGRFAIWLDPFGVLDPKVVVNLLPELHVSVDFMRRGR*
Ga0114129_107935441	3300009147	Populus Rhizosphere	MCSLFQKTVRINNRLSGFSSLQTIEQFHQARLVRITLGRFATWLYPIRVLNPKVVVNLLPELRVSVYLLMQGRWLGERFMCGAGWFT*
Ga0111538_124231801	3300009156	Populus Rhizosphere	KTVRINNRLSGFSSLQTIEQFHQARLVRITLGRFATWFYPIRVLNPKVVVNLLPELGVSVDLLVHGRWLGERFMFGAG*
Ga0075423_110090991	3300009162	Populus Rhizosphere	FEKTMRINNRLSGFSSRQTIEQFHQARLVRITHGRFATWLDPFRVLNSKVVVNLLAKLGVSVDLLMQRRWLGERFMCGAGWFA*
Ga0075423_118731601	3300009162	Populus Rhizosphere	LSGFSSPQTIEQFHQTRLVGITNGRFATWLDPVRVLNPKIVVNLLSELRVSVNFMRRGRWPDKRFMSGAGWFV*
Ga0127503_112670852	3300010154	Soil	MRINNRLRGFSSRQTIEQFHQPRLVRITHGRFAIRVDPFGVLNPKVVVNLLPKLHVSVDLMMQGRWRGERFMFGAGWFV*
Ga0134082_101546772	3300010303	Grasslands Soil	MISGEIFRVQAGYSCAESVSSLFEKTMRINNRLSGFSSRQTIEQFPQARLVRITHRRFAIWLDPFRVLYPEIVVNLLPEFRVSMDLTMQG
Ga0134082_102616271	3300010303	Grasslands Soil	MRINNTLSGFSSCQTIEQFHEARLIRIAHGRFAIWLDPVRVLNPEVVMNLLPELHVSVDLFMERRWLGERFMCG
Ga0134067_101661751	3300010321	Grasslands Soil	MISGEIFRVQAGYGCAESVSSLFEKTMRINNRLSGFSSRQTIEQFPQARLVRITHRRFAIWLDPFRVLYPEIVVNLLPEFRVSMDLMMQGRWPGERFMRGAGWLVRLA*
Ga0134064_103829812	3300010325	Grasslands Soil	MRINNRPGRSSSRWTIEQFHETRLVRITHGGFAIWLDPFGMLDPEVVVNLSPELRVSVDLMSRGRWFGERFR
Ga0134065_101023051	3300010326	Grasslands Soil	MISGEIFRVQAGYSCAESVSSLFEKTMRINNRLSGFSSPQTMEQFHQARLVRITHGRFAIWLDPFRVLNPKVVVNLLPELCVSVDLMMQGRWLGERFMCGAGRFV*
Ga0134062_101554031	3300010337	Grasslands Soil	SLFEKTMRINNRLSGFSSPQTMEQFHQARLVRITHGRFAIWLDPFRALNPKVVVNLLPELCVSVDLMMQGRWLGERFMCGAGRFV*
Ga0126376_126930191	3300010359	Tropical Forest Soil	PFIGRLRPPRRVNFVGELQSRQSICSLFEKTMRINDRLRGFSSRQTIEQFLQPPLVRITHGRFATGLDPFRVLNSKVVVNLLPELRVSVDLMMQGCWLGGRFMCGAGRFA*
Ga0126377_128042701	3300010362	Tropical Forest Soil	SSLQTIEQFHQACLVRITLGRFATWFYPIRVLNPKVVVNLLPELGVSVDLLVHGRWLGERFMFGAG*
Ga0126379_117768381	3300010366	Tropical Forest Soil	RSRRQRLQRDGSTVPKFFARQAGKLSGQPYDYVRSMCSLFPKTVRINNGLSGFSSLQTIEQFHQARLVRITLGRFATRLYPIRVLNPKVVVNLLPELGVSVDLLVHGRWLGERFMFGAG*
Ga0126383_104064172	3300010398	Tropical Forest Soil	MASRQATTAPSQFWSLFEKAMRINDRLRGFSSRQTIEQFHQARLVRITLGRFATWFYPIRVLNPKVVVNLLPELGVSVDLLVHGRWLGERFMFGAG*
Ga0137365_100000967	3300012201	Vadose Zone Soil	MRINSRLGGFSSPQTIEQFHEARLVRITHGRFAIWLDPFGMLDPEVVVNLLPELRVRVDVMRRGRWLVERFMGGAGRLI*
Ga0137363_101468991	3300012202	Vadose Zone Soil	MRINNRLSGFSPRQTIEQFHQARLVRITHGRFAIWRDPFGVLDPKVVVNLLPELHVSVDFMRRGLWPNERFMSGAGWFV*
Ga0137374_100653082	3300012204	Vadose Zone Soil	MFARHGGQAVQAGYDCAESVCSLFEKTMRINNRLSGFSSPQTIEQFHQARLVRITHGRFAIRLDPFRVLNPKFVVNLSPELRVSVDLMMQGRWLGERFMCGAGWLL*
Ga0137380_100023728	3300012206	Vadose Zone Soil	MRINNRPGGSSSRRTIEQFHETRLVRITHGGFAIWLDPFGMLDPEVVVNLSPELRVSVDLMRRGRWFGERFRRAAGRFI*
Ga0137380_102476811	3300012206	Vadose Zone Soil	MRIDNRLSGFSSRQTIEQFRQARLVRITHGRFAIWLDPFGVLNSKVVVNLLPKLHASVDLMMQRRWPGERFMGGAGWFV*
Ga0137376_101962661	3300012208	Vadose Zone Soil	MRINNRLSGFSSRQTIEQFRQARLVRITHGRFAIWLDPFGVLNPKVVVNLLPKLHASVDLMMQQRWPGERFMCGAGWFV*
Ga0137378_100033439	3300012210	Vadose Zone Soil	MRINNRPGGSSSRRTIEQFHETRLVRITHGGFAIWLDPFGMLDPEVVVNLSPKLRVSVDLMRRGRWFGERFRRAAGRFI*
Ga0137378_106849611	3300012210	Vadose Zone Soil	SGCSLFEKTMGIDNRLGGFSSLQSSEQVHEARLVRIAHGRFPIWLDPFGMLDPEVIVNLLPKLGVSVGLVRNARRVA*
Ga0137378_112619941	3300012210	Vadose Zone Soil	MRIDNRLSGFSSRQTIEQFRQARLVRITHGRFAIRLDPFGVLNPKVVVNLLPKLHASVDLMTQRRWPGERFMCGAGSFV*
Ga0137377_106069003	3300012211	Vadose Zone Soil	LRASICSLFEKTMRINSRLGGFSSPQTIEQFHQARLVRITHGRFAIWLDPIGMLDPEVVVNLLPELRVRVDVMRRGRWLVKR
Ga0137386_111461721	3300012351	Vadose Zone Soil	MRIDNRLSGFSSRQTIEQFRQARLVRITHGRFAIRLDPFGVLNPKVVVNLLPKLHASVDLMMQRRWPGERFMCGAGSFV*
Ga0137366_104771192	3300012354	Vadose Zone Soil	MFARHGGQAVQAGYDCAESVCSLFEKTMRINNRLSGFSSPQTIEQFHQARLVRITHGRFAIRLDPFRVLNPKFVVNLLPELRVSVDLMMQRRWLGERFMCGVGWFA*
Ga0137384_1000303112	3300012357	Vadose Zone Soil	AATESICSLFEKTMRINNRPGRSSSRWTIEQFHETRLVRITHGGFAIWLDPFGMLDPEVVVNLSPKLRVSVDLMRRGRWFGERFRRAAGRFI*
Ga0137384_104380281	3300012357	Vadose Zone Soil	LRASICSLFEKTMRINSRLGGFSSPQTIEQFHEARLVRITHGRFAIWLDPFGMLDPEVVVNLLPELRVRVDVMRRGRWLVERFMGGAGRLI*
Ga0137419_104877411	3300012925	Vadose Zone Soil	KTMRINNRLRGFSSPQTIEHFDEARLVRITHGGFAIWLEPLGMLDPKVVVNLLSKLDVSVDLVRHGDWLGERFRHRARRLI*
Ga0137404_100922124	3300012929	Vadose Zone Soil	MHGFASRQTIEHFHEARLIRIARGGFAIWLDPFGILDPEVVVDLLPELRVSADLKTHGRWLGERFMSGAGGFV*
Ga0164303_100372032	3300012957	Soil	MRINNRLSGFSPRQTIEQFHQARLVRITHGRFAIWRDPFGVLDPKVVVNLLPELHVSVDFMRRRLWPNERFMSGAGWFV*
Ga0126369_118168002	3300012971	Tropical Forest Soil	DSALILRPPRGLCKQAAYDGVRSMCSLFQKTVRINNGLSGFSSLQTIEQFHQARLVRITLGRFATRLYPIRVLNPKVVVNLLPELGVSVDLLVHRRWLGERFMSGAE*
Ga0134087_105708042	3300012977	Grasslands Soil	MRINNRLSGFSSRQTIEQFPQARLVRITHRRFAIWLDPFRVLYPEIVVNLLPEFRVSMDLTMQGRW
Ga0163162_129894101	3300013306	Switchgrass Rhizosphere	RRRRNNATLSQLLRSGGVESVCSLFEKTMRINNRLSGFSSPQTIEQFHQAGFVRVTHGRFATWLDPVRMLNSKIVVNLSPELRVSVDLMMQERWPGQRFMCGAGWFA*
Ga0134078_100529122	3300014157	Grasslands Soil	MRINNRLSGFSSPQTIEQFHQARLVRITHGRFAIWLDPFRVLNPKVVVNLLPELCVSVDLMMQGRWLGERFMCGAGRFV*
Ga0134079_100275284	3300014166	Grasslands Soil	VQVGYSCAESVCSLFEKTMRINNRLSGFSSPQTMEQFHQARLVRITHGRFAIWLDPFGVLNPKVVVNLLPKLHASVDLMMQRRWPGERFMCGAGRFV*
Ga0132258_119600042	3300015371	Arabidopsis Rhizosphere	MRINNRLRGFSSRQTIEQFHQPRLVRITHGRFAIWVDPFGVLNPKVVVNLLPKLHVSVDLMMQGRWRGERFMFGSEWFL*
Ga0182036_100360393	3300016270	Soil	MCSLFQKTVRINNRLSGFSSLETIEQFHQARLVRITLGRFATWFYPIRVLNPKVVVNLLPELGVSVDLLVHGRWLDGRFMFGAG
Ga0182033_100924472	3300016319	Soil	MCSLFQKTVRINNRLSGFSSLQTIEQFHQARLVRITLGRFATWFYPIRVLNPKVVVNLLPELGVSVDLLVHGRWLDGRFMFGAG
Ga0182032_100498123	3300016357	Soil	MCSLFQKTVRINNRLSGFSSLETIEQFHQARLVRITLGRFATWFYPVRVLNPKVVVNLLPELRVSVDLLVHGRWLGERFMFCAG
Ga0134083_105036221	3300017659	Grasslands Soil	MRINNRLSGFSSPQTMEQFHQARLVRITHGRFAIWLDPFRVLNPKVVVNLLLELSVGVDLVKHGNGLGKPVFV
Ga0184618_102197601	3300018071	Groundwater Sediment	MRINNRLSGFSPRYPIEQFNQARLVRITHGRFAIWLDPFGVLNPKVVVNLLPELHVSVDLMRRGRLPGDRFMGGAGWFV
Ga0066667_100117774	3300018433	Grasslands Soil	MRINNRLSGFSSRQTIEQFRQARLVRITHGRFAIWLDPFGVLNPKVVVNLLPKLHASVDLMMQRRWPGERFMCGAGWFV
Ga0066667_104333181	3300018433	Grasslands Soil	MISGEIFRVQAGYSCAESVSSLFEKTMRINNRLSGFSSRQTIEQFPQARLVRITHRRFAIWLDPFRVLYPEIVVNLLPEFRVSMDLMMQGRWPGERFMRGAGWLVRLA
Ga0193747_10012457	3300019885	Soil	VRSLFEKPMRINNRLSGFSPRQTIEQFHQARLVRITHGRFAIWRDPFGVLDPKVVVNLLPELHVSVDFMRRGLWPNERFMSGAGWFV
Ga0193729_10080156	3300019887	Soil	MRINNRLSGLSSPQTIEQFHQARLVRITHGGFAIWFDPFGVLNPKVVVNLLPKLRVTVDLMMQRRWLGERFMCGAGRFA
Ga0193735_10304672	3300020006	Soil	LRATRPQASPAGYSCVESVCSLFEKTMRINNRLSGLSSPQTIEQFHQARLVRITHGGFAIWFDPFGVLNPKVVVNLLPKLRVTVDLMMQRRWLGERFMCGAGWFA
Ga0193735_11578862	3300020006	Soil	MRINNRLSGFSSRQTVEQLHQARLVRITHGRFATWLDPFGMLNPKVVVNLLPELCVSVDLMMQGRWLGERFMC
Ga0222622_100365334	3300022756	Groundwater Sediment	VLPQLLCSCWVESVCSLFEKPMRIKNRVSGFSPRQTIEQFHKARLVRITHGRFAIWLDPFGVLNPKVVVNLLPEFHVSVDLMRRGRWPGERFMGGAGWFV
Ga0193714_10011684	3300023058	Soil	MRIKNRVSGFSPRQTIEQFHKARLVRITHGRFAIWLDPFGVLNPKVVVNLLPEFHVSVDLMRRGRWPGERFMGGAGWFV
Ga0207685_104641641	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	SPPRTCRAVELLHRCRLESVCSLFEKPMRINNRLSGFSPRQTIEQFHQARLVRITHGRFAIWRDPFGVLDPKVVVNLLPELHVSVDFMRRRLWPNERFMSGAGWFV
Ga0207684_105319641	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRINNTLSGFSSPQTIEQFHQAHLVRITHGRFAIRLDPFRVLNPKVVVNLLPELRVSVDLMMQGRWLGERFMCGTGRFA
Ga0207693_111084201	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRINNRLSGFSSPQTIEQFHQARLVRITHGRFAIRLDPFRVLNPKVVVNLLPELRVSVDLMMQGRWLGERFMCGTGRFA
Ga0207657_105226121	3300025919	Corn Rhizosphere	MRVNNRLSGFSPRQTIEQFHQARLVRITHGRFAIWLDPFGVLNPKVVVNLLPELHVGVDLMRRGRLPGDRFMGGAGWFV
Ga0207701_100055623	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MCSLFQKTVRINNRLSGFSSLQTIEQFHQARLVRITLGRFATWFYPIRVLNPKVVVNLLPELGVSVDLLVHGRWLGERFMFGAG
Ga0207665_100575384	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LSGFSPRQTPRQTIEQFHQARLVRITHGRFAIWLDPFGVLDPKVVVNLLPELHVSVDFMRRGRWPNERFMSGAGWFV
Ga0207679_102031922	3300025945	Corn Rhizosphere	MRINNRLSGFSPRQTIEQVHQAPLVRITHGRFAIWLDPFGVLDPKVVVNLLPELHVSVDFMRRGRWPDKRFMSGARWFV
Ga0207674_110058402	3300026116	Corn Rhizosphere	MRINNRLSGFSPRQTIEQVHQAPLVRITHGRFAIWLDPFGVLDPKVVVNLLPELHVSVDFMRRGRWPDKRF
Ga0209468_10977632	3300026306	Soil	SFAADTPKVFARQGGQAVQAGYSCAESVCSLFEKTMRINNRLSGFSSPQTMEQFHQARLVRITHGRFAIWLDPFRVLNPKVVVNLLPELCVSVDLMMQGRWLGERFMCGAGRFV
Ga0209472_12060541	3300026323	Soil	ARQGGQAVQAGYSCAESVCSLFEKTMRINNRLSGFSSPQTMEQFHQARLVRITHGRFAIWLDPFRVLNPKVVVNLLPELCVSVDLMMQGRWLGERFMCGAGRFV
Ga0209470_10508614	3300026324	Soil	MRINNRPGRSSSRWTIEQFHETRLVRITHGGFAIWLDPFGMLDPEVVVNLSPELRVSVDLMRRGRWFGE
Ga0209266_10565381	3300026327	Soil	QGGQAVQAGYSCAESVCSLFEKTMRINNRLSGFSSPQTMEQFHQARLVRITHGRFAIWLDPFRVLNPKVVVNLLPELCVSVDLMMQGRWLGERFMCGAGRFV
Ga0209267_10246742	3300026331	Soil	MGIDNRLGGFSSLQRSEQVHEARLVRIAHGRFAIWLDPFGMLDPEVIVNLLPKLSVSVDLMRKGHWLGERFRCGVRRLI
Ga0209159_12806491	3300026343	Soil	AVQAGYSCAESVCSLFEKTMRINNRLSGFSSPQTMEQFHQARLVRITHGRFAIWLDPFRVLNPKVVVNLLPELCVSVDLMMQGRWLGERFMCGAGRFV
Ga0257159_10609371	3300026494	Soil	MRINNSLSGFSPRQTIEQFHQARLVRITHGRFAIWLDPFGVLDPKVVVNLLPELHVSVDFMRRGLWPNERFMSGA
Ga0209807_10551003	3300026530	Soil	MISGEIFRVQAGYSCAESVSSLFEKTMRINNRLSGFSSRQTIEQFPQARLVRITHRRFAIWLDPFRVLYPEIVVNLLPEFRISMDLMMQGRWPGERFMRGAGWLVRLA
Ga0209056_100314408	3300026538	Soil	LFEEPMRINNRLSGFSSRQTIEQFRQARLVRITHGRFAIWLDPFGVLNPKVVVNLLPKLHASVDLMMQRRWPGERFMCGAGWFV
Ga0209376_11516531	3300026540	Soil	MRINNRPGRSSSRWTIEQFHETRLVRITHGGFAIWLDPFGMLDPEVVVNLSPELRVSVDLMRRGRWFGERF
Ga0207512_1011271	3300026709	Soil	MRINNRLGGFSPRQTIEQFHQARLVRITHGRFAIWLDPFGMLNPEVVVNLLPKLDVSVDLMRLGRWLGERFMGGAGPFV
Ga0247820_107459282	3300028597	Soil	GFSLRQPIEEIHQARLVRITHGRFAIWLDPFGVLTPKVVMNLLPKLPVSVDLMMLGRWPGERFMCAAGWFV
Ga0307281_102657501	3300028803	Soil	MRINNRLRGFSSRQTIEQFHQPRLVRITHGRFAIWVDPFGVLNPKVVVNLLPKLHVSVDLMMQGRWRGERFMFGAEWFV
Ga0307312_107334002	3300028828	Soil	MRINNTLSGFSWRQTIEQFRQARLVRITHGRFAIWFDPIRVLNPKVVVNLLPELCVRVDLMMQRRWLGERFMYSLGWFV
Ga0247827_108759881	3300028889	Soil	AESGEITPRYLQLLHSCCVESGCSLFEEPMRINNRLRGFSSRQTIEQFHQPRLIRITHGRFAIWVDPFGVLNPKVVVNLLPKLDVSVDLMMQGRWPGERFMCAAGWFV
Ga0075377_116907401	3300030844	Soil	PESVCSLFEKPMRINNRSSGFSSRQPIEEVHQARLVRITHGRFAIWLDPFGVLTPKVVMNLLPKLPVSVDLMMLGRWPGERFMCAAGWFV
Ga0075373_116525032	3300030945	Soil	MRINNRSSGFSPRQTIEQFHQARLVRITHGRFAIWLDPFGVLDPKVVVNLLPELHVSVDFMRRGLWPNERFMSGAGWFV
Ga0310888_105158371	3300031538	Soil	ATLSQPLRSGGVESVCSLFEKTMRINNRLSGFSSPQTIEQFHKAGFVRVTHGRFATWLDPVRMLNPKIVVNLSPELRVSVDLMMQERWPGQRFMCGAGWFA
Ga0310813_101175232	3300031716	Soil	MRINNRLGGFSSRQTIEQLHEARLVRITHGRFAIWLDPFGMLNPEVVVNLLPKLDVSVDLMRLGRWLGERFMGGAGPFV
Ga0307469_121570281	3300031720	Hardwood Forest Soil	RVDLRCISVASRCARPLPHGVTGHVAPPIRSIREQAGYSCAESVCSLFEKPMRINNRLSGFSSPQTIEQFHQARLVRITHGRFAICLDPFRVLNPKFVVNLLPELRVSADLMMQGRWLGERFMCGAGWFA
Ga0306918_101005243	3300031744	Soil	MCSLFQKTVRINNRLSGFSSLQTIEQFHQARLVRITLGRFATWFYPIRVLNPKVVVNLLPELGISVDLLVHGRWLDGRFMFGAG
Ga0310917_103171661	3300031833	Soil	TVRINNRLSGFSSLETIEQFHQARLVRITLGRFATWFYPVRVLNPKVVVNLLPELRVSVDLLVHGRWLGERFMFCAG
Ga0306919_105358291	3300031879	Soil	MCSLFQKTVRINNRLSGFSSLQTIEQFHQARLVRITLGRFATWFYPIRVLNPKVVVNLLPELRVSVDLLVHGRWLGERFMFCAG
Ga0306925_100818313	3300031890	Soil	MCSLFQKTVRINNRLSGFSSLQTIEQFHQARLVRITLGRFATWFYPIRVLNPKVVVNLLSELRVSVDLLVHGCWLGERFMFGAG
Ga0310884_107583471	3300031944	Soil	MRINNRLRGFSSRQTIEQFHQPRLVRITHGRFAIWVDPFGVLNPKVVVNLLPKLHVSVDLMMQGRWRAERFMFGAEWFV
Ga0310909_112154612	3300031947	Soil	RVDSALILRPTRGLSKQAAYDGVRSMCSLFQKTVRINNRLSGFSSLETIEQFHQARLVRITLGRFATWFYPVRVLNPKVVVNLLPELRVSVDLLVHGRWLGERFMFCAG
Ga0306922_102003105	3300032001	Soil	QAAYDGVRSMCSLFQKTVRINNRLSGFSSLETIEQFHQARLVRITLGRFATWFYPVRVLNPKVVVNLLPELRVSVDLLVHGRWLGERFMFCAG
Ga0307472_1013046282	3300032205	Hardwood Forest Soil	AHPIRSIREQAGYSCAESVCSLFEKSMRINNRLSGFPSRETIEQFHQARLVRITHGRFAICLDPFGVLNPKVVVNLLPELCVSVDLMMQRRWLGERFMCGAGWFV
Ga0310810_103820341	3300033412	Soil	MRINNRLSGFSSRQTIEQFHQARLVRITHGRFAIWLDPFGVLNPKVVVNLLPELCVSVDLMMQGRWLGERFMFGAGWFV
Ga0310811_113058031	3300033475	Soil	VFYVADPLSSIETLYSFAVDTPNAFARHGGQAVKAGYSCAESVCSLFEKPMWINNRLSGFSSRQTIEQFHQARLVRITHGRFAIWLDPFRVLNPKVVVNLLPELRVIVDLIMQGRWLGERFMCGAGWFV
Ga0247830_114899782	3300033551	Soil	MRINNRSSGFSLRQPIEEIHQARLVRITHGRFAIWLDPFGVLTPKVVMNLLPKLPVSVDLMMLGRWPGERFMCAAGWFV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067572

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences