Metagenome / Metatranscriptome Family F067908

Basic Information
Family ID	F067908
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	46 residues
Representative Sequence	MNGVGKRRVELLIPMRTLLLVAAAIGVLAAFVAIGDTFLIVFVGI
Number of Associated Samples	106
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.75 %
% of genes near scaffold ends (potentially truncated)	81.60 %
% of genes from short scaffolds (< 2000 bps)	78.40 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Bacteria (66.400 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.400 % of family members)
Environment Ontology (ENVO)	Unclassified (32.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.400 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.36% β-sheet: 0.00% Coil/Unstructured: 61.64%
Feature Viewer

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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF07885	Ion_trans_2	24.00
PF03706	LPG_synthase_TM	13.60
PF04020	Phage_holin_4_2	4.00
PF06224	HTH_42	3.20
PF01699	Na_Ca_ex	3.20
PF04237	YjbR	3.20
PF00282	Pyridoxal_deC	2.40
PF12706	Lactamase_B_2	2.40
PF03631	Virul_fac_BrkB	2.40
PF13396	PLDc_N	1.60
PF13191	AAA_16	0.80
PF13091	PLDc_2	0.80
PF13489	Methyltransf_23	0.80
PF01569	PAP2	0.80
PF13278	Obsolete Pfam Family	0.80
PF13483	Lactamase_B_3	0.80
PF01741	MscL	0.80
PF00528	BPD_transp_1	0.80
PF00144	Beta-lactamase	0.80
PF02535	Zip	0.80
PF14023	DUF4239	0.80
PF04311	DUF459	0.80
PF08386	Abhydrolase_4	0.80
PF07690	MFS_1	0.80
PF08447	PAS_3	0.80
PF02559	CarD_CdnL_TRCF	0.80
PF13411	MerR_1	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	13.60
COG1950	Uncharacterized membrane protein YvlD, DUF360 family	Function unknown [S]	4.00
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	3.20
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	3.20
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	3.20
COG3214	DNA glycosylase YcaQ, repair of DNA interstrand crosslinks	Replication, recombination and repair [L]	3.20
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	2.40
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	2.40
COG0428	Zinc transporter ZupT	Inorganic ion transport and metabolism [P]	0.80
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.80
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.80
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.80
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.80
COG2845	Peptidoglycan O-acetyltransferase, SGNH hydrolase family	Cell wall/membrane/envelope biogenesis [M]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.40 %
Unclassified	root	N/A	33.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.40 %
Unclassified	root	N/A	33.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.40 %
Unclassified	root	N/A	33.60 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.60 %
Unclassified	root	N/A	33.60 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	9.60 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.80 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.80 %
Unclassified	root	N/A	33.60 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	9.60 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.20 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.60 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18.40 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	9.60 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.80 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.40 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.60 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	1.60 %
Chloroflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia	0.80 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.80 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.60 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	14.40 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	9.60 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.40 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.40 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	1.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.60 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.80 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.80 %
unclassified Chloroflexia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia	0.80 %
Miltoncostaeales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales	0.80 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.80 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.80 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	0.80 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.80 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.40 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.40 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	1.60 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	1.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.60 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.80 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.80 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.80 %
Miltoncostaeaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae	0.80 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.80 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	0.80 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.80 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.80 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.40 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.40 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	1.60 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.60 %
Miltoncostaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea	0.80 %
Jiangella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	0.80 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.80 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.80 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.80 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.80 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.80 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.40 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.40 %
unclassified Gaiella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella	1.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.60 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.80 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.80 %
Jiangella mangrovi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella mangrovi	0.80 %
Mesorhizobium sp. SCN 65-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. SCN 65-20	0.80 %
Miltoncostaea oceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	0.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.80 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.80 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.80 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.80 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.60 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	14.40 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	9.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.40 %
Gaiella sp. SCGC AG-212-M14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	1.60 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.60 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.80 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.80 %
Jiangella mangrovi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella mangrovi	0.80 %
Mesorhizobium sp. SCN 65-20	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. SCN 65-20	0.80 %
Miltoncostaea oceani	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	0.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.80 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.80 %
Chloroflexia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	0.80 %
Actinobacteria bacterium 13_1_20CM_3_68_9	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	0.80 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig540867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3595	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0619991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	533	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_11075602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Miltoncostaeales → Miltoncostaeaceae → Miltoncostaea → Miltoncostaea oceani	534	Open in IMG/M
3300000956\|JGI10216J12902_100596409	Not Available	572	Open in IMG/M
3300000956\|JGI10216J12902_102349017	Not Available	1133	Open in IMG/M
3300000956\|JGI10216J12902_105557866	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	784	Open in IMG/M
3300000956\|JGI10216J12902_110377371	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300002568\|C688J35102_120318460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. SCN 65-20	987	Open in IMG/M
3300003999\|Ga0055469_10174878	Not Available	661	Open in IMG/M
3300004020\|Ga0055440_10162908	Not Available	564	Open in IMG/M
3300004114\|Ga0062593_101165227	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	806	Open in IMG/M
3300004156\|Ga0062589_100209518	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300004156\|Ga0062589_102618309	All Organisms → cellular organisms → Bacteria → Terrabacteria group	524	Open in IMG/M
3300004157\|Ga0062590_102643482	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300004463\|Ga0063356_102560728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	783	Open in IMG/M
3300004479\|Ga0062595_101921644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300005093\|Ga0062594_101771547	Not Available	649	Open in IMG/M
3300005169\|Ga0066810_10058317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300005172\|Ga0066683_10110961	All Organisms → cellular organisms → Bacteria	1669	Open in IMG/M
3300005332\|Ga0066388_103103392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	849	Open in IMG/M
3300005332\|Ga0066388_103919387	Not Available	759	Open in IMG/M
3300005338\|Ga0068868_101970455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	554	Open in IMG/M
3300005353\|Ga0070669_101908267	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005354\|Ga0070675_101209755	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300005356\|Ga0070674_102100365	Not Available	515	Open in IMG/M
3300005364\|Ga0070673_101731679	All Organisms → cellular organisms → Bacteria → Terrabacteria group	592	Open in IMG/M
3300005459\|Ga0068867_100250330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1440	Open in IMG/M
3300005535\|Ga0070684_101183931	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	719	Open in IMG/M
3300005544\|Ga0070686_100908761	All Organisms → cellular organisms → Bacteria → Terrabacteria group	717	Open in IMG/M
3300005545\|Ga0070695_101403841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300005719\|Ga0068861_101534561	Not Available	654	Open in IMG/M
3300005981\|Ga0081538_10064650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2068	Open in IMG/M
3300006049\|Ga0075417_10669475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300006194\|Ga0075427_10032845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	856	Open in IMG/M
3300006196\|Ga0075422_10074936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	1265	Open in IMG/M
3300006806\|Ga0079220_10686431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300006844\|Ga0075428_100821650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	987	Open in IMG/M
3300006847\|Ga0075431_100640041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1044	Open in IMG/M
3300006969\|Ga0075419_10424124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	914	Open in IMG/M
3300009094\|Ga0111539_11647000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300009156\|Ga0111538_10764781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1223	Open in IMG/M
3300010036\|Ga0126305_10911712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300010038\|Ga0126315_10661405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	679	Open in IMG/M
3300010042\|Ga0126314_10098121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1986	Open in IMG/M
3300010043\|Ga0126380_10571327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	884	Open in IMG/M
3300010358\|Ga0126370_12086699	Not Available	556	Open in IMG/M
3300010359\|Ga0126376_10902595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	874	Open in IMG/M
3300010362\|Ga0126377_11591030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300010375\|Ga0105239_11561727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300011119\|Ga0105246_10063502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_9	2576	Open in IMG/M
3300011412\|Ga0137424_1087392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300012901\|Ga0157288_10104054	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300012908\|Ga0157286_10035499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1197	Open in IMG/M
3300012914\|Ga0157297_10440967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Chloroflexia → unclassified Chloroflexia → Chloroflexia bacterium	533	Open in IMG/M
3300012961\|Ga0164302_11108194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	626	Open in IMG/M
3300012961\|Ga0164302_11205699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	605	Open in IMG/M
3300012984\|Ga0164309_11202916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	636	Open in IMG/M
3300012989\|Ga0164305_10986690	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	715	Open in IMG/M
3300013296\|Ga0157374_10843407	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	933	Open in IMG/M
3300014270\|Ga0075325_1206125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300014326\|Ga0157380_12827482	All Organisms → cellular organisms → Bacteria → Terrabacteria group	552	Open in IMG/M
3300015200\|Ga0173480_10504271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300015371\|Ga0132258_11900028	Not Available	1499	Open in IMG/M
3300015372\|Ga0132256_101473514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300015372\|Ga0132256_101988632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300015372\|Ga0132256_103228629	Not Available	548	Open in IMG/M
3300015373\|Ga0132257_100186607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2450	Open in IMG/M
3300015373\|Ga0132257_100802547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	1175	Open in IMG/M
3300015373\|Ga0132257_103914027	Not Available	542	Open in IMG/M
3300015374\|Ga0132255_103295291	Not Available	688	Open in IMG/M
3300017792\|Ga0163161_10208622	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1508	Open in IMG/M
3300017965\|Ga0190266_10044539	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300017965\|Ga0190266_10110948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1151	Open in IMG/M
3300018052\|Ga0184638_1174168	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300018072\|Ga0184635_10037572	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1841	Open in IMG/M
3300018466\|Ga0190268_11303551	Not Available	613	Open in IMG/M
3300018469\|Ga0190270_11421944	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300018481\|Ga0190271_13084446	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	559	Open in IMG/M
3300018482\|Ga0066669_11358830	Not Available	643	Open in IMG/M
3300018920\|Ga0190273_11110240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	664	Open in IMG/M
3300023168\|Ga0247748_1059021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	592	Open in IMG/M
3300025925\|Ga0207650_11864056	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	508	Open in IMG/M
3300025926\|Ga0207659_11708593	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	536	Open in IMG/M
3300025929\|Ga0207664_11191668	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300025935\|Ga0207709_11166810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300025942\|Ga0207689_11482734	Not Available	567	Open in IMG/M
3300025961\|Ga0207712_11810433	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300026067\|Ga0207678_11142000	Not Available	690	Open in IMG/M
3300027743\|Ga0209593_10171311	Not Available	773	Open in IMG/M
3300027909\|Ga0209382_10938796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	907	Open in IMG/M
3300027915\|Ga0209069_10774575	Not Available	570	Open in IMG/M
3300028589\|Ga0247818_10749390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella mangrovi	679	Open in IMG/M
3300028717\|Ga0307298_10065761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1006	Open in IMG/M
3300028814\|Ga0307302_10709501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300030336\|Ga0247826_11425803	All Organisms → cellular organisms → Bacteria → Terrabacteria group	560	Open in IMG/M
3300031170\|Ga0307498_10041191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1200	Open in IMG/M
3300031908\|Ga0310900_11011409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	684	Open in IMG/M
3300031995\|Ga0307409_101451977	All Organisms → cellular organisms → Bacteria → Terrabacteria group	713	Open in IMG/M
3300032000\|Ga0310903_10508055	All Organisms → cellular organisms → Bacteria → Terrabacteria group	630	Open in IMG/M
3300032013\|Ga0310906_10645963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300032893\|Ga0335069_12456086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	540	Open in IMG/M
3300033551\|Ga0247830_11056151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	648	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.00%
Host-Associated	Host-Associated	32.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.60%
Plants	Host-Associated → Plants	32.00%
Aquatic	Environmental → Aquatic	6.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.80%
Sediment	Environmental → Aquatic → Sediment	4.00%
Marine	Environmental → Aquatic → Marine	1.60%
Freshwater	Environmental → Aquatic → Freshwater	0.80%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.40%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.00%
Loam	Environmental → Terrestrial → Soil → Loam	7.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.00%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.60%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.60%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.40%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.00%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.40%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.20%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.60%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.00%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.20%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.40%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.40%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.40%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.40%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.80%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.80%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300023168	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S064-202C-5	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F067908

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_14258260	2124908045	Soil	VQNYEVGMEGSTPKRELLIPIRTILVVSAAIGVLGAFVAIGSTFLIVFVGIFLGLVFE
ICChiseqgaiiDRAFT_06199911	3300000033	Soil	MNGVGKRRVELLIPMRTLLLVAAAIGVLAAFVAIGDTFLIVFVG
ICChiseqgaiiFebDRAFT_110756021	3300000363	Soil	VPSDRGSYSSPVSAPEKRRTEILIPVRTLLLVAAAVGVGIAFRAIGDTFLIVFVGIF
JGI10216J12902_1005964092	3300000956	Soil	MNPGGARRIELLVPMRTIVIVGAAIAVGLAFRAIGDTFLIVFVGIFLAL
JGI10216J12902_1023490171	3300000956	Soil	MEPHEPKRMALLLPMRTLLVVGAAVALGLAFVAIGETFLIVFVGIFLALVFE
JGI10216J12902_1044185781	3300000956	Soil	MESSIPKRALIVPIRTILVVSAAIGVLGAFVAIGSTFLIVFVGIFLGLVF
JGI10216J12902_1049524221	3300000956	Soil	MAGQVEKRELIIPIRTILVVSAAIGVLGAFVAIGDTFLIVFIGIFLGLVFE
JGI10216J12902_1055578662	3300000956	Soil	VRTSNTCGVNEGQSRRIELILPMRTILLVAATAMVLAAFAAIGDTFLIVFVGIFLAL
JGI10216J12902_1103773711	3300000956	Soil	MNGVGKRRVELLIPMRTLLLVAAAIGVLAAFVAIGDTFLIVFVGI
JGI10216J12902_1175263871	3300000956	Soil	MADQPAKRELIIPIRTILIVSAAIGVLGAFVAIGSTFLIVFVGIFLGLVF
C688J35102_1203184602	3300002568	Soil	MEEAPRRRVELYLPMRTLLIVAAAIAVMAAFVSIGDTFLIVFVGIFLAL
Ga0055469_101748781	3300003999	Natural And Restored Wetlands	VELLVPMRTVLVIAGAILVLAAFATIGDTFLIVFIGIFLGLVFE
Ga0055440_101629081	3300004020	Natural And Restored Wetlands	MESESARRVELLIPLRTLLLVAAAAGVIAAFRSIGDVFLIVFVGIFL
Ga0062593_1011652272	3300004114	Soil	MNEAQPRRIELMLPMRTVLLVAATVGVLAALASIGDTFLVVFIGIFL
Ga0062589_1002095181	3300004156	Soil	MESDQARRVELLVPVRTLVVVAAALGLIAAFWAIGDTFLIVFVGIFL
Ga0062589_1026183092	3300004156	Soil	MESPAERRVELLIPMRTLLLVLGALGLAVAFAAIGDTFLIVFVGIFL
Ga0062590_1026434821	3300004157	Soil	MNEAEPRTVSLLLPMRTVLLVAAATGVLLAFWAIGDTFLIVFIGIFLAL
Ga0063356_1025607281	3300004463	Arabidopsis Thaliana Rhizosphere	VEPAESRRVEIVLPMRTVLVVAAAIGLMVAFAAIGDTFLIVFVGIFLA
Ga0062595_1019216441	3300004479	Soil	MRTLLIVAAAIAVMAALVSIGDTFLIVFVGIFLALVFEYPVRF
Ga0062594_1017715471	3300005093	Soil	VEPRESRRVELLIPIRTLLIVFGAIAVMGAFVAIGSTFLIVFIGIFLGLVF
Ga0066807_10401321	3300005161	Soil	MAGSVKKRELLIPIRTILVVSAAIGVLGAFVAIGDTFLIVFIGI
Ga0066810_100583173	3300005169	Soil	MAGSVKKRELLIPIRTILVVSAAIGVLGAFVAIGDTFLIVFIGIFLALVFEYP
Ga0066683_101109613	3300005172	Soil	MDQTPKRRVEVLVPMRTLLVVAAAIAVMAAFVSIGDTFLIVFV
Ga0066388_1031033922	3300005332	Tropical Forest Soil	MQMPARRVELLLPIRTILVIGAAVAVFSAFRAIGDTFLIVFVGIFLALVFEYP
Ga0066388_1039193872	3300005332	Tropical Forest Soil	MSEGKPRRIELLLPIRTVLIVTATILLLAAFQAIGDTFLVVFVGIFLALVFE
Ga0066388_1058186722	3300005332	Tropical Forest Soil	MAEQAAKRELIIPIRTILIVSAAIGVLGAFVAIGDTFLIVFV
Ga0068868_1019704551	3300005338	Miscanthus Rhizosphere	MDRARKRRVELLLPMRTLLAVAATIGVLAAFVAIGDTFLIVFVG
Ga0070669_1019082672	3300005353	Switchgrass Rhizosphere	MDSRESRRVELVLPLRTVVLVVATIAVMAAFAAIGDTFLV
Ga0070675_1012097551	3300005354	Miscanthus Rhizosphere	MSDERRRTELLLPMRTVLLVAATIGVLAAFKEIGDTFLIVFVGIFLG
Ga0070674_1021003651	3300005356	Miscanthus Rhizosphere	MNDAEPRTVQLLLPMRTVLLVAAATGVLLAFWAIGDTFLI
Ga0070673_1017316791	3300005364	Switchgrass Rhizosphere	MRTLLLVLGALGLAVAFAAIGDTFLIVFVGIFLALVFEYPVRF
Ga0068867_1002503301	3300005459	Miscanthus Rhizosphere	VELVLPMRTVLLVAATAGVLAAFWAIGETFLVVFIGIFLALVFEYP
Ga0070684_1011839311	3300005535	Corn Rhizosphere	VNGERRRTELLLPMRTVLLVAATLGVLAAFREIGDTFLIVFVGIFL
Ga0070686_1009087612	3300005544	Switchgrass Rhizosphere	MESPAERRVELLIPMRTLLLVLGALGLAVAFAAIGDTFLIVFVGIFLALVFE
Ga0070695_1014038412	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VELVLPMRTVLLVAATAGVLAAFWAIGETFLVVFIGIFLALVFEY
Ga0066905_1000231917	3300005713	Tropical Forest Soil	MAGAEKRELIIPIRTILIVSAAIGILGAFVAIGSTFLIVFVGIFLGL
Ga0068861_1015345612	3300005719	Switchgrass Rhizosphere	VSSGEKLRTEIIIPMRMVLLVAAAVGVGIAFRAIGDTFLIVFVGIF
Ga0081538_100646501	3300005981	Tabebuia Heterophylla Rhizosphere	MDPVKTRRVELVLPMRTIILLVATVGVVAAFRAIGD
Ga0075417_106694752	3300006049	Populus Rhizosphere	MRTVLLVAAAAGVLAAFVAIGETFLIVFIGIFLALVFEY
Ga0075427_100328451	3300006194	Populus Rhizosphere	MSTPETRRVELLLPVRTLLLLALLVGLMVAFRAIGDTFLIVFIGVF
Ga0075422_100749363	3300006196	Populus Rhizosphere	MTEPRRTELLLPMRTVLLVAAAAGVLAAFVAIGETFLIVFIGI
Ga0074055_117224532	3300006573	Soil	MAGSVEKRELLIPVRTILIVSAAIGVLGAFVAIGDTFLIVFVGIFLGLVFE
Ga0074053_100234551	3300006575	Soil	MAGPAEKRELLIPIRTILIVSAAIGVLGAFVAIGD
Ga0074050_120896591	3300006577	Soil	MAGSVKKRELLIPIRTILVVSAAIGVLGAFVAIGDTFLIVF
Ga0079220_106864311	3300006806	Agricultural Soil	MSSPGERRVELLLPVRTIIVIGAAVAVFAAFEAIGSTFLIV
Ga0075428_1008216501	3300006844	Populus Rhizosphere	MRTVLLVAAAAGVLAAFVAIGETFLIVFIGIFLALVFEYPVRF
Ga0075431_1006400411	3300006847	Populus Rhizosphere	MRTVLLVAAAAGVLAAFVAIGETFLIVFIGIFLALVFEYPVRFLMAKT
Ga0075419_104241241	3300006969	Populus Rhizosphere	MRTVLLVAAAAGVLAAFVAIGETFLIVFIGIFLALVFEYPVRFL
Ga0111539_116470001	3300009094	Populus Rhizosphere	MDEPPKRRVELYLPIRTLLIVAAAVALMAAFVAIGDTFLIVFVGIFLGLV
Ga0111538_107647811	3300009156	Populus Rhizosphere	MTEPRRIELLLPMRTVLLVAAAAGVLAAFVAIGETFLIVFIGI
Ga0075423_132242312	3300009162	Populus Rhizosphere	MEAPERKRVELLLPMRTVLIVAAAVAVFAAFVAIGDTFLIVFIGIF
Ga0105249_131052241	3300009553	Switchgrass Rhizosphere	MAGPVEKREVLIPIRTILIVSAAIAVLGAFVAIGDTFLIVFVG
Ga0126305_109117121	3300010036	Serpentine Soil	MRAMGARRVELLLPVRTVLLVAAAVAVIAAFREIGDTFLIVFIGIF
Ga0126315_106614052	3300010038	Serpentine Soil	MDRARTRRVELLVPMRTLLVMAATIGVLAAFVAIG
Ga0126314_100981211	3300010042	Serpentine Soil	VEPRDTKRVELLIPIRTLLIVLGAIAVMGALVAIGSTFLIVFIGIFLG
Ga0126380_105713271	3300010043	Tropical Forest Soil	MEDSVPKRALIVPIRTILVVSAAIGVLGAFVAIGSTFLIVFVGIFLGLVFEFPVRFVIKR
Ga0134065_101738811	3300010326	Grasslands Soil	MEGSTPRRELLIPIRTIIVVSAAIGVLGAFVAIGSTFLIVFVGIFL
Ga0126370_120866991	3300010358	Tropical Forest Soil	MRTLLIVFAAIAVGAAFRAIGDTFLIVFVGIFLGFV
Ga0126376_109025951	3300010359	Tropical Forest Soil	VDPGGTRRIELLLPMRTIILVAATVGVIAAFRAIGDTFLIVFV
Ga0126377_115910301	3300010362	Tropical Forest Soil	MASDGTRRVELLVPVRTLIVVAAAIGVLAAFRTIGDTFLIVFVGIFLGLVFEFP
Ga0126377_115979953	3300010362	Tropical Forest Soil	MTDQTPKRELIIPIRTILIVSAAIGVLGAFVAIGDTFLIVFVGIFL
Ga0126377_116125903	3300010362	Tropical Forest Soil	MAEQAAKRELIIPIRTILIVSAAIGVLGAFVAIGDTFLIVFVGIFL
Ga0105239_115617272	3300010375	Corn Rhizosphere	MDEVPKRRVELLIPMRTLLLVAAAAAVAAAFIAIGDTFLIVFVGIFLALVF
Ga0105246_100635023	3300011119	Miscanthus Rhizosphere	VESRDTKRIELLLPIRTVLIAAAAIGVIFAFREIGSTFLIVFVGIFL
Ga0137424_10873921	3300011412	Soil	MTEPRRIELLLPMRTVLLVAATLGVLSAFVAIGDTFLIVFVGIFLAIVF
Ga0157288_101040541	3300012901	Soil	MRTVLIVAAAILILAAFAVIGESFLIVFVGIFLALVFEFPVRFVI
Ga0157286_100354993	3300012908	Soil	MRTVLIVAAAILILAAFAVIGESFLIVFVGIFLALVF
Ga0157297_104409672	3300012914	Soil	MEPAETRRRVELLLPVRTLFLVAAAIAIFGAFMAIGNTFLIVFVGIFL
Ga0164302_111081941	3300012961	Soil	MAEQAARRELIIPIRTILIVSAAIGVLGAFVAIGDTFLIVFVGIFLGL
Ga0164302_112056992	3300012961	Soil	MGAIGLMAAFAAIGDSFLIVFVGIFLALVFEYPTRFVMAKT
Ga0164309_112029162	3300012984	Soil	MDPAHNRRVELLLPMRTLLIIAAAIAVMAAFVAIGDTFLIVFI
Ga0164305_109866901	3300012989	Soil	MSDERRRTELLLPMRTVLLVAATIGVLAAFKEIGDTFLIVFVGIFLGLVFE
Ga0157374_108434072	3300013296	Miscanthus Rhizosphere	MRTVLLVAATLGVLAAFREIGDTFLIVFVGIFLGLVFEYPVRFVMLK
Ga0075325_12061252	3300014270	Natural And Restored Wetlands	MDPSSTKRVELVLPMRTVLLVAAAVGVATAFAVIGSTFLVVFVGIFLALVFEFP
Ga0157380_128274821	3300014326	Switchgrass Rhizosphere	MESPAERRVELLIPMRTLLLVLGALGLAVAFAAIGDTFLIVFVGIFLAL
Ga0173480_105042711	3300015200	Soil	MEPQPTKRVELYLPMRTVLIVAAAIVVLAAFAVIGDSFLIVFVGIFLALV
Ga0134089_102899771	3300015358	Grasslands Soil	MAGSVEKRELLIPIRTILIVSAAIGVLGAFVAIGDTFLIVF
Ga0132258_119000281	3300015371	Arabidopsis Rhizosphere	MNGAGKRRVELLIPMRTLLVVAAAIGVLAAFVAIGDTFLI
Ga0132256_1014735141	3300015372	Arabidopsis Rhizosphere	MRTIILVAATVGIIAAFRAIGDTFLIVFVGIFLALVFEYPVRF
Ga0132256_1019886321	3300015372	Arabidopsis Rhizosphere	MDQGGTRRIELLLPMRTIILLAATAGLLVAFKAIGDTFLIVFVG
Ga0132256_1032286292	3300015372	Arabidopsis Rhizosphere	MENGGTRRIELLLPMRTIILLAATVGVLAAFRAIGDTFLIVFVGI
Ga0132257_1001866076	3300015373	Arabidopsis Rhizosphere	MESAGSRRVELFVPVRTLLVVGAAVAVAAAFKAIGDTFLIVFIGIFLALVFE
Ga0132257_1008025473	3300015373	Arabidopsis Rhizosphere	MDPARNRRVELLLPMRTLLIIAAAIAVMAAFVAIGDTFLIVFIGVFLAL
Ga0132257_1039140271	3300015373	Arabidopsis Rhizosphere	MEVPERRRVDLYVPVRTLVVVAAAIAVLAAFQAIGDTFLIVFVGIFLAL
Ga0132255_1032952912	3300015374	Arabidopsis Rhizosphere	MENGGTRRIELLLPMRTIILLAATVGVLAAFRAIGDTFLIVFVGIFL
Ga0163161_102086221	3300017792	Switchgrass Rhizosphere	MSDERRRTELLLPMRTVLLVAATIGVLAAFKEIGDTFL
Ga0190266_100445393	3300017965	Soil	MESPEPRRIELLLPMRTVIVVAAAIALMAAFAAIGDTFLIVFIGIFLAFVFE
Ga0190266_101109481	3300017965	Soil	MEPAESRRVELILPMRTVIVVAAAIGLMVAFAAIGDTFLIVFIGIFLAFV
Ga0184638_11741681	3300018052	Groundwater Sediment	MESRDSRRVELVLPLRTVVLVVATLSVMVAFAAIGDTFLLVFVGIFL
Ga0184635_100375723	3300018072	Groundwater Sediment	MEAQSSPKRVELFIPLRTILLVAAAIAVMAAFVAIADAFLIVFVGIFLALVF
Ga0184625_102164731	3300018081	Groundwater Sediment	MAGQVEKRELIIPIRTILVVSAAIGVLGAFVAIGDTFLIVFVGIF
Ga0190268_113035511	3300018466	Soil	MESPEPRRIELLLPMRTVIVVAAAIALMAAFAAIGDTFLIVFIGIF
Ga0190270_114219441	3300018469	Soil	MESRESRRLELLLPLRTVVLVVAAIAVMAAFAAIGDTFLLV
Ga0190271_130844461	3300018481	Soil	MNGEGRRVELLLPMRTVLLVAATLGVLAAFREIGDT
Ga0066669_113588302	3300018482	Grasslands Soil	MRTLLIVGAAIALGAAFVSIGDTFLIVFVGIFLALVFESPVRFVIART
Ga0066669_115781072	3300018482	Grasslands Soil	MEGSTPRRELLIPIRTIIVVSAAIGVLGAFVAIGSTFLIVFV
Ga0190273_111102401	3300018920	Soil	MEPAESRRVELILPMRTVIVVAAAIGLMAAFAAIGDTFLIVFIGI
Ga0193697_11329351	3300020005	Soil	MAGQVEKRELLIPIRTILVVSAAIGILGAFVAIGDTFLIVFVGIFLGLVFE
Ga0247748_10590212	3300023168	Soil	VPVRTLLVVSATIGLLAAFVAIGDTFLIVFVGIFLALVFEYPVRFV
Ga0207650_118640562	3300025925	Switchgrass Rhizosphere	VNGERRRTELLLPMRTVLLVAATIGVLAAFKEIGDTFLIVFVGI
Ga0207659_117085932	3300025926	Miscanthus Rhizosphere	MSDERRRTELLLPMRTVLLVAATIGVLAAFKEIGDTFLIVFVGIFLGLVF
Ga0207664_111916681	3300025929	Agricultural Soil	MRTVLLVAAAAAVLAAFVAIGDTFLIVFVGIFLGLVFE
Ga0207709_111668102	3300025935	Miscanthus Rhizosphere	MRTVLLVAATLGVLAAFVAIGDTFLIVFVGIFLGLV
Ga0207689_114827341	3300025942	Miscanthus Rhizosphere	LLLPMRTLLAVAATIGVLAAFVAIGDTFLIVFVGIFLALVFEYPV
Ga0207712_118104331	3300025961	Switchgrass Rhizosphere	MSDERRRTELLLPMRTVLLVAATLGVLAAFREIGDTFLIVFVG
Ga0207678_111420001	3300026067	Corn Rhizosphere	MSDERRRTELLLPMRTVLLVAATIGVLAAFKEIGDTFLIVFVGIFLGLVFEYP
Ga0209593_101713111	3300027743	Freshwater Sediment	MEPPEHMNAGGARRVELLLPMRTVLLVAATAGVLAAFWAIGDTFLVI
Ga0209382_109387963	3300027909	Populus Rhizosphere	MRTVLLVAAAAGVLAAFVAIGETFLIVFIGIFLALVF
Ga0209069_107745752	3300027915	Watersheds	MRTLLLVAAAILVLAAFWKIGDTFLIVFVGIFMGLVFEYPVRFVMKKTHWGRGLAAT
Ga0247818_107493902	3300028589	Soil	MDPVGTRRVELVLPMRTILLVGAAVAVFAAFKAIGSTFLIVFVGIFLALV
Ga0307298_100657613	3300028717	Soil	MESPAERRVELLLPMRTLLLVLGVIGLAVAFAAIGDTFLIVFVGIFLALVF
Ga0307317_102616042	3300028720	Soil	MAGQVEKRELLIPIRTILVVSAAIGVLGAFVAIGDTFLIVFVGIFLGLV
Ga0307299_102366381	3300028793	Soil	MSVMEPHRPKRVELLLPVRTVLVIGAAIAVMGAFVAIGDTFLLVFVGI
Ga0307284_100127301	3300028799	Soil	MDAPPSKRVELLLPIRTVLILVGAIAIMAAFKAIGDTFLVV
Ga0307302_101156063	3300028814	Soil	MAGQVEKRELLIPIRTILVVSAAIGVLGAFVAIGDT
Ga0307302_107095012	3300028814	Soil	VTSVDPTAPKRVELLLPMRTLLLIAAAVGVIAAFQAIGDTFLIVFVGI
Ga0307312_109749392	3300028828	Soil	MAGQVEKRELLIPIRTILVVSAAIGVLGAFVAIGDTFLIVFIGI
Ga0247826_114258031	3300030336	Soil	MDRARKRRVELLLPMRTLLAVAATIGVLAAFVAIGDTFLIV
Ga0307498_100411913	3300031170	Soil	MDPGGTRRIELLLPMRTIILVAATIGVFGAFRAIGDTFLIVFVGIFLA
Ga0310900_110114091	3300031908	Soil	MRTVLIVAATIGVLAAFVAIGDTFLIVFIGIFLALVFEYPVRFLMSKTNFSRGVAAAV
Ga0307409_1014519772	3300031995	Rhizosphere	MRTLLVMAATIGVLAAFVAIGDTFLIVFVGIFLALVFEYPVRFVMRKTHMS
Ga0310903_105080552	3300032000	Soil	LLLPMRTLLAVAATIGVLAAFVAIGDTFLIVFVGIFLALVFEYP
Ga0310906_106459633	3300032013	Soil	MEPHPTKRVELYLPMRTVLIVAAAILILAAFAVIGESFLIV
Ga0335069_124560861	3300032893	Soil	VNPTRGRRIELLIPMRTLLLVAAAVAVLAALMEIGDTFLVVFVGIFLG
Ga0247830_110561511	3300033551	Soil	VESRESRRTELILPMRTVLLVAAAIGVMVAFAAIGDTFLIVFVGIFLAFVFE

Hidden Markov Model


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