Metagenome / Metatranscriptome Family F067734

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Overview

Basic Information
Family ID	F067734
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	50 residues
Representative Sequence	MANTDKLLLICIIGMIIGFIIVIIDVQKTSYKKGVRDGYHRGRSIKGQE
Number of Associated Samples	83
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	79.20 %
% of genes near scaffold ends (potentially truncated)	23.20 %
% of genes from short scaffolds (< 2000 bps)	72.00 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Duplodnaviria (69.600 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater (28.000 % of family members)
Environment Ontology (ENVO)	Unclassified (44.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (42.400 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.25% β-sheet: 0.00% Coil/Unstructured: 46.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF01844	HNH	3.20
PF05869	Dam	2.40
PF09250	Prim-Pol	1.60
PF05065	Phage_capsid	1.60
PF04860	Phage_portal	1.60
PF12850	Metallophos_2	0.80
PF16778	Phage_tail_APC	0.80
PF02018	CBM_4_9	0.80
PF13385	Laminin_G_3	0.80
PF04586	Peptidase_S78	0.80
PF14279	HNH_5	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	Mobilome: prophages, transposons [X]	1.60
COG3740	Phage head maturation protease	Mobilome: prophages, transposons [X]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.40 %
Unclassified	root	N/A	1.60 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	84.80 %
cellular organisms	root	All Organisms → cellular organisms	13.60 %
Unclassified	root	N/A	1.60 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	69.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.20 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.60 %
Unclassified	root	N/A	1.60 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	69.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	8.00 %
Unclassified	root	N/A	1.60 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	69.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.20 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8.00 %
Unclassified	root	N/A	1.60 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	69.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.20 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.20 %
Unclassified	root	N/A	1.60 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	69.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.20 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	6.40 %
Unclassified	root	N/A	1.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	69.60 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	15.20 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	6.40 %
Unclassified	root	N/A	1.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352004\|2199905357	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14006	Open in IMG/M
3300002408\|B570J29032_109255536	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	657	Open in IMG/M
3300002408\|B570J29032_109330258	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	695	Open in IMG/M
3300002447\|JGI24768J34885_10014381	All Organisms → Viruses → Predicted Viral	2615	Open in IMG/M
3300002447\|JGI24768J34885_10118409	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	893	Open in IMG/M
3300002835\|B570J40625_100817093	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	817	Open in IMG/M
3300004112\|Ga0065166_10109580	All Organisms → Viruses → Predicted Viral	1014	Open in IMG/M
3300004154\|Ga0066603_10403804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	638	Open in IMG/M
3300004481\|Ga0069718_15844300	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	803	Open in IMG/M
3300004481\|Ga0069718_15844409	All Organisms → cellular organisms → Bacteria	2021	Open in IMG/M
3300004481\|Ga0069718_16087611	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	858	Open in IMG/M
3300005527\|Ga0068876_10039745	All Organisms → cellular organisms → Bacteria	2904	Open in IMG/M
3300005527\|Ga0068876_10234401	All Organisms → cellular organisms → Bacteria	1057	Open in IMG/M
3300005527\|Ga0068876_10522829	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	650	Open in IMG/M
3300005528\|Ga0068872_10724911	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	521	Open in IMG/M
3300006030\|Ga0075470_10002006	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6349	Open in IMG/M
3300006484\|Ga0070744_10074336	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	986	Open in IMG/M
3300006484\|Ga0070744_10110719	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	793	Open in IMG/M
3300006639\|Ga0079301_1110834	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300006802\|Ga0070749_10109130	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1631	Open in IMG/M
3300006802\|Ga0070749_10606921	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	590	Open in IMG/M
3300006805\|Ga0075464_10225630	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1117	Open in IMG/M
3300006805\|Ga0075464_10319359	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	936	Open in IMG/M
3300006920\|Ga0070748_1088787	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300006920\|Ga0070748_1194611	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	742	Open in IMG/M
3300006920\|Ga0070748_1280910	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	594	Open in IMG/M
3300007162\|Ga0079300_10099477	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	836	Open in IMG/M
3300007363\|Ga0075458_10048242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1341	Open in IMG/M
3300007363\|Ga0075458_10245534	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	546	Open in IMG/M
3300007735\|Ga0104988_10316	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	13412	Open in IMG/M
3300008055\|Ga0108970_10473630	All Organisms → Viruses → Predicted Viral	1854	Open in IMG/M
3300008055\|Ga0108970_11516351	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	801	Open in IMG/M
3300008107\|Ga0114340_1043037	All Organisms → Viruses → Predicted Viral	2010	Open in IMG/M
3300008261\|Ga0114336_1028190	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3149	Open in IMG/M
3300008266\|Ga0114363_1002710	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	15230	Open in IMG/M
3300008266\|Ga0114363_1248914	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	501	Open in IMG/M
3300009009\|Ga0105105_10330026	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	832	Open in IMG/M
3300009009\|Ga0105105_10916472	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	538	Open in IMG/M
3300009037\|Ga0105093_10383580	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	764	Open in IMG/M
3300009037\|Ga0105093_10411423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	739	Open in IMG/M
3300009037\|Ga0105093_10531896	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	658	Open in IMG/M
3300009081\|Ga0105098_10051078	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1686	Open in IMG/M
3300009081\|Ga0105098_10206297	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	910	Open in IMG/M
3300009081\|Ga0105098_10784900	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	513	Open in IMG/M
3300009082\|Ga0105099_10320803	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	911	Open in IMG/M
3300009082\|Ga0105099_10883509	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	563	Open in IMG/M
3300009085\|Ga0105103_10696206	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	584	Open in IMG/M
3300009165\|Ga0105102_10614404	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	602	Open in IMG/M
3300009169\|Ga0105097_10057199	All Organisms → Viruses → Predicted Viral	2106	Open in IMG/M
3300009169\|Ga0105097_10138007	All Organisms → Viruses → Predicted Viral	1339	Open in IMG/M
3300009169\|Ga0105097_10326886	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	849	Open in IMG/M
3300009169\|Ga0105097_10395760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	767	Open in IMG/M
3300009169\|Ga0105097_10467121	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	704	Open in IMG/M
3300009169\|Ga0105097_10491125	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	686	Open in IMG/M
3300010354\|Ga0129333_10243366	All Organisms → Viruses → Predicted Viral	1624	Open in IMG/M
3300010354\|Ga0129333_11229416	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	621	Open in IMG/M
3300010354\|Ga0129333_11337806	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	591	Open in IMG/M
3300010368\|Ga0129324_10413518	Not Available	520	Open in IMG/M
3300011009\|Ga0129318_10213505	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	621	Open in IMG/M
3300011334\|Ga0153697_1279	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	17083	Open in IMG/M
3300011336\|Ga0153703_1454	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	14060	Open in IMG/M
3300011338\|Ga0153699_1222	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	23967	Open in IMG/M
3300011339\|Ga0153700_10768	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	15341	Open in IMG/M
3300012352\|Ga0157138_1001153	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4833	Open in IMG/M
3300012352\|Ga0157138_1034969	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	797	Open in IMG/M
3300012706\|Ga0157627_1083694	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	958	Open in IMG/M
3300012708\|Ga0157595_1071457	All Organisms → Viruses → Predicted Viral	1645	Open in IMG/M
3300012715\|Ga0157599_1004978	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	652	Open in IMG/M
3300012720\|Ga0157613_1054010	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	501	Open in IMG/M
3300012725\|Ga0157610_1266497	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	707	Open in IMG/M
3300012729\|Ga0157625_1265157	All Organisms → Viruses → Predicted Viral	1202	Open in IMG/M
3300012759\|Ga0157626_1136173	All Organisms → Viruses → Predicted Viral	1061	Open in IMG/M
3300012764\|Ga0157624_1120102	All Organisms → Viruses → Predicted Viral	1060	Open in IMG/M
3300013004\|Ga0164293_10062892	All Organisms → cellular organisms → Bacteria	2945	Open in IMG/M
3300013004\|Ga0164293_10121194	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1980	Open in IMG/M
3300013004\|Ga0164293_10373081	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	968	Open in IMG/M
3300013004\|Ga0164293_10570810	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	738	Open in IMG/M
3300013005\|Ga0164292_10573225	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	732	Open in IMG/M
3300013005\|Ga0164292_10578429	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	728	Open in IMG/M
3300013074\|Ga0157618_1089634	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	619	Open in IMG/M
3300014050\|Ga0119952_1128658	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	563	Open in IMG/M
3300016686\|Ga0180056_1067952	All Organisms → Viruses → Predicted Viral	1282	Open in IMG/M
3300016695\|Ga0180059_1120618	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	948	Open in IMG/M
3300016697\|Ga0180057_1163917	All Organisms → Viruses → Predicted Viral	1177	Open in IMG/M
3300016699\|Ga0180058_1124661	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	581	Open in IMG/M
3300017754\|Ga0181344_1000453	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	16424	Open in IMG/M
3300017780\|Ga0181346_1085923	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1235	Open in IMG/M
3300020498\|Ga0208050_1005368	All Organisms → Viruses → Predicted Viral	1565	Open in IMG/M
3300020498\|Ga0208050_1023916	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	623	Open in IMG/M
3300020536\|Ga0207939_1002526	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3916	Open in IMG/M
3300020539\|Ga0207941_1003046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3530	Open in IMG/M
3300025585\|Ga0208546_1001904	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6392	Open in IMG/M
3300025635\|Ga0208147_1005063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3847	Open in IMG/M
3300025635\|Ga0208147_1114119	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	648	Open in IMG/M
3300025896\|Ga0208916_10332142	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	663	Open in IMG/M
3300025896\|Ga0208916_10417250	Not Available	585	Open in IMG/M
3300027721\|Ga0209492_1023866	All Organisms → Viruses → Predicted Viral	2109	Open in IMG/M
3300027721\|Ga0209492_1085157	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1115	Open in IMG/M
3300027726\|Ga0209285_10166457	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	686	Open in IMG/M
3300027762\|Ga0209288_10031227	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1556	Open in IMG/M
3300027792\|Ga0209287_10362180	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	557	Open in IMG/M
3300027816\|Ga0209990_10010495	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5758	Open in IMG/M
3300027836\|Ga0209230_10002931	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	7096	Open in IMG/M
3300027836\|Ga0209230_10573427	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	634	Open in IMG/M
3300029349\|Ga0238435_101480	All Organisms → Viruses → Predicted Viral	4254	Open in IMG/M
3300029349\|Ga0238435_106005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1292	Open in IMG/M
3300031787\|Ga0315900_10113539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2599	Open in IMG/M
3300031951\|Ga0315904_10101105	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3031	Open in IMG/M
3300031963\|Ga0315901_10381868	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1136	Open in IMG/M
3300033981\|Ga0334982_0049037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2342	Open in IMG/M
3300033995\|Ga0335003_0005471	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6454	Open in IMG/M
3300033996\|Ga0334979_0003302	All Organisms → cellular organisms → Bacteria	11550	Open in IMG/M
3300033996\|Ga0334979_0081386	All Organisms → Viruses → Predicted Viral	2045	Open in IMG/M
3300033996\|Ga0334979_0148525	All Organisms → Viruses → Predicted Viral	1419	Open in IMG/M
3300034012\|Ga0334986_0450189	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	643	Open in IMG/M
3300034061\|Ga0334987_0796077	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	527	Open in IMG/M
3300034101\|Ga0335027_0006389	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	10341	Open in IMG/M
3300034104\|Ga0335031_0005187	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9737	Open in IMG/M
3300034104\|Ga0335031_0019754	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4947	Open in IMG/M
3300034111\|Ga0335063_0033667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3280	Open in IMG/M
3300034111\|Ga0335063_0114931	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1607	Open in IMG/M
3300034119\|Ga0335054_0107249	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1719	Open in IMG/M
3300034200\|Ga0335065_0651341	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	608	Open in IMG/M
3300034283\|Ga0335007_0151107	All Organisms → Viruses → Predicted Viral	1662	Open in IMG/M
3300034357\|Ga0335064_0131502	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1536	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.40%
Host-Associated	Host-Associated	1.60%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	96.80%
Terrestrial	Environmental → Terrestrial	1.60%
Plants	Host-Associated → Plants	1.60%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	79.20%
Marine	Environmental → Aquatic → Marine	17.60%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.60%
Leaf	Host-Associated → Plants → Leaf	1.60%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	34.40%
Sediment	Environmental → Aquatic → Freshwater → Sediment	20.80%
Lentic	Environmental → Aquatic → Freshwater → Lentic	16.00%
Coastal	Environmental → Aquatic → Marine → Coastal	16.00%
Lotic	Environmental → Aquatic → Freshwater → Lotic	4.80%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.60%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	1.60%
Pond	Environmental → Aquatic → Freshwater → Pond	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	34.40%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	20.80%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	16.00%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	12.00%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	4.80%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	4.00%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.60%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	1.60%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.80%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	28.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	18.40%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	12.00%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	6.40%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	4.80%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	4.00%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	4.00%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	3.20%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	3.20%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	3.20%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	2.40%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.40%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	2.40%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	1.60%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.60%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	1.60%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352004	Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnion	Environmental	Open in IMG/M
3300002408	Freshwater microbial communities from Lake Mendota, WI, sample - 15JUL2010 deep hole epilimnion (Lake Mendota Combined assembly, ASSEMBLY_DATE=20140123)	Environmental	Open in IMG/M
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300002835	Freshwater microbial communities from Lake Mendota, WI - (Lake Mendota Combined Ray assembly, ASSEMBLY_DATE=20140605)	Environmental	Open in IMG/M
3300004112	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)	Environmental	Open in IMG/M
3300004154	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 8	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental	Open in IMG/M
3300006484	Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535	Environmental	Open in IMG/M
3300006639	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series FC 2014_7_11	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007162	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Utica-2 Time Series HT 2014_7_11	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M
3300007735	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea ? 2014Oct	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008107	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300011334	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Daesung	Environmental	Open in IMG/M
3300011336	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Paldang	Environmental	Open in IMG/M
3300011338	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Haengju	Environmental	Open in IMG/M
3300011339	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Hannam	Environmental	Open in IMG/M
3300012352	Freshwater microbial communities from Baxter Creek, Ontario, Canada - S37	Environmental	Open in IMG/M
3300012706	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES159 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012708	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES113 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012715	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES122 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012720	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES141 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012725	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES137 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012729	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES157 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012759	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES158 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012764	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES155 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300013074	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES147 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300014050	Freshwater microbial communities from Lake Lanier in Georgia, USA - LL_1007B	Environmental	Open in IMG/M
3300016686	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES143 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016695	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES164 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016697	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES156 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016699	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES160 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300020498	Freshwater microbial communities from Lake Mendota, WI - 13JUN2010 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020536	Freshwater microbial communities from Lake Mendota, WI - 02JUN2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300020539	Freshwater microbial communities from Lake Mendota, WI - 13SEP2012 deep hole epilimnion (SPAdes)	Environmental	Open in IMG/M
3300025585	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025635	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027726	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027762	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027792	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300029349	Freshwater microbial communities from Iron Gate Dam, Klamath Basin, California, USA - IR103	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300031963	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033995	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23May2014-rr0056	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034111	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M
3300034200	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Jul2013-rr0190	Environmental	Open in IMG/M
3300034283	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2003-rr0061	Environmental	Open in IMG/M
3300034357	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME12May2017-rr0187	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2200084126	2199352004	Freshwater	MANTDKLLLICMLGMIIGFIMITIDVQRRSYEKGVRDGYHRGRSIKGEE
B570J29032_1092555362	3300002408	Freshwater	MANTDKLLLICIIGMIIGFVIVIIDVQKTSYKRGVRDGYHRGRSYKGQE*
B570J29032_1093302582	3300002408	Freshwater	MSNTDKLLLICIIGMLFGFGVALYDVSKRSYEKGLREGYHRGRSIKGQE*
JGI24768J34885_100143813	3300002447	Freshwater And Sediment	MSSLDKLFVISLVGIFIGFALVLLDVQKTAYNKGVRDGYHRGRSYKGQE*
JGI24768J34885_101184091	3300002447	Freshwater And Sediment	MSSLDKLFVISLVGIFIGFALVLLDVQKTAYNKGVRDGYHRGRSYKGQE*KPVK
B570J40625_1008170933	3300002835	Freshwater	MANTDKLLLICIIGMIIGFIIVIIDVQKTAYNKGVRDGYHRGRSIKGQE*
Ga0065166_101095803	3300004112	Freshwater Lake	MENTDKLLLICMLGMIIGFILIAIDVQRTSYKKGVRDGYHRGRSVKGQE*
Ga0066603_104038042	3300004154	Freshwater	MSNLDKLFIISIIGVFIGFAIVILDVQKTAYKKGVRDGYHRGRSYKGQE*
Ga0069718_158443002	3300004481	Sediment	MTNTDKLLLICMLGMIIGFIMVTIDVQKRSYEKGVRDGYHRGRSYKGQE*
Ga0069718_158444093	3300004481	Sediment	MSSLDKLFIISLIGMCIGFALIIIDVQRTSYNKGVRDGYHRGRTYKGQE*
Ga0069718_160876113	3300004481	Sediment	MSNNDKLLMICIIGMWIGFTMVIIDVRRTAYQKGLREGWHRGRSVSRQEFWEE*
Ga0068876_100397456	3300005527	Freshwater Lake	MANTDKLLLICIFGMIIGFIIVIIDVQKTAYKKGVRDGYHRGRSYKGQE*
Ga0068876_102344012	3300005527	Freshwater Lake	MANTDKLLLICIIGMIIGFIVVIVDVQKTAYKKGVRDGYHRGRSIKGQE*
Ga0068876_105228292	3300005527	Freshwater Lake	MSNTDKLLLICIIGMLIGFAITVFDVQRRSYEKGVRDGYHRGRSFKGQE*
Ga0068872_107249112	3300005528	Freshwater Lake	MSNTDKLLLICIIGMLIGFAITIFDVQRRSYDKGVRDGYHRGRSIKGQE*
Ga0075470_100020067	3300006030	Aqueous	MANTDKLLLICIFGMIIGFVIVIIDVQKTAYKKGVRDGYHRGRSYKGQE*
Ga0070744_100743362	3300006484	Estuarine	MANTDKLLLICMLGMIIGFIIVIIDVQKTAYKKGVRDGYHRGRSIKGQE*
Ga0070744_101107191	3300006484	Estuarine	MANTDKLLLICIIGMIIGFIIVIIDVQKTSYKRGVRDGYHRGRSYKGQE*
Ga0079301_11108343	3300006639	Deep Subsurface	MSNTDKLLLICIIGMVIGFAITIFDVQRRSYDKGVRDGYHRGRSVKGQE*
Ga0070749_101091303	3300006802	Aqueous	MSSLDKLFIISLIGMCIGFALIIIDVQRTSYNKGVRDGYHRGRSYKGQE*
Ga0070749_106069211	3300006802	Aqueous	NKGFGAVRYKMSNTDKLLLICIIGMVIGFAITIFDVQRRSYDKGVRDGYHRGRSIKGQE*
Ga0075464_102256303	3300006805	Aqueous	MSSLDKLFIISLVGIFIGFALVLLDVQKTAYNKGVRDGYHRGRSYKGQE*
Ga0075464_103193593	3300006805	Aqueous	MANTDKLLLICIFGMIVGFIIVIIDVQKTAYKKGVRDGYHRGRSYKGQE*
Ga0070748_10887873	3300006920	Aqueous	MSSLDKLFIISLIGMCIGFALIIIDVQRTSYNKGVRDGYHRGRAYKGEE*
Ga0070748_11946113	3300006920	Aqueous	MANTDKLLLICIIFMIVGFSVAIFDVQRRSYDKGVRDGYHRGRSIKGQE*
Ga0070748_12809102	3300006920	Aqueous	MANTDKLLLICIIGMIIGFIIVIIDVQKTAYKKGVRDGYHRGRSYKGQE*
Ga0079300_100994773	3300007162	Deep Subsurface	MSNTDKLLLICIILMIVGFSVAIFDVQRRSYDKGVRDGYHRGRSYKGQE*
Ga0075458_100482423	3300007363	Aqueous	MSNTDKLLLICIIGMCIGFAITVFDVQRRSYEKGVRDGYHRGRSYKGQE*
Ga0075458_102455342	3300007363	Aqueous	MANTDKLLLICIILMIVGFSVAIFDVQRRSYDKGVRDGYHRGRSIKGQE*
Ga0104988_1031618	3300007735	Freshwater	MSSLDKLFIISLVGIAIGFGLVLLDVQKTAYNKGVRDGYHRGRSIKGKE*
Ga0108970_104736303	3300008055	Estuary	MANTDKLLLICMLGMIIGFIMITIDVQKRSYDKGVRDGYHRGRSIKGQE*
Ga0108970_115163511	3300008055	Estuary	MSSLDKLFIISLVGIAIGFGLVLLDVQKTAYNKGVRDGYHRGRSYKGQE*
Ga0114340_10430372	3300008107	Freshwater, Plankton	MSNTDKLLLICIIGMIAGFIVVIIDVQKTAYNKGVRDGYHRGRSYKGQE*
Ga0114336_10281905	3300008261	Freshwater, Plankton	MSNTDKLLLICIIGMIAGFIVVIIDVQKTAYKKGVRDGYHRGRSYKGQE*
Ga0114363_100271021	3300008266	Freshwater, Plankton	MSNLDKLLLICIIGMVIGFAITIFDVQRRSYDKGLRDGWHRGRNFRGDLD*
Ga0114363_12489141	3300008266	Freshwater, Plankton	MANTDKLLLICMLGMIIGFIMITIDVQRRSYEKGVRDGYHRGRSIKGEE*
Ga0105105_103300262	3300009009	Freshwater Sediment	MDNTDKLLLICMLGMIVGFILITMDVQRTAYKKGVRDGYHRGRNYKGQE*
Ga0105105_109164721	3300009009	Freshwater Sediment	ICMLGMIIGFILITIDVQRSSYKKGVRDGYHRGRSVKGQE*
Ga0105093_103835802	3300009037	Freshwater Sediment	MDNTDKLLLICMLGMIVGFIIITIDVQRTAYKKGVRDGYHRGRTYKGQE*
Ga0105093_104114231	3300009037	Freshwater Sediment	IGTEMANTDKLLLICIIGMVIGFAITIFDVQRRSYDKGVRDGYHRGRSIKGQE*
Ga0105093_105318961	3300009037	Freshwater Sediment	KQSRALLQIGTRMENTDKLLLICMLGMIIGFILITIDVQRTSYKKGVRDGYHRGRSIKGQE*
Ga0105098_100510783	3300009081	Freshwater Sediment	MANTDKLLLICIIGMIIGFIIVIIDVQKTAYNKGLREGYHRGRSIKGQE*
Ga0105098_102062972	3300009081	Freshwater Sediment	MSNLDKLFIISIIGIFIGFAIVIFDVQRTAYDKGVRDGYHRGRSIKGQE*
Ga0105098_107849001	3300009081	Freshwater Sediment	MANTDKLLLICIIGMIIGFIIVIIDVQKTAYKKGVRDGYHRGRSIKGEE*
Ga0105099_103208032	3300009082	Freshwater Sediment	MANTDKLLLICMLGMIVGFILITIDVQRSSYKKGVRDGYHRGRNYKGQE*
Ga0105099_108835091	3300009082	Freshwater Sediment	MANTDKLLLICIFGMIVGFIIVIIDVQRTAYKKGVRD
Ga0105103_106962061	3300009085	Freshwater Sediment	MANTDKLLLICIIGMIIGFIIVIIDVQKTAYKKGVRDGYHRGRSIKGQE*
Ga0105102_106144042	3300009165	Freshwater Sediment	MANTDKLLLICMLGMIIGFIMITKDVQRRSYEKGVRDGYHRGRSIKGEE*
Ga0105097_100571993	3300009169	Freshwater Sediment	MSNTDKLLIICIFGMMVGFIMILIDVQRTGYQKGLREGYHRGRSVSRQEFWEE*
Ga0105097_101380072	3300009169	Freshwater Sediment	MSNTDKLLIICIIGMWIGFIMVIIDVRHSAYQRGQREGWHRGRSTSRQEFWEE*
Ga0105097_103268863	3300009169	Freshwater Sediment	MSNNDKLLMICIIGMWIGLTIVIIDVRRTAYQKGLREGWHRGRSVSRQEFWEE*
Ga0105097_103957601	3300009169	Freshwater Sediment	DKLLLICIIGMIIGFIIVIIDVQKTSYKRGVRDGYHRGRSYKGQE*
Ga0105097_104671212	3300009169	Freshwater Sediment	MANTDKLLLICILGMIVGFAIIIIDVQKSAYKKGVRDGYHRGRSIKGQE*
Ga0105097_104911254	3300009169	Freshwater Sediment	LICIIGMIIGFIIVIIDVQKTSYKRGVRDGYHRGRSYKGQE*
Ga0129333_102433665	3300010354	Freshwater To Marine Saline Gradient	VRETPDQIGLRMANTDKLLLICIILMIVGFSVAIFDVQRRSYDKGVRDGYHRGRSIKGQE
Ga0129333_112294161	3300010354	Freshwater To Marine Saline Gradient	MANTDKLLLICIALMVIGFAVALFDVQKRSYDKGVRDGYHRGRSFKGQE*
Ga0129333_113378062	3300010354	Freshwater To Marine Saline Gradient	MSNTDKLLLICIIGMLIGFAITIFDVQRRSYDKGVRDGYHRGRSI
Ga0129324_104135181	3300010368	Freshwater To Marine Saline Gradient	MSSLDKLFIISLIGMCIGFALIIIDVQRTSYNKGVRDGYHRGRTYKGQV*
Ga0129318_102135053	3300011009	Freshwater To Marine Saline Gradient	LICIIGMLIGFAITIFDVQRRSYDKGVRDGYHRGRSVKGQE*
Ga0153697_12799	3300011334	Freshwater	MANTDKLLLICMLGMIIGFIMITIDVQKRSYEKGVRDGYHRGRNFRGDLD*
Ga0153703_145420	3300011336	Freshwater	MSNTDKLLIIAIIGMLIGFILVLLDVQRVAYQKGLREGWHRGRSTSRQEFWEE*
Ga0153699_122218	3300011338	Freshwater	MSNLDKLFIISIIGIFIGFAIVIFDVQRTAYDKGVRDGYHRGRSIKGEE*
Ga0153700_107688	3300011339	Freshwater	MSSLDKLFIISLVGIAIGFGLVLLDVQKTAYNKGVRDGYHRGRSIKGEE*
Ga0157138_100115310	3300012352	Freshwater	MNNTDKLLLICIILMIVGFSVAIFDVQRRSYDKGVRDGYHRGRSIKGQE*
Ga0157138_10349692	3300012352	Freshwater	MQGTQLMANTDKLLLICMLGMIVGFILITIDVQRSSYKKGVRDGYHRGRSVKGKE*
Ga0157627_10836943	3300012706	Freshwater	DKLLLICIIGMIIGFIIVIIDVQKTAYKKGVRDGYHRGRSYKGQE*
Ga0157595_10714575	3300012708	Freshwater	GIGAVRYKMSNTDKLLLICIIGMLIGFAITIFDVQRRSYDKGVRDGYHRGRSIKGQE*
Ga0157599_10049783	3300012715	Freshwater	VRYKMSNTDKLLLICIIGMLIGFAITIFDVQRRSYDKGVRDGYHRGRSIKGQE*
Ga0157613_10540101	3300012720	Freshwater	ALLQIGTEMANTDKLLLICIIGMIIGFVIVIIDVQKTSYKRGVRDGYHRGRSYKGQE*
Ga0157610_12664971	3300012725	Freshwater	EMANTDKLLLICIIGMIIGFIIVIIDVQKTAYKKGVRDGYHRGRSYKGQE*
Ga0157625_12651574	3300012729	Freshwater	LSPIKGIGAVRYKMSNTDKLLLICIIGMLIGFAITIFDVQRRSYDKGVRDGYHRGRSIKGQE*
Ga0157626_11361733	3300012759	Freshwater	LGLRMANTDKLLLICIFGMIIGFIIVIIDVQKTAYKKGVRDGYHRGRSYKGQE*
Ga0157624_11201021	3300012764	Freshwater	DSSVTLSLSPIKGIGAVRYKMSNTDKLLLICIIGMLIGFAITIFDVQRRSYDKGVRDGYHRGRSIKGQE*
Ga0164293_100628921	3300013004	Freshwater	MSNTDKLLLICIIGMVIGFAITIFDVQRRSYDKGLRDGYHRGRNFRGDLD*
Ga0164293_101211945	3300013004	Freshwater	MSNTDKLLLICIIGMIIGFIIVIIDVQKSAYKKGVRDGYHRGRSIKGQE*
Ga0164293_103730812	3300013004	Freshwater	MSNTDKLLLICIIGMLFGFGVALYDVSKRSYEKGLREGYHRGRRIKGQE*
Ga0164293_105708102	3300013004	Freshwater	LQLGNEMANTDKLLLICIIGMIIGFVIVIIDVQKTSYKRGVRDGYHRGRSYKGQE*
Ga0164292_105732252	3300013005	Freshwater	MSNTDKLLLICIIGMLFGFGVALYDVSKRSYEKGLREGYHRGRRIKGQ
Ga0164292_105784292	3300013005	Freshwater	MANTDKLLLICIVGMIVGFIIVIIDVQKTAYKKGVRDGYHRGRSYKGQE*
Ga0157618_10896343	3300013074	Freshwater	GAVRYKMSNTDKLLLICIIGMLIGFAITIFDVQRRSYDKGVRDGYHRGRSIKGQE*
Ga0119952_11286582	3300014050	Freshwater	MSNTDKLLLICIIGMLIGFAITVFDVQRRSYEKGVRDGYHRGRSIKGQE*
Ga0180056_10679521	3300016686	Freshwater	AVRYKMSNTDKLLLICIIGMLIGFAITIFDVQRRSYDKGVRDGYHRGRSIKGQE
Ga0180059_11206182	3300016695	Freshwater	MSNTDKLLLICIIGMLIGFAITIFDVQRRSYDKGVRDGYHRGRSIK
Ga0180057_11639171	3300016697	Freshwater	GIGAVRYKMSNTDKLLLICIIGMLIGFAITIFDVQRRSYDKGVRDGYHRGRSIKGQE
Ga0180058_11246611	3300016699	Freshwater	SVRYKMSNTDKLLLICIIGMLIGFAITIFDVQRRSYDKGVRDGYHRGRSIKGQE
Ga0181344_100045311	3300017754	Freshwater Lake	MENTDKLLLICMLGMIIGFILIAIDVQRTSYKKGVRDGYHRGRSVKGQE
Ga0181346_10859233	3300017780	Freshwater Lake	MANTDKLLLICIIGMIIGFAIVILDVQKTAYNKGVRDGYHRGRSYKGQE
Ga0208050_10053683	3300020498	Freshwater	MANTDKLLLICIIGMIIGFIIVIIDVQKTAYKKGVRDGYHRGRSIKGQE
Ga0208050_10239163	3300020498	Freshwater	MSNTDKLLLICIIGMIVGFIIVIIDVQKTAYKKGVRD
Ga0207939_100252610	3300020536	Freshwater	MTNTDKLLLICIIGMIIGFIIVIIDVQKTAYKKGVRDGYHRGRSYKGQE
Ga0207941_10030467	3300020539	Freshwater	MANTDKLLLICIIGMIIGFVIVIIDVQKTSYKRGVRDGYHRGRSYKGQE
Ga0208546_10019049	3300025585	Aqueous	MANTDKLLLICIFGMIIGFVIVIIDVQKTAYKKGVRDGYHRGRSYKGQE
Ga0208147_10050637	3300025635	Aqueous	MSNTDKLLLICIIGMLIGFAITIFDVQRRSYDKGVRDGYHRGRSIKGQE
Ga0208147_11141192	3300025635	Aqueous	MSNTDKLLLICIIGMCIGFAITVFDVQRRSYEKGVRDGYHRGRSYKGQE
Ga0208916_103321422	3300025896	Aqueous	VSNTDKLLLICIIGMVIGFAITIFDVQRRSYDKGVRDGYHRGRSIKGQE
Ga0208916_104172501	3300025896	Aqueous	MANTDKLLLICIFGMIVGFIIVIIDVQKTAYKKGVRDGYHRGRSYKGQEXEP
Ga0209492_10238665	3300027721	Freshwater Sediment	MSNTDKLLIICIFGMMVGFIMILIDVQRTGYQKGLREGYHRGRSVSRQEFWEE
Ga0209492_10851572	3300027721	Freshwater Sediment	MSNTDKLLIICIIGMWIGFIMVIIDVRHSAYQRGQREGWHRGRSTSRQEFWEE
Ga0209285_101664572	3300027726	Freshwater Sediment	MANTDKLLLICIIGMIVGFAIAIFDVQRRSYDKGVRDGYHRGRTYKGQE
Ga0209288_100312273	3300027762	Freshwater Sediment	MANTDKLLLICIIGMIVGFAIAIFDVQRRSYDKGVRDGYHRGRSIKGQE
Ga0209287_103621801	3300027792	Freshwater Sediment	MENTDKLLLICMLGMIIGFILITIDVQRTSYKKGVRDGYHRGRS
Ga0209990_1001049513	3300027816	Freshwater Lake	MANTDKLLLICIIGMIIGFIVVIVDVQKTAYKKGVRDGYHRGRSIKGQE
Ga0209230_1000293114	3300027836	Freshwater And Sediment	MSSLDKLFVISLVGIFIGFALVLLDVQKTAYNKGVRDGYHRGRSYKGQE
Ga0209230_105734273	3300027836	Freshwater And Sediment	ASGQIGKKMSSLDKLFVISLVGIFIGFALVLLDVQKTAYNKGVRDGYHRGRSYKGQE
Ga0238435_1014805	3300029349	Freshwater	MANTDKLLLICIIGMIIGFIVVIIDVQKSAYKKGVRDGYHRGRSIKGQE
Ga0238435_1060053	3300029349	Freshwater	MSSLDKLFILSLIGIAVGLIIVVIDVQKTAYDKGVRDGYHRGRSYKGQE
Ga0315900_101135394	3300031787	Freshwater	MSNTDKLLLICIIGMIAGFIVVIIDVQKTAYKKGVRDGYHRGRSYKGQE
Ga0315904_101011056	3300031951	Freshwater	MSNTDKLLLICIIGMLIGFAITVFDVQRRSYEKGVRDGYHRGRSFKGQE
Ga0315901_103818683	3300031963	Freshwater	MSNLDKLLLICIIGMVIGFAITIFDVQRRSYDKGLRDGWHRGRNFRGDLD
Ga0334982_0049037_789_938	3300033981	Freshwater	MSNTDKLLLICIIGMIIGFIIVIIDVQKSAYNKGVRDGYHRGRSIKGQE
Ga0335003_0005471_2600_2749	3300033995	Freshwater	MANTDKLLLICIIGMIIGFIIVIIDVQKTAYKKGVRDGYHRGRSYKGQE
Ga0334979_0003302_4188_4337	3300033996	Freshwater	MANTDKLLLICIIGMIIGFIIVIIDVQKTSYKRGVRDGYHRGRSYKGQE
Ga0334979_0081386_933_1082	3300033996	Freshwater	MSNTDKLLLICIIGMIIGFIIVIIDVQKSAYKKGVRDGYHRGRSIKGQE
Ga0334979_0148525_447_599	3300033996	Freshwater	MSNTDKLLLICIIGMVIGFAITIFDVQRRSYDKGLRDGYHRGRNFRGDLD
Ga0334986_0450189_291_461	3300034012	Freshwater	LAQLGKKMANTDKLLLICIIGMIIGFIIVIIDVQKTAYKKGVRDGYHRGRSIKGQE
Ga0334987_0796077_254_403	3300034061	Freshwater	MSNTDKLLLICIIGMIIGFIIVIIDVQKTAYNKGVRDGYHRGRSIKGQE
Ga0335027_0006389_2811_2960	3300034101	Freshwater	MANTDKLLLICIIGMIIGFIIVIIDVQKSAYNKGVRDGYHRGRSIKGQE
Ga0335031_0005187_7214_7363	3300034104	Freshwater	MSNTDKLLLICIIGMLFGFGVALYDVSKRSYEKGLREGYHRGRRVKGQE
Ga0335031_0019754_2382_2531	3300034104	Freshwater	MSNTDKLLLICIIGMIIGFIIVIIDVQKTSYKRGVRDGYHRGRSYKGQE
Ga0335063_0033667_1755_1904	3300034111	Freshwater	MSNTDKLLLICIIGMCIGFAITIFDVQRRSYEKGVRDGYHRGRSIKGQE
Ga0335063_0114931_1186_1335	3300034111	Freshwater	MANTDKLLLICIIGMIIGFIIVIIDVQKTAYKKGMRDGYHRGRSIKGQE
Ga0335054_0107249_488_637	3300034119	Freshwater	MANTDKLLLICIIGMIIGFIIVIIDVQKTSYKKGVRDGYHRGRSIKGQE
Ga0335065_0651341_299_448	3300034200	Freshwater	MTNTDKLLLICIIGMIIGFIIVIIDVQKTAYKKGVRDGYHRGRSIKGQE
Ga0335007_0151107_1515_1661	3300034283	Freshwater	ANTDKLLLICIIGMIIGFIIVIIDVQKTSYKRGVRDGYHRGRSYKGQE
Ga0335064_0131502_842_991	3300034357	Freshwater	MANTDKLLMICLIGMIVGFGIALFDVQKRSYEKGVRDGYHRGRSYKGQE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067734

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences