NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F067594

Metagenome / Metatranscriptome Family F067594

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F067594
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 38 residues
Representative Sequence AALAYELLYLRPLRPVPVGPPETGIEEPRPGDAAVS
Number of Associated Samples 111
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.64 %
% of genes near scaffold ends (potentially truncated) 96.00 %
% of genes from short scaffolds (< 2000 bps) 92.00 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (84.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.600 % of family members)
Environment Ontology (ENVO) Unclassified
(24.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 25.00%    β-sheet: 0.00%    Coil/Unstructured: 75.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.33
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF01380SIS 8.00
PF02230Abhydrolase_2 7.20
PF00034Cytochrom_C 5.60
PF13442Cytochrome_CBB3 4.80
PF00127Copper-bind 4.00
PF04185Phosphoesterase 4.00
PF14742GDE_N_bis 3.20
PF03358FMN_red 3.20
PF02566OsmC 2.40
PF00300His_Phos_1 2.40
PF00293NUDIX 1.60
PF07504FTP 1.60
PF13522GATase_6 1.60
PF08359TetR_C_4 1.60
PF00881Nitroreductase 1.60
PF13231PMT_2 1.60
PF00561Abhydrolase_1 1.60
PF05235CHAD 0.80
PF13701DDE_Tnp_1_4 0.80
PF02880PGM_PMM_III 0.80
PF00005ABC_tran 0.80
PF04945YHS 0.80
PF01904DUF72 0.80
PF00082Peptidase_S8 0.80
PF12760Zn_Tnp_IS1595 0.80
PF00572Ribosomal_L13 0.80
PF07883Cupin_2 0.80
PF02769AIRS_C 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 4.00
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 2.40
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 2.40
COG1309DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmATranscription [K] 1.60
COG3227Zn-dependent metalloprotease (Neutral protease B)Posttranslational modification, protein turnover, chaperones [O] 1.60
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 0.80
COG0102Ribosomal protein L13Translation, ribosomal structure and biogenesis [J] 0.80
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 0.80
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 0.80
COG3025Inorganic triphosphatase YgiF, contains CYTH and CHAD domainsInorganic ion transport and metabolism [P] 0.80
COG5607CHAD domain, binds inorganic polyphosphatesFunction unknown [S] 0.80

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms84.00 %
UnclassifiedrootN/A16.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001205|C688J13580_1030352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium683Open in IMG/M
3300001537|A2065W1_10674469All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1217Open in IMG/M
3300001686|C688J18823_10020287All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei4471Open in IMG/M
3300001686|C688J18823_10382008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium913Open in IMG/M
3300001991|JGI24743J22301_10135964Not Available545Open in IMG/M
3300004157|Ga0062590_101341338Not Available707Open in IMG/M
3300005093|Ga0062594_102546328All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria563Open in IMG/M
3300005526|Ga0073909_10451013Not Available614Open in IMG/M
3300005529|Ga0070741_10300683All Organisms → cellular organisms → Bacteria1506Open in IMG/M
3300005529|Ga0070741_10532991All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1057Open in IMG/M
3300005529|Ga0070741_11682617All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium517Open in IMG/M
3300005549|Ga0070704_101254590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium677Open in IMG/M
3300005556|Ga0066707_10471468All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium815Open in IMG/M
3300005560|Ga0066670_10880476All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria544Open in IMG/M
3300005561|Ga0066699_10790998All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300005563|Ga0068855_101552348Not Available678Open in IMG/M
3300005566|Ga0066693_10363491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria584Open in IMG/M
3300005578|Ga0068854_101829005All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria557Open in IMG/M
3300005614|Ga0068856_100386806All Organisms → cellular organisms → Bacteria1418Open in IMG/M
3300006046|Ga0066652_101889365All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300006791|Ga0066653_10614719All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria553Open in IMG/M
3300006847|Ga0075431_101376695All Organisms → cellular organisms → Bacteria665Open in IMG/M
3300006852|Ga0075433_11976767All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300006854|Ga0075425_101520605Not Available756Open in IMG/M
3300006954|Ga0079219_10768351Not Available749Open in IMG/M
3300007076|Ga0075435_100312296All Organisms → cellular organisms → Bacteria1345Open in IMG/M
3300007790|Ga0105679_10020960All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1443Open in IMG/M
3300009012|Ga0066710_100431569All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1971Open in IMG/M
3300009012|Ga0066710_104754533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria508Open in IMG/M
3300009089|Ga0099828_10054230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces3340Open in IMG/M
3300009090|Ga0099827_10035516All Organisms → cellular organisms → Bacteria3642Open in IMG/M
3300009094|Ga0111539_10882667All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300009137|Ga0066709_100502568All Organisms → cellular organisms → Bacteria1708Open in IMG/M
3300009148|Ga0105243_10412892All Organisms → cellular organisms → Bacteria1257Open in IMG/M
3300009174|Ga0105241_11309068All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria690Open in IMG/M
3300009792|Ga0126374_10255233All Organisms → cellular organisms → Bacteria1147Open in IMG/M
3300009823|Ga0105078_1012066All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300009836|Ga0105068_1097435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria571Open in IMG/M
3300009840|Ga0126313_10525945All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria949Open in IMG/M
3300009840|Ga0126313_11304825All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300010036|Ga0126305_10458185Not Available847Open in IMG/M
3300010039|Ga0126309_11111536All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria537Open in IMG/M
3300010046|Ga0126384_11129523All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300010303|Ga0134082_10301298All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium672Open in IMG/M
3300010303|Ga0134082_10441648Not Available561Open in IMG/M
3300010337|Ga0134062_10366423All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300010358|Ga0126370_12077859All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium557Open in IMG/M
3300010403|Ga0134123_10694813All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300012011|Ga0120152_1138744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria652Open in IMG/M
3300012204|Ga0137374_11037818All Organisms → cellular organisms → Bacteria → Terrabacteria group589Open in IMG/M
3300012206|Ga0137380_10666293Not Available905Open in IMG/M
3300012208|Ga0137376_10587572All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria964Open in IMG/M
3300012211|Ga0137377_10013427All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales6991Open in IMG/M
3300012354|Ga0137366_10210376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1450Open in IMG/M
3300012490|Ga0157322_1035679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium551Open in IMG/M
3300012530|Ga0136635_10051082All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1252Open in IMG/M
3300012892|Ga0157294_10051923All Organisms → cellular organisms → Bacteria933Open in IMG/M
3300012899|Ga0157299_10009063All Organisms → cellular organisms → Bacteria1642Open in IMG/M
3300012960|Ga0164301_11820720Not Available512Open in IMG/M
3300012964|Ga0153916_12801807All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300012977|Ga0134087_10606922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria567Open in IMG/M
3300012985|Ga0164308_12041556Not Available534Open in IMG/M
3300012987|Ga0164307_11683285All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria537Open in IMG/M
3300012989|Ga0164305_11506864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria597Open in IMG/M
3300013100|Ga0157373_11021853Not Available618Open in IMG/M
3300013100|Ga0157373_11282925All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria554Open in IMG/M
3300013501|Ga0120154_1058249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium912Open in IMG/M
3300014166|Ga0134079_10341490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium678Open in IMG/M
3300014488|Ga0182001_10656887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria514Open in IMG/M
3300015358|Ga0134089_10409100All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300015371|Ga0132258_10680097All Organisms → cellular organisms → Bacteria2590Open in IMG/M
3300016387|Ga0182040_11344808All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria604Open in IMG/M
3300017974|Ga0187777_11103439All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium577Open in IMG/M
3300017974|Ga0187777_11269099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria540Open in IMG/M
3300018028|Ga0184608_10361360All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium636Open in IMG/M
3300018061|Ga0184619_10132974All Organisms → cellular organisms → Bacteria1130Open in IMG/M
3300018081|Ga0184625_10379267All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium732Open in IMG/M
3300018422|Ga0190265_11678974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium745Open in IMG/M
3300018431|Ga0066655_10436415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium864Open in IMG/M
3300018433|Ga0066667_10211312All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1436Open in IMG/M
3300018433|Ga0066667_11798920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium554Open in IMG/M
3300019279|Ga0184642_1158912All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia548Open in IMG/M
3300020070|Ga0206356_10092701All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria684Open in IMG/M
3300021078|Ga0210381_10163567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium761Open in IMG/M
3300021080|Ga0210382_10118698All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1115Open in IMG/M
3300021412|Ga0193736_1015957All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300021445|Ga0182009_10460709All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium665Open in IMG/M
3300022694|Ga0222623_10411662Not Available513Open in IMG/M
3300023057|Ga0247797_1003685All Organisms → cellular organisms → Bacteria1599Open in IMG/M
3300025915|Ga0207693_11355193All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria530Open in IMG/M
3300025917|Ga0207660_10953230All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria700Open in IMG/M
3300025981|Ga0207640_11177258All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria681Open in IMG/M
3300025981|Ga0207640_11666058All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria575Open in IMG/M
3300026023|Ga0207677_12141553All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300026078|Ga0207702_11648529All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300026089|Ga0207648_11306002All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium682Open in IMG/M
3300026118|Ga0207675_100011342All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria8339Open in IMG/M
3300026275|Ga0209901_1047740All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria956Open in IMG/M
3300027866|Ga0209813_10246695Not Available677Open in IMG/M
3300027875|Ga0209283_10236595All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces1212Open in IMG/M
3300028709|Ga0307279_10056240Not Available654Open in IMG/M
3300028711|Ga0307293_10055983Not Available1228Open in IMG/M
3300028711|Ga0307293_10136697All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium780Open in IMG/M
3300028715|Ga0307313_10277438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium521Open in IMG/M
3300028720|Ga0307317_10182417All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300028721|Ga0307315_10233944Not Available574Open in IMG/M
3300028722|Ga0307319_10070906All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1103Open in IMG/M
3300028722|Ga0307319_10296937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria534Open in IMG/M
3300028744|Ga0307318_10159794All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium775Open in IMG/M
3300028768|Ga0307280_10087670All Organisms → cellular organisms → Bacteria1021Open in IMG/M
3300028784|Ga0307282_10378214All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium685Open in IMG/M
3300028796|Ga0307287_10016509All Organisms → cellular organisms → Bacteria2535Open in IMG/M
3300028814|Ga0307302_10580696All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300028824|Ga0307310_10369833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium707Open in IMG/M
3300028824|Ga0307310_10444666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria648Open in IMG/M
3300028881|Ga0307277_10584611All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300028885|Ga0307304_10153243All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300031366|Ga0307506_10183264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium758Open in IMG/M
3300031421|Ga0308194_10253208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium591Open in IMG/M
3300031938|Ga0308175_101473187All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria760Open in IMG/M
3300032159|Ga0268251_10421474All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300032892|Ga0335081_11981602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria622Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil21.60%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.40%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil4.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.80%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.80%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.00%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.20%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil3.20%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil3.20%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.40%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.40%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost2.40%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.60%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.60%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland1.60%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.60%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.60%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.60%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.80%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.80%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.80%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.80%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.80%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.80%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.80%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.80%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.80%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.80%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.80%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001205Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300001537Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001991Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2Host-AssociatedOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300009823Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50EnvironmentalOpen in IMG/M
3300009836Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012490Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610Host-AssociatedOpen in IMG/M
3300012530Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ85 (21.06)EnvironmentalOpen in IMG/M
3300012892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1EnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013501Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25MEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014488Bulk soil microbial communities from Mexico - San Felipe (SF) metaGEnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019279Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021412Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m1EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300023057Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026275Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 (SPAdes)EnvironmentalOpen in IMG/M
3300027866Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028709Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028720Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028722Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032159Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)Host-AssociatedOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J13580_103035213300001205SoilLAYEFFYLHPVSPEPVGPPETGLDEPRPGEAAAR*
A2065W1_1067446923300001537PermafrostLVGGALAALLYEWLYLRPLAPVPVGPAETGVREPRPGDAAASS*
C688J18823_1002028713300001686SoilTLATLAYEYLYLRPPRPLPVGPPDTGVIEPRPGDAAVS*
C688J18823_1038200813300001686SoilAAVVYDRLYLRPVSPEPVGPPETGLDEPRPGDAAAI*
JGI24743J22301_1013596423300001991Corn, Switchgrass And Miscanthus RhizosphereLAYEYLYLRPPRPIPVGPPDTGVDEPRPGDAAVS*
Ga0062590_10134133823300004157SoilLLGAGIAALAYEHLYLRTLSLEPPGPPETGLEEPRPGDAASI*
Ga0062594_10254632813300005093SoilPVVGGAIAAVLYEWLYLRPLAPVPVGPAESGVREPRPGDAAAS*
Ga0073909_1045101313300005526Surface SoilATLAALAYEYLYLRPPRPIPVGPPDTGVDEPRPGDAAVS*
Ga0070741_1030068313300005529Surface SoilFAAVLYELLYLRPSPRPTPVGPAGAGLEEPGPGDLAAF*
Ga0070741_1053299113300005529Surface SoilAAVGYDWLYLRPLAPPVVGTPESGVAEPRPGDAAQS*
Ga0070741_1168261713300005529Surface SoilAVVYELLYLRPSARPAPVGPPETELEEPRPGDTALS*
Ga0070704_10125459013300005549Corn, Switchgrass And Miscanthus RhizosphereGAGLAALAYEHLYLRPLSPEPVGPPETGLEEPGAGDPAAI*
Ga0066707_1047146823300005556SoilLAALVYDTLYLRTPRPLLPVGPPDSGVIEPRPGDTSVS*
Ga0066670_1088047613300005560SoilALVYEALYLGPPKPEPVGPPETGVEATAPGTAALE*
Ga0066699_1079099813300005561SoilAALGYEWLYLRPLAPPVVGTPESGVAEPRPGDAAES*
Ga0068855_10155234813300005563Corn RhizosphereGGLAALAYDRLYLRPASPEPVGPPETGLDEPGAGEAATL*
Ga0066693_1036349113300005566SoilIAASLYELLYLRPAGPEPVGPPETGVLEEAPGEAATG*
Ga0068854_10182900523300005578Corn RhizosphereSLYELLYLRPARPEPVGPPETGVEEPGAGEAAIS*
Ga0068856_10038680613300005614Corn RhizosphereLIGAGLAALAYEHLYLRPLSPEPVGPPETGLEEPGAGDPAAI*
Ga0066652_10188936523300006046SoilGGLAALAYELLYLRPVRPVPVGPPETGIEEPRPGDAAVS*
Ga0066653_1061471913300006791SoilVGLNEWLYLRPLAPIPVGPPETGVRDPRPGETAVS*
Ga0075431_10137669523300006847Populus RhizosphereAALAYEWLYLRPPAPMPVGPPETGVIEPRPGDTAVS*
Ga0075433_1197676723300006852Populus RhizosphereAALLYEYLYLRRLGPEPVGPPETGLDEPAPGEAAGV*
Ga0075425_10152060523300006854Populus RhizosphereGGAIAALVYEALYLGPPRPEPVGPPETGVEEIAPGTAASE*
Ga0079219_1076835123300006954Agricultural SoilVGGAVAALAYEWLYLRPPAPMPVGPPETGVIEPRPSDTAVS*
Ga0075435_10031229613300007076Populus RhizosphereIVGGAAAALAYEWLYLRPPAPVPVGPPETGVIEPRPGDTAVS*
Ga0105679_1002096043300007790SoilALAALAYEYLYLRPLAPIPVGPPETGVAEPRPGDTAAS*
Ga0066710_10043156913300009012Grasslands SoilVAALAYEYLYLRPLSPVPVGPSETGVREPRPGDTAAS
Ga0066710_10475453313300009012Grasslands SoilAVIAAVMYELLYLRPPRPVPVGPPESGLEEPRPGDAALE
Ga0099828_1005423033300009089Vadose Zone SoilLAGGAVAALAYEWLYLRTLRPEPVGPPETGVREPRPGDAAAP*
Ga0099827_1003551643300009090Vadose Zone SoilGGSLAALVYDTLYLRTRRPLSPVGTPETGVIEPRPGDAALS*
Ga0111539_1088266713300009094Populus RhizosphereGGILGALAYEWLYLRPLKPPVVGPPETGVVEPRPGDTALS*
Ga0066709_10050256843300009137Grasslands SoilVAAAPAAALAYDWLYPRTLRPQPVGPAETGVREPRPGDAAAS*
Ga0105243_1041289213300009148Miscanthus RhizosphereAALAYDRLYLRPASPEPVGPPETGLDEPGAGEAATL*
Ga0105241_1130906813300009174Corn RhizosphereVIAASLYELLYLRPGAEVEPVGPPETGLEEPRPGDAAAS*
Ga0126374_1025523313300009792Tropical Forest SoilGAGIAALAYDHLYLRTLTPVEPPGPPETGLDEPRPGDAASI*
Ga0105078_101206623300009823Groundwater SandGGGLAALAYDALYLRPLRPLVVGPLETGIEEPRPGDVAA*
Ga0105068_109743523300009836Groundwater SandALAYELLYLRPLRPVPVGPPETGIEEPRPGDVAA*
Ga0126313_1052594513300009840Serpentine SoilLVGGGAAALLYDLLYLRPPRPVPVGPPETGVEEPGPGDTVVS*
Ga0126313_1130482523300009840Serpentine SoilALAYEWLYLHPTRPVTVVGPPETGVIEPRPGDTAVS*
Ga0126305_1045818513300010036Serpentine SoilLAALLYEYLYLRPLAPVPVGHPESGVDEPRPGDSVVS*
Ga0126309_1111153623300010039Serpentine SoilVIAAVLYELLYLRPTRPVPVGPPETGLEEPRPGDAALD*
Ga0126384_1112952313300010046Tropical Forest SoilALAYEYVYLRPPAPLPVGPPETGVIEPRPGDSAVS*
Ga0134082_1030129833300010303Grasslands SoilAAALLYEYLYLRPVEPAPVGPPETGLEEPRPGETAAS*
Ga0134082_1044164813300010303Grasslands SoilALAYDWLYLRPPRPLPVGPPETGVIEPRPGETAVT*
Ga0134062_1036642323300010337Grasslands SoilFAGGALAALAYDYLYLRPPRPEPVGPPETGVIEPRPGDAATS*
Ga0126370_1207785923300010358Tropical Forest SoilAALLYEYLYLRPVSPEPVGPPETGLDEPVPGDAAAM*
Ga0134123_1069481333300010403Terrestrial SoilALLFNWLYLRPVDQVPVVGTAESGVLEPRPGDAATD*
Ga0134123_1279664123300010403Terrestrial SoilGGAVAAVVYEVLYLRPTQPAPVGTVESELDEPRPGDAALS*
Ga0120152_113874413300012011PermafrostSLYELLYLRPSRPEPVGPPETGVEEPGAGEATTA*
Ga0137374_1103781813300012204Vadose Zone SoilVGPAAGAVVAALLYEFLFLHEPPTPVGPPETGVLEPRPGDLASS*
Ga0137380_1066629313300012206Vadose Zone SoilALAYEWLYLRPPRPVPVGPPDTGVIEPRPGNTAVS*
Ga0137376_1058757213300012208Vadose Zone SoilPVLGAVAAALAYEWLYLRPLAPVPVGPGETGVREPRPGDAAAS*
Ga0137377_1001342773300012211Vadose Zone SoilLAYDTLYLRTPRPLLPVGPPDSGVIEPRPGDTAAS*
Ga0137366_1021037613300012354Vadose Zone SoilAGAVVAALAYEWLYLRPLGPTPVGPAETGVLEPRPGDAAAS*
Ga0150984_11899746923300012469Avena Fatua RhizosphereYLGPFAGGAIAAVLYELLFLRPTQPAVVGTVESELDEPRPGDAALS*
Ga0157322_103567913300012490Arabidopsis RhizosphereLVGGALAALLYEHVYLRPVSPEPVGPPETGLEEPRPGDAAAT*
Ga0136635_1005108213300012530Polar Desert SandAALAYEFLYLRPLAPVPVGPPETGLEEPRPGETAAS*
Ga0157294_1005192333300012892SoilLLYEYLYLRPVSPEPVGPPETGLEEPRPGDAAAM*
Ga0157299_1000906313300012899SoilGGALAALLYEYLYLRPVSPEPVGPPETGLEEPRPGDAAAM*
Ga0126375_1195341623300012948Tropical Forest SoilGPIVGALVAALGYDYLYLRPAKPPVVGPPETGVEEPGPGETAVS*
Ga0164301_1182072023300012960SoilAIAALVYEALYRGPTRPEPVGPPETGVEEIAPGTAAFE*
Ga0153916_1280180713300012964Freshwater WetlandsVGGAIAALLYEWLYLRPSARPVPVGPPESGVQEPRPGDLASS*
Ga0134087_1060692223300012977Grasslands SoilALAYEWLYLRPLGPEPVGPPETGVVEPRPGETAVS*
Ga0164308_1204155633300012985SoilGLAALVYDRLYLRPVSPEPVGPPETGLDEPRPGDAAAL*
Ga0164307_1168328523300012987SoilAAALYELLYLRPGKLIEPVGPPETGVDEPRAGDAALS*
Ga0164305_1150686413300012989SoilAASLYELLYLRPERPDPVGPHESGVEEPGVGKAALS*
Ga0157373_1102185323300013100Corn RhizosphereAALAYEYLYLRPPRPLPVGPPDTGVIEPRPGDAAVS*
Ga0157373_1128292523300013100Corn RhizosphereASVYELLYLRPDRPAPVGPPESGVEEPGAGEAALS*
Ga0120154_105824923300013501PermafrostAALAYEFLYLRPLAPVPVGPPETGLEEPRPGETALS*
Ga0134079_1034149023300014166Grasslands SoilVAALAYEWLYLRPPAPLPVGPPETGVIEPRPGDSAVS*
Ga0182001_1065688723300014488SoilLAYEHLYLRPLRPVPVGPPETGVEEPRPGDAAVS*
Ga0134089_1040910013300015358Grasslands SoilGGALAALAYDYLYLRPPKPEPVGPPETGVIEPGPGEAATS*
Ga0132258_1068009733300015371Arabidopsis RhizosphereIAALAYEWLYLRPAAPLPVGPPETGVIEPRPGDAAVS*
Ga0182040_1134480823300016387SoilEAAAALGYEYLYLRPLKPPVVGPPETGVEEPGPGETATS
Ga0187777_1110343913300017974Tropical PeatlandVFEDALLVAALAYELLYLRPRARPEPAGPSETGVREPRPGDAAAS
Ga0187777_1126909913300017974Tropical PeatlandLVAALAYEYLYLRPLQPTPVGPPESGVEEPRPGDAAAS
Ga0184608_1036136023300018028Groundwater SedimentGGVLAALAYEYLYLRSPGPLPVGPPDSGVIEPRPGDTAVS
Ga0184619_1013297433300018061Groundwater SedimentAVLYEWLYLRPPRPIPVGPPETGVIEPRPGETAVS
Ga0184625_1037926713300018081Groundwater SedimentGALAALAYDTLYLRALRPLLPVGPPDSGVIEPRPGDSAVS
Ga0190265_1167897413300018422SoilGVAALAYELLYLRPLAPAVVGPPETGLEEPRPGEAAVS
Ga0066655_1043641533300018431Grasslands SoilAGIAALAYEWLYLRPLAPEPVGPPETGVREPRPGDAAAS
Ga0066667_1021131233300018433Grasslands SoilAAAAAGVYELLYLRPGRPEPVGTPESGVDEPRAGEPI
Ga0066667_1179892013300018433Grasslands SoilLAALAYDRLYLRRLPPLPVGPPETGVIEPRPGDAAVS
Ga0184642_115891223300019279Groundwater SedimentAVAALLYDWLYLRPAAPVPVGTPESGVLEPRPGDAAA
Ga0206356_1009270123300020070Corn, Switchgrass And Miscanthus RhizosphereAASVYELLYLRPARPVPVGQPESGVDEPRPGDAALS
Ga0210381_1016356723300021078Groundwater SedimentGLAAFAYDKLYLRPLSPEPVGPPETGLDEPRPGDAAAM
Ga0210382_1011869833300021080Groundwater SedimentALAALAYDTLYLRALRPLLPVGPPDSGVIEPRPGDSAVS
Ga0193736_101595723300021412SoilGAGAISYEWLYLRPLRPPVVGPPETGVVEPRPGDAALS
Ga0182009_1046070913300021445SoilALLYEYLYLRPLEPMPVGPPETGLEEPGPGETALS
Ga0222623_1041166213300022694Groundwater SedimentALGALTYEWLYLRPPAPMPVGPPETGVIEPRPGDTAVS
Ga0247797_100368533300023057SoilAALLYEYLYLRPVSPEPVGPPETGLEEPRPGDAAAM
Ga0207693_1135519323300025915Corn, Switchgrass And Miscanthus RhizosphereIAAALYELLYLRPGKLVEPVGAPETGIDEPRPGDAALS
Ga0207660_1095323013300025917Corn RhizosphereACAYELLYLRPERPEPVGTPESGVEEPGAGKAALS
Ga0207640_1117725823300025981Corn RhizosphereVIAASLYEILYLRPSRPEPVGPPETGVEEPGAGDAALS
Ga0207640_1166605813300025981Corn RhizosphereAVIAASLYELLYLRPARPEPVGPPETGVEEPGAGEAAIS
Ga0207677_1214155323300026023Miscanthus RhizosphereALTYDWLYLRMRTPVEPVGPPKTGVIEPRPGDTALS
Ga0207702_1164852913300026078Corn RhizosphereVVGAAVAAALYEMLYLRPLAPEPVGPEETGVLEPRPGDTASS
Ga0207648_1130600233300026089Miscanthus RhizosphereALAYEHLYLRPLSPEPVGPPETGLEEPGAGDPAAI
Ga0207675_10001134213300026118Switchgrass RhizosphereALVYEYLYLRPVSPEPVGPPETGLEEPGAGETATA
Ga0209901_104774033300026275Permafrost SoilAAATYELLYLRPAQPVPVGPPETGVDEARPGDAAVS
Ga0209813_1024669523300027866Populus EndosphereVGGAVAALAYEWLYLRPPAPMPVGPPETGVIEPRPGDTAVS
Ga0209283_1023659513300027875Vadose Zone SoilLAGGAVAALAYEWLYLRTLRPEPVGPPETGVREPRPGDAAAP
Ga0307279_1005624013300028709SoilGATLAALVYEYLYLRPPRPIPVGPPDTGVIEPRPGDAAVS
Ga0307293_1005598323300028711SoilAGGALGALTYEWLYLRPPAPLPVGPPESGVIEPRPGDTAVS
Ga0307293_1013669713300028711SoilIGAALAALVYDTLYLRVQRPLLPVGPPDSGVIEPRPGDTAVS
Ga0307313_1027743823300028715SoilVAALLYEWLYLRPLGPIPVGPAETGVREPRPGDAAAS
Ga0307317_1018241713300028720SoilAALAYELLYLRPLRPVPVGPPETGIEEPRPGDAAVS
Ga0307315_1023394413300028721SoilVGGTIAALLYEWLYLRPLAPVPVGPAETGVLEPRPGDAAAS
Ga0307319_1007090633300028722SoilALAYDTLYLRALRPLLPVGPPDSGVIEPRPGDSAVS
Ga0307319_1029693713300028722SoilGGGAAALAYELLYLRPLRPAPVGPPETGIEEPRPGDAAVS
Ga0307318_1015979413300028744SoilIGAALAALVYDTLYLRVQRPLLPVGPPDSGVIEPRPGDTAIS
Ga0307280_1008767033300028768SoilLAALAYEYLYLRSPRPLPVGPPDSGVIEPRPGDTALS
Ga0307282_1037821423300028784SoilVGGVLAALAYEYLYLRSPRPLPVGPPDSGVIEPRPGDAALS
Ga0307287_1001650913300028796SoilGGGLAALAYELLYLRPLRPVPVGPPETGIEEPRPGDTAVS
Ga0307302_1058069613300028814SoilVLAALAYELLYLRPPRPLPVGPPETGVIEPGPGDAAVS
Ga0307310_1036983323300028824SoilALAYEFLYLRPLAPVPVGPPETGLEEPRPGETAVS
Ga0307310_1044466623300028824SoilGGVAALAYELLYLRPLRPVPVGPPETGIEEPRPGDAAVS
Ga0307277_1058461113300028881SoilVGAALAAVTYEWLYLRPPRPLPVGTPETGVLEPRPGDTAVS
Ga0307304_1015324313300028885SoilGVAALAYELLYLRPLRPVPVGPPETGIEEPRPGDAAVS
Ga0307506_1018326413300031366SoilALLYEMLYLRPLAPEPVGPEETGVVEPRPGDAATS
Ga0308194_1025320813300031421SoilLAAALAYEWLYLRPTEPEPVGPPETGVEEPGAGRTAAG
Ga0308175_10147318723300031938SoilVAAAWLYEWLYLRPLAPVPVGPPETGVRAPRPGETAVS
Ga0268251_1042147423300032159AgaveAALAYDGLYLRPLAPVPVGPPETGVIEPRPGDAAVS
Ga0335081_1198160213300032892SoilAIAAALYELLYLRPAGPEPVGPPETGVEEPGPGDAALS

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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