Metagenome / Metatranscriptome Family F067606

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F067606
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	82 residues
Representative Sequence	LYNDGRKVTQKVEGGGDIEIKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSIEFRRVYDGAAAM
Number of Associated Samples	96
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.60 %
% of genes near scaffold ends (potentially truncated)	93.60 %
% of genes from short scaffolds (< 2000 bps)	83.20 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.200 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (36.000 % of family members)
Environment Ontology (ENVO)	Unclassified (64.800 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.400 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.70% β-sheet: 45.37% Coil/Unstructured: 50.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13620	CarboxypepD_reg	24.80
PF01642	MM_CoA_mutase	9.60
PF00069	Pkinase	8.80
PF13361	UvrD_C	4.00
PF00176	SNF2-rel_dom	3.20
PF00271	Helicase_C	2.40
PF01625	PMSR	2.40
PF13432	TPR_16	1.60
PF04851	ResIII	1.60
PF01979	Amidohydro_1	1.60
PF00890	FAD_binding_2	1.60
PF07617	DUF1579	0.80
PF08239	SH3_3	0.80
PF02910	Succ_DH_flav_C	0.80
PF17189	Glyco_hydro_30C	0.80
PF01713	Smr	0.80
PF00316	FBPase	0.80
PF07992	Pyr_redox_2	0.80
PF04286	DUF445	0.80
PF02749	QRPTase_N	0.80
PF01904	DUF72	0.80
PF13452	MaoC_dehydrat_N	0.80
PF08241	Methyltransf_11	0.80
PF08447	PAS_3	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	35.20
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	9.60
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	2.40
COG0157	Nicotinate-nucleotide pyrophosphorylase	Coenzyme transport and metabolism [H]	0.80
COG0158	Fructose-1,6-bisphosphatase	Carbohydrate transport and metabolism [G]	0.80
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	0.80
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.80
COG2733	Uncharacterized membrane-anchored protein YjiN, DUF445 family	Function unknown [S]	0.80
COG4399	Uncharacterized membrane protein YheB, UPF0754 family	Function unknown [S]	0.80

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.20 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	68.00 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	68.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	55.20 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.80 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	45.60 %
Gemmatimonadetes bacterium 13_2_20CM_1_69_27	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_1_69_27	7.20 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	2.40 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	45.60 %
Gemmatimonadetes bacterium 13_2_20CM_1_69_27	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_1_69_27	7.20 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	2.40 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	45.60 %
Gemmatimonadetes bacterium 13_2_20CM_1_69_27	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_1_69_27	7.20 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	2.40 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	45.60 %
Gemmatimonadetes bacterium 13_2_20CM_1_69_27	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_1_69_27	7.20 %
Gemmatimonadetes bacterium 13_1_40CM_4_69_8	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	2.40 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10061237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1230	Open in IMG/M
3300002560\|JGI25383J37093_10173520	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300002561\|JGI25384J37096_10016946	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2831	Open in IMG/M
3300002561\|JGI25384J37096_10073265	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300005166\|Ga0066674_10284228	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300005172\|Ga0066683_10497866	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	744	Open in IMG/M
3300005174\|Ga0066680_10050989	All Organisms → cellular organisms → Bacteria	2430	Open in IMG/M
3300005174\|Ga0066680_10096048	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1807	Open in IMG/M
3300005178\|Ga0066688_10279964	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1073	Open in IMG/M
3300005180\|Ga0066685_10256880	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_1_69_27	1206	Open in IMG/M
3300005181\|Ga0066678_10328238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	1006	Open in IMG/M
3300005436\|Ga0070713_100081635	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2759	Open in IMG/M
3300005440\|Ga0070705_100276616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1191	Open in IMG/M
3300005451\|Ga0066681_10592919	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300005451\|Ga0066681_10803641	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300005454\|Ga0066687_10365622	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_1_69_27	829	Open in IMG/M
3300005467\|Ga0070706_100033439	All Organisms → cellular organisms → Bacteria	4746	Open in IMG/M
3300005518\|Ga0070699_100160818	All Organisms → cellular organisms → Bacteria	1987	Open in IMG/M
3300005518\|Ga0070699_101555428	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	606	Open in IMG/M
3300005526\|Ga0073909_10270032	All Organisms → cellular organisms → Bacteria → Acidobacteria	763	Open in IMG/M
3300005536\|Ga0070697_100126464	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2141	Open in IMG/M
3300005540\|Ga0066697_10493421	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300005552\|Ga0066701_10755858	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	581	Open in IMG/M
3300005556\|Ga0066707_10101915	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300005556\|Ga0066707_10743553	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	611	Open in IMG/M
3300005556\|Ga0066707_11016605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	505	Open in IMG/M
3300005559\|Ga0066700_11133870	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	511	Open in IMG/M
3300005561\|Ga0066699_10358459	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1042	Open in IMG/M
3300005568\|Ga0066703_10059876	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2156	Open in IMG/M
3300005568\|Ga0066703_10621649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	627	Open in IMG/M
3300005574\|Ga0066694_10463187	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005575\|Ga0066702_10569227	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	683	Open in IMG/M
3300006034\|Ga0066656_10039387	All Organisms → cellular organisms → Bacteria	2677	Open in IMG/M
3300006791\|Ga0066653_10100457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1318	Open in IMG/M
3300006797\|Ga0066659_10292255	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	1239	Open in IMG/M
3300006797\|Ga0066659_11544778	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	556	Open in IMG/M
3300006800\|Ga0066660_10525089	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	994	Open in IMG/M
3300006800\|Ga0066660_10596603	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_1_69_27	923	Open in IMG/M
3300007255\|Ga0099791_10276700	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	798	Open in IMG/M
3300007258\|Ga0099793_10047044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1890	Open in IMG/M
3300007258\|Ga0099793_10193381	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	974	Open in IMG/M
3300009090\|Ga0099827_11455283	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	596	Open in IMG/M
3300009137\|Ga0066709_100524816	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_4_69_8	1672	Open in IMG/M
3300009137\|Ga0066709_101810641	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	856	Open in IMG/M
3300009137\|Ga0066709_102421471	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	712	Open in IMG/M
3300010125\|Ga0127443_1077682	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300010303\|Ga0134082_10048969	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300010304\|Ga0134088_10246091	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	860	Open in IMG/M
3300010325\|Ga0134064_10487777	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	509	Open in IMG/M
3300010326\|Ga0134065_10029059	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1611	Open in IMG/M
3300010326\|Ga0134065_10123294	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	882	Open in IMG/M
3300010336\|Ga0134071_10000491	All Organisms → cellular organisms → Bacteria → Proteobacteria	13059	Open in IMG/M
3300010336\|Ga0134071_10055467	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1807	Open in IMG/M
3300010373\|Ga0134128_10106145	All Organisms → cellular organisms → Bacteria	3191	Open in IMG/M
3300011269\|Ga0137392_10259141	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300012189\|Ga0137388_10601676	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300012204\|Ga0137374_11288978	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	505	Open in IMG/M
3300012206\|Ga0137380_10260994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1559	Open in IMG/M
3300012207\|Ga0137381_11237390	Not Available	640	Open in IMG/M
3300012208\|Ga0137376_10497086	All Organisms → cellular organisms → Bacteria	1058	Open in IMG/M
3300012285\|Ga0137370_10027808	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2909	Open in IMG/M
3300012351\|Ga0137386_10164371	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1590	Open in IMG/M
3300012357\|Ga0137384_10451809	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1058	Open in IMG/M
3300012359\|Ga0137385_10218901	All Organisms → cellular organisms → Bacteria	1657	Open in IMG/M
3300012380\|Ga0134047_1068031	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012917\|Ga0137395_10462641	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	912	Open in IMG/M
3300012917\|Ga0137395_10978526	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	607	Open in IMG/M
3300012923\|Ga0137359_11513315	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	559	Open in IMG/M
3300012925\|Ga0137419_10449656	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300012972\|Ga0134077_10083498	All Organisms → cellular organisms → Bacteria	1219	Open in IMG/M
3300012972\|Ga0134077_10466312	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	555	Open in IMG/M
3300014154\|Ga0134075_10121730	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_1_69_27	1109	Open in IMG/M
3300015052\|Ga0137411_1207614	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300015356\|Ga0134073_10021501	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1552	Open in IMG/M
3300015357\|Ga0134072_10153402	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_1_69_27	760	Open in IMG/M
3300017654\|Ga0134069_1001319	All Organisms → cellular organisms → Bacteria	6556	Open in IMG/M
3300017656\|Ga0134112_10215027	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	755	Open in IMG/M
3300017656\|Ga0134112_10415191	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	558	Open in IMG/M
3300017659\|Ga0134083_10546628	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	524	Open in IMG/M
3300017959\|Ga0187779_10030604	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3096	Open in IMG/M
3300017974\|Ga0187777_10120451	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300018431\|Ga0066655_11199866	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300018433\|Ga0066667_11807256	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	553	Open in IMG/M
3300018482\|Ga0066669_11906537	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	553	Open in IMG/M
3300018482\|Ga0066669_12260952	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300018482\|Ga0066669_12260954	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300019255\|Ga0184643_1393838	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2605	Open in IMG/M
3300019878\|Ga0193715_1050948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	888	Open in IMG/M
3300020015\|Ga0193734_1008074	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1961	Open in IMG/M
3300021080\|Ga0210382_10434331	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	581	Open in IMG/M
3300021086\|Ga0179596_10183902	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1011	Open in IMG/M
3300025906\|Ga0207699_10888580	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	657	Open in IMG/M
3300026296\|Ga0209235_1138204	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	993	Open in IMG/M
3300026296\|Ga0209235_1163505	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	858	Open in IMG/M
3300026296\|Ga0209235_1184042	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	764	Open in IMG/M
3300026309\|Ga0209055_1090799	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1243	Open in IMG/M
3300026310\|Ga0209239_1147245	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	941	Open in IMG/M
3300026310\|Ga0209239_1228117	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300026313\|Ga0209761_1314849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	537	Open in IMG/M
3300026314\|Ga0209268_1002750	All Organisms → cellular organisms → Bacteria	8291	Open in IMG/M
3300026314\|Ga0209268_1136992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	604	Open in IMG/M
3300026318\|Ga0209471_1128496	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_1_69_27	1071	Open in IMG/M
3300026318\|Ga0209471_1303304	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300026322\|Ga0209687_1221904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_1_69_27	582	Open in IMG/M
3300026324\|Ga0209470_1003995	All Organisms → cellular organisms → Bacteria	9969	Open in IMG/M
3300026328\|Ga0209802_1024420	All Organisms → cellular organisms → Bacteria	3262	Open in IMG/M
3300026330\|Ga0209473_1007277	All Organisms → cellular organisms → Bacteria	5685	Open in IMG/M
3300026333\|Ga0209158_1009862	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4760	Open in IMG/M
3300026333\|Ga0209158_1360852	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	506	Open in IMG/M
3300026528\|Ga0209378_1019272	All Organisms → cellular organisms → Bacteria	3841	Open in IMG/M
3300026528\|Ga0209378_1045371	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2177	Open in IMG/M
3300026537\|Ga0209157_1193271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	869	Open in IMG/M
3300026538\|Ga0209056_10261582	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1222	Open in IMG/M
3300026540\|Ga0209376_1095392	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_1_69_27	1538	Open in IMG/M
3300026547\|Ga0209156_10002479	All Organisms → cellular organisms → Bacteria	14413	Open in IMG/M
3300026557\|Ga0179587_10674905	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300026557\|Ga0179587_10963129	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	562	Open in IMG/M
3300027388\|Ga0208995_1016228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1278	Open in IMG/M
3300027388\|Ga0208995_1018547	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1199	Open in IMG/M
3300027748\|Ga0209689_1167772	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1017	Open in IMG/M
3300028824\|Ga0307310_10144264	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300031152\|Ga0307501_10014989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1376	Open in IMG/M
3300031720\|Ga0307469_11855816	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	583	Open in IMG/M
3300031720\|Ga0307469_12472920	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300031962\|Ga0307479_11764863	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_1_69_27	571	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.40%
Aquatic	Environmental → Aquatic	1.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.40%
Freshwater	Environmental → Aquatic → Freshwater	1.60%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.60%
Loam	Environmental → Terrestrial → Soil → Loam	7.20%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.60%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	50.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.60%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.40%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	36.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.20%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.40%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010125	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100612372	3300002558	Grasslands Soil	TDSSVAFAPDSGAALVLSRDGRKVTQKVEGGGDVEVKGHWQGNDFVVERKVSGGGKVTEDYLRSQDGKHLFVIVKSEGGRGRSIEFRRVYDGAVAN*
JGI25383J37093_101735202	3300002560	Grasslands Soil	KVTQIVDGGGDVEIKGHWQGSDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSIEFRRVYDGAAAK*
JGI25384J37096_100169462	3300002561	Grasslands Soil	GRKLKQQVDGGGDVQIKAHWQGNDFVVERKVSRGGKVTEDYLRSQDGKQLYVIVSFDGGRGRTIDFRRVYDAAASAPQTQ*
JGI25384J37096_100732652	3300002561	Grasslands Soil	QIVDGGGDVEIKGHWQGSDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSIEFRRVYDGAAAK*
Ga0066674_102842282	3300005166	Soil	GGGDVEIKGRWQGNDFVVERKVSGDGKVTEDYLRSQDGTQLYVIVKFEGGRGRSIEFRRVYDGAAAM*
Ga0066683_104978662	3300005172	Soil	LHDDGRKVTQIVDGGGDVEIKGHWQGSDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSLEFRRVYDGVAVT*
Ga0066680_100509891	3300005174	Soil	KQTVDGGGDVEIKARWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVSLDNGRGRSIEFRRVYDAVAS*
Ga0066680_100960482	3300005174	Soil	VTQKVEGGGDVQITGHWQGNDFVVERKVSGGGKVTEDYLRSQDGKHLVVIVKSEGGRGRSIEFRRVYDGAVAN*
Ga0066688_102799641	3300005178	Soil	DSTLTFTSDSGVALVLYGDGRKLKQSAEGSGDVEIKAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSVDGGRGRTSDFRRVYDAAASTPQPQ*
Ga0066685_102568802	3300005180	Soil	VGSGAGDIEVDLKARWQGNDFVVERKVSGGGKVTEDYLRSRDGKQLFVIVSLDNGRGRSIEFRRVYDAVTS*
Ga0066678_103282382	3300005181	Soil	PLLLYADGRKLVQKVDGGGDLEIKAHWQGNDFVIERRVKGGGKVTEDYLRSQDGKQLFVIVGFEGSGGRSIQFRRVYDPAS*
Ga0070713_1000816353	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TVEGGGDVEIKARWQGNDFVVERKVSGGGKVTEDYLRSRDGKQLFVIVALDNVRGRSVEFRRVYDAVPS*
Ga0070705_1002766163	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LTIVETDSSLAFRSDSGAALVLHDDGRKVTQIVDGGGDVEIKGHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSLEFRRVYDGA*
Ga0066681_105929192	3300005451	Soil	NDGRKVTQKVEGGGDVEIKGRWLGNDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVKFEGGRGRSIEFRRVYDGAASQ*
Ga0066681_108036412	3300005451	Soil	GDVEIKAHWQGNDFVVERKVSGGGKVTENYLRSQDGKQLYVIVSFDGGRGRTIDFRRVYDAAASAPQAQ*
Ga0066687_103656221	3300005454	Soil	ISESDSTVSVTPDSGAVVDLYADGRKVKQTVEGGGDIEIKAHWQGNDFVVERKVSGGGKVTEDYLKSQDGKQLFVIVSLDTGRGRSVEFRRVYDAVTS*
Ga0070706_1000334391	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	TQKVEGGGDVEIKGHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVNFEGGRGRALEFRRVYDGAAAQ*
Ga0070699_1001608181	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GGGDVEIKGHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVNFEGGRGRALEFRRVYDGAAAH*
Ga0070699_1015554282	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VTLTGEDGKPLVLYADGRKLVQRVDGGGDLEIKAHWQGNDFVVERRVKGGGKVTEDYLRSQDGKQLFVIVGFEGWGGRSIQFRRVYDAAS*
Ga0073909_102700323	3300005526	Surface Soil	VLPSKGHKVRRKATVEGEGDVDIKGQWQGSDFVVERKVSGGGKVTEDYLREPQGKQLFVIVSFQDPRGRDVTFRRIYDPAE*
Ga0070697_1001264642	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LVLHDDGRKVTQIVDGGGDVEMKGHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSLEFRRVYDGA*
Ga0066697_104934212	3300005540	Soil	RKLKQSVEGGGDVEIKGHWQGNDFVVERKVSGGGKVSEDYLRSQDGTQLYVIVSSDGGRGRTIEFRRVYDRAASGAPAP*
Ga0066701_107558582	3300005552	Soil	GEDGQPLLLYADGRKLVQKVDGGGDLEIKAHWQGNDFVVERRVKGGGKVTEDYLRSQDGKQLFVIVGFEGSGGRSIQFRRVYDPAS*
Ga0066707_101019151	3300005556	Soil	KVEGAGDVEIKGHWQGNDFVVERKVSGGGKVTEDYLRSEDGKHLFVIVKSEGGRGRSIEFRRVYDGAATK*
Ga0066707_107435531	3300005556	Soil	VEGEGAVDIKGHWQGNDLVVERSVSGGGKVSEDYLRSSDGKQLFVIVSFDGGRGRSIMFRRIYDPAE*
Ga0066707_110166051	3300005556	Soil	TFTIDSGTALILYHDGRKLKQTVDGGGDVEITARWQGNALVVRRDVSGGGTVTEDYLRSQDGKQLSVIVSVTGIRGRDLSFRRVYELQL*
Ga0066700_111338701	3300005559	Soil	GGDVETKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGRQLYVIVGFEARRGRSIEFRRVYDASAH*
Ga0066699_103584591	3300005561	Soil	YGDGRKLKQSVEGGGDVEIKAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSFDGGRGRTIDFRRVYDAAL*
Ga0066703_100598762	3300005568	Soil	LVLYGDGRKFKQSVEGGGDIEIKARWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVSVDPGRGRTIDFRRVYDPAATAPQTQ*
Ga0066703_106216492	3300005568	Soil	VTQKVEGGGDVQITGHRQGNDFVVERKVSGGGKVTEDYLRSQDGKHLFVIVKSEGERGRSIEFRRVYDGAVAN*
Ga0066694_104631872	3300005574	Soil	KVTQIVDGGGDVEIKGHWQGSDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSLEFRRVYDGVAVK*
Ga0066702_105692271	3300005575	Soil	ALTIVTSDSTLTFTSDSGAALVLYGDGRKLKQSAEGSGDVEIKAHWQGNDFVVERKVSGGGKVTENYLRSQDGKQLYVIVSFDGGRGRTIDFRRVYDAAL*
Ga0066656_100393873	3300006034	Soil	VLVEGGGDVEIKGRWQGNDFVVERKVSGDGKVTEDYLRSQDGTQLYVIVKFEGGRGRSIEFRRVYDGAAAM*
Ga0066653_101004572	3300006791	Soil	TVTLTADSGAALVIYSDGRTLKQPVAGGGDVEIKGRWQGNDFVVERKVSGGGKVSEDYLRSQDGKQLYVIVSFDGGRGRSIEFRRVYDRAASAAPSP*
Ga0066659_102922552	3300006797	Soil	LLYADGRKLVQKVDGGGDLETKAHWQGNDFVVERRVKGGGKVTEDYLRSQDGKQLFVIVGFEGWGGR*
Ga0066659_115447782	3300006797	Soil	KVTQKVEGGGDVEIKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVNFEGGRGRALEFRRVYDGAAAQ*
Ga0066660_105250892	3300006800	Soil	GDGRKLKQSVEGGGDVEIKAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSFDGGRGRTIDFRRVYDAAL*
Ga0066660_105966032	3300006800	Soil	FTADTGAAVVLYGDGRKLKQPVDGGGDVEINAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVSFDNGRGRSVEFRRVYDAVTS*
Ga0099791_102767002	3300007255	Vadose Zone Soil	TIAETDSSVAFASDSGAALLLYSDGRKVTQKVEAGGDVEIKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSFEGGRGRSIEFRRVYDGGRAEQ*
Ga0099793_100470443	3300007258	Vadose Zone Soil	GAALLLYSDGRKVTQKVEGGGDVEIKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVNFAGGRGRALEFRRVYDGAAAQ*
Ga0099793_101933812	3300007258	Vadose Zone Soil	GAALLLYSDGRKVTQKVEGGGDVEIKGRWQGNDFVVERKVSGGGKITEDYLRSQDGKQLYVIVNVEGGRGRAIEFRRVYDGAVAR*
Ga0099827_114552832	3300009090	Vadose Zone Soil	DGGGDVEIKGHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSLEFRRVYDGAGDPRP*
Ga0066709_1005248161	3300009137	Grasslands Soil	QADSAMTLTGEDGQPLVLYADGRKLVQKVDGGGDLETKAHWQGNDFVVERRVKGGGKVTEDYLRSQDGKQLFVIVGFEGSGGRSIQFRRVYDPAS*
Ga0066709_1018106411	3300009137	Grasslands Soil	DVEVKGHWQRNDFVVERKVSGGGKVTEDYLRSQDGKHLFVIVKSESGRGRSIEFRRVYDGAVAN*
Ga0066709_1024214711	3300009137	Grasslands Soil	AALVLYGDGRKLKQSVEGGGDVEIKAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSFDGGRGRTIDFRRVYDAAL*
Ga0127443_10776821	3300010125	Grasslands Soil	QKVEGGGDIEIKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSIEFRRVYDGAAAM*
Ga0134082_100489691	3300010303	Grasslands Soil	TGAALVLYNDGRKVTQKVEGGGDIEIKGRWQGNDFVVERKVSGGGKVTEDYLRSEDGKQLYVIVKFEGGRGRSIEFRRVYDGAAAM*
Ga0134088_102460911	3300010304	Grasslands Soil	FASDSGGALDLYGDGRKVTQKVEGAGDVEIRGHWQGNDFVVERKVSGGGKVTEDYLRSEDGKHLFVIVKSEGGRGRSIEFRRVYDGAATK*
Ga0134064_104877772	3300010325	Grasslands Soil	VGSDSGAALVVYNDGLKVTQKVEGGGDVEIKGRWLGTDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVKFEGGRGRSIEFRRVYDGAASQ*
Ga0134065_100290592	3300010326	Grasslands Soil	DSSLAFGSDSGAALVLHDDGRKVTQIVDGGGDVEIKGHWQGSDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSLEFRRVYDGVAVK*
Ga0134065_101232941	3300010326	Grasslands Soil	PDSGAALVIYGDGRKLKQSVEGGGDVEIKGHWQGNDFVVERKVSGGGKVSEDYLRSQDGTQLYVIVSSDGGRGRTIEFRRVYDRAASGAPAP*
Ga0134071_100004911	3300010336	Grasslands Soil	IVTSDSTLSFTSDSGAALVLYGDGRKLKQSVEGGGDVEIKAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSFDGGRGRTIDFRRVYDAAL*
Ga0134071_100554672	3300010336	Grasslands Soil	SDSGAALVLYGDGRKLKQSVDGGGDVEIKAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSFDGGRGRSIDFRRVYDTAATALQPQ*
Ga0134128_101061453	3300010373	Terrestrial Soil	EGGGDIEIKGHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVNFEGGRGRALEFRRVYDGAAAQ*
Ga0137392_102591413	3300011269	Vadose Zone Soil	TQIVDGGGDVEIKGHWQGNDFVVERKVSGGGKVTEDYLRSQDAKQLYVIVKFEGGRGRSLEFRRVYDGGV*
Ga0137388_106016761	3300012189	Vadose Zone Soil	MAGRSPRKSKGGGDVEIKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVNFEGGRGRALEFQRVYDGAAAQ*
Ga0137374_112889782	3300012204	Vadose Zone Soil	AFGADSDAAPLVLHSDGRKVTQKVEGEGDVEIKGSWQGSDFVVERKVSGGRKVTEDYLRSQDGQQLYVIVKFEGGPGRSLEFRRVYDGAAAD*
Ga0137380_102609943	3300012206	Vadose Zone Soil	SSVAVRSDTGAALVLYNDGRKVTQKVEGGGDIEIKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSIEFRRVYDGTTAM*
Ga0137381_112373902	3300012207	Vadose Zone Soil	TQEGDGAVDIKGRWQGNDFVVERSVSGGGKVTEDYLRSAEGKQLFVIVSFDGGRGRSITFRRIYDPIQ*
Ga0137376_104970862	3300012208	Vadose Zone Soil	REAKVEGEGAVDIKGHWQGNDLVVERSVSGGGKVSEDYLRSSDGKQLFVIVSFDGGRGRSIMFRRIYDPAE*
Ga0137370_100278081	3300012285	Vadose Zone Soil	AVVLYNDGRKVTQKVEGGGDIEIKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSIEFRRVYDGATAM*
Ga0137386_101643712	3300012351	Vadose Zone Soil	GRKRKQSVEGGGDVEIKAHWQGNDFVVERKVSSGGKVTEDYLRSQDGKQLYVIVSFDGGRGRTIDFRRVYDATL*
Ga0137384_104518092	3300012357	Vadose Zone Soil	ALVLYGDGRKLKQSVEGGGDVEIKAHWQGNDFVVERKVSSGGKVTEDYLRSQDGKQLYVIVSFDGGRGRTIDFRRVYDATL*
Ga0137385_102189011	3300012359	Vadose Zone Soil	SSVAVRSDSGAALVLYNDGQKVTQKVEGRGDVDINGRWLGTDFVVERKVSRGGKVTEDYLRTQDGKQLFVIVKFEGGRGRSIEFRRVYDGAASQ*
Ga0134047_10680311	3300012380	Grasslands Soil	VLVEGGGDVEIKGRWQGNDFVVERKVSGDGKVTEDYLRSQDGTQLYVIVKFEGGRGRSIEFRRVYD
Ga0137395_104626411	3300012917	Vadose Zone Soil	DSGAALLLYSDGRKVTQKVEGGGDVEIKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVNFAGGRGRALEFRRVYDGAAAQ*
Ga0137395_109785261	3300012917	Vadose Zone Soil	VDTLTVGSNGRKLKQKVDGGGDIETKAHWRGRAFVVQRAVSGGGKVTEDYLRSQDGKQLYVIVGFTGLRGRSIQFRRVYDNAPTP*
Ga0137359_115133151	3300012923	Vadose Zone Soil	SVAVGSDSGAALVLYNDGRKVTQKVEGGGDVEIKGRWLGNDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVKFEGGRGRSIEFRRVYDGAGAK*
Ga0137419_104496561	3300012925	Vadose Zone Soil	VTRKVEGSGDVEIKGRWQGNDFVVERKVSGGGKITEDYLRSQDGKQLYVIVNVEGGRGRAIEFRRVYDGAVAR*
Ga0134077_100834982	3300012972	Grasslands Soil	ATRDGDGDVEIKGRWQGNDFTVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSIEFRRVYDGAAAM*
Ga0134077_104663122	3300012972	Grasslands Soil	GAALVIYGDGRKLKQSVEGGGDVEIKGHWQGNDFVVERKVSGGGKVSEDYLRAQDGTQLYVIVSFDGGRGRTIEFRRVYDRAASGAPAP*
Ga0134075_101217302	3300014154	Grasslands Soil	AALVLYADGRKLKQTVEGGGDVEIKGRWQGNDFIVERKVSGGGKVTEDYLRSQDGTQLFVIVSFEGGRGRSIEFRRVYDAAGS*
Ga0137411_12076141	3300015052	Vadose Zone Soil	YSTDSDGRKVTQKVEGGGDVEIKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVNFEGGRGRAIEFRRVYDGATAQ*
Ga0134073_100215012	3300015356	Grasslands Soil	DSGAALVLYGDGRKLKQSVDGGGDVEIKAHWQGNDFVVERRVSGGGKVTEDYLRSQDGKQLYVIVSFDGGRGRSIDFRRVYDTAATALQPQ*
Ga0134072_101534022	3300015357	Grasslands Soil	ADTGAAVTLYGDGRKLKQTVGSGAGDIEVDLKARWQGNDFVVERKVSGGGKVTEDYLRSRDGKQLFVIVSLDNGRGRSIEFRRVYDAVTS*
Ga0134069_10013194	3300017654	Grasslands Soil	CDGRKLKQSVEGGGDVEIKGHWQGNDFVVERKVSGGGKVSEDYLRSQDGTQLYVIVSSDGGRGRTIEFRRVYDRAASGAPAP
Ga0134112_102150272	3300017656	Grasslands Soil	YGDGRKLKQSVDGGGDVEIKAHWQGNDFVVERRVSGGGKVTEDYLRSQDGKQLYVIVSFDGGRGRSIDFRRVYDTAATALQPQ
Ga0134112_104151911	3300017656	Grasslands Soil	IVETDSSVAFALDSGAALVLHSDGRKVTQKVEGGGDVETKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSFEGRSGRSIAFRRVYDGAAVK
Ga0134083_105466281	3300017659	Grasslands Soil	QQADSAMTLTGEDGQPLVLYADGRKLVQKVDGGGDLETKAHWQGNDFVVERRVKGGGKVTEDYLRSQDGKQLFVIVGFEGWGGRSIQFRRVYDRRADRG
Ga0187779_100306041	3300017959	Tropical Peatland	MQLVFNAPKAFNLTETDSTITFASDSADTLVVFGDGRKVTQKVQDAADVTVTARWQGTDLIVERKVSGGGSVTEDYLRSQDGKQLYVIVSFVTPRGRSIEFRRIYDHG
Ga0187777_101204513	3300017974	Tropical Peatland	NGKKVVMRSDSLADVEVRGKWQGNDFVVRRKVSGGGTITEDYLHSPSGNQLFVIVSFDTPSGRSVQFRRVYDGS
Ga0066655_111998662	3300018431	Grasslands Soil	VLAEGGGDVEIKGRWQGNDFVVERKVSGDGKVTEDYLRSQDGTQLYVIVKFEGGRGRSIEFRRVYDGAAAM
Ga0066667_118072562	3300018433	Grasslands Soil	LYGDGRKLKQSVEGGGDVEIKAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSVDGGRGRTSDFRRVYDAAASTPQPQ
Ga0066669_119065372	3300018482	Grasslands Soil	TLTGEDGQPLLLYADGRKLVQKVDGGGDLEIKAHWQGNDFVVERRVKGGGKVTEDYLRSQDGKQLFVIVGFEGSGGRSIQFRRVYDPAS
Ga0066669_122609522	3300018482	Grasslands Soil	DSGAALVLYGDGRKLKQSVDGGGDVEIKAHWQGNDFVVERRVSGGGKVTEDYLRSQDGKQLYVIVSFDGGRGRSIDFRRVYDTAATALQPQ
Ga0066669_122609542	3300018482	Grasslands Soil	DSGAALVLYGDGRKLKQSVDGGGDVEIKAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSFDGGRGRSIDFRRVYDTAATAPQPQ
Ga0184643_13938382	3300019255	Groundwater Sediment	VSTRWLGQEEETFSQKVDGGGDVEITGRWQGNDFVVERKVSGGGKVTEDYLRSEDGKQLFVIVKSEGRRGRSIEFRRMYDRAPTTQ
Ga0193715_10509482	3300019878	Soil	VDGGGDVEITGRWQGNGFVVERKVSGGGKVTEDYLRSQDGKQLFVIVKSEGRRGRSIEFRRMYDRAPTTQ
Ga0193734_10080742	3300020015	Soil	SGRKVRREPTVQGEGAVDIKGHWQGNDFVVERSVSGGGKVTEDYLRSTDGKQLFVLVTFEAGRREVTFRRIYDSR
Ga0210382_104343312	3300021080	Groundwater Sediment	VDGGGDVEITGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVKSEGRRGRSIEFRRMYDRAPTTQ
Ga0179596_101839022	3300021086	Vadose Zone Soil	ETDSSVAFAADSGAALLLYSDGRKVTQKVEGGGDVEIKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVNFEGGRGRALEFQRVYDGAAAQ
Ga0207699_108885801	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VISETDSSLGFTPDSGAALVLYADGRKLKQTVEGGGDVEIKARWQGNDFVVERKVSGGGKVTEDYLRSRDGKQLFVIVALDNVRGRSVEFRRVYDAVPS
Ga0209235_11382041	3300026296	Grasslands Soil	VEIKGHWQGNDFVVERKVSGGGKVTEDYLRSEDGKHLFVILKSEGGRGRSIEFRRVYDGAATK
Ga0209235_11635051	3300026296	Grasslands Soil	LVLHDDGRKVTQIVDGGGDVEIKGHWQGSDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSIEFRRVYDGAAAK
Ga0209235_11840422	3300026296	Grasslands Soil	AFASDSGAALVLYSDGRKVTQKVEGGGDVEIKGRWLGNDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVKFEGGRGRSIEFRRVYDGAAAK
Ga0209055_10907991	3300026309	Soil	SGAALVLYNDGRKVTQKVERGGDVEIKGRWLGNDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVKFEGGRGRSIEFRRVYDGAAGQ
Ga0209239_11472451	3300026310	Grasslands Soil	KLKQQVDGGGDVQIKAHWQGNDFVVERKVSRGGKVTEDYLRSQDGKQLYVIVSFDGGRGRTIDFRRVYDAAASAPQTQ
Ga0209239_12281171	3300026310	Grasslands Soil	QSAEGSGDVEIKAHWQGNDFVVERKVSGGGKVTENYMRSQDGKQLYVIVSFDGGRGRTIDFRRVYDAAL
Ga0209761_13148491	3300026313	Grasslands Soil	DVEIKGHWQGNDFVVERKISGGGKVTEDYLRSEDGKHLFVIVKSDGGRGRSIEFRRVYDGAATQ
Ga0209268_10027501	3300026314	Soil	QIVDGGGDIEIKGHWQGSDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSLEFRRVYDGVAVK
Ga0209268_11369922	3300026314	Soil	LVLYGDGRKLKQSVEGGGDVEIKAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSVDGGRGRTSDFRRVYDAAASTPQPQ
Ga0209471_11284962	3300026318	Soil	QSDSTMAFTADTGAAVVLYGDGRKLKQPVDGGGDVEINAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVSFDNGRGRSVEFRRVYDAVTS
Ga0209471_13033042	3300026318	Soil	GDGRKLKQSVEGGGDVEIKAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSFDGGRGRTIDFRRVYDAAL
Ga0209687_12219041	3300026322	Soil	VSVTPDSGAVVDFYADGRKVKPTAEGGGDIEIKAHWQGNDFVVERKVSGGGKVTEDYLKSQDGKQLFVIVSLDRGRGRSVEFRRVYDAVTS
Ga0209470_10039951	3300026324	Soil	ASDSTLTFKSDSGAALVLYGDGRKLKQSVDGGGDVEIKAHWQGNDFVVERRVSGGGKVTEDYLRSQDGKQLYVIVSFDGGRGRSIDFRRVYDTAATALQPQ
Ga0209802_10244201	3300026328	Soil	QTVDGGGDVEIKARWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVSLDNGRGRSIEFRRVYDAVAS
Ga0209473_10072771	3300026330	Soil	LYNDGRKVTQKVEGGGDIEIKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSIEFRRVYDGAAAM
Ga0209158_10098624	3300026333	Soil	VTQKVEGGGDVQITGHWQGNDFVVERKVSGGGKVTEDYLRSQDGKHLVVIVKSEGGRGRSIEFRRVYDGAVAN
Ga0209158_13608522	3300026333	Soil	TLTFTSDSGSALVLYGDGRKFKQSVEGGGDIEIKARWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVSVDPGRGRTIDFRRVYDPAATAPQSQ
Ga0209378_10192724	3300026528	Soil	VDLYADGRKVKQTVEGGGDIEIKAHWQGNDFVVERKVSAGGKVTEDYLKSQDGKQLFVIVSLDTGRGRSIEFRRVYDAVAS
Ga0209378_10453711	3300026528	Soil	VAVRSDTGAALVLYNDGRKVTQKVEGGGDIEIKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVKFEGGRGRSIEFRRVYDGAAAM
Ga0209157_11932712	3300026537	Soil	SDSGAALVLYGDGRKLKQSVDGGGDVEIKAHWQGNDFVVERRVSGGGKVTEDYLRSQDGKQLYVIVSFDGGRGRSIDFRRVYDTAATALQPQ
Ga0209056_102615822	3300026538	Soil	GAALVLYGDGRKLKQSVEGGGDVEIKAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSFDGGRGRTIDFRRVYDAAL
Ga0209376_10953921	3300026540	Soil	VGSGAGDIEVDLKARWQGNDFVVERKVSGGGKVTEDYLRSRDGKQLFVIVSLDNGRGRSIEFRRVYDAVTS
Ga0209156_1000247910	3300026547	Soil	IMASDSALTFTSDTGAALVLYGDGRKLKQSVEGGGDVEIKAHWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVSVDGGRGRTSDFRRVYDAAASTPQPQ
Ga0179587_106749052	3300026557	Vadose Zone Soil	DGRKVRREAKVEGEGAVDIKGRWQGNDLVVERSVSGGGKVSEDYMRSSDGKQLYVIVSFDGGRGRSITFRRIYDPQN
Ga0179587_109631291	3300026557	Vadose Zone Soil	GGDVETKGRWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLYVIVGFEGRRGRSIEFRRVYDGAASAH
Ga0208995_10162282	3300027388	Forest Soil	FSDGRKVTQKVEGGGDVEIKGRWLGNDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVKFEGGRGRSIEFRRVYDGAAAK
Ga0208995_10185473	3300027388	Forest Soil	YSDGRKVTQRVDGGGDVEIKGHWQGNDFVVERTVSGGGKVVEDYLRSQDGKQLYVIVRFEGGGGRSIEFRRVYDGEGAK
Ga0209689_11677722	3300027748	Soil	VTFASDSGGALELYGDGRKVTQKVEGAGDVEIKGHWQGNDFVVERKVSGGGKVTEDYLRSEDGKHLFVIVKSEGGRGRSIEFRRVYDGAATK
Ga0307310_101442642	3300028824	Soil	KLKQKVDAGGDIEIRARWQGNDLVVDRAVAGGGKVVEDYLRSQDGKQLYVIVSFTGMRGRSIQFRRIYDPAP
Ga0307501_100149893	3300031152	Soil	RSTSAASRSYMAHECTRHFSDGRKVTQPVEGGGDVEIKGHWQGNDFVVERKVSGGGKVVEDYLRAQDGKQLYVIVKSEGGRGRSIEFRRVYDGAAAQ
Ga0307469_118558161	3300031720	Hardwood Forest Soil	FASDSGGALELYGDGRKVTQKVEGAGDVEIKGHWQGNDFVVERKVSGGGKVTEDYLRSQDGKHLFVIVKSEGGRGRSIEFRRVYDGAATK
Ga0307469_124729202	3300031720	Hardwood Forest Soil	KVEGGGDVEIRGHWQGNDFVVERKVSGGGKVIEDYLRSDDGKHLFVIVKSEGGRGRAIEFRRVYDGAATK
Ga0307479_117648632	3300031962	Hardwood Forest Soil	KLKQTADGGGAVEIKARWQGNDFVVERKVSGGGKVTEDYLRSQDGKQLFVIVSLDNGRGRSIEFRRVYDAVAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067606

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences