Metagenome / Metatranscriptome Family F067599

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067599
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	52 residues
Representative Sequence	MTVTAVELDLGNAMDFRFPAMKTRIVAARFDCGCEWRLVGEGVMKVRCQDHAD
Number of Associated Samples	82
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	84.00 %
% of genes near scaffold ends (potentially truncated)	34.40 %
% of genes from short scaffolds (< 2000 bps)	71.20 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Archaea (97.600 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil (32.800 % of family members)
Environment Ontology (ENVO)	Unclassified (72.800 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.400 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.70% β-sheet: 18.52% Coil/Unstructured: 77.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF00535	Glycos_transf_2	30.40
PF00571	CBS	20.00
PF07883	Cupin_2	14.40
PF01402	RHH_1	9.60
PF06745	ATPase	1.60
PF00437	T2SSE	0.80
PF02747	PCNA_C	0.80
PF01979	Amidohydro_1	0.80
PF01370	Epimerase	0.80
PF00071	Ras	0.80
PF00999	Na_H_Exchanger	0.80
PF02150	RNA_POL_M_15KD	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.80
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.80
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	0.80
COG1594	DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS	Transcription [K]	0.80
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.80
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.80
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.40 %
Unclassified	root	N/A	1.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.40 %
Unclassified	root	N/A	1.60 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	97.60 %
Unclassified	root	N/A	1.60 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	81.60 %
Candidatus Thermoplasmatota	phylum	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota	4.00 %
Unclassified	root	N/A	1.60 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	73.60 %
Thermoplasmata	class	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	4.00 %
Unclassified	root	N/A	1.60 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	73.60 %
Unclassified	root	N/A	1.60 %
Methanomassiliicoccales	order	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Methanomassiliicoccales	0.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	73.60 %
Unclassified	root	N/A	1.60 %
Methanomassiliicoccaceae	family	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Methanomassiliicoccales → Methanomassiliicoccaceae	0.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	73.60 %
Unclassified	root	N/A	1.60 %
Methanomassiliicoccus	genus	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Methanomassiliicoccales → Methanomassiliicoccaceae → Methanomassiliicoccus	0.80 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10006860	All Organisms → cellular organisms → Archaea	4020	Open in IMG/M
3300002558\|JGI25385J37094_10024792	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2134	Open in IMG/M
3300002558\|JGI25385J37094_10049713	All Organisms → cellular organisms → Archaea → Euryarchaeota	1408	Open in IMG/M
3300002558\|JGI25385J37094_10171212	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	581	Open in IMG/M
3300002560\|JGI25383J37093_10016209	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2478	Open in IMG/M
3300002560\|JGI25383J37093_10022628	All Organisms → cellular organisms → Archaea	2109	Open in IMG/M
3300002560\|JGI25383J37093_10025824	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1971	Open in IMG/M
3300002560\|JGI25383J37093_10032413	All Organisms → cellular organisms → Archaea → Euryarchaeota	1742	Open in IMG/M
3300002560\|JGI25383J37093_10032817	All Organisms → cellular organisms → Archaea → Euryarchaeota	1730	Open in IMG/M
3300002560\|JGI25383J37093_10071559	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1075	Open in IMG/M
3300002561\|JGI25384J37096_10025337	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2310	Open in IMG/M
3300002561\|JGI25384J37096_10035447	All Organisms → cellular organisms → Archaea → Euryarchaeota	1943	Open in IMG/M
3300002561\|JGI25384J37096_10053968	All Organisms → cellular organisms → Archaea	1518	Open in IMG/M
3300002561\|JGI25384J37096_10114913	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	913	Open in IMG/M
3300002562\|JGI25382J37095_10062842	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1402	Open in IMG/M
3300002908\|JGI25382J43887_10045635	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2383	Open in IMG/M
3300002909\|JGI25388J43891_1005276	All Organisms → cellular organisms → Archaea	2592	Open in IMG/M
3300005171\|Ga0066677_10071487	All Organisms → cellular organisms → Archaea	1783	Open in IMG/M
3300005174\|Ga0066680_10048130	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2494	Open in IMG/M
3300005174\|Ga0066680_10355745	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	933	Open in IMG/M
3300005180\|Ga0066685_10430913	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	916	Open in IMG/M
3300005181\|Ga0066678_10108396	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1691	Open in IMG/M
3300005181\|Ga0066678_10463348	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	843	Open in IMG/M
3300005186\|Ga0066676_10114235	All Organisms → cellular organisms → Archaea	1656	Open in IMG/M
3300005450\|Ga0066682_10003968	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	6860	Open in IMG/M
3300005553\|Ga0066695_10063848	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2213	Open in IMG/M
3300005556\|Ga0066707_11008620	Not Available	507	Open in IMG/M
3300005558\|Ga0066698_10364936	All Organisms → cellular organisms → Archaea → Euryarchaeota	996	Open in IMG/M
3300005558\|Ga0066698_10541993	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	790	Open in IMG/M
3300005559\|Ga0066700_10048458	All Organisms → cellular organisms → Archaea	2599	Open in IMG/M
3300006034\|Ga0066656_10048421	All Organisms → cellular organisms → Archaea	2443	Open in IMG/M
3300006034\|Ga0066656_10645349	All Organisms → cellular organisms → Archaea → Euryarchaeota	683	Open in IMG/M
3300006791\|Ga0066653_10355496	All Organisms → cellular organisms → Archaea → Euryarchaeota	743	Open in IMG/M
3300006796\|Ga0066665_11602321	Not Available	512	Open in IMG/M
3300006797\|Ga0066659_11694412	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	533	Open in IMG/M
3300007258\|Ga0099793_10004885	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata → Methanomassiliicoccales → Methanomassiliicoccaceae → Methanomassiliicoccus	4802	Open in IMG/M
3300007265\|Ga0099794_10020506	All Organisms → cellular organisms → Archaea	2992	Open in IMG/M
3300009012\|Ga0066710_102636239	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	721	Open in IMG/M
3300009090\|Ga0099827_10010984	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	5859	Open in IMG/M
3300009090\|Ga0099827_10048024	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3196	Open in IMG/M
3300009090\|Ga0099827_10584543	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	962	Open in IMG/M
3300009090\|Ga0099827_11263567	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	642	Open in IMG/M
3300009137\|Ga0066709_100597502	All Organisms → cellular organisms → Archaea	1571	Open in IMG/M
3300009137\|Ga0066709_101746596	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	878	Open in IMG/M
3300009137\|Ga0066709_103916582	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	541	Open in IMG/M
3300009806\|Ga0105081_1073455	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	540	Open in IMG/M
3300009808\|Ga0105071_1055994	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	647	Open in IMG/M
3300009813\|Ga0105057_1004292	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1816	Open in IMG/M
3300009821\|Ga0105064_1059833	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	743	Open in IMG/M
3300010071\|Ga0127477_165848	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1137	Open in IMG/M
3300010081\|Ga0127457_1100104	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1274	Open in IMG/M
3300010100\|Ga0127440_1096606	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1148	Open in IMG/M
3300010102\|Ga0127453_1032270	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	567	Open in IMG/M
3300010112\|Ga0127458_1132534	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	592	Open in IMG/M
3300010124\|Ga0127498_1033464	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	778	Open in IMG/M
3300010124\|Ga0127498_1083732	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	720	Open in IMG/M
3300010130\|Ga0127493_1111207	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1135	Open in IMG/M
3300010301\|Ga0134070_10068016	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1214	Open in IMG/M
3300010303\|Ga0134082_10050703	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1591	Open in IMG/M
3300010304\|Ga0134088_10013089	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	3577	Open in IMG/M
3300010323\|Ga0134086_10162066	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	821	Open in IMG/M
3300010329\|Ga0134111_10013366	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2666	Open in IMG/M
3300010896\|Ga0138111_1115286	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1032	Open in IMG/M
3300012096\|Ga0137389_10739737	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	845	Open in IMG/M
3300012206\|Ga0137380_10023470	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	5675	Open in IMG/M
3300012206\|Ga0137380_10064919	All Organisms → cellular organisms → Archaea	3338	Open in IMG/M
3300012206\|Ga0137380_10084327	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2906	Open in IMG/M
3300012209\|Ga0137379_10157415	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2183	Open in IMG/M
3300012211\|Ga0137377_10884324	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	825	Open in IMG/M
3300012211\|Ga0137377_11705646	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	551	Open in IMG/M
3300012349\|Ga0137387_10053034	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2710	Open in IMG/M
3300012351\|Ga0137386_10018966	All Organisms → cellular organisms → Archaea	4641	Open in IMG/M
3300012379\|Ga0134058_1175145	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	605	Open in IMG/M
3300012383\|Ga0134033_1048934	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	687	Open in IMG/M
3300012383\|Ga0134033_1156511	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1110	Open in IMG/M
3300012390\|Ga0134054_1032771	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1263	Open in IMG/M
3300012390\|Ga0134054_1096100	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1082	Open in IMG/M
3300012400\|Ga0134048_1353816	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1123	Open in IMG/M
3300012401\|Ga0134055_1091797	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1252	Open in IMG/M
3300012401\|Ga0134055_1196944	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1344	Open in IMG/M
3300012403\|Ga0134049_1234617	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1108	Open in IMG/M
3300012406\|Ga0134053_1382170	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1145	Open in IMG/M
3300012927\|Ga0137416_11049167	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	730	Open in IMG/M
3300012972\|Ga0134077_10084430	All Organisms → cellular organisms → Archaea → Euryarchaeota	1212	Open in IMG/M
3300012976\|Ga0134076_10051931	All Organisms → cellular organisms → Archaea → Euryarchaeota	1548	Open in IMG/M
3300012976\|Ga0134076_10409668	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	605	Open in IMG/M
3300012976\|Ga0134076_10566862	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	526	Open in IMG/M
3300017659\|Ga0134083_10077583	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300017659\|Ga0134083_10162548	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	908	Open in IMG/M
3300018431\|Ga0066655_10093888	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	1665	Open in IMG/M
3300018431\|Ga0066655_10111141	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1555	Open in IMG/M
3300018431\|Ga0066655_11141722	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	548	Open in IMG/M
3300018433\|Ga0066667_10122397	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1780	Open in IMG/M
3300018468\|Ga0066662_10111687	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1968	Open in IMG/M
3300018468\|Ga0066662_11719111	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	656	Open in IMG/M
3300018468\|Ga0066662_11789433	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	643	Open in IMG/M
3300021307\|Ga0179585_1062729	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	615	Open in IMG/M
3300026277\|Ga0209350_1000697	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	16962	Open in IMG/M
3300026295\|Ga0209234_1005158	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	4950	Open in IMG/M
3300026295\|Ga0209234_1051596	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1563	Open in IMG/M
3300026296\|Ga0209235_1000126	All Organisms → cellular organisms → Archaea	34248	Open in IMG/M
3300026296\|Ga0209235_1000913	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	15628	Open in IMG/M
3300026296\|Ga0209235_1012047	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	4776	Open in IMG/M
3300026296\|Ga0209235_1039424	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2365	Open in IMG/M
3300026296\|Ga0209235_1237527	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	573	Open in IMG/M
3300026298\|Ga0209236_1030564	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2881	Open in IMG/M
3300026298\|Ga0209236_1094998	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1352	Open in IMG/M
3300026298\|Ga0209236_1145790	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1008	Open in IMG/M
3300026301\|Ga0209238_1160144	All Organisms → cellular organisms → Archaea	674	Open in IMG/M
3300026310\|Ga0209239_1070204	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1531	Open in IMG/M
3300026333\|Ga0209158_1001054	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	18878	Open in IMG/M
3300026480\|Ga0257177_1010233	All Organisms → cellular organisms → Archaea	1234	Open in IMG/M
3300026536\|Ga0209058_1172957	All Organisms → cellular organisms → Archaea → Euryarchaeota	965	Open in IMG/M
3300026538\|Ga0209056_10095395	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	2448	Open in IMG/M
3300027068\|Ga0209898_1030844	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	681	Open in IMG/M
3300027068\|Ga0209898_1050399	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	544	Open in IMG/M
3300027169\|Ga0209897_1000457	All Organisms → cellular organisms → Archaea → Candidatus Thermoplasmatota → Thermoplasmata	4373	Open in IMG/M
3300027671\|Ga0209588_1052593	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1318	Open in IMG/M
3300027882\|Ga0209590_10000548	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	12559	Open in IMG/M
3300027882\|Ga0209590_11068086	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	501	Open in IMG/M
3300027947\|Ga0209868_1023050	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	643	Open in IMG/M
3300027954\|Ga0209859_1041867	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	752	Open in IMG/M
3300028536\|Ga0137415_10660665	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	857	Open in IMG/M
3300031720\|Ga0307469_10005890	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	5515	Open in IMG/M
3300034073\|Ga0310130_0107932	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	840	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.20%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.20%
Sand	Environmental → Terrestrial → Soil → Sand	7.20%
Loam	Environmental → Terrestrial → Soil → Loam	0.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	48.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.80%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	7.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	32.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	24.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.00%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	7.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009806	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_50_60	Environmental	Open in IMG/M
3300009808	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50	Environmental	Open in IMG/M
3300009813	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010071	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010100	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010102	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010112	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010124	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010130	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010896	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012379	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012383	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021307	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027068	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027947	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100068605	3300002558	Grasslands Soil	MTVTAVELDFFNAADFRLPAAKTRIVAAKFDCGCEWRLLDEDVMKVRCRNHAE*
JGI25385J37094_100247924	3300002558	Grasslands Soil	MTVTAVELDLGEAMDFRFPATKTRIVAARFDCGCEWRLVGEGVMTVRCRDHPD*
JGI25385J37094_100497132	3300002558	Grasslands Soil	MTVTAVELDLGKAMDFRFPATRTRVVAARFDCGCEWRLVGDGVMKVRCRDHPD*
JGI25385J37094_101712122	3300002558	Grasslands Soil	AGGGSMTVTAVELDLGNAMDFRFPARKTRIVAARFDCGCEWRLVGEGVMKVRCPDHGD*
JGI25383J37093_100162091	3300002560	Grasslands Soil	MTVTAVELDLGKRMDFRFPATKTRIVAARFDCGCEWRLVGEGVMKVRCQDHAD*
JGI25383J37093_100226283	3300002560	Grasslands Soil	MTVTAVELDLGNAMGFRFPATKTRVVAARFDCGCEWRLVGDGVMKVRCRDHPD*
JGI25383J37093_100258243	3300002560	Grasslands Soil	MTVTAVELDLGNAMDFRFPARKTRIVAARFDCGCEWRLVGEGVMKVRCPDHGD*
JGI25383J37093_100324133	3300002560	Grasslands Soil	MTVTAVELDFCNAADFRLPAAKTRIVAAKFDCGCEWRLLDEDVMKVRCRNHAE*
JGI25383J37093_100328172	3300002560	Grasslands Soil	MTVTAVELDLGNAMDFRFPAMKTRIVAARFDCGCEWRLVGEGVMKVRCPDHGD*
JGI25383J37093_100715592	3300002560	Grasslands Soil	VTVTAVELDPGNAADFRFPEAMTRIVAAKFDCGCEWRLLGDGVMKIQCRDHAE*
JGI25384J37096_100253372	3300002561	Grasslands Soil	MTVTAVELDLGNAMDFLFPAMKTRIVAARFDCGCEWRLVGEGVMKVRCPDHGD*
JGI25384J37096_100354473	3300002561	Grasslands Soil	VTVTAVELDLGNAADFRFPEAMTRIVAAKFDCGCEWRLLGDGVMKIQCRDHAE*
JGI25384J37096_100539681	3300002561	Grasslands Soil	MTVTAVELDLGEAMDFRFPATKTRIVAARFDCGCEWRLVGEGVM
JGI25384J37096_101149131	3300002561	Grasslands Soil	VTVTAVELDLGDAMDFRFPATKTRIVAARFDCGCEWRLVGEGVMT
JGI25382J37095_100628421	3300002562	Grasslands Soil	MTVTAVELALGNPMDFRFPATKTRIVAARFDCGCEWRLVGEGVMKVRCPDHPD*
JGI25382J43887_100456353	3300002908	Grasslands Soil	MTVTAVELDLGNAMDFRFPAXKTRIVAARFDCGCEWRLVGEGVMKVRCPDHGD*
JGI25388J43891_10052765	3300002909	Grasslands Soil	GNAMDFRFPAXKTRIVAARFDCGXEWRLVGEGVMKVRCPDHGD*
Ga0066677_100714871	3300005171	Soil	MTVTAVELDLGNASDFRFPARKTRIVAARFDCGCEWRLIGEGVMKVRCRDHAE*
Ga0066680_100481303	3300005174	Soil	MTAMSVELDLGNAVDFRFPAKKTRIVAAKFDCGCEWRLLGDGVMTVQCRDHPE*
Ga0066680_103557451	3300005174	Soil	MTVTAVELDLGNAADFRFPVARTRIVAAKFDCGCEWRLLGDGVMKVRCRDHVE*
Ga0066685_104309131	3300005180	Soil	MTVTAVELDLGKRTDFRFPATKTRIVAARFDCGCEWRLVGEGVMKVRCQDH
Ga0066678_101083962	3300005181	Soil	MTVTAVELDIGNAADIRLPAATTRIVAAKFDCGCEWRLLDEDVMKVRCRNHAE*
Ga0066678_104633482	3300005181	Soil	MTVTAVELDLGEAMDFRFPATKTRIVAARFDCGCEWRLVGEGVMKVRCQDHAD*
Ga0066676_101142351	3300005186	Soil	MTVTAVELDLGNASDFRFPARKTRIVAARFDCGCEWRLIGEGVMK
Ga0066682_1000396810	3300005450	Soil	MTVTAVELDLGNASDFRFPARKTRIVAARFDCGCEWRLIGEGVMKVRCRD
Ga0066695_100638484	3300005553	Soil	MTVTAVELDLGNASDFRFPARKTRIVAARFDCGCEW
Ga0066707_110086201	3300005556	Soil	LCDVASRESGGTMTVTAVELDLGNASDFRFPARKTRIVAARFDCGCEWRLIGEGVMKVRCRDHAE*
Ga0066698_103649363	3300005558	Soil	LDLGNAADFRFPVARTRIVAAKFDCGCEWRLLGDGVMKVRCRDHVE*
Ga0066698_105419932	3300005558	Soil	MTVTAVELDLGNAADFRFPMTKTRIVAARFDCGCEWRLVGEGVMKVRCSDHAE*
Ga0066700_100484586	3300005559	Soil	DASGEGGGSMTVTAVELDLGEAMDFRFPATKTRIVAARFDCGCEWRLVGEGVMTVRCRDHPD*
Ga0066656_100484211	3300006034	Soil	QSAGPSGEGGRSMTVTAVELDLGNAADFRFPVARTRIVAAKFDCGCEWRLLGDGVMKVRCRDHVE*
Ga0066656_106453492	3300006034	Soil	MTVTAVELDLGKRTDFRFPATKTRIVAARFDCGCEWRLVGEGVMKVRCQDHAD*
Ga0066653_103554962	3300006791	Soil	MTVTAVELDLGNASDFRFPARKTRIVAARFDCGCEWRLIGEGVMKVRCPDHGD*
Ga0066665_116023212	3300006796	Soil	SLCDVASRESGGTMTVTAVELDLGNASDFRFPARKTRIVAARFDCGCEWRLIGEGVMKVRCRDHAE*
Ga0066659_116944122	3300006797	Soil	MTVTAVELDLGEARNFRFPATKTRIVAARFDCGCEWRLVGEGVMTVRCRDHPD*
Ga0099793_100048852	3300007258	Vadose Zone Soil	MTVTAVELGLSDAMDFRFPATKTRVVAARFDCGCEWRLVGDGVMKVRCRDHPD*
Ga0099794_100205064	3300007265	Vadose Zone Soil	MTEMAVELDLGNAVDSRFPAKKTRIVAAKFDCGCEWRLLGDGVMKVRCRDHPE*
Ga0066710_1026362392	3300009012	Grasslands Soil	MTLTAVELDLGNAADFRFPMTKTRIVAARFDCGCEWRLVGEGVMKVRCSDHAE
Ga0099827_100109847	3300009090	Vadose Zone Soil	VTVTAVELDLGDAMDFRFPATKTRIVAARFDCGCEWRLVGEGVMTVRCRDHPD*
Ga0099827_100480242	3300009090	Vadose Zone Soil	MTVTAVELDLGSATDVRFPATKTRVVAARFDCGCEWRLLGEGVMKVRCRDHDE*
Ga0099827_105845432	3300009090	Vadose Zone Soil	MTVTAVELDLGSAADFRFPATKTRVVAARFDCGCEWRLLGDGVMKVRCRDHDE*
Ga0099827_112635672	3300009090	Vadose Zone Soil	MTAMSVELDLGNAVDFRFPAEKTRIVAAKFDCGCEWRLLGDGVMRVRCRDHPE*
Ga0066709_1005975022	3300009137	Grasslands Soil	MTVTAVELDLGKRTDFRFPATKTRIVAARFDCGCEWRLVGEGVMKVRCQDHPD*
Ga0066709_1017465962	3300009137	Grasslands Soil	MTVTAVELDFGNAPDFRFPAAKTRIVAAKFDCGCEWRLLDEDVMKVRCRNHAE*
Ga0066709_1039165822	3300009137	Grasslands Soil	MTVTAVELDLGKAMDFRFPATRTRVVAARFDCGCEWRLVGEGVMKVRCRDHPD*
Ga0105081_10734552	3300009806	Groundwater Sand	MTVTAVELDLGLATDFRFTATKTRIVAARFDCGCEWRLVGEGVMKVRCRDHAD*
Ga0105071_10559942	3300009808	Groundwater Sand	MTVTAVELDLGLATDFRFTATKTRIVAARFDCGCEWRLIGEGVMKVRCRDHAD*
Ga0105057_10042922	3300009813	Groundwater Sand	MTVTAVELDVSDATDFRFPAMRTRIVAARFDCGCEWRLIGEGVMKVRCRDHAD*
Ga0105064_10598332	3300009821	Groundwater Sand	MTVTAVELDLGNATEFRFTATRTRVVAARFDCGCEWRLIGEGVMKVRCRDHAD*
Ga0127477_1658482	3300010071	Grasslands Soil	MTVTAVELDLGNAMDFRFPARKTRIVAARFDCGCEWRLVGEGVMKVRC
Ga0127457_11001043	3300010081	Grasslands Soil	MTVTAVELDLGKAMDFRFPATKTRVVAARFDCGCEWRLVGDGVMKVRCRDHPD*
Ga0127440_10966062	3300010100	Grasslands Soil	MTVTAVELDLGNAMDFRFPARKTRIVAARFDCGCEWRLVGEGVMKVRCPDHVD*
Ga0127453_10322702	3300010102	Grasslands Soil	MTVTAVELDLGKRMDFRFPATKTRIVAARFDCGCEWRLVGEGVMKVRCQDHPD*
Ga0127458_11325342	3300010112	Grasslands Soil	MTVTAVELDFCNAADFRLPAAKTRIVAAKFDCGCEWRLLDEDVMKVQCRNHAE*
Ga0127498_10334642	3300010124	Grasslands Soil	MTVTAVELDLGNAMGFRFPATKTRVVAARFDCGCEWRLVGDGVMKVRCRDH
Ga0127498_10837322	3300010124	Grasslands Soil	MTVTAVELGLGNAMDFRFPATKTRIVAARFDCGCEWRLVGEGVMKVRCPDHGD*
Ga0127493_11112071	3300010130	Grasslands Soil	MTVTAVELDLGNASDFRFSRKTRIVAARFDCGCEWRLIGEGVMKVRCRDHAE*
Ga0134070_100680162	3300010301	Grasslands Soil	MTVTAVELDLGNAMGFRFPATKTRVVAARFDCGCEWRLVGEGVMKVRCPDHGD*
Ga0134082_100507031	3300010303	Grasslands Soil	MTFTAVELDLGNASDFRFPARKTRIVAARFDCGCEWRLI
Ga0134088_100130894	3300010304	Grasslands Soil	MTVTAVELDMGKRMDFRFPATKTRIVAARFDCGCEWRLVGEGVMKVRCQDHAD*
Ga0134086_101620662	3300010323	Grasslands Soil	MTVTAVELDLGNAMDFRFPAMKTRIVAARFDCGCEWRLVGEGVMKVRCPDHVD*
Ga0134111_100133661	3300010329	Grasslands Soil	STEGGGSMTVTAVELDLGNAMGFRFPATKTRVVAARFDCGCEWRLVGDGVMKVRCRDHPD
Ga0138111_11152861	3300010896	Grasslands Soil	MTVTAVELDLGNAMGFRFPATKTRVVAARFDCGCEWRLVGDGVMKVRCRDHP
Ga0137389_107397371	3300012096	Vadose Zone Soil	MTVMAVELDLGNAVDFRFPAEKTRIVAAKFDCGCEWRLL
Ga0137380_100234705	3300012206	Vadose Zone Soil	MTVTAVELDLGNAMGFRFPATKTRVVAARFDCGCEWRLVGEGVMKVRCRDHPD*
Ga0137380_100649196	3300012206	Vadose Zone Soil	MTVTGVELDVGNAIDFRFPATKTRIVAAKFDCGCEWRLLGDGVMKVRCGDHAE*
Ga0137380_100843275	3300012206	Vadose Zone Soil	MTVTAVELDLGKRMDFRFPAPKTRIVAARFDCGCEWRLVGEGVMKVRCQDHAD*
Ga0137379_101574153	3300012209	Vadose Zone Soil	MAVTAVELDVGKRMDFRFPATKTRIVAARFDCGCEWRLVGEGVMKVRCQDHAD*
Ga0137377_108843242	3300012211	Vadose Zone Soil	MTVTAVELDLGNAMGFRFPATKTLVVAARFDCGCEWRLVGEGVMK
Ga0137377_117056462	3300012211	Vadose Zone Soil	MTVTAVELDLGNASDFRFPARKTRIVAARFDCGCEWRLIGEGVMKVRCRDHPD*
Ga0137387_100530344	3300012349	Vadose Zone Soil	MTVTAVEMDLGKRMDFRFPATKTRIVAARFDCGCEWRLVGEGVMKVRCQDHAD*
Ga0137386_100189666	3300012351	Vadose Zone Soil	MTVTAVELDVGNAIDFRFPATKTRIVAAKFDCGCEWRLLGDGVMKVRCGDHAE*
Ga0134058_11751452	3300012379	Grasslands Soil	VTAVELDFCNAADFRLPAAKTRIVAAKFDCGCEWRLLDEDVMKVRCRNHAE*
Ga0134033_10489342	3300012383	Grasslands Soil	MTVTAMELDLGNAADFRFPVARTRIVAAKFDCGCEWRLLGDGVMKVRCRDHVE*
Ga0134033_11565111	3300012383	Grasslands Soil	MTVTAVELDLGKAMDFRFPATKTRVVAARFDCGCEWR
Ga0134054_10327711	3300012390	Grasslands Soil	MTVTAVELDLGNASDFRFPARKTRIVAARFDCGCEWRLIGEGVMKVRCRDYAE*
Ga0134054_10961001	3300012390	Grasslands Soil	MTVTAVELDLGNAMGFRFPATKTRVVAARFDCGCEWR
Ga0134048_13538161	3300012400	Grasslands Soil	MTVTAVELDLGKAMDFRFPARRTRVVAAQFDCGCEWRLVGDG
Ga0134055_10917971	3300012401	Grasslands Soil	MTVTAVELDLGNAMDFRFPAMKTRIVAARFDCGCEWRLVGEGVMKVRCQDHAD*
Ga0134055_11969441	3300012401	Grasslands Soil	MTVTAVELDLGNAMGFRFPATKTRVVAARFDCGCEWRLVGDGVMKVRCRDHPH*
Ga0134049_12346172	3300012403	Grasslands Soil	MTVTAVELDLGNAMDFRFPARKTRIVAARFDCGCEW
Ga0134053_13821701	3300012406	Grasslands Soil	MTVTAVELDLGKAMDFRFPATRTRVVAARFDCGCEWRLVGDGVMKVRCR
Ga0137416_110491672	3300012927	Vadose Zone Soil	GGGPMTEMAVELDLGNAVDSRFPAKKTRIVAAKFDCGCEWRLLGDGVMKVRCRDHPE*
Ga0134077_100844303	3300012972	Grasslands Soil	AVELDLGNAADFRFPVARTRIVAAKFDCGCEWRLPGDGVMKVRCRDHVE*
Ga0134076_100519313	3300012976	Grasslands Soil	ELDFCNAADFRLPAAKTRIVAAKFDCGCEWRLLDEDVMKVRCRNHAE*
Ga0134076_104096682	3300012976	Grasslands Soil	MTVTAVELDLGNASDFRFPARKTRIVAARFDCGCEWRLIGE
Ga0134076_105668622	3300012976	Grasslands Soil	MTVTAVELDFCNAADFRLPAAKTRIVAAKFDCGCEWRLLDEDVMKV
Ga0134083_100775831	3300017659	Grasslands Soil	TAVELDVGNAIDFRFPATKTRIVAAKFDCGCEWRLLGYGVIKVRCGDHAE
Ga0134083_101625482	3300017659	Grasslands Soil	MTVTAVELDLGNAADFRFPMTKTRIVAARFDCGCEWRLVGEGVMKVRCSDHAE
Ga0066655_100938882	3300018431	Grasslands Soil	MTVTAVELDLGNAMGFRFPATKTRVVAARFDCGCEWRLVGDGVMKVRCRDHPD
Ga0066655_101111413	3300018431	Grasslands Soil	MTVTAVELDLGNAMDFRFPARKTRIVAARFDCGCEWRLVGEGVMKVRCPDHGD
Ga0066655_111417221	3300018431	Grasslands Soil	MTVTAVELDLGNAMDFRFPARKTRIVAARFDCGCEWRLVGEGVMKVRCPDHVD
Ga0066667_101223971	3300018433	Grasslands Soil	MTVTAVELDLGNAADFRFPVARTRIVAAKFDCGCEWRLLGDGVMKVRCRDHVE
Ga0066662_101116874	3300018468	Grasslands Soil	CDDASGEGGGSMTVTAVELDLGKRMDFRFPATKTRIVAARFDCGCEWRLVGEGVMKVRCQDHAD
Ga0066662_117191112	3300018468	Grasslands Soil	MTVTAVELDFCNAADFRLPAAKTRIVAAKFDCGCEWRLLDEDVMKVRCRNHAE
Ga0066662_117894332	3300018468	Grasslands Soil	MTVTAVELDLGNASDFRFPARKTRIVAARFDCGCEWRLIGEGVMKVRCRDHAE
Ga0179585_10627291	3300021307	Vadose Zone Soil	MTVTAVELGLSDAMDFRFPATKTRVVAARFDCGCEWRLVGDGVMKVRCRDHPD
Ga0209350_100069715	3300026277	Grasslands Soil	MTVTAVELDLGNAMDFRFPAMKTRIVAARFDCGCEWRLVGEGVMKVRCPDHGD
Ga0209234_10051587	3300026295	Grasslands Soil	MTVTAVELDLGNAMDFLFPAMKTRIVAARFDCGCEWRLVGEGVMKVRCPDHGD
Ga0209234_10515962	3300026295	Grasslands Soil	MTVTAVELDFFNAADFRLPAAKTRIVAAKFDCGCEWRLLDEDVMKVRCRNHAE
Ga0209235_100012625	3300026296	Grasslands Soil	VTVTAVELDPGNAADFRFPEAMTRIVAAKFDCGCEWRLLGDGVMKIQCRDHAE
Ga0209235_10009137	3300026296	Grasslands Soil	MTVTAVELDLGEAMDFRFPATKTRIVAARFDCGCEWRLVGEGVMTVRCRDHPD
Ga0209235_10120474	3300026296	Grasslands Soil	MTVTAVELDLGKRMDFRFPATKTRIVAARFDCGCEWRLVGEGVMKVRCQDHAD
Ga0209235_10394243	3300026296	Grasslands Soil	MTVTAVELDLGKAMDFRFPATRTRVVAARFDCGCEWRLVGDGVMKVRCRDHPD
Ga0209235_12375271	3300026296	Grasslands Soil	VTVTAVELDPGNAADFRFPEAMTRIVAAKFDCGCEWRLLGDGVMKIQCRDH
Ga0209236_10305645	3300026298	Grasslands Soil	MTVTAVELDMGEAMDFRFPATKTRIVAARFDCGCEWRLVGEGVMTVRCRDHPD
Ga0209236_10949982	3300026298	Grasslands Soil	MTVTAVELDLGDAAAFRFPATKTRVVAAKFDCGCEWRLLGDGVMKVLCGDHAE
Ga0209236_11457902	3300026298	Grasslands Soil	MTVTAVELDLGKAMDFRFPATRTRVVAARFDCGCEWRLVGDGVMKV
Ga0209238_11601443	3300026301	Grasslands Soil	GGGSMTVTAVELDLGEAMDFRFPATKTRIVAARFDCGCEWRLVGEGVMTVRCRDHPD
Ga0209239_10702042	3300026310	Grasslands Soil	MTVTAVELDIGNAADIRLPAATTRIVAAKFDCGCEWRLLDEDVMKVRCRNHAE
Ga0209158_10010541	3300026333	Soil	MTVTAVELDLGNAADFRFPVARTRIVAAKFDCGCEWRLLGDG
Ga0257177_10102332	3300026480	Soil	MTVMAMELDLGNAVDFRFPAEKTRIVAAKFDCGCEWRLLGDSVMKVRCRDHAE
Ga0209058_11729573	3300026536	Soil	GRPMTVTAVELDIGNAADIRLPAATTRIVAAKFDCGCEWRLLDEDVMKVRCRNHAE
Ga0209056_100953954	3300026538	Soil	MTVTAVELDLGKAMDFRFPATRTRVVAARFDCGCEWRLVGDGVMKVRCRDH
Ga0209898_10308442	3300027068	Groundwater Sand	REAGGTMTVTAVELDVSDATDFRFPAMRTRIVAARFDCGCEWRLIGEGVMKVRCRDHAD
Ga0209898_10503992	3300027068	Groundwater Sand	DEPGGEGGGTMTVTAVELDLGLATDFRFTATKTRIVAARFDCGCEWRLVGEGVMKVRCRDHAD
Ga0209897_10004575	3300027169	Groundwater Sand	MTVTAVELDVSDATDFRFPAMRTRIVAARFDCGCEWRLIGEGVMKVRCRDHAD
Ga0209588_10525933	3300027671	Vadose Zone Soil	MTEMAVELDLGNAVDSRFPAKKTRIVAAKFDCGCEWRLLGDGVMKVRCRDHPE
Ga0209590_100005488	3300027882	Vadose Zone Soil	VTVTAVELDLGDAMDFRFPATKTRIVAARFDCGCEWRLVGEGVMTVRCRDHPD
Ga0209590_110680862	3300027882	Vadose Zone Soil	MTVTAVELDLGSAADFRFPATKTRVVAARFDCGCEWRLLGEGVMKVRCRDHDE
Ga0209868_10230502	3300027947	Groundwater Sand	MTVTAVELDLGLATDFRFTATKTRIVAARFDCGCEWRLIGEGVMKVRCRDHAD
Ga0209859_10418672	3300027954	Groundwater Sand	MTVTAVELDVSDATDFRFPAMRTRIVAARFDCGCEWRLIGEGA
Ga0137415_106606653	3300028536	Vadose Zone Soil	GGGPMTEMAVELDLGNAVDSRFPAKKTRIVAAKFDCGCEWRLLGDGVMKVRCRDHPE
Ga0307469_100058907	3300031720	Hardwood Forest Soil	MTVTAVELDLGSAADFRFPATKTRIVAAKFDCGCEWRMVGDGVMKVRCRDHGP
Ga0310130_0107932_418_579	3300034073	Fracking Water	MTVTAVELDLGNSVDFRSPATKTRIVAARFACGCEWRVVGEGVMKVRCRDHAD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067599

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences